Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 568 |
| Acc36I | ACCTGC | 1 cut(s) | 568 |
| AciI | CCGC | 1 cut(s) | 140 |
| AcsI | RAATTY | 1 cut(s) | 129 |
| AfaI | GTAC | 3 cut(s) | 204, 646, 667 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 158, 381, 433 |
| AgsI | TTSAA | 3 cut(s) | 59, 379, 394 |
| AhlI | ACTAGT | 1 cut(s) | 541 |
| AjnI | CCWGG | 2 cut(s) | 96, 697 |
| AleI | CACNNNNGTG | 1 cut(s) | 278 |
| AluBI | AGCT | 2 cut(s) | 62, 722 |
| AluI | AGCT | 2 cut(s) | 62, 722 |
| Alw26I | GTCTC | 2 cut(s) | 125, 532 |
| AoxI | GGCC | 3 cut(s) | 489, 634, 700 |
| ApoI | RAATTY | 1 cut(s) | 129 |
| AspS9I | GGNCC | 3 cut(s) | 100, 490, 634 |
| AsuHPI | GGTGA | 2 cut(s) | 236, 292 |
| AsuII | TTCGAA | 1 cut(s) | 78 |
| AsuNHI | GCTAGC | 1 cut(s) | 242 |
| AvaII | GGWCC | 1 cut(s) | 100 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 281, 314 |
| BauI | CACGAG | 1 cut(s) | 369 |
| BccI | CCATC | 3 cut(s) | 175, 215, 528 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 68, 102 |
| BciT130I | CCWGG | 2 cut(s) | 98, 699 |
| BcoDI | GTCTC | 2 cut(s) | 125, 532 |
| BcuI | ACTAGT | 1 cut(s) | 541 |
| BfaI | CTAG | 6 cut(s) | 104, 153, 243, 416, 542, 723 |
| BfuAI | ACCTGC | 1 cut(s) | 568 |
| Bme1390I | CCNGG | 2 cut(s) | 98, 699 |
| Bme18I | GGWCC | 1 cut(s) | 100 |
| BmgT120I | GGNCC | 3 cut(s) | 100, 490, 634 |
| BmiI | GGNNCC | 1 cut(s) | 150 |
| BmrFI | CCNGG | 2 cut(s) | 98, 699 |
| BmsI | GCATC | 2 cut(s) | 751, 795 |
| BmtI | GCTAGC | 1 cut(s) | 246 |
| Bpu14I | TTCGAA | 1 cut(s) | 78 |
| BsaJI | CCNNGG | 4 cut(s) | 216, 293, 431, 671 |
| BsaWI | WCCGGW | 1 cut(s) | 351 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 158, 381, 433 |
| Bse1I | ACTGG | 1 cut(s) | 482 |
| BseBI | CCWGG | 2 cut(s) | 98, 699 |
| BseDI | CCNNGG | 4 cut(s) | 216, 293, 431, 671 |
| BseGI | GGATG | 4 cut(s) | 49, 148, 192, 226 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 158, 381, 433 |
| BseNI | ACTGG | 1 cut(s) | 482 |
| BseRI | GAGGAG | 2 cut(s) | 467, 520 |
| BshFI | GGCC | 3 cut(s) | 491, 636, 702 |
| BsiSI | CCGG | 1 cut(s) | 352 |
| BslFI | GGGAC | 1 cut(s) | 324 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 158, 381, 433 |
| BsmAI | GTCTC | 2 cut(s) | 125, 532 |
| BsmFI | GGGAC | 1 cut(s) | 324 |
| BsnI | GGCC | 3 cut(s) | 491, 636, 702 |
| Bsp119I | TTCGAA | 1 cut(s) | 78 |
| Bsp19I | CCATGG | 1 cut(s) | 216 |
| BspACI | CCGC | 1 cut(s) | 140 |
| BspANI | GGCC | 3 cut(s) | 491, 636, 702 |
| BspHI | TCATGA | 2 cut(s) | 25, 397 |
| BspLI | GGNNCC | 1 cut(s) | 150 |
| BspMI | ACCTGC | 1 cut(s) | 568 |
| BspOI | GCTAGC | 1 cut(s) | 246 |
| BspT104I | TTCGAA | 1 cut(s) | 78 |
| BsrI | ACTGG | 1 cut(s) | 482 |
| BssECI | CCNNGG | 4 cut(s) | 216, 293, 431, 671 |
| BssSI | CACGAG | 1 cut(s) | 369 |
| BssT1I | CCWWGG | 4 cut(s) | 216, 293, 431, 671 |
| Bst2BI | CACGAG | 1 cut(s) | 369 |
| Bst2UI | CCWGG | 2 cut(s) | 98, 699 |
| Bst4CI | ACNGT | 2 cut(s) | 277, 466 |
| Bst6I | CTCTTC | 1 cut(s) | 721 |
| BstBI | TTCGAA | 1 cut(s) | 78 |
| BstC8I | GCNNGC | 1 cut(s) | 244 |
| BstDSI | CCRYGG | 1 cut(s) | 216 |
| BstF5I | GGATG | 4 cut(s) | 49, 148, 192, 226 |
| BstMAI | GTCTC | 2 cut(s) | 125, 532 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 341 |
| BstNI | CCWGG | 2 cut(s) | 98, 699 |
| BstNSI | RCATGY | 1 cut(s) | 209 |
| BstSCI | CCNGG | 2 cut(s) | 96, 697 |
| BsuRI | GGCC | 3 cut(s) | 491, 636, 702 |
| BtgI | CCRYGG | 1 cut(s) | 216 |
| BtsCI | GGATG | 4 cut(s) | 49, 148, 192, 226 |
| BtsIMutI | CAGTG | 1 cut(s) | 273 |
| BveI | ACCTGC | 1 cut(s) | 568 |
| Cac8I | GCNNGC | 1 cut(s) | 244 |
| CciI | TCATGA | 2 cut(s) | 25, 397 |
| Cfr13I | GGNCC | 3 cut(s) | 100, 490, 634 |
| Csp6I | GTAC | 3 cut(s) | 203, 645, 666 |
| CviAII | CATG | 8 cut(s) | 26, 124, 206, 217, 338, 398, 524, 631 |
| CviQI | GTAC | 3 cut(s) | 203, 645, 666 |
| Eam1104I | CTCTTC | 1 cut(s) | 721 |
| EarI | CTCTTC | 1 cut(s) | 721 |
| Eco130I | CCWWGG | 4 cut(s) | 216, 293, 431, 671 |
| Eco147I | AGGCCT | 1 cut(s) | 702 |
| Eco47I | GGWCC | 1 cut(s) | 100 |
| EcoRI | GAATTC | 1 cut(s) | 129 |
| EcoRII | CCWGG | 2 cut(s) | 96, 697 |
| EcoT14I | CCWWGG | 4 cut(s) | 216, 293, 431, 671 |
| ErhI | CCWWGG | 4 cut(s) | 216, 293, 431, 671 |
| FaeI | CATG | 8 cut(s) | 29, 127, 209, 220, 341, 401, 527, 634 |
| FaqI | GGGAC | 1 cut(s) | 324 |
| FatI | CATG | 8 cut(s) | 25, 123, 205, 216, 337, 397, 523, 630 |
| FokI | GGATG | 4 cut(s) | 56, 155, 199, 233 |
| FspBI | CTAG | 6 cut(s) | 104, 153, 243, 416, 542, 723 |
| HaeIII | GGCC | 3 cut(s) | 491, 636, 702 |
| HapII | CCGG | 1 cut(s) | 352 |
| Hin1II | CATG | 8 cut(s) | 29, 127, 209, 220, 341, 401, 527, 634 |
| HincII | GTYRAC | 1 cut(s) | 469 |
| HindII | GTYRAC | 1 cut(s) | 469 |
| HinfI | GANTC | 5 cut(s) | 165, 394, 401, 572, 708 |
| HpaII | CCGG | 1 cut(s) | 352 |
| HphI | GGTGA | 2 cut(s) | 236, 292 |
| Hpy166II | GTNNAC | 1 cut(s) | 469 |
| Hpy188I | TCNGA | 2 cut(s) | 303, 795 |
| Hpy188III | TCNNGA | 3 cut(s) | 26, 369, 398 |
| Hpy8I | GTNNAC | 1 cut(s) | 469 |
| HpyAV | CCTTC | 3 cut(s) | 385, 713, 802 |
| HpyCH4III | ACNGT | 2 cut(s) | 277, 466 |
| HpyCH4V | TGCA | 2 cut(s) | 691, 764 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 341 |
| Hsp92II | CATG | 8 cut(s) | 29, 127, 209, 220, 341, 401, 527, 634 |
| LmnI | GCTCC | 1 cut(s) | 719 |
| LweI | GCATC | 2 cut(s) | 751, 795 |
| MaeI | CTAG | 6 cut(s) | 104, 153, 243, 416, 542, 723 |
| MaeIII | GTNAC | 1 cut(s) | 224 |
| MboII | GAAGA | 3 cut(s) | 92, 738, 770 |
| MluCI | AATT | 4 cut(s) | 129, 548, 588, 639 |
| MlyI | GAGTC | 2 cut(s) | 174, 702 |
| MseI | TTAA | 2 cut(s) | 441, 461 |
| MslI | CAYNNNNRTG | 1 cut(s) | 278 |
| MspI | CCGG | 1 cut(s) | 352 |
| MspR9I | CCNGG | 2 cut(s) | 98, 699 |
| MvaI | CCWGG | 2 cut(s) | 98, 699 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 341 |
| NcoI | CCATGG | 1 cut(s) | 216 |
| NheI | GCTAGC | 1 cut(s) | 242 |
| NlaIII | CATG | 8 cut(s) | 29, 127, 209, 220, 341, 401, 527, 634 |
| NlaIV | GGNNCC | 1 cut(s) | 150 |
| NmuCI | GTSAC | 1 cut(s) | 224 |
| NspI | RCATGY | 1 cut(s) | 209 |
| NspV | TTCGAA | 1 cut(s) | 78 |
| OliI | CACNNNNGTG | 1 cut(s) | 278 |
| PagI | TCATGA | 2 cut(s) | 25, 397 |
| PaqCI | CACCTGC | 1 cut(s) | 568 |
| PceI | AGGCCT | 1 cut(s) | 702 |
| PfeI | GAWTC | 3 cut(s) | 394, 401, 572 |
| PfoI | TCCNGGA | 1 cut(s) | 96 |
| PleI | GAGTC | 2 cut(s) | 173, 702 |
| PpsI | GAGTC | 2 cut(s) | 173, 702 |
| Psp6I | CCWGG | 2 cut(s) | 96, 697 |
| PspGI | CCWGG | 2 cut(s) | 96, 697 |
| PspN4I | GGNNCC | 1 cut(s) | 150 |
| PspPI | GGNCC | 3 cut(s) | 100, 490, 634 |
| RsaI | GTAC | 3 cut(s) | 204, 646, 667 |
| RsaNI | GTAC | 3 cut(s) | 203, 645, 666 |
| RseI | CAYNNNNRTG | 1 cut(s) | 278 |
| SaqAI | TTAA | 2 cut(s) | 441, 461 |
| Sau96I | GGNCC | 3 cut(s) | 100, 490, 634 |
| SchI | GAGTC | 2 cut(s) | 174, 702 |
| ScrFI | CCNGG | 2 cut(s) | 98, 699 |
| SfaNI | GCATC | 2 cut(s) | 751, 795 |
| SfuI | TTCGAA | 1 cut(s) | 78 |
| SinI | GGWCC | 1 cut(s) | 100 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 278 |
| SpeI | ACTAGT | 1 cut(s) | 541 |
| Sse9I | AATT | 4 cut(s) | 129, 548, 588, 639 |
| SseBI | AGGCCT | 1 cut(s) | 702 |
| SsiI | CCGC | 1 cut(s) | 140 |
| SspMI | CTAG | 6 cut(s) | 104, 153, 243, 416, 542, 723 |
| StuI | AGGCCT | 1 cut(s) | 702 |
| StyD4I | CCNGG | 2 cut(s) | 96, 697 |
| StyI | CCWWGG | 4 cut(s) | 216, 293, 431, 671 |
| TaaI | ACNGT | 2 cut(s) | 277, 466 |
| TaqI | TCGA | 2 cut(s) | 78, 706 |
| TasI | AATT | 4 cut(s) | 129, 548, 588, 639 |
| TfiI | GAWTC | 3 cut(s) | 394, 401, 572 |
| Tru1I | TTAA | 2 cut(s) | 441, 461 |
| Tru9I | TTAA | 2 cut(s) | 441, 461 |
| TscAI | CASTG | 1 cut(s) | 280 |
| TseFI | GTSAC | 1 cut(s) | 224 |
| Tsp45I | GTSAC | 1 cut(s) | 224 |
| TspDTI | ATGAA | 1 cut(s) | 414 |
| TspRI | CASTG | 1 cut(s) | 280 |
| VpaK11BI | GGWCC | 1 cut(s) | 100 |
| XapI | RAATTY | 1 cut(s) | 129 |
| XceI | RCATGY | 1 cut(s) | 209 |
| XspI | CTAG | 6 cut(s) | 104, 153, 243, 416, 542, 723 |