Rh3BG195000

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000073
Physical Location & Seq
Reverse (-)
17243616 .. 17244506
891 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG195000.1

Sequence Viewer

Length: 891 bp
ATGGAGTACTCACCACCAAAGTCCCCTATTTCTACCTTATCTCCGCCCCCATCACCCAAAAATACCCCTACTTCTACCTTCTTTCCCCCACCATCTCCCAACAAATCCTTCCCAGATAATCCTCCGATTCATACCTCAGATGCATTTCCTGAGGGTGAACTCTTTATCCCGCTACCTCTACCTACTCAACCTACTCAAGGCCGTGATACTCAGCTTGTTGGTGCGATCATAGTTGATCGTACCCTCCATGCCCCTTCAGTCATTCAGATTCTTACTACTGCTTGGTCTGAGATTGGACGTTTTTGGGTGGACTTGCTGGGCGGTACCTCTATCTTTTCTATCACAGCTCCTTCTGAGGTGGCAGCTGATCAGGTGCTTGAGCGTGGTCCGTGGTCAGTTATGGGTAGCAATATGGCTATTCATCCTTGGCCTATGACCAGCAGATTGGAGGATATCCCTCTCCACCTCATTACTTTTTGGATTCAGATTCATGGGTTACAGAGGGGTCACATGACTAAAGAAATTGCAAAAATGATCGTTGCTCAAGTGGGGACAGTTCTCTCTGTTGATGATCCTAACTCCCCGTCTGGCAATCCTAGTTATCTCCATGTTAGGGTTCAGGTAGACTCTCGGGCCCCTCTTTCTCCTGGTTTCTGGTTTAGCAACAGTGACACAGAAGCAACTTGGGCAGAAATTCGGTATGAGAGATTGTCCGATTTCTGTTATCGCTGTGGTCGTTTGGGCCATACCATCAGTACTTGTATTTTCAGGAGACATGCATCAACTTATCACCTGGGCCCTTGGATGGCAATTCCTACTCCTCGCAGTCTTCCTCCTAACAATCAACAAAACTGGGATCGCTTCCCTCATCAGGCTTTTGAGCACAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4 zf-RING_2

Protein Analysis

296

Amino Acids

33.07

Weight (kDa)

6.45

Isoelectric Point (pI)

41.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 73 - 149 7.8e-08 Domain of unknown function (DUF4283)
zf-CCHC_4 PF14392 224 - 254 2.5e-08 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 323
AccB1I GGYRCC 1 cut(s) 323
AccI GTMKAC 1 cut(s) 624
AciI CCGC 3 cut(s) 44, 170, 321
AclWI GGATC 2 cut(s) 566, 864
AcsI RAATTY 1 cut(s) 693
AcuI CTGAAG 1 cut(s) 240
AfaI GTAC 4 cut(s) 8, 241, 325, 757
AfiI CCNNNNNNNGG 4 cut(s) 197, 613, 805, 871
AjnI CCWGG 2 cut(s) 646, 792
AjuI GAANNNNNNNTTGG 2 cut(s) 92, 124
AloI GAACNNNNNNTCC 2 cut(s) 150, 182
AluBI AGCT 3 cut(s) 214, 347, 365
AluI AGCT 3 cut(s) 214, 347, 365
Alw21I GWGCWC 1 cut(s) 885
Alw26I GTCTC 1 cut(s) 766
AlwI GGATC 2 cut(s) 566, 864
Ama87I CYCGRG 1 cut(s) 630
AoxI GGCC 5 cut(s) 199, 428, 633, 742, 796
ApaI GGGCCC 2 cut(s) 637, 800
ApeKI GCWGC 1 cut(s) 362
ApoI RAATTY 1 cut(s) 693
Asp718I GGTACC 1 cut(s) 323
AspS9I GGNCC 6 cut(s) 386, 633, 634, 742, 796, 797
AsuHPI GGTGA 4 cut(s) 3, 45, 167, 782
AvaI CYCGRG 1 cut(s) 630
AvaII GGWCC 1 cut(s) 386
AxyI CCTNAGG 1 cut(s) 150
BaeGI GKGCMC 2 cut(s) 637, 800
BanI GGYRCC 1 cut(s) 323
BanII GRGCYC 2 cut(s) 637, 800
BbsI GAAGAC 1 cut(s) 821
Bbv12I GWGCWC 1 cut(s) 885
BbvI GCAGC 1 cut(s) 374
BccI CCATC 4 cut(s) 58, 100, 758, 799
BceAI ACGGC 1 cut(s) 186
BciT130I CCWGG 2 cut(s) 648, 794
BclI TGATCA 1 cut(s) 367
BcoDI GTCTC 1 cut(s) 766
BfaI CTAG 1 cut(s) 597
BisI GCNGC 1 cut(s) 363
BlsI GCNGC 1 cut(s) 364
BmcAI AGTACT 2 cut(s) 8, 757
Bme1390I CCNGG 2 cut(s) 648, 794
Bme18I GGWCC 1 cut(s) 386
BmeT110I CYCGRG 1 cut(s) 630
BmgT120I GGNCC 6 cut(s) 386, 633, 634, 742, 796, 797
BmiI GGNNCC 4 cut(s) 325, 635, 636, 798
BmrFI CCNGG 2 cut(s) 648, 794
BmrI ACTGGG 1 cut(s) 862
BmsI GCATC 2 cut(s) 130, 788
BmuI ACTGGG 1 cut(s) 862
BpiI GAAGAC 1 cut(s) 821
BpuEI CTTGAG 3 cut(s) 180, 398, 528
BsaJI CCNNGG 4 cut(s) 389, 425, 793, 800
BsaXI ACNNNNNCTCC 2 cut(s) 25, 55
Bsc4I CCNNNNNNNGG 4 cut(s) 197, 613, 805, 871
Bse1I ACTGG 1 cut(s) 857
Bse21I CCTNAGG 1 cut(s) 150
BseBI CCWGG 2 cut(s) 648, 794
BseDI CCNNGG 4 cut(s) 389, 425, 793, 800
BseGI GGATG 2 cut(s) 421, 810
BseLI CCNNNNNNNGG 4 cut(s) 197, 613, 805, 871
BseMII CTCAG 5 cut(s) 141, 150, 224, 279, 345
BseNI ACTGG 1 cut(s) 857
BseRI GAGGAG 1 cut(s) 810
BseSI GKGCMC 2 cut(s) 637, 800
BseXI GCAGC 1 cut(s) 374
BseYI CCCAGC 1 cut(s) 316
BshFI GGCC 5 cut(s) 201, 430, 635, 744, 798
BshNI GGYRCC 1 cut(s) 323
BsiHKAI GWGCWC 1 cut(s) 885
BsiHKCI CYCGRG 1 cut(s) 630
BslFI GGGAC 2 cut(s) 7, 565
BslI CCNNNNNNNGG 4 cut(s) 197, 613, 805, 871
BsmAI GTCTC 1 cut(s) 766
BsmFI GGGAC 2 cut(s) 7, 565
BsnI GGCC 5 cut(s) 201, 430, 635, 744, 798
BsoBI CYCGRG 1 cut(s) 630
Bsp120I GGGCCC 2 cut(s) 633, 796
Bsp1286I GDGCHC 3 cut(s) 637, 800, 885
Bsp143I GATC 6 cut(s) 225, 235, 367, 534, 571, 856
BspACI CCGC 3 cut(s) 44, 170, 321
BspANI GGCC 5 cut(s) 201, 430, 635, 744, 798
BspCNI CTCAG 5 cut(s) 142, 149, 223, 280, 346
BspLI GGNNCC 4 cut(s) 325, 635, 636, 798
BspPI GGATC 2 cut(s) 566, 864
BspT107I GGYRCC 1 cut(s) 323
BsrI ACTGG 1 cut(s) 857
BssECI CCNNGG 4 cut(s) 389, 425, 793, 800
BssMI GATC 6 cut(s) 225, 235, 367, 534, 571, 856
BssT1I CCWWGG 2 cut(s) 425, 800
Bst2UI CCWGG 2 cut(s) 648, 794
Bst4CI ACNGT 2 cut(s) 556, 668
BstDEI CTNAG 5 cut(s) 136, 150, 210, 288, 354
BstDSI CCRYGG 1 cut(s) 389
BstENI CCTNNNNNAGG 1 cut(s) 195
BstF5I GGATG 2 cut(s) 421, 810
BstKTI GATC 6 cut(s) 228, 238, 370, 537, 574, 859
BstMAI GTCTC 1 cut(s) 766
BstMBI GATC 6 cut(s) 225, 235, 367, 534, 571, 856
BstMWI GCNNNNNNNGC 1 cut(s) 686
BstNI CCWGG 2 cut(s) 648, 794
BstNSI RCATGY 1 cut(s) 779
BstSCI CCNGG 2 cut(s) 646, 792
BstSLI GKGCMC 2 cut(s) 637, 800
BstV1I GCAGC 1 cut(s) 374
BstV2I GAAGAC 1 cut(s) 821
BstXI CCANNNNNNTGG 1 cut(s) 445
Bsu36I CCTNAGG 1 cut(s) 150
BsuRI GGCC 5 cut(s) 201, 430, 635, 744, 798
BtgI CCRYGG 1 cut(s) 389
BtsCI GGATG 2 cut(s) 421, 810
BtsIMutI CAGTG 1 cut(s) 673
Cfr13I GGNCC 6 cut(s) 386, 633, 634, 742, 796, 797
Csp6I GTAC 4 cut(s) 7, 240, 324, 756
CviAII CATG 5 cut(s) 248, 491, 511, 608, 776
CviQI GTAC 4 cut(s) 7, 240, 324, 756
DdeI CTNAG 5 cut(s) 136, 150, 210, 288, 354
DpnI GATC 6 cut(s) 227, 237, 369, 536, 573, 858
DpnII GATC 6 cut(s) 225, 235, 367, 534, 571, 856
EciI GGCGGA 1 cut(s) 33
Eco130I CCWWGG 2 cut(s) 425, 800
Eco24I GRGCYC 2 cut(s) 637, 800
Eco32I GATATC 1 cut(s) 454
Eco47I GGWCC 1 cut(s) 386
Eco57I CTGAAG 1 cut(s) 240
Eco81I CCTNAGG 1 cut(s) 150
Eco88I CYCGRG 1 cut(s) 630
EcoNI CCTNNNNNAGG 1 cut(s) 195
EcoO109I RGGNCCY 2 cut(s) 634, 797
EcoRII CCWGG 2 cut(s) 646, 792
EcoRV GATATC 1 cut(s) 454
EcoT14I CCWWGG 2 cut(s) 425, 800
EcoT22I ATGCAT 2 cut(s) 145, 781
EcoT38I GRGCYC 2 cut(s) 637, 800
ErhI CCWWGG 2 cut(s) 425, 800
FaeI CATG 5 cut(s) 251, 494, 514, 611, 779
FaqI GGGAC 2 cut(s) 7, 565
FatI CATG 5 cut(s) 247, 490, 510, 607, 775
FauI CCCGC 1 cut(s) 177
FbaI TGATCA 1 cut(s) 367
FblI GTMKAC 1 cut(s) 624
Fnu4HI GCNGC 1 cut(s) 363
FokI GGATG 2 cut(s) 408, 817
FriOI GRGCYC 2 cut(s) 637, 800
Fsp4HI GCNGC 1 cut(s) 363
FspBI CTAG 1 cut(s) 597
GluI GCNGC 1 cut(s) 363
GsaI CCCAGC 1 cut(s) 320
HaeIII GGCC 5 cut(s) 201, 430, 635, 744, 798
Hin1II CATG 5 cut(s) 251, 494, 514, 611, 779
HinfI GANTC 5 cut(s) 127, 268, 481, 487, 626
HphI GGTGA 4 cut(s) 3, 45, 167, 782
Hpy166II GTNNAC 3 cut(s) 158, 310, 625
Hpy188I TCNGA 7 cut(s) 126, 139, 267, 289, 355, 486, 715
Hpy188III TCNNGA 2 cut(s) 149, 769
Hpy8I GTNNAC 3 cut(s) 158, 310, 625
HpyAV CCTTC 4 cut(s) 88, 118, 264, 360
HpyCH4III ACNGT 2 cut(s) 556, 668
HpyCH4IV ACGT 1 cut(s) 298
HpyCH4V TGCA 3 cut(s) 143, 527, 779
HpyF10VI GCNNNNNNNGC 1 cut(s) 686
HpyF3I CTNAG 5 cut(s) 136, 150, 210, 288, 354
HpySE526I ACGT 1 cut(s) 298
Hsp92II CATG 5 cut(s) 251, 494, 514, 611, 779
KpnI GGTACC 1 cut(s) 327
Ksp22I TGATCA 1 cut(s) 367
Kzo9I GATC 6 cut(s) 225, 235, 367, 534, 571, 856
LmnI GCTCC 1 cut(s) 352
Lsp1109I GCAGC 1 cut(s) 374
LweI GCATC 2 cut(s) 130, 788
MaeI CTAG 1 cut(s) 597
MaeII ACGT 1 cut(s) 298
MaeIII GTNAC 3 cut(s) 495, 506, 668
MalI GATC 6 cut(s) 227, 237, 369, 536, 573, 858
MboI GATC 6 cut(s) 225, 235, 367, 534, 571, 856
MboII GAAGA 1 cut(s) 821
MhlI GDGCHC 3 cut(s) 637, 800, 885
MluCI AATT 3 cut(s) 522, 693, 810
MlyI GAGTC 1 cut(s) 620
Mph1103I ATGCAT 2 cut(s) 145, 781
MspA1I CMGCKG 1 cut(s) 365
MspR9I CCNGG 2 cut(s) 648, 794
MvaI CCWGG 2 cut(s) 648, 794
MwoI GCNNNNNNNGC 1 cut(s) 686
NdeII GATC 6 cut(s) 225, 235, 367, 534, 571, 856
NlaIII CATG 5 cut(s) 251, 494, 514, 611, 779
NlaIV GGNNCC 4 cut(s) 325, 635, 636, 798
NmuCI GTSAC 2 cut(s) 506, 668
NsiI ATGCAT 2 cut(s) 145, 781
NspI RCATGY 1 cut(s) 779
PcsI WCGNNNNNNNCGW 1 cut(s) 733
PfeI GAWTC 4 cut(s) 127, 268, 481, 487
PkrI GCNGC 1 cut(s) 364
PleI GAGTC 1 cut(s) 620
PpsI GAGTC 1 cut(s) 620
Psp6I CCWGG 2 cut(s) 646, 792
PspFI CCCAGC 1 cut(s) 316
PspGI CCWGG 2 cut(s) 646, 792
PspN4I GGNNCC 4 cut(s) 325, 635, 636, 798
PspOMI GGGCCC 2 cut(s) 633, 796
PspPI GGNCC 6 cut(s) 386, 633, 634, 742, 796, 797
PvuII CAGCTG 1 cut(s) 365
RsaI GTAC 4 cut(s) 8, 241, 325, 757
RsaNI GTAC 4 cut(s) 7, 240, 324, 756
SatI GCNGC 1 cut(s) 363
Sau3AI GATC 6 cut(s) 225, 235, 367, 534, 571, 856
Sau96I GGNCC 6 cut(s) 386, 633, 634, 742, 796, 797
ScaI AGTACT 2 cut(s) 8, 757
SchI GAGTC 1 cut(s) 620
ScrFI CCNGG 2 cut(s) 648, 794
SduI GDGCHC 3 cut(s) 637, 800, 885
SfaNI GCATC 2 cut(s) 130, 788
SinI GGWCC 1 cut(s) 386
SmlI CTYRAG 3 cut(s) 195, 377, 543
SmoI CTYRAG 3 cut(s) 195, 377, 543
Sse9I AATT 3 cut(s) 522, 693, 810
SsiI CCGC 3 cut(s) 44, 170, 321
SspMI CTAG 1 cut(s) 597
StyD4I CCNGG 2 cut(s) 646, 792
StyI CCWWGG 2 cut(s) 425, 800
TaaI ACNGT 2 cut(s) 556, 668
TaiI ACGT 1 cut(s) 301
TasI AATT 3 cut(s) 522, 693, 810
TatI WGTACW 2 cut(s) 6, 755
TfiI GAWTC 4 cut(s) 127, 268, 481, 487
TscAI CASTG 1 cut(s) 673
TseFI GTSAC 2 cut(s) 506, 668
TseI GCWGC 1 cut(s) 362
Tsp45I GTSAC 2 cut(s) 506, 668
TspDTI ATGAA 3 cut(s) 119, 410, 479
TspGWI ACGGA 1 cut(s) 378
TspRI CASTG 1 cut(s) 673
VpaK11BI GGWCC 1 cut(s) 386
XagI CCTNNNNNAGG 1 cut(s) 195
XapI RAATTY 1 cut(s) 693
XceI RCATGY 1 cut(s) 779
XmiI GTMKAC 1 cut(s) 624
XspI CTAG 1 cut(s) 597
ZrmI AGTACT 2 cut(s) 8, 757
Zsp2I ATGCAT 2 cut(s) 145, 781
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.