RLG00000001040

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000073
Physical Location & Seq
Reverse (-)
9611985 .. 9616925
4941 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001040

Sequence Viewer

Length: 1839 bp
ATGCCGGTTCCTGGAATTGAACACTCTGACCCTGACAACCGCGACTATGATTCTTGGATTACCCTCCGACTTCCCGATCGTCTTCCACCTCTGGTACGACGACATCCGACGCCAGACCCACTGGTTCTGGAGGACGACAATAATGATCGATGTGGTACCAAACATAGGAGGAATAAAGGGTTCACTCCGAACCTCCTGGAGATATCTTGGTGCAATCAAAGTGGCACACATCCACCACAACATCTTCTCCATAAAGGCATCACCTGCAGATGCAACAACCCTCCTTGTGGTGGCCCCTGGCATGTTGACAACATGAGATTCAATGTGGTCAAATGGCTGCCAACACTCACTATCAGTGATGTTCATTTCCACATGGTCTCGTATTGGGTTCAGATATCCGGGCTTACAAGGGAGAAAATGAATACAAAGAATGCTTTGTTGATCGGCTCGGAGATTGGAACTATTTTGGAAGTGGAAGACCCAAGCGTTGTTGATGCTACTCTTAGGGGCTACCTGAGGGTAAAAGTCCTCTTGGATTCCAGAAACCCACTACCAACTGGTTTCTGGCTTCCTCTCAATGAATACACTTCTACAAGAGTCGATTATGCCTTTGAGGGGCTATATGATTTTTGCTACAAATGTGGGAAACTTGGCCACCATTTAGATGTCTGCAAAAATTTCCGAATCCTCAATCCGGAGGATGGTGAACCAGAGAATATCTGGTATGGTCCATGGATGAAGACGAAGTCCGTCTCGGTGAAGCAACTTTCTTGGCTTGACCGGCCAGAGCGAGTTAATCGGAGAAAGCCCAAGACCAAGAGGGTCACGGGTACTTACCCAGATTCCCCATACCCATCAGTGGCTGGTCCAAGTCGTCAAACCCAAGGTACCAGGCATAATTCAAACTCTGTAGACATCGACCTGTCTCTCCCTCTGATCTCTGAACCAGCTGATGGTGACATGACCTCCCAAATTTCAAATTCAATCTGCCCCCCCATGTTACACAATTATCCAAAGGACAAGCTGCTCCCGACCCCACCGGTGACCCATGCCTCATCTCTGAAGGTACACCCATTTCCTAGCCCTAACTGGCTAAAACTTGCTGTCACAACAACCAAAACTCATGTCGAGTGGACTAGAAGAGTCAATCCCCCACCAATGAGTGTCAAACCATGGCCCAATGGGTCACAACCCTCAGTGGCTGATAATCCTGAGGCCCAAGCCACTTTAGGCCCAAGCCACTTTAGGCCTGTATTACTGGGGAATGGTAAGGGAAAACCCCCAACGTACCGTTTTTCTCCTACCTCTCTTGATCAGATTCAGACTTTAGCAATTAAACCTCCTCACCCGACTCAACCAACCACCCACCCAACTTTTAAGTCCTCACCCCCATTTCACCCATCAGCCAAAAGACTGTACTCTCAAACCTTTACCACCACAAACCCAAGACATCCCAAAACCCGTTCTCTTTCAACACTCAACTCCAATTCTACTTCGGAGGACAATTGGGACCCAACTCCCCCGGTTCTTACCCCTTCCAAAGCTGGTCTTTCAAGAGGCAGAGGTCGCCCACGTGGTAGAGGCAGAGGAGCCGGTGGGAGGCACTCAGTGGTTTCAACTCCGGTAACCAGAAGTGGCAGATTTGTTTCGAAAAAAAGGAGGTTTGATCCTTCCCCAAGCTCTGAACACAATTTGGGTGAATTTCAAGAGATTAGAGTCGAATGTTTGGATGACTCGTCAGAATTACGTTATGAAGCTCCCGGACAGGTTAATGATCTGGAGGATCTCTCCCCCCTCCAGGGCGGTGGTGGCTGGCCTACAGCCACAAGGAGTCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4 zf-RING_2

Protein Analysis

613

Amino Acids

68.53

Weight (kDa)

9.39

Isoelectric Point (pI)

50.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 272
Acc36I ACCTGC 1 cut(s) 272
Acc65I GGTACC 2 cut(s) 155, 887
AccB1I GGYRCC 2 cut(s) 155, 887
AccB7I CCANNNNNTGG 1 cut(s) 953
AccI GTMKAC 1 cut(s) 912
AccII CGCG 1 cut(s) 42
AccIII TCCGGA 1 cut(s) 694
AciI CCGC 2 cut(s) 40, 1803
AclWI GGATC 2 cut(s) 1661, 1791
AcoI YGGCCR 2 cut(s) 652, 782
AcsI RAATTY 4 cut(s) 676, 972, 979, 1700
AcuI CTGAAG 1 cut(s) 1082
AcvI CACGTG 1 cut(s) 1574
AcyI GRCGYC 1 cut(s) 110
AdeI CACNNNGTG 1 cut(s) 1609
AfaI GTAC 7 cut(s) 96, 157, 832, 889, 1068, 1289, 1418
AgeI ACCGGT 1 cut(s) 1039
AgsI TTSAA 9 cut(s) 20, 322, 903, 978, 984, 1473, 1554, 1617, 1706
AjnI CCWGG 5 cut(s) 10, 195, 296, 890, 1797
AluBI AGCT 5 cut(s) 950, 1024, 1544, 1680, 1757
AluI AGCT 5 cut(s) 950, 1024, 1544, 1680, 1757
Alw26I GTCTC 3 cut(s) 382, 757, 930
AlwI GGATC 2 cut(s) 1661, 1791
AlwNI CAGNNNCTG 2 cut(s) 863, 1202
Aor13HI TCCGGA 1 cut(s) 694
AoxI GGCC 8 cut(s) 292, 652, 782, 1175, 1215, 1231, 1247, 1814
ApeKI GCWGC 2 cut(s) 337, 1024
ApoI RAATTY 4 cut(s) 676, 972, 979, 1700
ArsI GACNNNNNNTTYG 2 cut(s) 1110, 1142
AsiGI ACCGGT 1 cut(s) 1039
Asp718I GGTACC 2 cut(s) 155, 887
AspS9I GGNCC 7 cut(s) 293, 728, 866, 1176, 1216, 1232, 1510
AsuC2I CCSGG 3 cut(s) 400, 1523, 1761
AsuHPI GGTGA 9 cut(s) 253, 716, 769, 968, 1054, 1337, 1377, 1388, 1709
AsuII TTCGAA 1 cut(s) 1649
AvaII GGWCC 3 cut(s) 728, 866, 1510
AxyI CCTNAGG 2 cut(s) 515, 1212
BalI TGGCCA 1 cut(s) 654
BanI GGYRCC 2 cut(s) 155, 887
BbrPI CACGTG 1 cut(s) 1574
BbsI GAAGAC 3 cut(s) 74, 483, 746
BbvI GCAGC 2 cut(s) 324, 1011
BccI CCATC 4 cut(s) 695, 862, 947, 1408
BciT130I CCWGG 5 cut(s) 12, 197, 298, 892, 1799
BclI TGATCA 1 cut(s) 1312
BcnI CCSGG 3 cut(s) 400, 1523, 1761
BcoDI GTCTC 3 cut(s) 382, 757, 930
BfaI CTAG 2 cut(s) 1080, 1137
BfmI CTRYAG 3 cut(s) 265, 909, 1818
BfuAI ACCTGC 1 cut(s) 272
BisI GCNGC 2 cut(s) 338, 1025
BlsI GCNGC 2 cut(s) 339, 1026
Bme1390I CCNGG 8 cut(s) 12, 197, 298, 400, 892, 1523, 1761, 1799
Bme18I GGWCC 3 cut(s) 728, 866, 1510
BmgT120I GGNCC 7 cut(s) 293, 728, 866, 1176, 1216, 1232, 1510
BmiI GGNNCC 7 cut(s) 9, 157, 295, 889, 1511, 1512, 1591
BmrFI CCNGG 8 cut(s) 12, 197, 298, 400, 892, 1523, 1761, 1799
BmrI ACTGGG 1 cut(s) 1268
BmsI GCATC 3 cut(s) 260, 267, 484
BmuI ACTGGG 1 cut(s) 1268
BpiI GAAGAC 3 cut(s) 74, 483, 746
BplI GAGNNNNNCTC 2 cut(s) 1772, 1804
BpmI CTGGAG 4 cut(s) 149, 218, 1781, 1799
Bpu14I TTCGAA 1 cut(s) 1649
BpuMI CCSGG 3 cut(s) 400, 1523, 1761
Bsa29I ATCGAT 1 cut(s) 148
BsaAI YACGTR 1 cut(s) 1574
BsaHI GRCGYC 1 cut(s) 110
BsaI GGTCTC 1 cut(s) 382
BsaJI CCNNGG 6 cut(s) 296, 731, 883, 1172, 1521, 1798
BsaWI WCCGGW 3 cut(s) 694, 1039, 1621
BsaXI ACNNNNNCTCC 4 cut(s) 231, 261, 950, 980
Bse118I RCCGGY 4 cut(s) 4, 780, 1039, 1592
Bse1I ACTGG 4 cut(s) 126, 562, 1094, 1263
Bse21I CCTNAGG 2 cut(s) 515, 1212
BseAI TCCGGA 1 cut(s) 694
BseBI CCWGG 5 cut(s) 12, 197, 298, 892, 1799
BseCI ATCGAT 1 cut(s) 148
BseDI CCNNGG 6 cut(s) 296, 731, 883, 1172, 1521, 1798
BseGI GGATG 6 cut(s) 103, 229, 706, 741, 1450, 1735
BseMII CTCAG 4 cut(s) 506, 1203, 1209, 1620
BseNI ACTGG 4 cut(s) 126, 562, 1094, 1263
BseRI GAGGAG 2 cut(s) 1332, 1602
BseXI GCAGC 2 cut(s) 324, 1011
Bsh1236I CGCG 1 cut(s) 42
Bsh1285I CGRYCG 1 cut(s) 79
BshFI GGCC 8 cut(s) 294, 654, 784, 1177, 1217, 1233, 1249, 1816
BshNI GGYRCC 2 cut(s) 155, 887
BshTI ACCGGT 1 cut(s) 1039
BshVI ATCGAT 1 cut(s) 148
BsiEI CGRYCG 1 cut(s) 79
BsiSI CCGG 9 cut(s) 5, 399, 695, 781, 1040, 1523, 1593, 1622, 1761
BslFI GGGAC 1 cut(s) 1523
BsmAI GTCTC 3 cut(s) 382, 757, 930
BsmBI CGTCTC 1 cut(s) 757
BsmFI GGGAC 1 cut(s) 1523
BsmI GAATGC 1 cut(s) 436
BsnI GGCC 8 cut(s) 294, 654, 784, 1177, 1217, 1233, 1249, 1816
Bso31I GGTCTC 1 cut(s) 382
Bsp119I TTCGAA 1 cut(s) 1649
Bsp13I TCCGGA 1 cut(s) 694
Bsp143I GATC 8 cut(s) 76, 145, 441, 936, 1312, 1666, 1774, 1783
Bsp19I CCATGG 2 cut(s) 731, 1172
BspACI CCGC 2 cut(s) 40, 1803
BspANI GGCC 8 cut(s) 294, 654, 784, 1177, 1217, 1233, 1249, 1816
BspCNI CTCAG 4 cut(s) 507, 1204, 1208, 1619
BspDI ATCGAT 1 cut(s) 148
BspEI TCCGGA 1 cut(s) 694
BspFNI CGCG 1 cut(s) 42
BspLI GGNNCC 7 cut(s) 9, 157, 295, 889, 1511, 1512, 1591
BspMAI CTGCAG 1 cut(s) 269
BspMI ACCTGC 1 cut(s) 272
BspPI GGATC 2 cut(s) 1661, 1791
BspT104I TTCGAA 1 cut(s) 1649
BspT107I GGYRCC 2 cut(s) 155, 887
BspTNI GGTCTC 1 cut(s) 382
BsrFI RCCGGY 4 cut(s) 4, 780, 1039, 1592
BsrI ACTGG 4 cut(s) 126, 562, 1094, 1263
BssAI RCCGGY 4 cut(s) 4, 780, 1039, 1592
BssECI CCNNGG 6 cut(s) 296, 731, 883, 1172, 1521, 1798
BssMI GATC 8 cut(s) 76, 145, 441, 936, 1312, 1666, 1774, 1783
BssNI GRCGYC 1 cut(s) 110
BssT1I CCWWGG 3 cut(s) 731, 883, 1172
Bst2UI CCWGG 5 cut(s) 12, 197, 298, 892, 1799
Bst4CI ACNGT 2 cut(s) 1292, 1416
Bst6I CTCTTC 1 cut(s) 1135
BstACI GRCGYC 1 cut(s) 110
BstAPI GCANNNNNTGC 1 cut(s) 264
BstBAI YACGTR 1 cut(s) 1574
BstBI TTCGAA 1 cut(s) 1649
BstC8I GCNNGC 1 cut(s) 1814
BstDEI CTNAG 5 cut(s) 503, 515, 1195, 1212, 1606
BstDSI CCRYGG 2 cut(s) 731, 1172
BstEII GGTNACC 2 cut(s) 1042, 1624
BstF5I GGATG 6 cut(s) 103, 229, 706, 741, 1450, 1735
BstFNI CGCG 1 cut(s) 42
BstKTI GATC 8 cut(s) 79, 148, 444, 939, 1315, 1669, 1777, 1786
BstMAI GTCTC 3 cut(s) 382, 757, 930
BstMBI GATC 8 cut(s) 76, 145, 441, 936, 1312, 1666, 1774, 1783
BstMCI CGRYCG 1 cut(s) 79
BstMWI GCNNNNNNNGC 4 cut(s) 264, 781, 1566, 1809
BstNI CCWGG 5 cut(s) 12, 197, 298, 892, 1799
BstNSI RCATGY 1 cut(s) 305
BstPI GGTNACC 2 cut(s) 1042, 1624
BstSCI CCNGG 8 cut(s) 10, 195, 296, 398, 890, 1521, 1759, 1797
BstSFI CTRYAG 3 cut(s) 265, 909, 1818
BstUI CGCG 1 cut(s) 42
BstV1I GCAGC 2 cut(s) 324, 1011
BstV2I GAAGAC 3 cut(s) 74, 483, 746
BstX2I RGATCY 1 cut(s) 1783
BstXI CCANNNNNNTGG 1 cut(s) 1805
BstYI RGATCY 1 cut(s) 1783
Bsu15I ATCGAT 1 cut(s) 148
Bsu36I CCTNAGG 2 cut(s) 515, 1212
BsuRI GGCC 8 cut(s) 294, 654, 784, 1177, 1217, 1233, 1249, 1816
BsuTUI ATCGAT 1 cut(s) 148
BtgI CCRYGG 2 cut(s) 731, 1172
BtsCI GGATG 6 cut(s) 103, 229, 706, 741, 1450, 1735
BtsIMutI CAGTG 5 cut(s) 119, 361, 864, 1203, 1614
BveI ACCTGC 1 cut(s) 272
Cac8I GCNNGC 1 cut(s) 1814
CaiI CAGNNNCTG 2 cut(s) 863, 1202
Cfr10I RCCGGY 4 cut(s) 4, 780, 1039, 1592
Cfr13I GGNCC 7 cut(s) 293, 728, 866, 1176, 1216, 1232, 1510
ClaI ATCGAT 1 cut(s) 148
CseI GACGC 1 cut(s) 118
Csp6I GTAC 7 cut(s) 95, 156, 831, 888, 1067, 1288, 1417
CspAI ACCGGT 1 cut(s) 1039
CspCI CAANNNNNGTGG 2 cut(s) 202, 237
CviAII CATG 9 cut(s) 302, 313, 373, 732, 961, 997, 1049, 1124, 1173
CviQI GTAC 7 cut(s) 95, 156, 831, 888, 1067, 1288, 1417
DdeI CTNAG 5 cut(s) 503, 515, 1195, 1212, 1606
DpnI GATC 8 cut(s) 78, 147, 443, 938, 1314, 1668, 1776, 1785
DpnII GATC 8 cut(s) 76, 145, 441, 936, 1312, 1666, 1774, 1783
DraIII CACNNNGTG 1 cut(s) 1609
EaeI YGGCCR 2 cut(s) 652, 782
Eam1104I CTCTTC 1 cut(s) 1135
EarI CTCTTC 1 cut(s) 1135
Eco130I CCWWGG 3 cut(s) 731, 883, 1172
Eco147I AGGCCT 1 cut(s) 1249
Eco31I GGTCTC 1 cut(s) 382
Eco32I GATATC 2 cut(s) 204, 396
Eco47I GGWCC 3 cut(s) 728, 866, 1510
Eco57I CTGAAG 1 cut(s) 1082
Eco72I CACGTG 1 cut(s) 1574
Eco81I CCTNAGG 2 cut(s) 515, 1212
Eco91I GGTNACC 2 cut(s) 1042, 1624
EcoO109I RGGNCCY 1 cut(s) 1510
EcoO65I GGTNACC 2 cut(s) 1042, 1624
EcoRII CCWGG 5 cut(s) 10, 195, 296, 890, 1797
EcoRV GATATC 2 cut(s) 204, 396
EcoT14I CCWWGG 3 cut(s) 731, 883, 1172
ErhI CCWWGG 3 cut(s) 731, 883, 1172
Esp3I CGTCTC 1 cut(s) 757
FaeI CATG 9 cut(s) 305, 316, 376, 735, 964, 1000, 1052, 1127, 1176
FalI AAGNNNNNCTT 2 cut(s) 1533, 1565
FaqI GGGAC 1 cut(s) 1523
FatI CATG 9 cut(s) 301, 312, 372, 731, 960, 996, 1048, 1123, 1172
FbaI TGATCA 1 cut(s) 1312
FblI GTMKAC 1 cut(s) 912
Fnu4HI GCNGC 2 cut(s) 338, 1025
FokI GGATG 6 cut(s) 90, 216, 713, 748, 1437, 1742
Fsp4HI GCNGC 2 cut(s) 338, 1025
FspBI CTAG 2 cut(s) 1080, 1137
GluI GCNGC 2 cut(s) 338, 1025
GsuI CTGGAG 4 cut(s) 149, 218, 1781, 1799
HaeIII GGCC 8 cut(s) 294, 654, 784, 1177, 1217, 1233, 1249, 1816
HapII CCGG 9 cut(s) 5, 399, 695, 781, 1040, 1523, 1593, 1622, 1761
HgaI GACGC 1 cut(s) 118
Hin1I GRCGYC 1 cut(s) 110
Hin1II CATG 9 cut(s) 305, 316, 376, 735, 964, 1000, 1052, 1127, 1176
HincII GTYRAC 1 cut(s) 307
HindII GTYRAC 1 cut(s) 307
HpaII CCGG 9 cut(s) 5, 399, 695, 781, 1040, 1523, 1593, 1622, 1761
HphI GGTGA 9 cut(s) 253, 716, 769, 968, 1054, 1337, 1377, 1388, 1709
Hpy166II GTNNAC 6 cut(s) 183, 307, 707, 913, 1069, 1134
Hpy8I GTNNAC 6 cut(s) 183, 307, 707, 913, 1069, 1134
Hpy99I CGWCG 2 cut(s) 102, 112
HpyAV CCTTC 3 cut(s) 1057, 1545, 1680
HpyCH4III ACNGT 2 cut(s) 1292, 1416
HpyCH4IV ACGT 3 cut(s) 1286, 1573, 1747
HpyCH4V TGCA 4 cut(s) 213, 267, 273, 672
HpyF10VI GCNNNNNNNGC 4 cut(s) 264, 781, 1566, 1809
HpyF3I CTNAG 5 cut(s) 503, 515, 1195, 1212, 1606
HpySE526I ACGT 3 cut(s) 1286, 1573, 1747
Hsp92I GRCGYC 1 cut(s) 110
Hsp92II CATG 9 cut(s) 305, 316, 376, 735, 964, 1000, 1052, 1127, 1176
KflI GGGWCCC 1 cut(s) 1510
Kpn2I TCCGGA 1 cut(s) 694
KpnI GGTACC 2 cut(s) 159, 891
Ksp22I TGATCA 1 cut(s) 1312
Kzo9I GATC 8 cut(s) 76, 145, 441, 936, 1312, 1666, 1774, 1783
LmnI GCTCC 3 cut(s) 1032, 1589, 1762
Lsp1109I GCAGC 2 cut(s) 324, 1011
LweI GCATC 3 cut(s) 260, 267, 484
MaeI CTAG 2 cut(s) 1080, 1137
MaeII ACGT 3 cut(s) 1286, 1573, 1747
MaeIII GTNAC 7 cut(s) 823, 956, 999, 1042, 1105, 1185, 1624
MalI GATC 8 cut(s) 78, 147, 443, 938, 1314, 1668, 1776, 1785
MboI GATC 8 cut(s) 76, 145, 441, 936, 1312, 1666, 1774, 1783
MboII GAAGA 5 cut(s) 74, 236, 488, 751, 1152
MfeI CAATTG 1 cut(s) 1504
MflI RGATCY 1 cut(s) 1783
MlsI TGGCCA 1 cut(s) 654
MluNI TGGCCA 1 cut(s) 654
MlyI GAGTC 5 cut(s) 606, 1152, 1345, 1725, 1727
MmeI TCCRAC 2 cut(s) 91, 131
Mox20I TGGCCA 1 cut(s) 654
MroI TCCGGA 1 cut(s) 694
MscI TGGCCA 1 cut(s) 654
MseI TTAA 4 cut(s) 795, 1335, 1377, 1770
MslI CAYNNNNRTG 1 cut(s) 663
Msp20I TGGCCA 1 cut(s) 654
MspA1I CMGCKG 1 cut(s) 950
MspI CCGG 9 cut(s) 5, 399, 695, 781, 1040, 1523, 1593, 1622, 1761
MspR9I CCNGG 8 cut(s) 12, 197, 298, 400, 892, 1523, 1761, 1799
MunI CAATTG 1 cut(s) 1504
Mva1269I GAATGC 1 cut(s) 436
MvaI CCWGG 5 cut(s) 12, 197, 298, 892, 1799
MvnI CGCG 1 cut(s) 42
MwoI GCNNNNNNNGC 4 cut(s) 264, 781, 1566, 1809
NciI CCSGG 3 cut(s) 400, 1523, 1761
NcoI CCATGG 2 cut(s) 731, 1172
NdeII GATC 8 cut(s) 76, 145, 441, 936, 1312, 1666, 1774, 1783
NlaIII CATG 9 cut(s) 305, 316, 376, 735, 964, 1000, 1052, 1127, 1176
NlaIV GGNNCC 7 cut(s) 9, 157, 295, 889, 1511, 1512, 1591
NmuCI GTSAC 5 cut(s) 823, 956, 1042, 1105, 1185
NspI RCATGY 1 cut(s) 305
NspV TTCGAA 1 cut(s) 1649
PaqCI CACCTGC 1 cut(s) 272
PceI AGGCCT 1 cut(s) 1249
PctI GAATGC 1 cut(s) 436
PfeI GAWTC 6 cut(s) 50, 318, 536, 684, 842, 1318
PflFI GACNNNGTC 1 cut(s) 745
PflMI CCANNNNNTGG 1 cut(s) 953
PfoI TCCNGGA 3 cut(s) 10, 195, 1759
PinAI ACCGGT 1 cut(s) 1039
PkrI GCNGC 2 cut(s) 339, 1026
Ple19I CGATCG 1 cut(s) 79
PleI GAGTC 5 cut(s) 605, 1151, 1345, 1724, 1727
PmaCI CACGTG 1 cut(s) 1574
PmlI CACGTG 1 cut(s) 1574
PpsI GAGTC 5 cut(s) 605, 1151, 1345, 1724, 1727
Ppu21I YACGTR 1 cut(s) 1574
PpuMI RGGWCCY 1 cut(s) 1510
Psp5II RGGWCCY 1 cut(s) 1510
Psp6I CCWGG 5 cut(s) 10, 195, 296, 890, 1797
PspCI CACGTG 1 cut(s) 1574
PspEI GGTNACC 2 cut(s) 1042, 1624
PspGI CCWGG 5 cut(s) 10, 195, 296, 890, 1797
PspN4I GGNNCC 7 cut(s) 9, 157, 295, 889, 1511, 1512, 1591
PspPI GGNCC 7 cut(s) 293, 728, 866, 1176, 1216, 1232, 1510
PspPPI RGGWCCY 1 cut(s) 1510
PstI CTGCAG 1 cut(s) 269
PstNI CAGNNNCTG 2 cut(s) 863, 1202
PsuI RGATCY 1 cut(s) 1783
PsyI GACNNNGTC 1 cut(s) 745
PvuI CGATCG 1 cut(s) 79
PvuII CAGCTG 1 cut(s) 950
RsaI GTAC 7 cut(s) 96, 157, 832, 889, 1068, 1289, 1418
RsaNI GTAC 7 cut(s) 95, 156, 831, 888, 1067, 1288, 1417
RseI CAYNNNNRTG 1 cut(s) 663
SaqAI TTAA 4 cut(s) 795, 1335, 1377, 1770
SatI GCNGC 2 cut(s) 338, 1025
Sau3AI GATC 8 cut(s) 76, 145, 441, 936, 1312, 1666, 1774, 1783
Sau96I GGNCC 7 cut(s) 293, 728, 866, 1176, 1216, 1232, 1510
SchI GAGTC 5 cut(s) 606, 1152, 1345, 1725, 1727
ScrFI CCNGG 8 cut(s) 12, 197, 298, 400, 892, 1523, 1761, 1799
SfaNI GCATC 3 cut(s) 260, 267, 484
SfcI CTRYAG 3 cut(s) 265, 909, 1818
SfuI TTCGAA 1 cut(s) 1649
SgrAI CRCCGGYG 1 cut(s) 1039
SinI GGWCC 3 cut(s) 728, 866, 1510
SmiMI CAYNNNNRTG 1 cut(s) 663
SseBI AGGCCT 1 cut(s) 1249
SsiI CCGC 2 cut(s) 40, 1803
SspMI CTAG 2 cut(s) 1080, 1137
StuI AGGCCT 1 cut(s) 1249
StyD4I CCNGG 8 cut(s) 10, 195, 296, 398, 890, 1521, 1759, 1797
StyI CCWWGG 3 cut(s) 731, 883, 1172
TaaI ACNGT 2 cut(s) 1292, 1416
TaiI ACGT 3 cut(s) 1289, 1576, 1750
TaqI TCGA 6 cut(s) 148, 600, 918, 1128, 1649, 1719
TatI WGTACW 1 cut(s) 1416
TfiI GAWTC 6 cut(s) 50, 318, 536, 684, 842, 1318
Tru1I TTAA 4 cut(s) 795, 1335, 1377, 1770
Tru9I TTAA 4 cut(s) 795, 1335, 1377, 1770
TscAI CASTG 5 cut(s) 126, 361, 864, 1203, 1614
TseFI GTSAC 5 cut(s) 823, 956, 1042, 1105, 1185
TseI GCWGC 2 cut(s) 337, 1024
Tsp45I GTSAC 5 cut(s) 823, 956, 1042, 1105, 1185
TspDTI ATGAA 5 cut(s) 353, 434, 594, 752, 1767
TspGWI ACGGA 1 cut(s) 739
TspRI CASTG 5 cut(s) 126, 361, 864, 1203, 1614
Tth111I GACNNNGTC 1 cut(s) 745
Van91I CCANNNNNTGG 1 cut(s) 953
VpaK11BI GGWCC 3 cut(s) 728, 866, 1510
XapI RAATTY 4 cut(s) 676, 972, 979, 1700
XceI RCATGY 1 cut(s) 305
XcmI CCANNNNNNNNNTGG 3 cut(s) 561, 717, 1805
XmiI GTMKAC 1 cut(s) 912
XspI CTAG 2 cut(s) 1080, 1137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.