Rroxscaffold_4G00308680

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000073
Physical Location & Seq
Forward (+)
30281166 .. 30282314
1149 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00308680.1

Sequence Viewer

Length: 1017 bp
ATGTCCTCTCATGACCATCTTGCTTCCCGGTTGGAAAACACTTGCCGCCTAGATGAGGTTGAAAATGGTGTCTCTCTCCTTGGAGCACTCATTGCGGATGTCGTACCAAACATTGGTGGCATAAAGGGATCCCTCGGAACCTCCCGGAGGGACACGGGTGCGATTAAGATAGCTCACCCGCACCACAACATCTTCTCCATAAAGGCCCCCCTCATGCCCGCCTCTACTCTTCCGGAAGGTGGTCCCCGGCATGTAGACAACATGCGATTCAACGTGGTTAAATGGCTCCCCAACCTCACCATTAGTGATATTCACTTCCACAAAGTCCGGCACCGGTCAAGGTCCTCATGGATTCCGGAAACCCATTTCCTACCGGCTTCGGCTCCCCTCTCAACGAATACACAAGCACTAGGGTGGATTACGGGGTTATCAATCCGGAAGAAGGAGAACCGAGAGAATATCCGGTACGGACCTTGGATGAAGAGGCGTTCCATTCCAAGAAACACCGCCTTGGCTCGACCGGCCGCAAGGGTTCATCGGAGAAAGCCGAAAAGCAAGCGAGTCACGGGTTCATGTTCAAACTCTCCTTTCGAGTCACATGCTAACCCTAGCAGAGACCGACCCACGAGGTCGAACGAATCATCGGTGATAGTAAGTGACGTATCTTTCCCTCCGATTATCGAGCCAATTGATGTGGACTCATCACCCCAAAATTCAAATCCTAAAGATTCCCTCGTGGTTCTCCAAGGACCAAACTCCTATCCCGCCTCCCCGCCCCACATACATCCCCCTCTCGTAAAGGTAAACCCTTACCCGAGTCCAAATTGGATGAAGCTAGCCGTCACAACTACAAAAACGCATGTCGAATGGACAAAGAAAGTTCTTCATCCCGACCCAATCCACCCTAAGCCATCCAACAGCCCATCTCATACCCGGTCTCACCACCACCCACATAGACAATCGGGACCCCTCATTCTATCTAAACGGGTGACTTGCCATGCCCGTCACCACATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4 zf-RING_2

Protein Analysis

338

Amino Acids

37.67

Weight (kDa)

10.64

Isoelectric Point (pI)

60.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 330
AccB7I CCANNNNNTGG 1 cut(s) 113
AccI GTMKAC 1 cut(s) 255
AccIII TCCGGA 3 cut(s) 232, 355, 435
AciI CCGC 8 cut(s) 46, 95, 179, 219, 507, 525, 765, 773
AclWI GGATC 2 cut(s) 123, 136
AcoI YGGCCR 1 cut(s) 522
AcsI RAATTY 1 cut(s) 712
AfaI GTAC 2 cut(s) 105, 467
AfiI CCNNNNNNNGG 5 cut(s) 55, 113, 147, 239, 442
AflIII ACRYGT 1 cut(s) 1011
AgeI ACCGGT 1 cut(s) 333
AgsI TTSAA 4 cut(s) 62, 271, 579, 717
AleI CACNNNNGTG 1 cut(s) 412
AluBI AGCT 2 cut(s) 173, 835
AluI AGCT 2 cut(s) 173, 835
Alw21I GWGCWC 1 cut(s) 88
Alw26I GTCTC 3 cut(s) 76, 609, 942
AlwI GGATC 2 cut(s) 123, 136
Ama87I CYCGRG 1 cut(s) 814
Aor13HI TCCGGA 3 cut(s) 232, 355, 435
AoxI GGCC 2 cut(s) 204, 522
ApoI RAATTY 1 cut(s) 712
AsiGI ACCGGT 1 cut(s) 333
AspS9I GGNCC 6 cut(s) 205, 242, 342, 470, 749, 965
AsuC2I CCSGG 4 cut(s) 28, 145, 247, 934
AsuHPI GGTGA 7 cut(s) 167, 289, 658, 696, 932, 998, 1000
AsuNHI GCTAGC 1 cut(s) 835
AvaI CYCGRG 1 cut(s) 814
AvaII GGWCC 5 cut(s) 242, 342, 470, 749, 965
BamHI GGATCC 1 cut(s) 128
BanI GGYRCC 1 cut(s) 330
BauI CACGAG 2 cut(s) 625, 734
Bbv12I GWGCWC 1 cut(s) 88
BccI CCATC 3 cut(s) 24, 919, 931
BceAI ACGGC 1 cut(s) 824
BcgI CGANNNNNNTGC 2 cut(s) 581, 615
BcnI CCSGG 4 cut(s) 28, 145, 247, 934
BcoDI GTCTC 3 cut(s) 76, 609, 942
BfaI CTAG 4 cut(s) 50, 410, 609, 836
BisI GCNGC 2 cut(s) 46, 525
BlsI GCNGC 2 cut(s) 47, 526
Bme1390I CCNGG 4 cut(s) 28, 145, 247, 934
Bme18I GGWCC 5 cut(s) 242, 342, 470, 749, 965
BmeT110I CYCGRG 1 cut(s) 814
BmgT120I GGNCC 6 cut(s) 205, 242, 342, 470, 749, 965
BmiI GGNNCC 9 cut(s) 130, 139, 207, 244, 287, 332, 384, 966, 967
BmrFI CCNGG 4 cut(s) 28, 145, 247, 934
BmtI GCTAGC 1 cut(s) 839
Bpu10I CCTNAGC 1 cut(s) 906
BpuMI CCSGG 4 cut(s) 28, 145, 247, 934
BsaI GGTCTC 2 cut(s) 609, 942
BsaJI CCNNGG 6 cut(s) 79, 133, 245, 473, 510, 745
BsaWI WCCGGW 5 cut(s) 232, 333, 355, 435, 462
BsaXI ACNNNNNCTCC 2 cut(s) 179, 209
Bsc4I CCNNNNNNNGG 5 cut(s) 55, 113, 147, 239, 442
Bse118I RCCGGY 3 cut(s) 333, 373, 520
Bse3DI GCAATG 1 cut(s) 90
BseAI TCCGGA 3 cut(s) 232, 355, 435
BseDI CCNNGG 6 cut(s) 79, 133, 245, 473, 510, 745
BseGI GGATG 6 cut(s) 103, 483, 784, 834, 886, 911
BseLI CCNNNNNNNGG 5 cut(s) 55, 113, 147, 239, 442
BseMI GCAATG 1 cut(s) 90
BseX3I CGGCCG 1 cut(s) 522
Bsh1285I CGRYCG 2 cut(s) 521, 525
BshFI GGCC 2 cut(s) 206, 524
BshNI GGYRCC 1 cut(s) 330
BshTI ACCGGT 1 cut(s) 333
BsiEI CGRYCG 2 cut(s) 521, 525
BsiHKAI GWGCWC 1 cut(s) 88
BsiHKCI CYCGRG 1 cut(s) 814
BslFI GGGAC 3 cut(s) 164, 228, 978
BslI CCNNNNNNNGG 5 cut(s) 55, 113, 147, 239, 442
BsmAI GTCTC 3 cut(s) 76, 609, 942
BsmFI GGGAC 3 cut(s) 164, 228, 978
BsnI GGCC 2 cut(s) 206, 524
Bso31I GGTCTC 2 cut(s) 609, 942
BsoBI CYCGRG 1 cut(s) 814
Bsp1286I GDGCHC 1 cut(s) 88
Bsp13I TCCGGA 3 cut(s) 232, 355, 435
Bsp143I GATC 1 cut(s) 128
BspACI CCGC 8 cut(s) 46, 95, 179, 219, 507, 525, 765, 773
BspANI GGCC 2 cut(s) 206, 524
BspEI TCCGGA 3 cut(s) 232, 355, 435
BspHI TCATGA 1 cut(s) 10
BspLI GGNNCC 9 cut(s) 130, 139, 207, 244, 287, 332, 384, 966, 967
BspOI GCTAGC 1 cut(s) 839
BspPI GGATC 2 cut(s) 123, 136
BspT107I GGYRCC 1 cut(s) 330
BspTNI GGTCTC 2 cut(s) 609, 942
BsrDI GCAATG 1 cut(s) 90
BsrFI RCCGGY 3 cut(s) 333, 373, 520
BssAI RCCGGY 3 cut(s) 333, 373, 520
BssECI CCNNGG 6 cut(s) 79, 133, 245, 473, 510, 745
BssMI GATC 1 cut(s) 128
BssSI CACGAG 2 cut(s) 625, 734
BssT1I CCWWGG 4 cut(s) 79, 473, 510, 745
Bst2BI CACGAG 2 cut(s) 625, 734
Bst6I CTCTTC 2 cut(s) 234, 476
BstAPI GCANNNNNTGC 1 cut(s) 92
BstC8I GCNNGC 3 cut(s) 219, 557, 837
BstDEI CTNAG 1 cut(s) 906
BstENI CCTNNNNNAGG 2 cut(s) 53, 145
BstF5I GGATG 6 cut(s) 103, 483, 784, 834, 886, 911
BstKTI GATC 1 cut(s) 131
BstMAI GTCTC 3 cut(s) 76, 609, 942
BstMBI GATC 1 cut(s) 128
BstMCI CGRYCG 2 cut(s) 521, 525
BstMWI GCNNNNNNNGC 2 cut(s) 92, 521
BstNSI RCATGY 5 cut(s) 254, 265, 602, 863, 1015
BstSCI CCNGG 4 cut(s) 26, 143, 245, 932
BstX2I RGATCY 1 cut(s) 128
BstYI RGATCY 1 cut(s) 128
BstZI CGGCCG 1 cut(s) 522
BsuRI GGCC 2 cut(s) 206, 524
BtsCI GGATG 6 cut(s) 103, 483, 784, 834, 886, 911
Cac8I GCNNGC 3 cut(s) 219, 557, 837
CciI TCATGA 1 cut(s) 10
Cfr10I RCCGGY 3 cut(s) 333, 373, 520
Cfr13I GGNCC 6 cut(s) 205, 242, 342, 470, 749, 965
Csp6I GTAC 2 cut(s) 104, 466
CspAI ACCGGT 1 cut(s) 333
CspCI CAANNNNNGTGG 2 cut(s) 675, 710
CviQI GTAC 2 cut(s) 104, 466
DdeI CTNAG 1 cut(s) 906
DpnI GATC 1 cut(s) 130
DpnII GATC 1 cut(s) 128
EaeI YGGCCR 1 cut(s) 522
EagI CGGCCG 1 cut(s) 522
Eam1104I CTCTTC 2 cut(s) 234, 476
EarI CTCTTC 2 cut(s) 234, 476
EclXI CGGCCG 1 cut(s) 522
Eco130I CCWWGG 4 cut(s) 79, 473, 510, 745
Eco31I GGTCTC 2 cut(s) 609, 942
Eco47I GGWCC 5 cut(s) 242, 342, 470, 749, 965
Eco52I CGGCCG 1 cut(s) 522
Eco88I CYCGRG 1 cut(s) 814
EcoNI CCTNNNNNAGG 2 cut(s) 53, 145
EcoO109I RGGNCCY 3 cut(s) 205, 342, 965
EcoT14I CCWWGG 4 cut(s) 79, 473, 510, 745
ErhI CCWWGG 4 cut(s) 79, 473, 510, 745
FaqI GGGAC 3 cut(s) 164, 228, 978
FauI CCCGC 4 cut(s) 186, 226, 772, 780
FblI GTMKAC 1 cut(s) 255
Fnu4HI GCNGC 2 cut(s) 46, 525
FokI GGATG 6 cut(s) 110, 490, 771, 841, 873, 898
Fsp4HI GCNGC 2 cut(s) 46, 525
FspBI CTAG 4 cut(s) 50, 410, 609, 836
GluI GCNGC 2 cut(s) 46, 525
HaeIII GGCC 2 cut(s) 206, 524
HinfI GANTC 8 cut(s) 267, 352, 561, 593, 638, 698, 728, 817
HphI GGTGA 7 cut(s) 167, 289, 658, 696, 932, 998, 1000
Hpy166II GTNNAC 3 cut(s) 256, 697, 805
Hpy188I TCNGA 3 cut(s) 137, 540, 675
Hpy188III TCNNGA 6 cut(s) 11, 233, 356, 436, 890, 963
Hpy8I GTNNAC 3 cut(s) 256, 697, 805
HpyAV CCTTC 2 cut(s) 230, 436
HpyCH4IV ACGT 2 cut(s) 273, 660
HpyF10VI GCNNNNNNNGC 2 cut(s) 92, 521
HpyF3I CTNAG 1 cut(s) 906
HpySE526I ACGT 2 cut(s) 273, 660
KflI GGGWCCC 1 cut(s) 965
Kpn2I TCCGGA 3 cut(s) 232, 355, 435
Kzo9I GATC 1 cut(s) 128
LmnI GCTCC 3 cut(s) 83, 291, 388
MaeI CTAG 4 cut(s) 50, 410, 609, 836
MaeII ACGT 2 cut(s) 273, 660
MaeIII GTNAC 6 cut(s) 562, 594, 656, 841, 988, 1004
MalI GATC 1 cut(s) 130
MboI GATC 1 cut(s) 128
MboII GAAGA 5 cut(s) 184, 221, 451, 493, 875
MfeI CAATTG 1 cut(s) 687
MflI RGATCY 1 cut(s) 128
MhlI GDGCHC 1 cut(s) 88
MluCI AATT 3 cut(s) 687, 712, 823
MlyI GAGTC 4 cut(s) 570, 602, 692, 826
MmeI TCCRAC 2 cut(s) 12, 939
MroI TCCGGA 3 cut(s) 232, 355, 435
MseI TTAA 2 cut(s) 165, 279
MslI CAYNNNNRTG 1 cut(s) 412
MspR9I CCNGG 4 cut(s) 28, 145, 247, 934
MunI CAATTG 1 cut(s) 687
MwoI GCNNNNNNNGC 2 cut(s) 92, 521
NciI CCSGG 4 cut(s) 28, 145, 247, 934
NdeII GATC 1 cut(s) 128
NheI GCTAGC 1 cut(s) 835
NlaIV GGNNCC 9 cut(s) 130, 139, 207, 244, 287, 332, 384, 966, 967
NmuCI GTSAC 6 cut(s) 562, 594, 656, 841, 988, 1004
NspI RCATGY 5 cut(s) 254, 265, 602, 863, 1015
OliI CACNNNNGTG 1 cut(s) 412
PagI TCATGA 1 cut(s) 10
PciI ACATGT 1 cut(s) 1011
PfeI GAWTC 4 cut(s) 267, 352, 638, 728
PflMI CCANNNNNTGG 1 cut(s) 113
PfoI TCCNGGA 1 cut(s) 143
PinAI ACCGGT 1 cut(s) 333
PkrI GCNGC 2 cut(s) 47, 526
PleI GAGTC 4 cut(s) 569, 601, 692, 825
PpsI GAGTC 4 cut(s) 569, 601, 692, 825
PpuMI RGGWCCY 2 cut(s) 342, 965
PscI ACATGT 1 cut(s) 1011
Psp5II RGGWCCY 2 cut(s) 342, 965
PspN4I GGNNCC 9 cut(s) 130, 139, 207, 244, 287, 332, 384, 966, 967
PspPI GGNCC 6 cut(s) 205, 242, 342, 470, 749, 965
PspPPI RGGWCCY 2 cut(s) 342, 965
PsuI RGATCY 1 cut(s) 128
RsaI GTAC 2 cut(s) 105, 467
RsaNI GTAC 2 cut(s) 104, 466
RseI CAYNNNNRTG 1 cut(s) 412
SaqAI TTAA 2 cut(s) 165, 279
SatI GCNGC 2 cut(s) 46, 525
Sau3AI GATC 1 cut(s) 128
Sau96I GGNCC 6 cut(s) 205, 242, 342, 470, 749, 965
SchI GAGTC 4 cut(s) 570, 602, 692, 826
ScrFI CCNGG 4 cut(s) 28, 145, 247, 934
SduI GDGCHC 1 cut(s) 88
SinI GGWCC 5 cut(s) 242, 342, 470, 749, 965
SmiMI CAYNNNNRTG 1 cut(s) 412
Sse9I AATT 3 cut(s) 687, 712, 823
SsiI CCGC 8 cut(s) 46, 95, 179, 219, 507, 525, 765, 773
SspMI CTAG 4 cut(s) 50, 410, 609, 836
StyD4I CCNGG 4 cut(s) 26, 143, 245, 932
StyI CCWWGG 4 cut(s) 79, 473, 510, 745
TaiI ACGT 2 cut(s) 276, 663
TaqI TCGA 5 cut(s) 517, 591, 632, 681, 864
TaqII GACCGA 1 cut(s) 633
TasI AATT 3 cut(s) 687, 712, 823
TauI GCSGC 2 cut(s) 48, 527
TfiI GAWTC 4 cut(s) 267, 352, 638, 728
Tru1I TTAA 2 cut(s) 165, 279
Tru9I TTAA 2 cut(s) 165, 279
TseFI GTSAC 6 cut(s) 562, 594, 656, 841, 988, 1004
Tsp45I GTSAC 6 cut(s) 562, 594, 656, 841, 988, 1004
TspDTI ATGAA 5 cut(s) 494, 524, 561, 845, 875
TspGWI ACGGA 1 cut(s) 483
Van91I CCANNNNNTGG 1 cut(s) 113
VpaK11BI GGWCC 5 cut(s) 242, 342, 470, 749, 965
XagI CCTNNNNNAGG 2 cut(s) 53, 145
XapI RAATTY 1 cut(s) 712
XceI RCATGY 5 cut(s) 254, 265, 602, 863, 1015
XmiI GTMKAC 1 cut(s) 255
XspI CTAG 4 cut(s) 50, 410, 609, 836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.