Rw6G001680

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000073
Physical Location & Seq
Reverse (-)
2635872 .. 2637937
2066 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G001680.1

Sequence Viewer

Length: 1326 bp
ATGAACCCCAGCAACACTGAAAACCCCAACCCAGATGACCATGTTCTAAATTTAGATCTCAACCAACATGCTCTTGATGATGAGCAACCTCTCACTCTCCTGGGATTTGTCATTGCCGACAAATTCCTCAATGTTGCTGCGGTGATCCGAATCCTGGTCCGTGCTTGGGCAGATTTTGGAGAAGTCCATATTGAACCTATTCGTGATAATCGGACTTTTGCTATTACTCTGATGGACAGAGAAGGTGGCCAGCGAATTCTCGATAAGGGCCCGTGGTCGGTGATGGGATATGCGGTCTGTGTCCATCTTTGGCCTCTGGAAGCTCGGCTGGAAGATGTTCAGGTCCATCTCCTCCCAATCTGGATCCAGGCTCATGGCTTGCCTCTTGGCCAAATGACCAGATCCAATGCACATCTTATTGGAGCTACTGCTGGATCTGTAATTGAGGTTGAAGACCCAAATGCAATTAATGGCTGGAGAGGGTTCCTCAGGCTTCGAATCAGCATCAATACCCGTAATCCCCTCACCCCCGGAGTCTGGATCCGGAATGGAAATCGCCCTCCTGTGTGGGTGGAATTCAGTTCTGTTGATCAAACTACTTTGGGTCTGACTGATCACTCTTCTGTTCCCCTTTTTCACTACCCTTCTCAATCCCAGCTTCCTCAGGCCTATCAAACGAATATATCCAGGCCTGCCCCCAGCCACTTCTCTACAAAATCAGATATCTCTTACAACCAATCCGTCCACACAAATAATCTCCCAAATACCCCCACTGAACTAGTCTCTTACCGGTCCCCTTCAACTATGACAACCCCACTGATTCCCATTTCGCCCCCCACTTCAAGTCATGAAGGTGTTGTCACTGGTATTGCCTCTTTCCTGGATCGGCTTCGTCTCAAGCGTCAGACTGATGATTCATTTCCACTCTCTGATCGGCTGACTAAAAAGACAAAATCAAGCTCTATCCCCACTATACTAGATGGAATCCCTATTTCTCCTTACTCCCCAACTGATGATCTCCCTGATCCAGAATTGGATATGCCCCTGAATCTGCTGGCTGCTTCCTCTTCAGGCGGAGTGAGGGGCCGGGGCCGATCTGGTCGCAATAGGAGCCGAGGAGGTCGGGGAAGAGGGAGAAAACGAGGTACTTTGGTTGCCTCTGTTATGGCACCTCACCAATCTGAATCCATACTCAGGGAGACTCTCTCGACTCCTGAAGGGCTTCTTGCCGTACAAATCATCTTGGCTGAGACTTACCAGGCAACTATCCCACCTTTGGACCTGAGATCCTTCTGCTCCTTCTACCTCGGGGACTACAATCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4 zf-RING_2

Protein Analysis

441

Amino Acids

48.65

Weight (kDa)

6.5

Isoelectric Point (pI)

47.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 31 - 107 3.7e-07 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1168
AccIII TCCGGA 1 cut(s) 543
AciI CCGC 3 cut(s) 140, 293, 1074
AcoI YGGCCR 2 cut(s) 247, 388
AcsI RAATTY 4 cut(s) 49, 122, 255, 575
AcuI CTGAAG 2 cut(s) 1053, 1236
AfaI GTAC 2 cut(s) 1147, 1233
AfiI CCNNNNNNNGG 6 cut(s) 154, 166, 277, 537, 1194, 1276
AgeI ACCGGT 1 cut(s) 789
AgsI TTSAA 4 cut(s) 194, 452, 801, 843
AhlI ACTAGT 1 cut(s) 778
AjnI CCWGG 6 cut(s) 99, 153, 366, 686, 879, 1257
AluBI AGCT 4 cut(s) 323, 425, 658, 960
AluI AGCT 4 cut(s) 323, 425, 658, 960
Alw26I GTCTC 4 cut(s) 787, 899, 1193, 1244
Ama87I CYCGRG 1 cut(s) 1307
Aor13HI TCCGGA 1 cut(s) 543
AoxI GGCC 8 cut(s) 247, 268, 311, 388, 666, 689, 1084, 1090
ApaI GGGCCC 1 cut(s) 272
ApeKI GCWGC 2 cut(s) 137, 1058
ApoI RAATTY 4 cut(s) 49, 122, 255, 575
AseI ATTAAT 1 cut(s) 468
AsiGI ACCGGT 1 cut(s) 789
Asp700I GAANNNNTTC 3 cut(s) 198, 336, 1221
AspS9I GGNCC 8 cut(s) 157, 268, 269, 343, 792, 1084, 1090, 1279
AsuC2I CCSGG 2 cut(s) 531, 1088
AsuHPI GGTGA 4 cut(s) 154, 292, 517, 1166
AsuII TTCGAA 1 cut(s) 496
AvaI CYCGRG 1 cut(s) 1307
AvaII GGWCC 4 cut(s) 157, 343, 792, 1279
AxyI CCTNAGG 2 cut(s) 488, 663
BaeGI GKGCMC 1 cut(s) 272
BaeI ACNNNNGTAYC 2 cut(s) 1137, 1170
BalI TGGCCA 2 cut(s) 249, 390
BamHI GGATCC 2 cut(s) 363, 540
BanI GGYRCC 1 cut(s) 1168
BanII GRGCYC 1 cut(s) 272
BbsI GAAGAC 1 cut(s) 459
BbvI GCAGC 2 cut(s) 124, 1045
BccI CCATC 5 cut(s) 226, 277, 312, 354, 974
BceAI ACGGC 1 cut(s) 1214
BciT130I CCWGG 6 cut(s) 101, 155, 368, 688, 881, 1259
BclI TGATCA 2 cut(s) 589, 613
BcnI CCSGG 2 cut(s) 531, 1088
BcoDI GTCTC 4 cut(s) 787, 899, 1193, 1244
BcuI ACTAGT 1 cut(s) 778
BfaI CTAG 2 cut(s) 779, 977
BglII AGATCT 1 cut(s) 55
BisI GCNGC 2 cut(s) 138, 1059
BlsI GCNGC 2 cut(s) 139, 1060
Bme1390I CCNGG 8 cut(s) 101, 155, 368, 531, 688, 881, 1088, 1259
Bme18I GGWCC 4 cut(s) 157, 343, 792, 1279
BmeT110I CYCGRG 1 cut(s) 1307
BmgT120I GGNCC 8 cut(s) 157, 268, 269, 343, 792, 1084, 1090, 1279
BmiI GGNNCC 9 cut(s) 270, 365, 485, 542, 794, 1085, 1091, 1112, 1170
BmrFI CCNGG 8 cut(s) 101, 155, 368, 531, 688, 881, 1088, 1259
BmsI GCATC 1 cut(s) 513
BpiI GAAGAC 1 cut(s) 459
BplI GAGNNNNNCTC 4 cut(s) 471, 503, 1190, 1222
BpmI CTGGAG 1 cut(s) 496
Bpu14I TTCGAA 1 cut(s) 496
BpuEI CTTGAG 1 cut(s) 881
BpuMI CCSGG 2 cut(s) 531, 1088
BsaBI GATNNNNATC 1 cut(s) 149
BsaJI CCNNGG 6 cut(s) 100, 272, 529, 1087, 1114, 1306
BsaWI WCCGGW 2 cut(s) 543, 789
Bsc4I CCNNNNNNNGG 6 cut(s) 154, 166, 277, 537, 1194, 1276
Bse118I RCCGGY 1 cut(s) 789
Bse1I ACTGG 1 cut(s) 868
Bse21I CCTNAGG 2 cut(s) 488, 663
Bse3DI GCAATG 1 cut(s) 111
Bse8I GATNNNNATC 1 cut(s) 149
BseAI TCCGGA 1 cut(s) 543
BseBI CCWGG 6 cut(s) 101, 155, 368, 688, 881, 1259
BseDI CCNNGG 6 cut(s) 100, 272, 529, 1087, 1114, 1306
BseJI GATNNNNATC 1 cut(s) 149
BseLI CCNNNNNNNGG 6 cut(s) 154, 166, 277, 537, 1194, 1276
BseMI GCAATG 1 cut(s) 111
BseMII CTCAG 5 cut(s) 502, 677, 1207, 1239, 1274
BseNI ACTGG 1 cut(s) 868
BseRI GAGGAG 2 cut(s) 341, 1131
BseSI GKGCMC 1 cut(s) 272
BseXI GCAGC 2 cut(s) 124, 1045
BseYI CCCAGC 3 cut(s) 8, 654, 698
BshFI GGCC 8 cut(s) 249, 270, 313, 390, 668, 691, 1086, 1092
BshNI GGYRCC 1 cut(s) 1168
BshTI ACCGGT 1 cut(s) 789
BsiHKCI CYCGRG 1 cut(s) 1307
BsiSI CCGG 4 cut(s) 531, 544, 790, 1087
BslFI GGGAC 1 cut(s) 778
BslI CCNNNNNNNGG 6 cut(s) 154, 166, 277, 537, 1194, 1276
BsmAI GTCTC 4 cut(s) 787, 899, 1193, 1244
BsmBI CGTCTC 1 cut(s) 899
BsmFI GGGAC 1 cut(s) 778
BsnI GGCC 8 cut(s) 249, 270, 313, 390, 668, 691, 1086, 1092
BsoBI CYCGRG 1 cut(s) 1307
Bsp119I TTCGAA 1 cut(s) 496
Bsp120I GGGCCC 1 cut(s) 268
Bsp1286I GDGCHC 1 cut(s) 272
Bsp13I TCCGGA 1 cut(s) 543
BspACI CCGC 3 cut(s) 140, 293, 1074
BspANI GGCC 8 cut(s) 249, 270, 313, 390, 668, 691, 1086, 1092
BspCNI CTCAG 5 cut(s) 501, 676, 1206, 1240, 1275
BspEI TCCGGA 1 cut(s) 543
BspHI TCATGA 1 cut(s) 847
BspLI GGNNCC 9 cut(s) 270, 365, 485, 542, 794, 1085, 1091, 1112, 1170
BspT104I TTCGAA 1 cut(s) 496
BspT107I GGYRCC 1 cut(s) 1168
BsrDI GCAATG 1 cut(s) 111
BsrFI RCCGGY 1 cut(s) 789
BsrI ACTGG 1 cut(s) 868
BssAI RCCGGY 1 cut(s) 789
BssECI CCNNGG 6 cut(s) 100, 272, 529, 1087, 1114, 1306
Bst2UI CCWGG 6 cut(s) 101, 155, 368, 688, 881, 1259
Bst6I CTCTTC 3 cut(s) 625, 1072, 1123
BstBI TTCGAA 1 cut(s) 496
BstC8I GCNNGC 4 cut(s) 251, 380, 693, 1056
BstDEI CTNAG 5 cut(s) 488, 663, 1193, 1248, 1283
BstDSI CCRYGG 1 cut(s) 272
BstMAI GTCTC 4 cut(s) 787, 899, 1193, 1244
BstMWI GCNNNNNNNGC 1 cut(s) 1110
BstNI CCWGG 6 cut(s) 101, 155, 368, 688, 881, 1259
BstNSI RCATGY 1 cut(s) 71
BstSCI CCNGG 8 cut(s) 99, 153, 366, 529, 686, 879, 1086, 1257
BstSLI GKGCMC 1 cut(s) 272
BstV1I GCAGC 2 cut(s) 124, 1045
BstV2I GAAGAC 1 cut(s) 459
BstX2I RGATCY 6 cut(s) 55, 363, 401, 434, 540, 1286
BstXI CCANNNNNNTGG 1 cut(s) 374
BstYI RGATCY 6 cut(s) 55, 363, 401, 434, 540, 1286
Bsu36I CCTNAGG 2 cut(s) 488, 663
BsuRI GGCC 8 cut(s) 249, 270, 313, 390, 668, 691, 1086, 1092
BtgI CCRYGG 1 cut(s) 272
BtsIMutI CAGTG 4 cut(s) 15, 771, 815, 861
Cac8I GCNNGC 4 cut(s) 251, 380, 693, 1056
CciI TCATGA 1 cut(s) 847
Cfr10I RCCGGY 1 cut(s) 789
Cfr13I GGNCC 8 cut(s) 157, 268, 269, 343, 792, 1084, 1090, 1279
CseI GACGC 1 cut(s) 890
Csp6I GTAC 2 cut(s) 1146, 1232
CspAI ACCGGT 1 cut(s) 789
CviAII CATG 4 cut(s) 41, 68, 374, 848
CviQI GTAC 2 cut(s) 1146, 1232
DdeI CTNAG 5 cut(s) 488, 663, 1193, 1248, 1283
EaeI YGGCCR 2 cut(s) 247, 388
Eam1104I CTCTTC 3 cut(s) 625, 1072, 1123
EarI CTCTTC 3 cut(s) 625, 1072, 1123
EciI GGCGGA 1 cut(s) 1089
Eco147I AGGCCT 2 cut(s) 668, 691
Eco24I GRGCYC 1 cut(s) 272
Eco32I GATATC 1 cut(s) 724
Eco47I GGWCC 4 cut(s) 157, 343, 792, 1279
Eco57I CTGAAG 2 cut(s) 1053, 1236
Eco81I CCTNAGG 2 cut(s) 488, 663
Eco88I CYCGRG 1 cut(s) 1307
EcoO109I RGGNCCY 1 cut(s) 268
EcoRI GAATTC 2 cut(s) 255, 575
EcoRII CCWGG 6 cut(s) 99, 153, 366, 686, 879, 1257
EcoRV GATATC 1 cut(s) 724
EcoT38I GRGCYC 1 cut(s) 272
Esp3I CGTCTC 1 cut(s) 899
FaeI CATG 4 cut(s) 44, 71, 377, 851
FalI AAGNNNNNCTT 2 cut(s) 1209, 1241
FaqI GGGAC 1 cut(s) 778
FatI CATG 4 cut(s) 40, 67, 373, 847
FbaI TGATCA 2 cut(s) 589, 613
Fnu4HI GCNGC 2 cut(s) 138, 1059
FriOI GRGCYC 1 cut(s) 272
Fsp4HI GCNGC 2 cut(s) 138, 1059
FspBI CTAG 2 cut(s) 779, 977
GluI GCNGC 2 cut(s) 138, 1059
GsaI CCCAGC 3 cut(s) 12, 658, 702
GsuI CTGGAG 1 cut(s) 496
HaeIII GGCC 8 cut(s) 249, 270, 313, 390, 668, 691, 1086, 1092
HapII CCGG 4 cut(s) 531, 544, 790, 1087
HgaI GACGC 1 cut(s) 890
Hin1II CATG 4 cut(s) 44, 71, 377, 851
HpaII CCGG 4 cut(s) 531, 544, 790, 1087
HphI GGTGA 4 cut(s) 154, 292, 517, 1166
Hpy166II GTNNAC 1 cut(s) 745
Hpy188I TCNGA 8 cut(s) 149, 213, 231, 609, 721, 906, 931, 1183
Hpy8I GTNNAC 1 cut(s) 745
HpyAV CCTTC 7 cut(s) 236, 654, 807, 845, 1211, 1300, 1309
HpyCH4V TGCA 2 cut(s) 410, 464
HpyF10VI GCNNNNNNNGC 1 cut(s) 1110
HpyF3I CTNAG 5 cut(s) 488, 663, 1193, 1248, 1283
Hsp92II CATG 4 cut(s) 44, 71, 377, 851
Kpn2I TCCGGA 1 cut(s) 543
Ksp22I TGATCA 2 cut(s) 589, 613
LmnI GCTCC 3 cut(s) 422, 1110, 1301
Lsp1109I GCAGC 2 cut(s) 124, 1045
LweI GCATC 1 cut(s) 513
MaeI CTAG 2 cut(s) 779, 977
MaeIII GTNAC 1 cut(s) 859
MboII GAAGA 5 cut(s) 344, 464, 612, 1059, 1140
MflI RGATCY 6 cut(s) 55, 363, 401, 434, 540, 1286
MhlI GDGCHC 1 cut(s) 272
MlsI TGGCCA 2 cut(s) 249, 390
MluCI AATT 7 cut(s) 49, 122, 255, 441, 465, 575, 1031
MluNI TGGCCA 2 cut(s) 249, 390
MlyI GAGTC 3 cut(s) 543, 1195, 1204
Mox20I TGGCCA 2 cut(s) 249, 390
MroI TCCGGA 1 cut(s) 543
MroXI GAANNNNTTC 3 cut(s) 198, 336, 1221
MscI TGGCCA 2 cut(s) 249, 390
MseI TTAA 1 cut(s) 468
MslI CAYNNNNRTG 1 cut(s) 852
Msp20I TGGCCA 2 cut(s) 249, 390
MspI CCGG 4 cut(s) 531, 544, 790, 1087
MspR9I CCNGG 8 cut(s) 101, 155, 368, 531, 688, 881, 1088, 1259
MvaI CCWGG 6 cut(s) 101, 155, 368, 688, 881, 1259
MwoI GCNNNNNNNGC 1 cut(s) 1110
NciI CCSGG 2 cut(s) 531, 1088
NlaIII CATG 4 cut(s) 44, 71, 377, 851
NlaIV GGNNCC 9 cut(s) 270, 365, 485, 542, 794, 1085, 1091, 1112, 1170
NmeAIII GCCGAG 2 cut(s) 304, 1139
NmuCI GTSAC 1 cut(s) 859
NspI RCATGY 1 cut(s) 71
NspV TTCGAA 1 cut(s) 496
PagI TCATGA 1 cut(s) 847
PceI AGGCCT 2 cut(s) 668, 691
PcsI WCGNNNNNNNCGW 1 cut(s) 898
PdmI GAANNNNTTC 3 cut(s) 198, 336, 1221
PfeI GAWTC 7 cut(s) 150, 498, 820, 914, 984, 1048, 1184
PfoI TCCNGGA 1 cut(s) 879
PinAI ACCGGT 1 cut(s) 789
PkrI GCNGC 2 cut(s) 139, 1060
PleI GAGTC 3 cut(s) 542, 1195, 1204
PpsI GAGTC 3 cut(s) 542, 1195, 1204
PshBI ATTAAT 1 cut(s) 468
Psp6I CCWGG 6 cut(s) 99, 153, 366, 686, 879, 1257
PspFI CCCAGC 3 cut(s) 8, 654, 698
PspGI CCWGG 6 cut(s) 99, 153, 366, 686, 879, 1257
PspN4I GGNNCC 9 cut(s) 270, 365, 485, 542, 794, 1085, 1091, 1112, 1170
PspOMI GGGCCC 1 cut(s) 268
PspPI GGNCC 8 cut(s) 157, 268, 269, 343, 792, 1084, 1090, 1279
PsuI RGATCY 6 cut(s) 55, 363, 401, 434, 540, 1286
RsaI GTAC 2 cut(s) 1147, 1233
RsaNI GTAC 2 cut(s) 1146, 1232
RseI CAYNNNNRTG 1 cut(s) 852
SaqAI TTAA 1 cut(s) 468
SatI GCNGC 2 cut(s) 138, 1059
Sau96I GGNCC 8 cut(s) 157, 268, 269, 343, 792, 1084, 1090, 1279
SchI GAGTC 3 cut(s) 543, 1195, 1204
ScrFI CCNGG 8 cut(s) 101, 155, 368, 531, 688, 881, 1088, 1259
SduI GDGCHC 1 cut(s) 272
SfaNI GCATC 1 cut(s) 513
SfuI TTCGAA 1 cut(s) 496
SinI GGWCC 4 cut(s) 157, 343, 792, 1279
SmiMI CAYNNNNRTG 1 cut(s) 852
SmlI CTYRAG 1 cut(s) 896
SmoI CTYRAG 1 cut(s) 896
SpeI ACTAGT 1 cut(s) 778
Sse9I AATT 7 cut(s) 49, 122, 255, 441, 465, 575, 1031
SseBI AGGCCT 2 cut(s) 668, 691
SsiI CCGC 3 cut(s) 140, 293, 1074
SspMI CTAG 2 cut(s) 779, 977
StuI AGGCCT 2 cut(s) 668, 691
StyD4I CCNGG 8 cut(s) 99, 153, 366, 529, 686, 879, 1086, 1257
TaqI TCGA 3 cut(s) 261, 496, 1208
TasI AATT 7 cut(s) 49, 122, 255, 441, 465, 575, 1031
TfiI GAWTC 7 cut(s) 150, 498, 820, 914, 984, 1048, 1184
Tru1I TTAA 1 cut(s) 468
Tru9I TTAA 1 cut(s) 468
TscAI CASTG 4 cut(s) 22, 778, 822, 868
TseFI GTSAC 1 cut(s) 859
TseI GCWGC 2 cut(s) 137, 1058
Tsp45I GTSAC 1 cut(s) 859
TspDTI ATGAA 3 cut(s) 17, 864, 906
TspGWI ACGGA 2 cut(s) 149, 730
TspRI CASTG 4 cut(s) 22, 778, 822, 868
VpaK11BI GGWCC 4 cut(s) 157, 343, 792, 1279
VspI ATTAAT 1 cut(s) 468
XapI RAATTY 4 cut(s) 49, 122, 255, 575
XceI RCATGY 1 cut(s) 71
XmnI GAANNNNTTC 3 cut(s) 198, 336, 1221
XspI CTAG 2 cut(s) 779, 977
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.