Zinc knuckle
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 252 |
| AcuI | CTGAAG | 1 cut(s) | 257 |
| AcyI | GRCGYC | 1 cut(s) | 249 |
| AfaI | GTAC | 1 cut(s) | 175 |
| AgsI | TTSAA | 1 cut(s) | 185 |
| AjnI | CCWGG | 1 cut(s) | 277 |
| AluBI | AGCT | 1 cut(s) | 241 |
| AluI | AGCT | 1 cut(s) | 241 |
| BccI | CCATC | 1 cut(s) | 164 |
| BciT130I | CCWGG | 1 cut(s) | 279 |
| Bme1390I | CCNGG | 1 cut(s) | 279 |
| BmiI | GGNNCC | 2 cut(s) | 128, 152 |
| BmrFI | CCNGG | 1 cut(s) | 279 |
| BmsI | GCATC | 2 cut(s) | 61, 67 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 81, 113 |
| BsaHI | GRCGYC | 1 cut(s) | 249 |
| Bse1I | ACTGG | 1 cut(s) | 145 |
| BseBI | CCWGG | 1 cut(s) | 279 |
| BseGI | GGATG | 1 cut(s) | 49 |
| BseMII | CTCAG | 2 cut(s) | 24, 112 |
| BseNI | ACTGG | 1 cut(s) | 145 |
| BsmI | GAATGC | 1 cut(s) | 10 |
| Bsp143I | GATC | 1 cut(s) | 36 |
| BspCNI | CTCAG | 2 cut(s) | 25, 111 |
| BspLI | GGNNCC | 2 cut(s) | 128, 152 |
| BsrI | ACTGG | 1 cut(s) | 145 |
| BssMI | GATC | 1 cut(s) | 36 |
| BssNI | GRCGYC | 1 cut(s) | 249 |
| Bst2UI | CCWGG | 1 cut(s) | 279 |
| Bst6I | CTCTTC | 1 cut(s) | 279 |
| BstACI | GRCGYC | 1 cut(s) | 249 |
| BstDEI | CTNAG | 2 cut(s) | 33, 98 |
| BstF5I | GGATG | 1 cut(s) | 49 |
| BstKTI | GATC | 1 cut(s) | 39 |
| BstMBI | GATC | 1 cut(s) | 36 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 14 |
| BstNI | CCWGG | 1 cut(s) | 279 |
| BstSCI | CCNGG | 1 cut(s) | 277 |
| BtsCI | GGATG | 1 cut(s) | 49 |
| Csp6I | GTAC | 1 cut(s) | 174 |
| CviJI | RGCY | 5 cut(s) | 22, 144, 151, 241, 277 |
| CviKI_1 | RGCY | 5 cut(s) | 22, 144, 151, 241, 277 |
| CviQI | GTAC | 1 cut(s) | 174 |
| DdeI | CTNAG | 2 cut(s) | 33, 98 |
| DpnI | GATC | 1 cut(s) | 38 |
| DpnII | GATC | 1 cut(s) | 36 |
| Eam1104I | CTCTTC | 1 cut(s) | 279 |
| EarI | CTCTTC | 1 cut(s) | 279 |
| Eco57I | CTGAAG | 1 cut(s) | 257 |
| EcoRII | CCWGG | 1 cut(s) | 277 |
| FaiI | YATR | 5 cut(s) | 168, 179, 189, 195, 225 |
| FokI | GGATG | 1 cut(s) | 56 |
| Hin1I | GRCGYC | 1 cut(s) | 249 |
| HinfI | GANTC | 1 cut(s) | 119 |
| Hpy188I | TCNGA | 3 cut(s) | 34, 101, 266 |
| HpyAV | CCTTC | 1 cut(s) | 191 |
| HpyCH4IV | ACGT | 1 cut(s) | 249 |
| HpyCH4V | TGCA | 2 cut(s) | 74, 255 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 14 |
| HpyF3I | CTNAG | 2 cut(s) | 33, 98 |
| HpySE526I | ACGT | 1 cut(s) | 249 |
| Hsp92I | GRCGYC | 1 cut(s) | 249 |
| Kzo9I | GATC | 1 cut(s) | 36 |
| LmnI | GCTCC | 2 cut(s) | 156, 246 |
| LpnPI | CCDG | 3 cut(s) | 126, 133, 264 |
| LweI | GCATC | 2 cut(s) | 61, 67 |
| MaeII | ACGT | 1 cut(s) | 249 |
| MaeIII | GTNAC | 1 cut(s) | 215 |
| MalI | GATC | 1 cut(s) | 38 |
| MboI | GATC | 1 cut(s) | 36 |
| MboII | GAAGA | 1 cut(s) | 240 |
| MnlI | CCTC | 2 cut(s) | 52, 83 |
| MseI | TTAA | 1 cut(s) | 105 |
| MspR9I | CCNGG | 1 cut(s) | 279 |
| Mva1269I | GAATGC | 1 cut(s) | 10 |
| MvaI | CCWGG | 1 cut(s) | 279 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 14 |
| NdeII | GATC | 1 cut(s) | 36 |
| NlaIV | GGNNCC | 2 cut(s) | 128, 152 |
| PctI | GAATGC | 1 cut(s) | 10 |
| PfeI | GAWTC | 1 cut(s) | 119 |
| Psp6I | CCWGG | 1 cut(s) | 277 |
| PspGI | CCWGG | 1 cut(s) | 277 |
| PspN4I | GGNNCC | 2 cut(s) | 128, 152 |
| RsaI | GTAC | 1 cut(s) | 175 |
| RsaNI | GTAC | 1 cut(s) | 174 |
| SaqAI | TTAA | 1 cut(s) | 105 |
| Sau3AI | GATC | 1 cut(s) | 36 |
| ScrFI | CCNGG | 1 cut(s) | 279 |
| SetI | ASST | 5 cut(s) | 94, 202, 243, 252, 283 |
| SfaNI | GCATC | 2 cut(s) | 61, 67 |
| StyD4I | CCNGG | 1 cut(s) | 277 |
| TaiI | ACGT | 1 cut(s) | 252 |
| TfiI | GAWTC | 1 cut(s) | 119 |
| Tru1I | TTAA | 1 cut(s) | 105 |
| Tru9I | TTAA | 1 cut(s) | 105 |
| TspDTI | ATGAA | 3 cut(s) | 17, 183, 210 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 144 |
| ZraI | GACGTC | 1 cut(s) | 250 |