Rh3BG343500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000073
Physical Location & Seq
Forward (+)
37123987 .. 37125329
1343 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG343500.1

Sequence Viewer

Length: 1215 bp
ATGACGGGGATCGAGGTTCGGATCATTTTCATGGACAGTGCTTCCACGCACGCCCGGCAAAACAGTCAACAATTTCCATCCTCCCACTCGAATTCTCAACCCCTGCTCCAAGCTCCGAATCTGTTTTTCACCGCCAACCGGACTCATCATCAATCGTCCCTTGTGATATTTGACAAAACTCCATCGCCAAAAAGGGAGGTGCACTTACCCGGTCCTTTGCCTATCACTCCAGTGGCCTCTTCTTCCCATGGTCCTCTTGACAAAGGTAAATCTATGATGGTTTTTGATGATGAACTAGTTGTGGATGCAGGCCAAGATGGAAATTCTGGGTGTTTATACAGATCTATCCCAACTCTGTTCCCCACCTTGGGCCCCTCGGGAGATATCAATATGGGACACACCCAATTTATCTTTGACAACTCATTTAACTTTTCAAGTTTGCCCATCAGCACACTTAATGCACTAGTGGTTTCTAACCCAACACCAAATCCAAATCAGCCATTTACACCTACACAACCCACAACCATATCACCTGCACCACCACAAAATGATAATACCATTGCTGGGATTGCATCATTCCTTGATCAACTCCGACTAAAGCGTTTGGCTGATGACATCCCAAAACAATCTGATTCGAAGAGTAAGAAATCAAAGCTTAGATCATTATCCTCTTTTGATCCAGATCTATCTCTAGCCTCTGCTTTGGATCTTCACCAAGCCATTTTGCCTTCTTCTGGGTTTACTCTTGACGATTTGAGATCTCGTAGCCTTAAGGCTGCAGGTAAGACTCAAGGATGGGGAAAAAATTGGGGTACCCGTGACCGTGGTCTCGGTGGTCGCCGGACAATGATTAGTGCATCATCGACAACCCATTCTGAGAGGGATGCCCTCTTCAGAGAAACACTCACAACTACTGAAGGCCTGTGTGCGGTTAAGCTCATTTTAGCAGAGAACACTCACCCGTCACCCTCACCACTAGATCTCAACGTAACAATCCATATCTCCACTAGCCACAACTCACCATCTCCAATCTGTGCTCTAAATGGAACCCCTCTCCTCCATGCAAGGGAAAAGACTATCCTTCAATCAGGAAGCTCTCAGGAAATTAGCCTGCATCCCCTTCCTCTCTTGGCTTTGGAAGTTGTTAACTTGTCTGCTTCTGGAAGCCCTCAAGATGATCTTGTCCCCCCGGCAGATCAAGGCACCGGTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

404

Amino Acids

43.32

Weight (kDa)

6.38

Isoelectric Point (pI)

53.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 541
Acc36I ACCTGC 2 cut(s) 541, 770
Acc65I GGTACC 1 cut(s) 812
AccB1I GGYRCC 2 cut(s) 812, 1202
AciI CCGC 2 cut(s) 132, 929
AclWI GGATC 4 cut(s) 17, 29, 671, 714
AcsI RAATTY 2 cut(s) 91, 322
AcuI CTGAAG 2 cut(s) 877, 936
AfaI GTAC 1 cut(s) 814
AfiI CCNNNNNNNGG 7 cut(s) 138, 367, 368, 564, 734, 928, 1066
AflII CTTAAG 1 cut(s) 770
AgeI ACCGGT 1 cut(s) 1205
AgsI TTSAA 2 cut(s) 435, 1085
AhlI ACTAGT 2 cut(s) 295, 463
AleI CACNNNNGTG 1 cut(s) 230
AluBI AGCT 4 cut(s) 113, 655, 937, 1095
AluI AGCT 4 cut(s) 113, 655, 937, 1095
Alw21I GWGCWC 2 cut(s) 204, 1039
Alw26I GTCTC 1 cut(s) 833
Alw44I GTGCAC 1 cut(s) 200
AlwI GGATC 4 cut(s) 17, 29, 671, 714
Ama87I CYCGRG 1 cut(s) 376
AoxI GGCC 4 cut(s) 234, 310, 370, 919
ApaI GGGCCC 1 cut(s) 374
ApaLI GTGCAC 1 cut(s) 200
ApeKI GCWGC 1 cut(s) 776
ApoI RAATTY 2 cut(s) 91, 322
AsiGI ACCGGT 1 cut(s) 1205
Asp718I GGTACC 1 cut(s) 812
AspS9I GGNCC 4 cut(s) 212, 251, 370, 371
AsuC2I CCSGG 3 cut(s) 55, 210, 1190
AsuHPI GGTGA 7 cut(s) 121, 522, 704, 950, 957, 963, 1011
AsuII TTCGAA 1 cut(s) 635
AvaI CYCGRG 1 cut(s) 376
AvaII GGWCC 2 cut(s) 212, 251
BaeGI GKGCMC 2 cut(s) 204, 374
BanI GGYRCC 2 cut(s) 812, 1202
BanII GRGCYC 1 cut(s) 374
Bbv12I GWGCWC 2 cut(s) 204, 1039
BbvI GCAGC 1 cut(s) 763
BccI CCATC 7 cut(s) 85, 190, 271, 311, 452, 789, 1030
BclI TGATCA 1 cut(s) 583
BcnI CCSGG 3 cut(s) 55, 210, 1190
BcoDI GTCTC 1 cut(s) 833
BcuI ACTAGT 2 cut(s) 295, 463
BfaI CTAG 6 cut(s) 296, 464, 692, 977, 1008, 1213
BfmI CTRYAG 1 cut(s) 777
BfrI CTTAAG 1 cut(s) 770
BfuAI ACCTGC 2 cut(s) 541, 770
BglII AGATCT 4 cut(s) 341, 682, 758, 979
BisI GCNGC 1 cut(s) 777
BlsI GCNGC 1 cut(s) 778
Bme1390I CCNGG 3 cut(s) 55, 210, 1190
Bme18I GGWCC 2 cut(s) 212, 251
BmeT110I CYCGRG 1 cut(s) 376
BmgT120I GGNCC 4 cut(s) 212, 251, 370, 371
BmiI GGNNCC 5 cut(s) 372, 373, 814, 1048, 1204
BmrFI CCNGG 3 cut(s) 55, 210, 1190
BmsI GCATC 5 cut(s) 295, 581, 866, 874, 1123
BoxI GACNNNNGTC 1 cut(s) 825
BplI GAGNNNNNCTC 2 cut(s) 888, 920
BpmI CTGGAG 1 cut(s) 213
Bpu14I TTCGAA 1 cut(s) 635
BpuEI CTTGAG 2 cut(s) 774, 1155
BpuMI CCSGG 3 cut(s) 55, 210, 1190
BsaBI GATNNNNATC 2 cut(s) 664, 681
BsaI GGTCTC 1 cut(s) 833
BsaJI CCNNGG 5 cut(s) 247, 366, 375, 823, 1188
BsaWI WCCGGW 2 cut(s) 138, 1205
BsaXI ACNNNNNCTCC 2 cut(s) 90, 120
Bsc4I CCNNNNNNNGG 7 cut(s) 138, 367, 368, 564, 734, 928, 1066
Bse118I RCCGGY 1 cut(s) 1205
Bse1I ACTGG 1 cut(s) 230
Bse3DI GCAATG 1 cut(s) 558
Bse8I GATNNNNATC 2 cut(s) 664, 681
BseDI CCNNGG 5 cut(s) 247, 366, 375, 823, 1188
BseGI GGATG 6 cut(s) 77, 310, 615, 800, 889, 1114
BseJI GATNNNNATC 2 cut(s) 664, 681
BseLI CCNNNNNNNGG 7 cut(s) 138, 367, 368, 564, 734, 928, 1066
BseMI GCAATG 1 cut(s) 558
BseMII CTCAG 2 cut(s) 867, 1112
BseNI ACTGG 1 cut(s) 230
BseRI GAGGAG 1 cut(s) 1046
BseSI GKGCMC 2 cut(s) 204, 374
BseXI GCAGC 1 cut(s) 763
BseYI CCCAGC 1 cut(s) 563
BsgI GTGCAG 1 cut(s) 519
BshFI GGCC 4 cut(s) 236, 312, 372, 921
BshNI GGYRCC 2 cut(s) 812, 1202
BshTI ACCGGT 1 cut(s) 1205
BsiHKAI GWGCWC 2 cut(s) 204, 1039
BsiHKCI CYCGRG 1 cut(s) 376
BsiSI CCGG 6 cut(s) 55, 139, 210, 841, 1190, 1206
BslFI GGGAC 3 cut(s) 142, 408, 1169
BslI CCNNNNNNNGG 7 cut(s) 138, 367, 368, 564, 734, 928, 1066
BsmAI GTCTC 1 cut(s) 833
BsmFI GGGAC 3 cut(s) 142, 408, 1169
BsnI GGCC 4 cut(s) 236, 312, 372, 921
Bso31I GGTCTC 1 cut(s) 833
BsoBI CYCGRG 1 cut(s) 376
Bsp119I TTCGAA 1 cut(s) 635
Bsp120I GGGCCC 1 cut(s) 370
Bsp1286I GDGCHC 3 cut(s) 204, 374, 1039
Bsp19I CCATGG 1 cut(s) 247
BspACI CCGC 2 cut(s) 132, 929
BspANI GGCC 4 cut(s) 236, 312, 372, 921
BspCNI CTCAG 2 cut(s) 868, 1111
BspLI GGNNCC 5 cut(s) 372, 373, 814, 1048, 1204
BspMAI CTGCAG 1 cut(s) 781
BspMI ACCTGC 2 cut(s) 541, 770
BspPI GGATC 4 cut(s) 17, 29, 671, 714
BspT104I TTCGAA 1 cut(s) 635
BspT107I GGYRCC 2 cut(s) 812, 1202
BspTI CTTAAG 1 cut(s) 770
BspTNI GGTCTC 1 cut(s) 833
BsrDI GCAATG 1 cut(s) 558
BsrFI RCCGGY 1 cut(s) 1205
BsrI ACTGG 1 cut(s) 230
BssAI RCCGGY 1 cut(s) 1205
BssECI CCNNGG 5 cut(s) 247, 366, 375, 823, 1188
BssT1I CCWWGG 2 cut(s) 247, 366
Bst4CI ACNGT 3 cut(s) 38, 65, 824
Bst6I CTCTTC 3 cut(s) 244, 632, 896
BstAFI CTTAAG 1 cut(s) 770
BstBI TTCGAA 1 cut(s) 635
BstC8I GCNNGC 3 cut(s) 51, 310, 1112
BstDEI CTNAG 3 cut(s) 656, 876, 1098
BstDSI CCRYGG 2 cut(s) 247, 823
BstF5I GGATG 6 cut(s) 77, 310, 615, 800, 889, 1114
BstMAI GTCTC 1 cut(s) 833
BstMWI GCNNNNNNNGC 2 cut(s) 55, 569
BstPAI GACNNNNGTC 1 cut(s) 825
BstSCI CCNGG 3 cut(s) 53, 208, 1188
BstSFI CTRYAG 1 cut(s) 777
BstSLI GKGCMC 2 cut(s) 204, 374
BstV1I GCAGC 1 cut(s) 763
BstX2I RGATCY 5 cut(s) 341, 682, 706, 758, 979
BstYI RGATCY 5 cut(s) 341, 682, 706, 758, 979
BsuRI GGCC 4 cut(s) 236, 312, 372, 921
BtgI CCRYGG 2 cut(s) 247, 823
BtgZI GCGATG 1 cut(s) 168
BtsCI GGATG 6 cut(s) 77, 310, 615, 800, 889, 1114
BtsIMutI CAGTG 2 cut(s) 43, 237
BveI ACCTGC 2 cut(s) 541, 770
Cac8I GCNNGC 3 cut(s) 51, 310, 1112
Cfr10I RCCGGY 1 cut(s) 1205
Cfr13I GGNCC 4 cut(s) 212, 251, 370, 371
Csp6I GTAC 1 cut(s) 813
CspAI ACCGGT 1 cut(s) 1205
CviAII CATG 3 cut(s) 31, 248, 1061
CviQI GTAC 1 cut(s) 813
DdeI CTNAG 3 cut(s) 656, 876, 1098
Eam1104I CTCTTC 3 cut(s) 244, 632, 896
EarI CTCTTC 3 cut(s) 244, 632, 896
Eco130I CCWWGG 2 cut(s) 247, 366
Eco147I AGGCCT 1 cut(s) 921
Eco24I GRGCYC 1 cut(s) 374
Eco31I GGTCTC 1 cut(s) 833
Eco32I GATATC 1 cut(s) 385
Eco47I GGWCC 2 cut(s) 212, 251
Eco57I CTGAAG 2 cut(s) 877, 936
Eco88I CYCGRG 1 cut(s) 376
EcoO109I RGGNCCY 1 cut(s) 371
EcoRI GAATTC 1 cut(s) 91
EcoRV GATATC 1 cut(s) 385
EcoT14I CCWWGG 2 cut(s) 247, 366
EcoT38I GRGCYC 1 cut(s) 374
ErhI CCWWGG 2 cut(s) 247, 366
FaeI CATG 3 cut(s) 34, 251, 1064
FaiI YATR 8 cut(s) 32, 249, 275, 337, 392, 527, 999, 1062
FalI AAGNNNNNCTT 2 cut(s) 1164, 1196
FaqI GGGAC 3 cut(s) 142, 408, 1169
FatI CATG 3 cut(s) 30, 247, 1060
FbaI TGATCA 1 cut(s) 583
Fnu4HI GCNGC 1 cut(s) 777
FokI GGATG 6 cut(s) 64, 317, 602, 807, 896, 1101
FriOI GRGCYC 1 cut(s) 374
Fsp4HI GCNGC 1 cut(s) 777
FspBI CTAG 6 cut(s) 296, 464, 692, 977, 1008, 1213
GluI GCNGC 1 cut(s) 777
GsaI CCCAGC 1 cut(s) 567
GsuI CTGGAG 1 cut(s) 213
HaeIII GGCC 4 cut(s) 236, 312, 372, 921
HapII CCGG 6 cut(s) 55, 139, 210, 841, 1190, 1206
Hin1II CATG 3 cut(s) 34, 251, 1064
HincII GTYRAC 2 cut(s) 68, 1147
HindII GTYRAC 2 cut(s) 68, 1147
HindIII AAGCTT 1 cut(s) 653
HinfI GANTC 4 cut(s) 118, 142, 632, 787
HpaI GTTAAC 1 cut(s) 1147
HpaII CCGG 6 cut(s) 55, 139, 210, 841, 1190, 1206
HphI GGTGA 7 cut(s) 121, 522, 704, 950, 957, 963, 1011
Hpy166II GTNNAC 4 cut(s) 68, 202, 741, 1147
Hpy188I TCNGA 6 cut(s) 21, 117, 593, 631, 877, 896
Hpy188III TCNNGA 8 cut(s) 257, 378, 680, 746, 1089, 1100, 1161, 1172
Hpy8I GTNNAC 4 cut(s) 68, 202, 741, 1147
HpyAV CCTTC 4 cut(s) 738, 911, 1091, 1130
HpyCH4III ACNGT 3 cut(s) 38, 65, 824
HpyCH4IV ACGT 1 cut(s) 987
HpyCH4V TGCA 9 cut(s) 202, 308, 461, 536, 572, 779, 857, 1064, 1114
HpyF10VI GCNNNNNNNGC 2 cut(s) 55, 569
HpyF3I CTNAG 3 cut(s) 656, 876, 1098
HpySE526I ACGT 1 cut(s) 987
Hsp92II CATG 3 cut(s) 34, 251, 1064
KpnI GGTACC 1 cut(s) 816
Ksp22I TGATCA 1 cut(s) 583
KspAI GTTAAC 1 cut(s) 1147
LmnI GCTCC 2 cut(s) 111, 118
Lsp1109I GCAGC 1 cut(s) 763
LweI GCATC 5 cut(s) 295, 581, 866, 874, 1123
MaeI CTAG 6 cut(s) 296, 464, 692, 977, 1008, 1213
MaeII ACGT 1 cut(s) 987
MaeIII GTNAC 4 cut(s) 818, 963, 988, 1208
MboII GAAGA 6 cut(s) 231, 234, 649, 701, 723, 883
MflI RGATCY 5 cut(s) 341, 682, 706, 758, 979
MhlI GDGCHC 3 cut(s) 204, 374, 1039
MluCI AATT 6 cut(s) 71, 91, 322, 404, 805, 1104
MlyI GAGTC 2 cut(s) 136, 781
MmeI TCCRAC 1 cut(s) 616
MseI TTAA 5 cut(s) 426, 456, 771, 933, 1146
MslI CAYNNNNRTG 2 cut(s) 29, 230
MspCI CTTAAG 1 cut(s) 770
MspI CCGG 6 cut(s) 55, 139, 210, 841, 1190, 1206
MspR9I CCNGG 3 cut(s) 55, 210, 1190
MwoI GCNNNNNNNGC 2 cut(s) 55, 569
NciI CCSGG 3 cut(s) 55, 210, 1190
NcoI CCATGG 1 cut(s) 247
NlaIII CATG 3 cut(s) 34, 251, 1064
NlaIV GGNNCC 5 cut(s) 372, 373, 814, 1048, 1204
NmuCI GTSAC 3 cut(s) 818, 963, 1208
NspV TTCGAA 1 cut(s) 635
OliI CACNNNNGTG 1 cut(s) 230
PaqCI CACCTGC 1 cut(s) 541
PceI AGGCCT 1 cut(s) 921
PfeI GAWTC 2 cut(s) 118, 632
PinAI ACCGGT 1 cut(s) 1205
PkrI GCNGC 1 cut(s) 778
PleI GAGTC 2 cut(s) 136, 781
PpsI GAGTC 2 cut(s) 136, 781
PshAI GACNNNNGTC 1 cut(s) 825
PspFI CCCAGC 1 cut(s) 563
PspN4I GGNNCC 5 cut(s) 372, 373, 814, 1048, 1204
PspOMI GGGCCC 1 cut(s) 370
PspPI GGNCC 4 cut(s) 212, 251, 370, 371
PstI CTGCAG 1 cut(s) 781
PsuI RGATCY 5 cut(s) 341, 682, 706, 758, 979
RsaI GTAC 1 cut(s) 814
RsaNI GTAC 1 cut(s) 813
RseI CAYNNNNRTG 2 cut(s) 29, 230
SaqAI TTAA 5 cut(s) 426, 456, 771, 933, 1146
SatI GCNGC 1 cut(s) 777
Sau96I GGNCC 4 cut(s) 212, 251, 370, 371
SchI GAGTC 2 cut(s) 136, 781
ScrFI CCNGG 3 cut(s) 55, 210, 1190
SduI GDGCHC 3 cut(s) 204, 374, 1039
SfaNI GCATC 5 cut(s) 295, 581, 866, 874, 1123
SfcI CTRYAG 1 cut(s) 777
SfuI TTCGAA 1 cut(s) 635
SgrAI CRCCGGYG 1 cut(s) 1205
SinI GGWCC 2 cut(s) 212, 251
SmiMI CAYNNNNRTG 2 cut(s) 29, 230
SmlI CTYRAG 3 cut(s) 770, 789, 1170
SmoI CTYRAG 3 cut(s) 770, 789, 1170
SpeI ACTAGT 2 cut(s) 295, 463
Sse9I AATT 6 cut(s) 71, 91, 322, 404, 805, 1104
SseBI AGGCCT 1 cut(s) 921
SsiI CCGC 2 cut(s) 132, 929
SspMI CTAG 6 cut(s) 296, 464, 692, 977, 1008, 1213
StuI AGGCCT 1 cut(s) 921
StyD4I CCNGG 3 cut(s) 53, 208, 1188
StyI CCWWGG 2 cut(s) 247, 366
TaaI ACNGT 3 cut(s) 38, 65, 824
TaiI ACGT 1 cut(s) 990
TaqI TCGA 4 cut(s) 12, 89, 635, 863
TasI AATT 6 cut(s) 71, 91, 322, 404, 805, 1104
TfiI GAWTC 2 cut(s) 118, 632
Tru1I TTAA 5 cut(s) 426, 456, 771, 933, 1146
Tru9I TTAA 5 cut(s) 426, 456, 771, 933, 1146
TscAI CASTG 2 cut(s) 43, 237
TseFI GTSAC 3 cut(s) 818, 963, 1208
TseI GCWGC 1 cut(s) 776
Tsp45I GTSAC 3 cut(s) 818, 963, 1208
TspDTI ATGAA 2 cut(s) 19, 306
TspRI CASTG 2 cut(s) 43, 237
Vha464I CTTAAG 1 cut(s) 770
VneI GTGCAC 1 cut(s) 200
VpaK11BI GGWCC 2 cut(s) 212, 251
XapI RAATTY 2 cut(s) 91, 322
XspI CTAG 6 cut(s) 296, 464, 692, 977, 1008, 1213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.