Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 236, 248, 331 |
| AclWI | GGATC | 3 cut(s) | 154, 230, 324 |
| AcsI | RAATTY | 1 cut(s) | 338 |
| AcuI | CTGAAG | 1 cut(s) | 219 |
| AfaI | GTAC | 1 cut(s) | 176 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 70 |
| AgsI | TTSAA | 3 cut(s) | 16, 104, 233 |
| AjnI | CCWGG | 1 cut(s) | 137 |
| AluBI | AGCT | 2 cut(s) | 183, 280 |
| AluI | AGCT | 2 cut(s) | 183, 280 |
| Alw26I | GTCTC | 1 cut(s) | 34 |
| AlwI | GGATC | 3 cut(s) | 154, 230, 324 |
| ApoI | RAATTY | 1 cut(s) | 338 |
| AspS9I | GGNCC | 3 cut(s) | 51, 61, 327 |
| AsuHPI | GGTGA | 1 cut(s) | 335 |
| AvaII | GGWCC | 3 cut(s) | 51, 61, 327 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 167, 199 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 12, 46 |
| BciT130I | CCWGG | 1 cut(s) | 139 |
| BciVI | GTATCC | 1 cut(s) | 254 |
| BcoDI | GTCTC | 1 cut(s) | 34 |
| BfaI | CTAG | 1 cut(s) | 117 |
| BfuI | GTATCC | 1 cut(s) | 254 |
| Bme1390I | CCNGG | 1 cut(s) | 139 |
| Bme18I | GGWCC | 3 cut(s) | 51, 61, 327 |
| BmgT120I | GGNCC | 3 cut(s) | 51, 61, 327 |
| BmiI | GGNNCC | 2 cut(s) | 52, 329 |
| BmrFI | CCNGG | 1 cut(s) | 139 |
| BsaBI | GATNNNNATC | 1 cut(s) | 81 |
| BsaJI | CCNNGG | 4 cut(s) | 54, 68, 137, 138 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 70 |
| Bse8I | GATNNNNATC | 1 cut(s) | 81 |
| BseBI | CCWGG | 1 cut(s) | 139 |
| BseDI | CCNNGG | 4 cut(s) | 54, 68, 137, 138 |
| BseJI | GATNNNNATC | 1 cut(s) | 81 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 70 |
| BseMII | CTCAG | 1 cut(s) | 255 |
| BseYI | CCCAGC | 1 cut(s) | 250 |
| BsgI | GTGCAG | 1 cut(s) | 42 |
| BslFI | GGGAC | 2 cut(s) | 64, 304 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 70 |
| BsmAI | GTCTC | 1 cut(s) | 34 |
| BsmFI | GGGAC | 2 cut(s) | 64, 304 |
| Bsp143I | GATC | 4 cut(s) | 76, 159, 222, 316 |
| Bsp19I | CCATGG | 1 cut(s) | 54 |
| BspACI | CCGC | 3 cut(s) | 236, 248, 331 |
| BspCNI | CTCAG | 1 cut(s) | 256 |
| BspHI | TCATGA | 1 cut(s) | 319 |
| BspLI | GGNNCC | 2 cut(s) | 52, 329 |
| BspPI | GGATC | 3 cut(s) | 154, 230, 324 |
| BssECI | CCNNGG | 4 cut(s) | 54, 68, 137, 138 |
| BssMI | GATC | 4 cut(s) | 76, 159, 222, 316 |
| BssT1I | CCWWGG | 1 cut(s) | 54 |
| Bst2UI | CCWGG | 1 cut(s) | 139 |
| BstC8I | GCNNGC | 1 cut(s) | 153 |
| BstDEI | CTNAG | 1 cut(s) | 264 |
| BstDSI | CCRYGG | 2 cut(s) | 54, 68 |
| BstKTI | GATC | 4 cut(s) | 79, 162, 225, 319 |
| BstMAI | GTCTC | 1 cut(s) | 34 |
| BstMBI | GATC | 4 cut(s) | 76, 159, 222, 316 |
| BstNI | CCWGG | 1 cut(s) | 139 |
| BstSCI | CCNGG | 1 cut(s) | 137 |
| BstX2I | RGATCY | 1 cut(s) | 222 |
| BstYI | RGATCY | 1 cut(s) | 222 |
| BsuI | GTATCC | 1 cut(s) | 254 |
| BtgI | CCRYGG | 2 cut(s) | 54, 68 |
| BtsI | GCAGTG | 1 cut(s) | 30 |
| BtsIMutI | CAGTG | 1 cut(s) | 30 |
| Cac8I | GCNNGC | 1 cut(s) | 153 |
| CciI | TCATGA | 1 cut(s) | 319 |
| Cfr13I | GGNCC | 3 cut(s) | 51, 61, 327 |
| Csp6I | GTAC | 1 cut(s) | 175 |
| CviAII | CATG | 2 cut(s) | 55, 320 |
| CviJI | RGCY | 5 cut(s) | 74, 135, 183, 268, 280 |
| CviKI_1 | RGCY | 5 cut(s) | 74, 135, 183, 268, 280 |
| CviQI | GTAC | 1 cut(s) | 175 |
| DdeI | CTNAG | 1 cut(s) | 264 |
| DpnI | GATC | 4 cut(s) | 78, 161, 224, 318 |
| DpnII | GATC | 4 cut(s) | 76, 159, 222, 316 |
| Eco130I | CCWWGG | 1 cut(s) | 54 |
| Eco47I | GGWCC | 3 cut(s) | 51, 61, 327 |
| Eco57I | CTGAAG | 1 cut(s) | 219 |
| EcoO109I | RGGNCCY | 1 cut(s) | 327 |
| EcoRII | CCWGG | 1 cut(s) | 137 |
| EcoT14I | CCWWGG | 1 cut(s) | 54 |
| ErhI | CCWWGG | 1 cut(s) | 54 |
| FaeI | CATG | 2 cut(s) | 58, 323 |
| FaiI | YATR | 4 cut(s) | 56, 158, 257, 321 |
| FaqI | GGGAC | 2 cut(s) | 64, 304 |
| FatI | CATG | 2 cut(s) | 54, 319 |
| FauI | CCCGC | 2 cut(s) | 255, 338 |
| FspBI | CTAG | 1 cut(s) | 117 |
| GsaI | CCCAGC | 1 cut(s) | 254 |
| Hin1II | CATG | 2 cut(s) | 58, 323 |
| HincII | GTYRAC | 1 cut(s) | 90 |
| HindII | GTYRAC | 1 cut(s) | 90 |
| HinfI | GANTC | 1 cut(s) | 144 |
| HpaI | GTTAAC | 1 cut(s) | 90 |
| HphI | GGTGA | 1 cut(s) | 335 |
| Hpy166II | GTNNAC | 1 cut(s) | 90 |
| Hpy188I | TCNGA | 2 cut(s) | 168, 199 |
| Hpy188III | TCNNGA | 4 cut(s) | 16, 187, 226, 320 |
| Hpy8I | GTNNAC | 1 cut(s) | 90 |
| HpyAV | CCTTC | 2 cut(s) | 121, 173 |
| HpyCH4IV | ACGT | 1 cut(s) | 106 |
| HpyCH4V | TGCA | 1 cut(s) | 23 |
| HpyF3I | CTNAG | 1 cut(s) | 264 |
| HpySE526I | ACGT | 1 cut(s) | 106 |
| Hsp92II | CATG | 2 cut(s) | 58, 323 |
| KspAI | GTTAAC | 1 cut(s) | 90 |
| Kzo9I | GATC | 4 cut(s) | 76, 159, 222, 316 |
| LpnPI | CCDG | 8 cut(s) | 33, 124, 151, 161, 211, 236, 266, 310 |
| MaeI | CTAG | 1 cut(s) | 117 |
| MaeII | ACGT | 1 cut(s) | 106 |
| MalI | GATC | 4 cut(s) | 78, 161, 224, 318 |
| MboI | GATC | 4 cut(s) | 76, 159, 222, 316 |
| MfeI | CAATTG | 1 cut(s) | 294 |
| MflI | RGATCY | 1 cut(s) | 222 |
| MluCI | AATT | 2 cut(s) | 294, 338 |
| MmeI | TCCRAC | 2 cut(s) | 88, 189 |
| MnlI | CCTC | 4 cut(s) | 21, 52, 295, 304 |
| MseI | TTAA | 3 cut(s) | 89, 123, 276 |
| MspA1I | CMGCKG | 1 cut(s) | 250 |
| MspR9I | CCNGG | 1 cut(s) | 139 |
| MunI | CAATTG | 1 cut(s) | 294 |
| MvaI | CCWGG | 1 cut(s) | 139 |
| NcoI | CCATGG | 1 cut(s) | 54 |
| NdeII | GATC | 4 cut(s) | 76, 159, 222, 316 |
| NlaIII | CATG | 2 cut(s) | 58, 323 |
| NlaIV | GGNNCC | 2 cut(s) | 52, 329 |
| PagI | TCATGA | 1 cut(s) | 319 |
| PasI | CCCWGGG | 1 cut(s) | 138 |
| PfeI | GAWTC | 1 cut(s) | 144 |
| PpuMI | RGGWCCY | 1 cut(s) | 327 |
| Psp5II | RGGWCCY | 1 cut(s) | 327 |
| Psp6I | CCWGG | 1 cut(s) | 137 |
| PspFI | CCCAGC | 1 cut(s) | 250 |
| PspGI | CCWGG | 1 cut(s) | 137 |
| PspN4I | GGNNCC | 2 cut(s) | 52, 329 |
| PspPI | GGNCC | 3 cut(s) | 51, 61, 327 |
| PspPPI | RGGWCCY | 1 cut(s) | 327 |
| PsuI | RGATCY | 1 cut(s) | 222 |
| RsaI | GTAC | 1 cut(s) | 176 |
| RsaNI | GTAC | 1 cut(s) | 175 |
| SaqAI | TTAA | 3 cut(s) | 89, 123, 276 |
| Sau3AI | GATC | 4 cut(s) | 76, 159, 222, 316 |
| Sau96I | GGNCC | 3 cut(s) | 51, 61, 327 |
| ScrFI | CCNGG | 1 cut(s) | 139 |
| SetI | ASST | 8 cut(s) | 32, 63, 109, 185, 244, 282, 306, 315 |
| SinI | GGWCC | 3 cut(s) | 51, 61, 327 |
| Sse9I | AATT | 2 cut(s) | 294, 338 |
| SsiI | CCGC | 3 cut(s) | 236, 248, 331 |
| SspMI | CTAG | 1 cut(s) | 117 |
| StyD4I | CCNGG | 1 cut(s) | 137 |
| StyI | CCWWGG | 1 cut(s) | 54 |
| TaiI | ACGT | 1 cut(s) | 109 |
| TaqI | TCGA | 2 cut(s) | 32, 188 |
| TasI | AATT | 2 cut(s) | 294, 338 |
| TfiI | GAWTC | 1 cut(s) | 144 |
| Tru1I | TTAA | 3 cut(s) | 89, 123, 276 |
| Tru9I | TTAA | 3 cut(s) | 89, 123, 276 |
| TscAI | CASTG | 1 cut(s) | 30 |
| TspRI | CASTG | 1 cut(s) | 30 |
| VpaK11BI | GGWCC | 3 cut(s) | 51, 61, 327 |
| XapI | RAATTY | 1 cut(s) | 338 |
| XspI | CTAG | 1 cut(s) | 117 |