Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 496 |
| AclI | AACGTT | 1 cut(s) | 171 |
| AclWI | GGATC | 1 cut(s) | 407 |
| AcoI | YGGCCR | 1 cut(s) | 269 |
| AcsI | RAATTY | 1 cut(s) | 213 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 406, 511, 512 |
| AgsI | TTSAA | 4 cut(s) | 21, 68, 155, 404 |
| AjnI | CCWGG | 1 cut(s) | 230 |
| AluBI | AGCT | 2 cut(s) | 75, 311 |
| AluI | AGCT | 2 cut(s) | 75, 311 |
| AlwI | GGATC | 1 cut(s) | 407 |
| Ama87I | CYCGRG | 1 cut(s) | 510 |
| AoxI | GGCC | 2 cut(s) | 49, 269 |
| ApeKI | GCWGC | 1 cut(s) | 299 |
| ApoI | RAATTY | 1 cut(s) | 213 |
| AseI | ATTAAT | 1 cut(s) | 479 |
| AvaI | CYCGRG | 1 cut(s) | 510 |
| BalI | TGGCCA | 1 cut(s) | 271 |
| BanI | GGYRCC | 1 cut(s) | 496 |
| BanII | GRGCYC | 1 cut(s) | 518 |
| BbvI | GCAGC | 1 cut(s) | 286 |
| BccI | CCATC | 4 cut(s) | 37, 41, 188, 280 |
| BciT130I | CCWGG | 1 cut(s) | 232 |
| BciVI | GTATCC | 2 cut(s) | 315, 330 |
| BclI | TGATCA | 1 cut(s) | 304 |
| BfaI | CTAG | 1 cut(s) | 207 |
| BfuI | GTATCC | 2 cut(s) | 315, 330 |
| BglII | AGATCT | 1 cut(s) | 92 |
| BisI | GCNGC | 1 cut(s) | 300 |
| BlsI | GCNGC | 1 cut(s) | 301 |
| Bme1390I | CCNGG | 1 cut(s) | 232 |
| BmeT110I | CYCGRG | 1 cut(s) | 510 |
| BmiI | GGNNCC | 2 cut(s) | 498, 517 |
| BmrFI | CCNGG | 1 cut(s) | 232 |
| BmsI | GCATC | 1 cut(s) | 114 |
| BpuEI | CTTGAG | 1 cut(s) | 463 |
| BsaJI | CCNNGG | 1 cut(s) | 230 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 406, 511, 512 |
| Bse1I | ACTGG | 1 cut(s) | 323 |
| Bse3DI | GCAATG | 1 cut(s) | 294 |
| BseBI | CCWGG | 1 cut(s) | 232 |
| BseDI | CCNNGG | 1 cut(s) | 230 |
| BseGI | GGATG | 2 cut(s) | 52, 105 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 406, 511, 512 |
| BseMI | GCAATG | 1 cut(s) | 294 |
| BseNI | ACTGG | 1 cut(s) | 323 |
| BseRI | GAGGAG | 1 cut(s) | 101 |
| BseXI | GCAGC | 1 cut(s) | 286 |
| BshFI | GGCC | 2 cut(s) | 51, 271 |
| BshNI | GGYRCC | 1 cut(s) | 496 |
| BsiHKCI | CYCGRG | 1 cut(s) | 510 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 406, 511, 512 |
| BsmI | GAATGC | 1 cut(s) | 370 |
| BsnI | GGCC | 2 cut(s) | 51, 271 |
| BsoBI | CYCGRG | 1 cut(s) | 510 |
| Bsp1286I | GDGCHC | 1 cut(s) | 518 |
| Bsp143I | GATC | 3 cut(s) | 92, 304, 412 |
| BspANI | GGCC | 2 cut(s) | 51, 271 |
| BspLI | GGNNCC | 2 cut(s) | 498, 517 |
| BspPI | GGATC | 1 cut(s) | 407 |
| BspT107I | GGYRCC | 1 cut(s) | 496 |
| BsrDI | GCAATG | 1 cut(s) | 294 |
| BsrI | ACTGG | 1 cut(s) | 323 |
| BssECI | CCNNGG | 1 cut(s) | 230 |
| BssMI | GATC | 3 cut(s) | 92, 304, 412 |
| Bst2UI | CCWGG | 1 cut(s) | 232 |
| Bst4CI | ACNGT | 1 cut(s) | 187 |
| Bst6I | CTCTTC | 1 cut(s) | 19 |
| BstF5I | GGATG | 2 cut(s) | 52, 105 |
| BstKTI | GATC | 3 cut(s) | 95, 307, 415 |
| BstMBI | GATC | 3 cut(s) | 92, 304, 412 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 308 |
| BstNI | CCWGG | 1 cut(s) | 232 |
| BstSCI | CCNGG | 1 cut(s) | 230 |
| BstV1I | GCAGC | 1 cut(s) | 286 |
| BstX2I | RGATCY | 2 cut(s) | 92, 412 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 116, 187, 376 |
| BstYI | RGATCY | 2 cut(s) | 92, 412 |
| BsuI | GTATCC | 2 cut(s) | 315, 330 |
| BsuRI | GGCC | 2 cut(s) | 51, 271 |
| BtsCI | GGATG | 2 cut(s) | 52, 105 |
| CviAII | CATG | 2 cut(s) | 259, 501 |
| CviJI | RGCY | 7 cut(s) | 51, 75, 124, 271, 311, 329, 516 |
| CviKI_1 | RGCY | 7 cut(s) | 51, 75, 124, 271, 311, 329, 516 |
| DpnI | GATC | 3 cut(s) | 94, 306, 414 |
| DpnII | GATC | 3 cut(s) | 92, 304, 412 |
| EaeI | YGGCCR | 1 cut(s) | 269 |
| Eam1104I | CTCTTC | 1 cut(s) | 19 |
| EarI | CTCTTC | 1 cut(s) | 19 |
| Eco24I | GRGCYC | 1 cut(s) | 518 |
| Eco88I | CYCGRG | 1 cut(s) | 510 |
| EcoRII | CCWGG | 1 cut(s) | 230 |
| EcoT38I | GRGCYC | 1 cut(s) | 518 |
| FaeI | CATG | 2 cut(s) | 262, 504 |
| FaiI | YATR | 9 cut(s) | 177, 249, 260, 333, 356, 425, 487, 502, 522 |
| FatI | CATG | 2 cut(s) | 258, 500 |
| FbaI | TGATCA | 1 cut(s) | 304 |
| Fnu4HI | GCNGC | 1 cut(s) | 300 |
| FokI | GGATG | 2 cut(s) | 59, 92 |
| FriOI | GRGCYC | 1 cut(s) | 518 |
| Fsp4HI | GCNGC | 1 cut(s) | 300 |
| FspBI | CTAG | 1 cut(s) | 207 |
| GluI | GCNGC | 1 cut(s) | 300 |
| HaeIII | GGCC | 2 cut(s) | 51, 271 |
| Hin1II | CATG | 2 cut(s) | 262, 504 |
| HinfI | GANTC | 1 cut(s) | 464 |
| Hpy166II | GTNNAC | 2 cut(s) | 280, 316 |
| Hpy188I | TCNGA | 1 cut(s) | 97 |
| Hpy188III | TCNNGA | 2 cut(s) | 287, 442 |
| Hpy8I | GTNNAC | 2 cut(s) | 280, 316 |
| HpyAV | CCTTC | 1 cut(s) | 19 |
| HpyCH4III | ACNGT | 1 cut(s) | 187 |
| HpyCH4IV | ACGT | 2 cut(s) | 62, 171 |
| HpyCH4V | TGCA | 1 cut(s) | 131 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 308 |
| HpySE526I | ACGT | 2 cut(s) | 62, 171 |
| Hsp92II | CATG | 2 cut(s) | 262, 504 |
| Ksp22I | TGATCA | 1 cut(s) | 304 |
| Kzo9I | GATC | 3 cut(s) | 92, 304, 412 |
| LmnI | GCTCC | 1 cut(s) | 521 |
| LpnPI | CCDG | 9 cut(s) | 133, 217, 226, 244, 304, 311, 362, 382, 429 |
| Lsp1109I | GCAGC | 1 cut(s) | 286 |
| LweI | GCATC | 1 cut(s) | 114 |
| MaeI | CTAG | 1 cut(s) | 207 |
| MaeII | ACGT | 2 cut(s) | 62, 171 |
| MalI | GATC | 3 cut(s) | 94, 306, 414 |
| MboI | GATC | 3 cut(s) | 92, 304, 412 |
| MboII | GAAGA | 6 cut(s) | 6, 9, 47, 80, 373, 422 |
| MflI | RGATCY | 2 cut(s) | 92, 412 |
| MhlI | GDGCHC | 1 cut(s) | 518 |
| MlsI | TGGCCA | 1 cut(s) | 271 |
| MluCI | AATT | 5 cut(s) | 126, 213, 346, 387, 480 |
| MluNI | TGGCCA | 1 cut(s) | 271 |
| MlyI | GAGTC | 1 cut(s) | 458 |
| MnlI | CCTC | 6 cut(s) | 62, 79, 114, 133, 187, 214 |
| Mox20I | TGGCCA | 1 cut(s) | 271 |
| MscI | TGGCCA | 1 cut(s) | 271 |
| MseI | TTAA | 2 cut(s) | 449, 479 |
| MslI | CAYNNNNRTG | 1 cut(s) | 185 |
| Msp20I | TGGCCA | 1 cut(s) | 271 |
| MspR9I | CCNGG | 1 cut(s) | 232 |
| Mva1269I | GAATGC | 1 cut(s) | 370 |
| MvaI | CCWGG | 1 cut(s) | 232 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 308 |
| NdeII | GATC | 3 cut(s) | 92, 304, 412 |
| NlaIII | CATG | 2 cut(s) | 262, 504 |
| NlaIV | GGNNCC | 2 cut(s) | 498, 517 |
| PctI | GAATGC | 1 cut(s) | 370 |
| PkrI | GCNGC | 1 cut(s) | 301 |
| PleI | GAGTC | 1 cut(s) | 458 |
| PpsI | GAGTC | 1 cut(s) | 458 |
| PshBI | ATTAAT | 1 cut(s) | 479 |
| Psp1406I | AACGTT | 1 cut(s) | 171 |
| Psp6I | CCWGG | 1 cut(s) | 230 |
| PspGI | CCWGG | 1 cut(s) | 230 |
| PspN4I | GGNNCC | 2 cut(s) | 498, 517 |
| PsuI | RGATCY | 2 cut(s) | 92, 412 |
| RseI | CAYNNNNRTG | 1 cut(s) | 185 |
| SaqAI | TTAA | 2 cut(s) | 449, 479 |
| SatI | GCNGC | 1 cut(s) | 300 |
| Sau3AI | GATC | 3 cut(s) | 92, 304, 412 |
| SchI | GAGTC | 1 cut(s) | 458 |
| ScrFI | CCNGG | 1 cut(s) | 232 |
| SduI | GDGCHC | 1 cut(s) | 518 |
| SetI | ASST | 5 cut(s) | 65, 77, 144, 174, 313 |
| SfaNI | GCATC | 1 cut(s) | 114 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 185 |
| SmlI | CTYRAG | 1 cut(s) | 442 |
| SmoI | CTYRAG | 1 cut(s) | 442 |
| Sse9I | AATT | 5 cut(s) | 126, 213, 346, 387, 480 |
| SspI | AATATT | 1 cut(s) | 58 |
| SspMI | CTAG | 1 cut(s) | 207 |
| StyD4I | CCNGG | 1 cut(s) | 230 |
| TaaI | ACNGT | 1 cut(s) | 187 |
| TaiI | ACGT | 2 cut(s) | 65, 174 |
| TaqI | TCGA | 2 cut(s) | 462, 472 |
| TasI | AATT | 5 cut(s) | 126, 213, 346, 387, 480 |
| Tru1I | TTAA | 2 cut(s) | 449, 479 |
| Tru9I | TTAA | 2 cut(s) | 449, 479 |
| TseI | GCWGC | 1 cut(s) | 299 |
| TspDTI | ATGAA | 2 cut(s) | 226, 275 |
| VspI | ATTAAT | 1 cut(s) | 479 |
| XapI | RAATTY | 1 cut(s) | 213 |
| XspI | CTAG | 1 cut(s) | 207 |