FvH4_5g06101

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000073
Physical Location & Seq
Forward (+)
3603960 .. 3605626
1667 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g06101.t1

Sequence Viewer

Length: 1071 bp
ATGAACAGTGGAGAGATGAAAAAAATGAGTATTAGAATTACCGGCTGCCCTGGGTTAGACAGGATTATTCAGGTTAAGAAGAATACCTACTCAATTGTGGTGGGATCTGAGAAACTGGCGAATAAATTATTGGATGATATCCCTTGGTATATTAAGGGCTACTGCTTCTCAGTTAGGCACTGGCCGCCTCATCACTCAATCAAAGAGAGCGATACCAGCCGAGCAACTTTTTGGATACAAGCTCGTGGAATCCTTCTTGAGCAAATCACCAAAAACAACGGATGGAAGCTGGGAGGGATGTTAGGTGCTGTTCTTGATGTGGAGAATCCCCAAGTGGTGGGGAACAGAGGTTATCGTAGATTAAGAGTGGATTTTGATACTCGGAGACCATTCACAACTTGCGTACCACTTCCCCGCTCAATATCCAAAACTACTAAGATCATGCTGCAGTACGAGGGGCTGAAGAACTATTGCCATAAGTGTGGGAGACTGGGGCACTCCATTACTGCGTGCAGGTACAAGGTTAATCCTGTTTTGTTACAATTGGGGGTGGTATATGATTCCGCCATCATTGCTGAACCTCCCTCACCTCCAATGAATACTCAGTCAAATTTCCCAGATTTTCCCAATGTTCCTACTTCGGGGACTTTTCGTCGTAATCCGACTTCCATGGCGGCTCCGGTAAATTGTCCCGTTGGGGGAGATTCAATTTCCAATGCAGAAGTTGACTTATGCTTGGCACACAGCTTAAGAGACGGTTTGTCCAGAGAAGGGCCGTTAAGAGAAATGGCAATGTCACCATGGCTTTTGGTGGGCTCGATATTAACCAATGGGCATAGGCTGACCCGGAAGTTATCCCACCATGGGCCTTTAGCGATAGAAATATCTGAGATTGCTCCTATTGTGGTTGTAATTACTGAGTGCCTGGATACAAATGTGATGAAGCCCATTGCTAAAAGGAAGCAGCGCAAAAAAGATGATACTGCTAAGGCACCAAAGAAGCAAAAGGTAGTGCAAAGTCCTGGGCTAAACAACCAGTGGGGCCAGGGGACATGGCAGAGGGAGGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_3 zf-CCHC_4

Protein Analysis

357

Amino Acids

39.67

Weight (kDa)

9.72

Isoelectric Point (pI)

43.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 504
AccB1I GGYRCC 1 cut(s) 991
AccB7I CCANNNNNTGG 1 cut(s) 337
AccBSI CCGCTC 1 cut(s) 417
AciI CCGC 4 cut(s) 185, 415, 564, 674
AclWI GGATC 1 cut(s) 112
AcoI YGGCCR 1 cut(s) 182
AcsI RAATTY 1 cut(s) 610
AcuI CTGAAG 1 cut(s) 482
AfaI GTAC 3 cut(s) 405, 452, 518
AfiI CCNNNNNNNGG 5 cut(s) 337, 641, 698, 771, 864
AflII CTTAAG 1 cut(s) 748
AgsI TTSAA 1 cut(s) 708
AhdI GACNNNNNGTC 2 cut(s) 651, 760
AjnI CCWGG 4 cut(s) 49, 924, 1021, 1044
AjuI GAANNNNNNNTTGG 2 cut(s) 113, 145
AluBI AGCT 3 cut(s) 242, 289, 747
AluI AGCT 3 cut(s) 242, 289, 747
Alw26I GTCTC 3 cut(s) 379, 481, 747
AlwI GGATC 1 cut(s) 112
AoxI GGCC 4 cut(s) 182, 773, 866, 1042
ApeKI GCWGC 3 cut(s) 45, 445, 964
ApoI RAATTY 1 cut(s) 610
AspLEI GCGC 1 cut(s) 969
AspS9I GGNCC 3 cut(s) 773, 866, 1042
AsuC2I CCSGG 1 cut(s) 847
AsuHPI GGTGA 3 cut(s) 259, 579, 789
BaeGI GKGCMC 1 cut(s) 498
BaeI ACNNNNGTAYC 4 cut(s) 387, 420, 921, 954
BanI GGYRCC 1 cut(s) 991
BanII GRGCYC 1 cut(s) 818
BarI GAAGNNNNNNTAC 4 cut(s) 71, 103, 649, 681
BauI CACGAG 1 cut(s) 243
BbvI GCAGC 3 cut(s) 32, 432, 976
BccI CCATC 2 cut(s) 276, 575
BceAI ACGGC 1 cut(s) 760
BciT130I CCWGG 4 cut(s) 51, 926, 1023, 1046
BciVI GTATCC 2 cut(s) 228, 922
BcnI CCSGG 1 cut(s) 847
BcoDI GTCTC 3 cut(s) 379, 481, 747
BfmI CTRYAG 1 cut(s) 446
BfrI CTTAAG 1 cut(s) 748
BfuAI ACCTGC 1 cut(s) 504
BfuI GTATCC 2 cut(s) 228, 922
BisI GCNGC 5 cut(s) 46, 185, 446, 675, 965
BlsI GCNGC 5 cut(s) 47, 186, 447, 676, 966
Bme1390I CCNGG 5 cut(s) 51, 847, 926, 1023, 1046
BmeRI GACNNNNNGTC 2 cut(s) 651, 760
BmgT120I GGNCC 3 cut(s) 773, 866, 1042
BmiI GGNNCC 3 cut(s) 678, 993, 1043
BmrFI CCNGG 5 cut(s) 51, 847, 926, 1023, 1046
BmrI ACTGGG 1 cut(s) 500
BmuI ACTGGG 1 cut(s) 500
Bpu10I CCTNAGC 1 cut(s) 987
BpuEI CTTGAG 1 cut(s) 278
BpuMI CCSGG 1 cut(s) 847
BsaI GGTCTC 1 cut(s) 379
BsaJI CCNNGG 8 cut(s) 49, 50, 143, 669, 800, 862, 1022, 1045
BsaWI WCCGGW 1 cut(s) 679
Bsc4I CCNNNNNNNGG 5 cut(s) 337, 641, 698, 771, 864
Bse118I RCCGGY 1 cut(s) 41
Bse1I ACTGG 4 cut(s) 120, 185, 495, 1036
Bse3DI GCAATG 3 cut(s) 570, 798, 948
BseBI CCWGG 4 cut(s) 51, 926, 1023, 1046
BseDI CCNNGG 8 cut(s) 49, 50, 143, 669, 800, 862, 1022, 1045
BseGI GGATG 3 cut(s) 139, 287, 303
BseLI CCNNNNNNNGG 5 cut(s) 337, 641, 698, 771, 864
BseMI GCAATG 3 cut(s) 570, 798, 948
BseMII CTCAG 5 cut(s) 99, 183, 617, 879, 909
BseNI ACTGG 4 cut(s) 120, 185, 495, 1036
BseSI GKGCMC 1 cut(s) 498
BseXI GCAGC 3 cut(s) 32, 432, 976
BseYI CCCAGC 1 cut(s) 289
BsgI GTGCAG 1 cut(s) 532
BshFI GGCC 4 cut(s) 184, 775, 868, 1044
BshNI GGYRCC 1 cut(s) 991
BsiSI CCGG 3 cut(s) 42, 680, 847
BslFI GGGAC 3 cut(s) 658, 675, 1063
BslI CCNNNNNNNGG 5 cut(s) 337, 641, 698, 771, 864
BsmAI GTCTC 3 cut(s) 379, 481, 747
BsmBI CGTCTC 1 cut(s) 747
BsmFI GGGAC 3 cut(s) 658, 675, 1063
BsnI GGCC 4 cut(s) 184, 775, 868, 1044
Bso31I GGTCTC 1 cut(s) 379
Bsp1286I GDGCHC 2 cut(s) 498, 818
Bsp143I GATC 2 cut(s) 104, 438
Bsp19I CCATGG 3 cut(s) 669, 800, 862
BspACI CCGC 4 cut(s) 185, 415, 564, 674
BspANI GGCC 4 cut(s) 184, 775, 868, 1044
BspCNI CTCAG 5 cut(s) 100, 182, 616, 880, 910
BspLI GGNNCC 3 cut(s) 678, 993, 1043
BspMAI CTGCAG 1 cut(s) 450
BspMI ACCTGC 1 cut(s) 504
BspPI GGATC 1 cut(s) 112
BspT107I GGYRCC 1 cut(s) 991
BspTI CTTAAG 1 cut(s) 748
BspTNI GGTCTC 1 cut(s) 379
BsrBI CCGCTC 1 cut(s) 417
BsrDI GCAATG 3 cut(s) 570, 798, 948
BsrFI RCCGGY 1 cut(s) 41
BsrI ACTGG 4 cut(s) 120, 185, 495, 1036
BssAI RCCGGY 1 cut(s) 41
BssECI CCNNGG 8 cut(s) 49, 50, 143, 669, 800, 862, 1022, 1045
BssMI GATC 2 cut(s) 104, 438
BssSI CACGAG 1 cut(s) 243
BssT1I CCWWGG 4 cut(s) 143, 669, 800, 862
Bst2BI CACGAG 1 cut(s) 243
Bst2UI CCWGG 4 cut(s) 51, 926, 1023, 1046
Bst4CI ACNGT 2 cut(s) 8, 758
BstAFI CTTAAG 1 cut(s) 748
BstC8I GCNNGC 1 cut(s) 511
BstDEI CTNAG 7 cut(s) 108, 169, 435, 603, 888, 918, 987
BstDSI CCRYGG 3 cut(s) 669, 800, 862
BstF5I GGATG 3 cut(s) 139, 287, 303
BstHHI GCGC 1 cut(s) 969
BstKTI GATC 2 cut(s) 107, 441
BstMAI GTCTC 3 cut(s) 379, 481, 747
BstMBI GATC 2 cut(s) 104, 438
BstMWI GCNNNNNNNGC 3 cut(s) 184, 216, 572
BstNI CCWGG 4 cut(s) 51, 926, 1023, 1046
BstSCI CCNGG 5 cut(s) 49, 845, 924, 1021, 1044
BstSFI CTRYAG 1 cut(s) 446
BstSLI GKGCMC 1 cut(s) 498
BstV1I GCAGC 3 cut(s) 32, 432, 976
BstX2I RGATCY 1 cut(s) 104
BstXI CCANNNNNNTGG 1 cut(s) 482
BstYI RGATCY 1 cut(s) 104
BsuI GTATCC 2 cut(s) 228, 922
BsuRI GGCC 4 cut(s) 184, 775, 868, 1044
BtgI CCRYGG 3 cut(s) 669, 800, 862
BtsCI GGATG 3 cut(s) 139, 287, 303
BtsIMutI CAGTG 3 cut(s) 13, 178, 1043
BveI ACCTGC 1 cut(s) 504
Cac8I GCNNGC 1 cut(s) 511
CfoI GCGC 1 cut(s) 969
Cfr10I RCCGGY 1 cut(s) 41
Cfr13I GGNCC 3 cut(s) 773, 866, 1042
Csp6I GTAC 3 cut(s) 404, 451, 517
CspCI CAANNNNNGTGG 2 cut(s) 81, 116
CviAII CATG 5 cut(s) 442, 670, 801, 863, 1053
CviQI GTAC 3 cut(s) 404, 451, 517
DdeI CTNAG 7 cut(s) 108, 169, 435, 603, 888, 918, 987
DpnI GATC 2 cut(s) 106, 440
DpnII GATC 2 cut(s) 104, 438
DriI GACNNNNNGTC 2 cut(s) 651, 760
EaeI YGGCCR 1 cut(s) 182
Eam1105I GACNNNNNGTC 2 cut(s) 651, 760
EciI GGCGGA 1 cut(s) 553
Eco130I CCWWGG 4 cut(s) 143, 669, 800, 862
Eco24I GRGCYC 1 cut(s) 818
Eco31I GGTCTC 1 cut(s) 379
Eco32I GATATC 1 cut(s) 139
Eco57I CTGAAG 1 cut(s) 482
EcoRII CCWGG 4 cut(s) 49, 924, 1021, 1044
EcoRV GATATC 1 cut(s) 139
EcoT14I CCWWGG 4 cut(s) 143, 669, 800, 862
EcoT38I GRGCYC 1 cut(s) 818
ErhI CCWWGG 4 cut(s) 143, 669, 800, 862
Esp3I CGTCTC 1 cut(s) 747
FaeI CATG 5 cut(s) 445, 673, 804, 866, 1056
FaqI GGGAC 3 cut(s) 658, 675, 1063
FatI CATG 5 cut(s) 441, 669, 800, 862, 1052
FauI CCCGC 1 cut(s) 422
Fnu4HI GCNGC 5 cut(s) 46, 185, 446, 675, 965
FokI GGATG 3 cut(s) 146, 294, 310
FriOI GRGCYC 1 cut(s) 818
Fsp4HI GCNGC 5 cut(s) 46, 185, 446, 675, 965
GlaI GCGC 1 cut(s) 968
GluI GCNGC 5 cut(s) 46, 185, 446, 675, 965
GsaI CCCAGC 1 cut(s) 293
HaeIII GGCC 4 cut(s) 184, 775, 868, 1044
HapII CCGG 3 cut(s) 42, 680, 847
HhaI GCGC 1 cut(s) 969
Hin1II CATG 5 cut(s) 445, 673, 804, 866, 1056
Hin6I GCGC 1 cut(s) 967
HinP1I GCGC 1 cut(s) 967
HincII GTYRAC 1 cut(s) 727
HindII GTYRAC 1 cut(s) 727
HinfI GANTC 4 cut(s) 249, 325, 560, 704
HpaII CCGG 3 cut(s) 42, 680, 847
HphI GGTGA 3 cut(s) 259, 579, 789
Hpy166II GTNNAC 1 cut(s) 727
Hpy188I TCNGA 4 cut(s) 109, 384, 663, 889
Hpy188III TCNNGA 3 cut(s) 257, 314, 765
Hpy8I GTNNAC 1 cut(s) 727
Hpy99I CGWCG 1 cut(s) 657
HpyAV CCTTC 2 cut(s) 263, 764
HpyCH4III ACNGT 2 cut(s) 8, 758
HpyCH4V TGCA 4 cut(s) 448, 513, 719, 1015
HpyF10VI GCNNNNNNNGC 3 cut(s) 184, 216, 572
HpyF3I CTNAG 7 cut(s) 108, 169, 435, 603, 888, 918, 987
Hsp92II CATG 5 cut(s) 445, 673, 804, 866, 1056
HspAI GCGC 1 cut(s) 967
Kzo9I GATC 2 cut(s) 104, 438
LmnI GCTCC 2 cut(s) 682, 901
Lsp1109I GCAGC 3 cut(s) 32, 432, 976
MaeIII GTNAC 2 cut(s) 537, 795
MalI GATC 2 cut(s) 106, 440
MbiI CCGCTC 1 cut(s) 417
MboI GATC 2 cut(s) 104, 438
MboII GAAGA 2 cut(s) 91, 475
MfeI CAATTG 2 cut(s) 93, 542
MflI RGATCY 1 cut(s) 104
MhlI GDGCHC 2 cut(s) 498, 818
MluCI AATT 8 cut(s) 36, 93, 125, 542, 610, 685, 708, 912
MmeI TCCRAC 1 cut(s) 686
MnlI CCTC 9 cut(s) 198, 287, 341, 448, 591, 595, 600, 1053, 1057
MseI TTAA 7 cut(s) 75, 153, 362, 525, 749, 779, 824
MslI CAYNNNNRTG 1 cut(s) 480
MspCI CTTAAG 1 cut(s) 748
MspI CCGG 3 cut(s) 42, 680, 847
MspR9I CCNGG 5 cut(s) 51, 847, 926, 1023, 1046
MunI CAATTG 2 cut(s) 93, 542
MvaI CCWGG 4 cut(s) 51, 926, 1023, 1046
MwoI GCNNNNNNNGC 3 cut(s) 184, 216, 572
NciI CCSGG 1 cut(s) 847
NcoI CCATGG 3 cut(s) 669, 800, 862
NdeII GATC 2 cut(s) 104, 438
NlaIII CATG 5 cut(s) 445, 673, 804, 866, 1056
NlaIV GGNNCC 3 cut(s) 678, 993, 1043
NmeAIII GCCGAG 1 cut(s) 245
NmuCI GTSAC 1 cut(s) 795
PasI CCCWGGG 1 cut(s) 50
PfeI GAWTC 4 cut(s) 249, 325, 560, 704
PflMI CCANNNNNTGG 1 cut(s) 337
PkrI GCNGC 5 cut(s) 47, 186, 447, 676, 966
Psp6I CCWGG 4 cut(s) 49, 924, 1021, 1044
PspFI CCCAGC 1 cut(s) 289
PspGI CCWGG 4 cut(s) 49, 924, 1021, 1044
PspN4I GGNNCC 3 cut(s) 678, 993, 1043
PspPI GGNCC 3 cut(s) 773, 866, 1042
PstI CTGCAG 1 cut(s) 450
PsuI RGATCY 1 cut(s) 104
RsaI GTAC 3 cut(s) 405, 452, 518
RsaNI GTAC 3 cut(s) 404, 451, 517
RseI CAYNNNNRTG 1 cut(s) 480
SaqAI TTAA 7 cut(s) 75, 153, 362, 525, 749, 779, 824
SatI GCNGC 5 cut(s) 46, 185, 446, 675, 965
Sau3AI GATC 2 cut(s) 104, 438
Sau96I GGNCC 3 cut(s) 773, 866, 1042
ScrFI CCNGG 5 cut(s) 51, 847, 926, 1023, 1046
SduI GDGCHC 2 cut(s) 498, 818
SfcI CTRYAG 1 cut(s) 446
SmiMI CAYNNNNRTG 1 cut(s) 480
SmlI CTYRAG 2 cut(s) 257, 748
SmoI CTYRAG 2 cut(s) 257, 748
Sse9I AATT 8 cut(s) 36, 93, 125, 542, 610, 685, 708, 912
SsiI CCGC 4 cut(s) 185, 415, 564, 674
StyD4I CCNGG 5 cut(s) 49, 845, 924, 1021, 1044
StyI CCWWGG 4 cut(s) 143, 669, 800, 862
TaaI ACNGT 2 cut(s) 8, 758
TaqI TCGA 1 cut(s) 818
TasI AATT 8 cut(s) 36, 93, 125, 542, 610, 685, 708, 912
TauI GCSGC 2 cut(s) 187, 677
TfiI GAWTC 4 cut(s) 249, 325, 560, 704
Tru1I TTAA 7 cut(s) 75, 153, 362, 525, 749, 779, 824
Tru9I TTAA 7 cut(s) 75, 153, 362, 525, 749, 779, 824
TscAI CASTG 3 cut(s) 13, 185, 1043
TseFI GTSAC 1 cut(s) 795
TseI GCWGC 3 cut(s) 45, 445, 964
Tsp45I GTSAC 1 cut(s) 795
TspDTI ATGAA 4 cut(s) 17, 32, 611, 956
TspGWI ACGGA 1 cut(s) 294
TspRI CASTG 3 cut(s) 13, 185, 1043
Van91I CCANNNNNTGG 1 cut(s) 337
Vha464I CTTAAG 1 cut(s) 748
XapI RAATTY 1 cut(s) 610
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.