Rmu_sc0019862.1_g000002

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0019862.1
OG0000073
Physical Location & Seq
Reverse (-)
945 .. 2117
1173 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0019862.1_g000002.1.cds

Sequence Viewer

Length: 1173 bp
atgactatggatgaccccctcaatggtggtgatggaacctacagtttccttagagtccgtgtactgttcgatggaagcaaacccctgctggctggtttcaggcttgctagagatgatggctctgtttcgtgggttgaagtcaagtatgaaaagcttgcaaagttttgttatcactgtggcagattaaggcataaccacaacatcagagccccttgtatgaggctagttgattcccgaaatgaaaatgtggaacttggtagctggatgtcaactttagcttttcgtcgaccagttagacaactaattcaacctccacatgcggtggtgcaggaagcccaagcccaatcagcagcggacaccattccggcaacgccaatctctagacggagaagggcaggtcaactttttgaaccttttggtgtggggacagtcggccaaaattccagttctcaaggtgctctctctgcaagggcagaaagcagcccctctaaccaggttcaaagctggacaagaccatacgagggctctgggaatcttttacagccccccacaaataaccactctctctctggtcaggtttctcatcatgatatgcaactagcatataggacaaatcttgcttcattcccaaatagcttcatgggtcaaggtagtaaccaatcttgcttcccaaatatcctgaccccttctcaaccaaactggtcccacctccatcaatccaactattctcacctcaacttccaatcagataccactgtatttgatagaagtctattaatccctgtccacccccagttgactaacacatccatctcatatcctgcgcctcttccttttccctattgccacctcactaggaacacaaccctcacccatctagacaccccccacaccatatctatccctccagttgatattaatattccaatgcccatcattaggaacccatgttccttgagtccaaaaatcagctccaagaaaagagtgggctcctataggccccctagatcaaagagagccaagaaaggagctgcaaagttatttgcatctcgaatgcaagtcgaagagtccaatgaacagggtgatcttgttatttatggagctgatcatgatgagggttcctcccctcaaggcggtggctgctggccttcgacagccgcggggaacccatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4 zf-RING_2

Protein Analysis

390

Amino Acids

42.99

Weight (kDa)

9.37

Isoelectric Point (pI)

54.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 386
AccI GTMKAC 1 cut(s) 286
AccII CGCG 1 cut(s) 1160
AciI CCGC 5 cut(s) 320, 353, 1134, 1158, 1160
AcoI YGGCCR 1 cut(s) 433
AcsI RAATTY 1 cut(s) 439
AfaI GTAC 1 cut(s) 63
AfiI CCNNNNNNNGG 4 cut(s) 23, 521, 939, 1133
AgsI TTSAA 4 cut(s) 137, 308, 410, 500
AjnI CCWGG 1 cut(s) 492
AloI GAACNNNNNNTCC 4 cut(s) 934, 935, 966, 967
AluBI AGCT 8 cut(s) 154, 261, 278, 504, 636, 972, 1031, 1103
AluI AGCT 8 cut(s) 154, 261, 278, 504, 636, 972, 1031, 1103
Alw21I GWGCWC 1 cut(s) 460
AoxI GGCC 3 cut(s) 433, 998, 1145
ApeKI GCWGC 4 cut(s) 350, 480, 1031, 1140
ApoI RAATTY 1 cut(s) 439
AseI ATTAAT 2 cut(s) 776, 918
AspLEI GCGC 1 cut(s) 826
AspS9I GGNCC 2 cut(s) 702, 999
AsuHPI GGTGA 4 cut(s) 41, 722, 862, 1094
AvaII GGWCC 1 cut(s) 702
BaeI ACNNNNGTAYC 2 cut(s) 741, 774
BanII GRGCYC 3 cut(s) 211, 527, 992
Bbv12I GWGCWC 1 cut(s) 460
BbvI GCAGC 4 cut(s) 362, 492, 1018, 1127
BccI CCATC 7 cut(s) 26, 65, 110, 720, 818, 882, 941
BciT130I CCWGG 1 cut(s) 494
BclI TGATCA 1 cut(s) 1105
BfaI CTAG 7 cut(s) 108, 224, 381, 599, 855, 878, 1005
BfmI CTRYAG 2 cut(s) 40, 994
BfuAI ACCTGC 1 cut(s) 386
BisI GCNGC 5 cut(s) 351, 481, 1032, 1141, 1158
BlsI GCNGC 5 cut(s) 352, 482, 1033, 1142, 1159
Bme1390I CCNGG 1 cut(s) 494
Bme18I GGWCC 1 cut(s) 702
BmgT120I GGNCC 2 cut(s) 702, 999
BmiI GGNNCC 7 cut(s) 37, 704, 944, 991, 1001, 1120, 1166
BmrFI CCNGG 1 cut(s) 494
BmrI ACTGGG 1 cut(s) 787
BmsI GCATC 1 cut(s) 1055
BmuI ACTGGG 1 cut(s) 787
BplI GAGNNNNNCTC 2 cut(s) 1106, 1138
BpmI CTGGAG 1 cut(s) 891
BpuEI CTTGAG 3 cut(s) 435, 976, 1113
BsaJI CCNNGG 1 cut(s) 1158
Bsc4I CCNNNNNNNGG 4 cut(s) 23, 521, 939, 1133
Bse1I ACTGG 5 cut(s) 290, 444, 704, 793, 908
BseBI CCWGG 1 cut(s) 494
BseDI CCNNGG 1 cut(s) 1158
BseGI GGATG 3 cut(s) 16, 270, 806
BseLI CCNNNNNNNGG 4 cut(s) 23, 521, 939, 1133
BseNI ACTGG 5 cut(s) 290, 444, 704, 793, 908
BseXI GCAGC 4 cut(s) 362, 492, 1018, 1127
BsgI GTGCAG 1 cut(s) 347
Bsh1236I CGCG 1 cut(s) 1160
BshFI GGCC 3 cut(s) 435, 1000, 1147
BsiHKAI GWGCWC 1 cut(s) 460
BsiSI CCGG 1 cut(s) 365
BslFI GGGAC 2 cut(s) 439, 688
BslI CCNNNNNNNGG 4 cut(s) 23, 521, 939, 1133
BsmFI GGGAC 2 cut(s) 439, 688
BsmI GAATGC 1 cut(s) 1059
BsnI GGCC 3 cut(s) 435, 1000, 1147
Bsp1286I GDGCHC 4 cut(s) 211, 460, 527, 992
Bsp143I GATC 3 cut(s) 1007, 1084, 1105
BspACI CCGC 5 cut(s) 320, 353, 1134, 1158, 1160
BspANI GGCC 3 cut(s) 435, 1000, 1147
BspFNI CGCG 1 cut(s) 1160
BspHI TCATGA 2 cut(s) 586, 1108
BspLI GGNNCC 7 cut(s) 37, 704, 944, 991, 1001, 1120, 1166
BspMI ACCTGC 1 cut(s) 386
BsrI ACTGG 5 cut(s) 290, 444, 704, 793, 908
BssECI CCNNGG 1 cut(s) 1158
BssMI GATC 3 cut(s) 1007, 1084, 1105
Bst2UI CCWGG 1 cut(s) 494
Bst4CI ACNGT 5 cut(s) 44, 66, 176, 430, 757
Bst6I CTCTTC 2 cut(s) 834, 1059
BstC8I GCNNGC 4 cut(s) 90, 105, 156, 1145
BstDEI CTNAG 1 cut(s) 50
BstDSI CCRYGG 1 cut(s) 1158
BstF5I GGATG 3 cut(s) 16, 270, 806
BstFNI CGCG 1 cut(s) 1160
BstHHI GCGC 1 cut(s) 826
BstKTI GATC 3 cut(s) 1010, 1087, 1108
BstMBI GATC 3 cut(s) 1007, 1084, 1105
BstMWI GCNNNNNNNGC 3 cut(s) 347, 464, 1140
BstNI CCWGG 1 cut(s) 494
BstNSI RCATGY 1 cut(s) 320
BstSCI CCNGG 1 cut(s) 492
BstSFI CTRYAG 2 cut(s) 40, 994
BstUI CGCG 1 cut(s) 1160
BstV1I GCAGC 4 cut(s) 362, 492, 1018, 1127
BsuRI GGCC 3 cut(s) 435, 1000, 1147
BtgI CCRYGG 1 cut(s) 1158
BtsCI GGATG 3 cut(s) 16, 270, 806
BtsIMutI CAGTG 2 cut(s) 172, 753
BveI ACCTGC 1 cut(s) 386
Cac8I GCNNGC 4 cut(s) 90, 105, 156, 1145
CciI TCATGA 2 cut(s) 586, 1108
CfoI GCGC 1 cut(s) 826
Cfr13I GGNCC 2 cut(s) 702, 999
Cfr42I CCGCGG 1 cut(s) 1161
CsiI ACCWGGT 1 cut(s) 492
Csp6I GTAC 1 cut(s) 62
CspCI CAANNNNNGTGG 2 cut(s) 742, 777
CviAII CATG 6 cut(s) 317, 587, 640, 948, 1109, 1170
CviQI GTAC 1 cut(s) 62
DdeI CTNAG 1 cut(s) 50
DpnI GATC 3 cut(s) 1009, 1086, 1107
DpnII GATC 3 cut(s) 1007, 1084, 1105
EaeI YGGCCR 1 cut(s) 433
Eam1104I CTCTTC 2 cut(s) 834, 1059
EarI CTCTTC 2 cut(s) 834, 1059
Eco24I GRGCYC 3 cut(s) 211, 527, 992
Eco47I GGWCC 1 cut(s) 702
EcoO109I RGGNCCY 1 cut(s) 999
EcoRII CCWGG 1 cut(s) 492
EcoT38I GRGCYC 3 cut(s) 211, 527, 992
FaeI CATG 6 cut(s) 320, 590, 643, 951, 1112, 1173
FaqI GGGAC 2 cut(s) 439, 688
FatI CATG 6 cut(s) 316, 586, 639, 947, 1108, 1169
FauI CCCGC 1 cut(s) 1153
FbaI TGATCA 1 cut(s) 1105
FblI GTMKAC 1 cut(s) 286
Fnu4HI GCNGC 5 cut(s) 351, 481, 1032, 1141, 1158
FokI GGATG 3 cut(s) 23, 277, 793
FriOI GRGCYC 3 cut(s) 211, 527, 992
Fsp4HI GCNGC 5 cut(s) 351, 481, 1032, 1141, 1158
FspBI CTAG 7 cut(s) 108, 224, 381, 599, 855, 878, 1005
GlaI GCGC 1 cut(s) 825
GluI GCNGC 5 cut(s) 351, 481, 1032, 1141, 1158
GsuI CTGGAG 1 cut(s) 891
HaeIII GGCC 3 cut(s) 435, 1000, 1147
HapII CCGG 1 cut(s) 365
HhaI GCGC 1 cut(s) 826
Hin1II CATG 6 cut(s) 320, 590, 643, 951, 1112, 1173
Hin6I GCGC 1 cut(s) 824
HinP1I GCGC 1 cut(s) 824
HincII GTYRAC 4 cut(s) 270, 287, 401, 798
HindII GTYRAC 4 cut(s) 270, 287, 401, 798
HindIII AAGCTT 1 cut(s) 152
HinfI GANTC 5 cut(s) 54, 230, 532, 958, 1067
HpaII CCGG 1 cut(s) 365
HphI GGTGA 4 cut(s) 41, 722, 862, 1094
Hpy166II GTNNAC 6 cut(s) 62, 270, 287, 401, 787, 798
Hpy188I TCNGA 2 cut(s) 206, 748
Hpy188III TCNNGA 7 cut(s) 234, 381, 587, 679, 878, 1050, 1109
Hpy8I GTNNAC 6 cut(s) 62, 270, 287, 401, 787, 798
Hpy99I CGWCG 1 cut(s) 288
HpyAV CCTTC 3 cut(s) 384, 696, 1158
HpyCH4III ACNGT 5 cut(s) 44, 66, 176, 430, 757
HpyCH4V TGCA 7 cut(s) 158, 328, 467, 595, 1034, 1046, 1057
HpyF10VI GCNNNNNNNGC 3 cut(s) 347, 464, 1140
HpyF3I CTNAG 1 cut(s) 50
Hsp92II CATG 6 cut(s) 320, 590, 643, 951, 1112, 1173
HspAI GCGC 1 cut(s) 824
Ksp22I TGATCA 1 cut(s) 1105
KspI CCGCGG 1 cut(s) 1161
Kzo9I GATC 3 cut(s) 1007, 1084, 1105
LmnI GCTCC 4 cut(s) 977, 995, 1028, 1100
Lsp1109I GCAGC 4 cut(s) 362, 492, 1018, 1127
LweI GCATC 1 cut(s) 1055
MabI ACCWGGT 1 cut(s) 492
MaeI CTAG 7 cut(s) 108, 224, 381, 599, 855, 878, 1005
MaeIII GTNAC 1 cut(s) 653
MalI GATC 3 cut(s) 1009, 1086, 1107
MboI GATC 3 cut(s) 1007, 1084, 1105
MboII GAAGA 2 cut(s) 821, 1076
MhlI GDGCHC 4 cut(s) 211, 460, 527, 992
MluCI AATT 2 cut(s) 303, 439
MlyI GAGTC 3 cut(s) 63, 967, 1076
MmeI TCCRAC 1 cut(s) 744
MseI TTAA 3 cut(s) 185, 776, 918
MspA1I CMGCKG 2 cut(s) 353, 1160
MspI CCGG 1 cut(s) 365
MspR9I CCNGG 1 cut(s) 494
Mva1269I GAATGC 1 cut(s) 1059
MvaI CCWGG 1 cut(s) 494
MvnI CGCG 1 cut(s) 1160
MwoI GCNNNNNNNGC 3 cut(s) 347, 464, 1140
NdeII GATC 3 cut(s) 1007, 1084, 1105
NlaIII CATG 6 cut(s) 320, 590, 643, 951, 1112, 1173
NlaIV GGNNCC 7 cut(s) 37, 704, 944, 991, 1001, 1120, 1166
NspI RCATGY 1 cut(s) 320
PagI TCATGA 2 cut(s) 586, 1108
PctI GAATGC 1 cut(s) 1059
PfeI GAWTC 2 cut(s) 230, 532
PkrI GCNGC 5 cut(s) 352, 482, 1033, 1142, 1159
PleI GAGTC 3 cut(s) 62, 966, 1075
PpsI GAGTC 3 cut(s) 62, 966, 1075
PshBI ATTAAT 2 cut(s) 776, 918
Psp6I CCWGG 1 cut(s) 492
PspGI CCWGG 1 cut(s) 492
PspN4I GGNNCC 7 cut(s) 37, 704, 944, 991, 1001, 1120, 1166
PspPI GGNCC 2 cut(s) 702, 999
RsaI GTAC 1 cut(s) 63
RsaNI GTAC 1 cut(s) 62
SacII CCGCGG 1 cut(s) 1161
SalI GTCGAC 1 cut(s) 285
SaqAI TTAA 3 cut(s) 185, 776, 918
SatI GCNGC 5 cut(s) 351, 481, 1032, 1141, 1158
Sau3AI GATC 3 cut(s) 1007, 1084, 1105
Sau96I GGNCC 2 cut(s) 702, 999
SchI GAGTC 3 cut(s) 63, 967, 1076
ScrFI CCNGG 1 cut(s) 494
SduI GDGCHC 4 cut(s) 211, 460, 527, 992
SexAI ACCWGGT 1 cut(s) 492
SfaNI GCATC 1 cut(s) 1055
SfcI CTRYAG 2 cut(s) 40, 994
Sfr303I CCGCGG 1 cut(s) 1161
SgrBI CCGCGG 1 cut(s) 1161
SinI GGWCC 1 cut(s) 702
SmlI CTYRAG 3 cut(s) 450, 955, 1128
SmoI CTYRAG 3 cut(s) 450, 955, 1128
Sse9I AATT 2 cut(s) 303, 439
SsiI CCGC 5 cut(s) 320, 353, 1134, 1158, 1160
SspI AATATT 1 cut(s) 922
SspMI CTAG 7 cut(s) 108, 224, 381, 599, 855, 878, 1005
StyD4I CCNGG 1 cut(s) 492
TaaI ACNGT 5 cut(s) 44, 66, 176, 430, 757
TaqI TCGA 5 cut(s) 69, 286, 1051, 1062, 1151
TasI AATT 2 cut(s) 303, 439
TatI WGTACW 1 cut(s) 61
TauI GCSGC 1 cut(s) 1160
TfiI GAWTC 2 cut(s) 230, 532
Tru1I TTAA 3 cut(s) 185, 776, 918
Tru9I TTAA 3 cut(s) 185, 776, 918
TscAI CASTG 2 cut(s) 179, 760
TseI GCWGC 4 cut(s) 350, 480, 1031, 1140
TspDTI ATGAA 5 cut(s) 162, 255, 612, 628, 1089
TspGWI ACGGA 2 cut(s) 47, 400
TspRI CASTG 2 cut(s) 179, 760
VpaK11BI GGWCC 1 cut(s) 702
VspI ATTAAT 2 cut(s) 776, 918
XapI RAATTY 1 cut(s) 439
XbaI TCTAGA 2 cut(s) 380, 877
XceI RCATGY 1 cut(s) 320
XcmI CCANNNNNNNNNTGG 2 cut(s) 566, 982
XmiI GTMKAC 1 cut(s) 286
XspI CTAG 7 cut(s) 108, 224, 381, 599, 855, 878, 1005
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.