Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 2 cut(s) | 40, 158 |
| AoxI | GGCC | 2 cut(s) | 60, 168 |
| AxyI | CCTNAGG | 1 cut(s) | 21 |
| BanII | GRGCYC | 1 cut(s) | 153 |
| BmsI | GCATC | 1 cut(s) | 138 |
| BsaJI | CCNNGG | 1 cut(s) | 195 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 40, 158 |
| Bse21I | CCTNAGG | 1 cut(s) | 21 |
| BseDI | CCNNGG | 1 cut(s) | 195 |
| BseGI | GGATG | 2 cut(s) | 31, 49 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 40, 158 |
| BseMII | CTCAG | 1 cut(s) | 35 |
| BshFI | GGCC | 2 cut(s) | 62, 170 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 40, 158 |
| BsnI | GGCC | 2 cut(s) | 62, 170 |
| Bsp1286I | GDGCHC | 1 cut(s) | 153 |
| BspANI | GGCC | 2 cut(s) | 62, 170 |
| BspCNI | CTCAG | 1 cut(s) | 34 |
| BspQI | GCTCTTC | 1 cut(s) | 141 |
| BssECI | CCNNGG | 1 cut(s) | 195 |
| BssT1I | CCWWGG | 1 cut(s) | 195 |
| Bst6I | CTCTTC | 1 cut(s) | 141 |
| BstDEI | CTNAG | 2 cut(s) | 21, 157 |
| BstF5I | GGATG | 2 cut(s) | 31, 49 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 178 |
| Bsu36I | CCTNAGG | 1 cut(s) | 21 |
| BsuRI | GGCC | 2 cut(s) | 62, 170 |
| BtsCI | GGATG | 2 cut(s) | 31, 49 |
| CviJI | RGCY | 5 cut(s) | 5, 62, 140, 151, 170 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 62, 140, 151, 170 |
| DdeI | CTNAG | 2 cut(s) | 21, 157 |
| Eam1104I | CTCTTC | 1 cut(s) | 141 |
| EarI | CTCTTC | 1 cut(s) | 141 |
| Eco130I | CCWWGG | 1 cut(s) | 195 |
| Eco24I | GRGCYC | 1 cut(s) | 153 |
| Eco81I | CCTNAGG | 1 cut(s) | 21 |
| EcoT14I | CCWWGG | 1 cut(s) | 195 |
| EcoT38I | GRGCYC | 1 cut(s) | 153 |
| ErhI | CCWWGG | 1 cut(s) | 195 |
| FaiI | YATR | 4 cut(s) | 98, 111, 122, 179 |
| FokI | GGATG | 2 cut(s) | 38, 56 |
| FriOI | GRGCYC | 1 cut(s) | 153 |
| HaeIII | GGCC | 2 cut(s) | 62, 170 |
| HincII | GTYRAC | 1 cut(s) | 91 |
| HindII | GTYRAC | 1 cut(s) | 91 |
| HinfI | GANTC | 2 cut(s) | 51, 209 |
| Hpy166II | GTNNAC | 1 cut(s) | 91 |
| Hpy188I | TCNGA | 1 cut(s) | 208 |
| Hpy188III | TCNNGA | 1 cut(s) | 23 |
| Hpy8I | GTNNAC | 1 cut(s) | 91 |
| HpyF3I | CTNAG | 2 cut(s) | 21, 157 |
| LguI | GCTCTTC | 1 cut(s) | 141 |
| LpnPI | CCDG | 1 cut(s) | 8 |
| LweI | GCATC | 1 cut(s) | 138 |
| MaeIII | GTNAC | 1 cut(s) | 226 |
| MboII | GAAGA | 2 cut(s) | 3, 158 |
| MhlI | GDGCHC | 1 cut(s) | 153 |
| MluCI | AATT | 1 cut(s) | 73 |
| MnlI | CCTC | 5 cut(s) | 30, 34, 40, 52, 73 |
| MseI | TTAA | 4 cut(s) | 72, 134, 221, 241 |
| PciSI | GCTCTTC | 1 cut(s) | 141 |
| PfeI | GAWTC | 2 cut(s) | 51, 209 |
| SapI | GCTCTTC | 1 cut(s) | 141 |
| SaqAI | TTAA | 4 cut(s) | 72, 134, 221, 241 |
| SduI | GDGCHC | 1 cut(s) | 153 |
| SetI | ASST | 1 cut(s) | 163 |
| SfaNI | GCATC | 1 cut(s) | 138 |
| SgeI | CNNG | 6 cut(s) | 35, 76, 137, 164, 208, 229 |
| Sse9I | AATT | 1 cut(s) | 73 |
| StyI | CCWWGG | 1 cut(s) | 195 |
| TaqI | TCGA | 2 cut(s) | 14, 216 |
| TasI | AATT | 1 cut(s) | 73 |
| TfiI | GAWTC | 2 cut(s) | 51, 209 |
| Tru1I | TTAA | 4 cut(s) | 72, 134, 221, 241 |
| Tru9I | TTAA | 4 cut(s) | 72, 134, 221, 241 |
| TspDTI | ATGAA | 2 cut(s) | 42, 159 |