Rmu_sc0003832.1_g000023

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003832.1
OG0000073
Physical Location & Seq
Reverse (-)
124372 .. 126024
1653 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003832.1_g000023.1.cds

Sequence Viewer

Length: 1653 bp
atggctgatgtggctgcacttagtaatggcccaatcaacaaggagccatctgcatctactgtggagatgagtacaaacaatctggtcatccaaatgaagaacaagctatctattggtggaataaggaatatacgtcttattgccaccattttcgcagataaagtccctcacaaacctgccataatgaccaccctcaaacgaatctggtcacaatatggaaatgttaatataacagctcgtgatgagaaagatccggaagacagggttttcatcgtaactgctgaagatgaagaaatggctaattctatcctcgacaactccccatggactgctctgggattcaatgtccatgttcaggtatggcctgcaaccaaagctattgaagatattcccacacacctgattgctttttggatgcaaataagaggtgtgcctctctgtctatatgtggagtcaaatgttagggatatggttacccatttcggtgagttcatgactatggatgaccctctcaatggtggtgatggaacctacagtttccttagagtccgcgtgctgttcgatggaagcaaacccctgctggctggtttcaggcttcctagagatgatggctctgtttcgtgggttgaagtcaagtatgaaaagcttgcaaagttttgttatcactgtggcagattagggcataaccacaacatcagagccccttgtatgaggctagttgattcccgaaatgaaaatgtggaacttggtagctggatgtcaacttcagcttttcgccgaccagttagacaaccagttcaatctccacatgcggtggtgcaggaagcccaagcccaatcagccgcggagaccattccggcaatgccaatctctagacggagaagggcaggtcaactttttgaaccttttggtgtagggacagtcggccaaaattccagttctcaaggtgctctctctgcaagcgcagaaagcagcccctctgaaagcagcccctctgaccgggttcaaagctggacaagaccatacgagggctcagggaatcttttacagccccccacaaataaccaccctctctctggtcaggtttctcatcataatatgcaactggcacataggataaatcttccttcattcccaaataatttcatgacccaaggtagtaaccaatcttacttcccaaatatcctgaccccttctcaaccaaactggtcccacccctatcaatccaactattctcacctcaacttccaatcagataccactgtttttgatagaagtctattaatccctgtccacccccagttaactaacacatccatctcatatcctacgcctcttccttttccctattgccacctcactaggaacacaaccctcacccatctagacaacccccacaccatatctatccctccagttgatattaatattccaatgcccatcattaggaacccatgttccttgagtccaaaaattagctccaagaaaagagtgggctcctctaggccccctagatcaaagagagccaagaaagaagctgcaaagatatttgcatctcgaatgcaagtcgaagagtccaatgaacagggtgatcttattatttatggagctgatcatgatgagggttcctcccctcaaggcggtggcggctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4 zf-RING_2

Protein Analysis

550

Amino Acids

60.98

Weight (kDa)

8.43

Isoelectric Point (pI)

55.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 184, 878
AccII CGCG 2 cut(s) 552, 845
AccIII TCCGGA 1 cut(s) 253
AciI CCGC 6 cut(s) 550, 812, 843, 845, 1641, 1647
AclWI GGATC 1 cut(s) 245
AcoI YGGCCR 1 cut(s) 925
AcsI RAATTY 1 cut(s) 931
AcuI CTGAAG 2 cut(s) 303, 750
AfaI GTAC 1 cut(s) 73
AfiI CCNNNNNNNGG 7 cut(s) 355, 515, 999, 1028, 1076, 1446, 1640
AgsI TTSAA 6 cut(s) 343, 383, 629, 800, 902, 1007
AloI GAACNNNNNNTCC 4 cut(s) 1441, 1442, 1473, 1474
Alw21I GWGCWC 1 cut(s) 952
Alw26I GTCTC 1 cut(s) 842
AlwI GGATC 1 cut(s) 245
Aor13HI TCCGGA 1 cut(s) 253
AoxI GGCC 4 cut(s) 28, 362, 925, 1505
ApeKI GCWGC 4 cut(s) 14, 972, 987, 1538
ApoI RAATTY 1 cut(s) 931
AseI ATTAAT 2 cut(s) 1283, 1425
Asp700I GAANNNNTTC 1 cut(s) 387
AspLEI GCGC 1 cut(s) 965
AspS9I GGNCC 3 cut(s) 29, 1209, 1506
AsuC2I CCSGG 1 cut(s) 1001
AsuHPI GGTGA 5 cut(s) 497, 533, 1229, 1369, 1601
AvaII GGWCC 1 cut(s) 1209
BaeI ACNNNNGTAYC 2 cut(s) 1248, 1281
BanII GRGCYC 3 cut(s) 703, 1034, 1499
BauI CACGAG 1 cut(s) 237
BbsI GAAGAC 1 cut(s) 264
Bbv12I GWGCWC 1 cut(s) 952
BbvI GCAGC 3 cut(s) 984, 999, 1525
BccI CCATC 7 cut(s) 55, 518, 557, 602, 1325, 1389, 1448
BclI TGATCA 1 cut(s) 1612
BcnI CCSGG 1 cut(s) 1001
BcoDI GTCTC 1 cut(s) 842
BfaI CTAG 8 cut(s) 600, 716, 873, 1362, 1385, 1503, 1512, 1651
BfmI CTRYAG 1 cut(s) 532
BfuAI ACCTGC 2 cut(s) 184, 878
BisI GCNGC 6 cut(s) 15, 843, 973, 988, 1539, 1648
BlsI GCNGC 6 cut(s) 16, 844, 974, 989, 1540, 1649
Bme1390I CCNGG 1 cut(s) 1001
Bme18I GGWCC 1 cut(s) 1209
BmgT120I GGNCC 3 cut(s) 29, 1209, 1506
BmiI GGNNCC 7 cut(s) 45, 529, 1211, 1451, 1498, 1508, 1627
BmrFI CCNGG 1 cut(s) 1001
BmrI ACTGGG 1 cut(s) 1294
BmsI GCATC 3 cut(s) 62, 405, 1562
BmuI ACTGGG 1 cut(s) 1294
BpiI GAAGAC 1 cut(s) 264
BplI GAGNNNNNCTC 2 cut(s) 1613, 1645
BpmI CTGGAG 1 cut(s) 1398
Bpu10I CCTNAGC 1 cut(s) 1033
BpuEI CTTGAG 3 cut(s) 927, 1483, 1620
BpuMI CCSGG 1 cut(s) 1001
BsaI GGTCTC 1 cut(s) 842
BsaJI CCNNGG 3 cut(s) 323, 843, 1153
BsaWI WCCGGW 1 cut(s) 253
Bsc4I CCNNNNNNNGG 7 cut(s) 355, 515, 999, 1028, 1076, 1446, 1640
Bse1I ACTGG 7 cut(s) 782, 794, 936, 1110, 1211, 1300, 1415
Bse3DI GCAATG 1 cut(s) 867
BseAI TCCGGA 1 cut(s) 253
BseDI CCNNGG 3 cut(s) 323, 843, 1153
BseGI GGATG 5 cut(s) 87, 420, 508, 762, 1313
BseLI CCNNNNNNNGG 7 cut(s) 355, 515, 999, 1028, 1076, 1446, 1640
BseMI GCAATG 1 cut(s) 867
BseMII CTCAG 1 cut(s) 1047
BseNI ACTGG 7 cut(s) 782, 794, 936, 1110, 1211, 1300, 1415
BseRI GAGGAG 1 cut(s) 1489
BseXI GCAGC 3 cut(s) 984, 999, 1525
BsgI GTGCAG 1 cut(s) 839
Bsh1236I CGCG 2 cut(s) 552, 845
BshFI GGCC 4 cut(s) 30, 364, 927, 1507
BsiHKAI GWGCWC 1 cut(s) 952
BsiSI CCGG 3 cut(s) 254, 857, 1000
BslFI GGGAC 3 cut(s) 149, 931, 1195
BslI CCNNNNNNNGG 7 cut(s) 355, 515, 999, 1028, 1076, 1446, 1640
BsmAI GTCTC 1 cut(s) 842
BsmFI GGGAC 3 cut(s) 149, 931, 1195
BsmI GAATGC 1 cut(s) 1566
BsnI GGCC 4 cut(s) 30, 364, 927, 1507
Bso31I GGTCTC 1 cut(s) 842
Bsp1286I GDGCHC 4 cut(s) 703, 952, 1034, 1499
Bsp13I TCCGGA 1 cut(s) 253
Bsp143I GATC 4 cut(s) 250, 1514, 1591, 1612
Bsp19I CCATGG 1 cut(s) 323
BspACI CCGC 6 cut(s) 550, 812, 843, 845, 1641, 1647
BspANI GGCC 4 cut(s) 30, 364, 927, 1507
BspCNI CTCAG 1 cut(s) 1046
BspEI TCCGGA 1 cut(s) 253
BspFNI CGCG 2 cut(s) 552, 845
BspHI TCATGA 3 cut(s) 492, 1146, 1615
BspLI GGNNCC 7 cut(s) 45, 529, 1211, 1451, 1498, 1508, 1627
BspMI ACCTGC 2 cut(s) 184, 878
BspPI GGATC 1 cut(s) 245
BspTNI GGTCTC 1 cut(s) 842
BsrDI GCAATG 1 cut(s) 867
BsrI ACTGG 7 cut(s) 782, 794, 936, 1110, 1211, 1300, 1415
BssECI CCNNGG 3 cut(s) 323, 843, 1153
BssMI GATC 4 cut(s) 250, 1514, 1591, 1612
BssSI CACGAG 1 cut(s) 237
BssT1I CCWWGG 2 cut(s) 323, 1153
Bst2BI CACGAG 1 cut(s) 237
Bst4CI ACNGT 5 cut(s) 61, 536, 668, 922, 1264
Bst6I CTCTTC 2 cut(s) 1341, 1566
BstC8I GCNNGC 5 cut(s) 366, 554, 582, 648, 961
BstDEI CTNAG 3 cut(s) 20, 542, 1033
BstDSI CCRYGG 2 cut(s) 323, 843
BstEII GGTNACC 1 cut(s) 472
BstF5I GGATG 5 cut(s) 87, 420, 508, 762, 1313
BstFNI CGCG 2 cut(s) 552, 845
BstHHI GCGC 1 cut(s) 965
BstKTI GATC 4 cut(s) 253, 1517, 1594, 1615
BstMAI GTCTC 1 cut(s) 842
BstMBI GATC 4 cut(s) 250, 1514, 1591, 1612
BstMWI GCNNNNNNNGC 6 cut(s) 11, 374, 839, 956, 969, 1647
BstNSI RCATGY 1 cut(s) 812
BstPI GGTNACC 1 cut(s) 472
BstSCI CCNGG 1 cut(s) 999
BstSFI CTRYAG 1 cut(s) 532
BstUI CGCG 2 cut(s) 552, 845
BstV1I GCAGC 3 cut(s) 984, 999, 1525
BstV2I GAAGAC 1 cut(s) 264
BstX2I RGATCY 1 cut(s) 250
BstYI RGATCY 1 cut(s) 250
BsuRI GGCC 4 cut(s) 30, 364, 927, 1507
BtgI CCRYGG 2 cut(s) 323, 843
BtsCI GGATG 5 cut(s) 87, 420, 508, 762, 1313
BtsIMutI CAGTG 2 cut(s) 664, 1260
BveI ACCTGC 2 cut(s) 184, 878
Cac8I GCNNGC 5 cut(s) 366, 554, 582, 648, 961
CciI TCATGA 3 cut(s) 492, 1146, 1615
CfoI GCGC 1 cut(s) 965
Cfr13I GGNCC 3 cut(s) 29, 1209, 1506
Cfr42I CCGCGG 1 cut(s) 846
Csp6I GTAC 1 cut(s) 72
CspCI CAANNNNNGTGG 2 cut(s) 1249, 1284
CviAII CATG 7 cut(s) 324, 350, 493, 809, 1147, 1455, 1616
CviQI GTAC 1 cut(s) 72
DdeI CTNAG 3 cut(s) 20, 542, 1033
DpnI GATC 4 cut(s) 252, 1516, 1593, 1614
DpnII GATC 4 cut(s) 250, 1514, 1591, 1612
EaeI YGGCCR 1 cut(s) 925
Eam1104I CTCTTC 2 cut(s) 1341, 1566
EarI CTCTTC 2 cut(s) 1341, 1566
Eco130I CCWWGG 2 cut(s) 323, 1153
Eco24I GRGCYC 3 cut(s) 703, 1034, 1499
Eco31I GGTCTC 1 cut(s) 842
Eco47I GGWCC 1 cut(s) 1209
Eco57I CTGAAG 2 cut(s) 303, 750
Eco91I GGTNACC 1 cut(s) 472
EcoO109I RGGNCCY 1 cut(s) 1506
EcoO65I GGTNACC 1 cut(s) 472
EcoT14I CCWWGG 2 cut(s) 323, 1153
EcoT38I GRGCYC 3 cut(s) 703, 1034, 1499
ErhI CCWWGG 2 cut(s) 323, 1153
FaeI CATG 7 cut(s) 327, 353, 496, 812, 1150, 1458, 1619
FaqI GGGAC 3 cut(s) 149, 931, 1195
FatI CATG 7 cut(s) 323, 349, 492, 808, 1146, 1454, 1615
FbaI TGATCA 1 cut(s) 1612
Fnu4HI GCNGC 6 cut(s) 15, 843, 973, 988, 1539, 1648
FokI GGATG 5 cut(s) 74, 427, 515, 769, 1300
FriOI GRGCYC 3 cut(s) 703, 1034, 1499
Fsp4HI GCNGC 6 cut(s) 15, 843, 973, 988, 1539, 1648
FspBI CTAG 8 cut(s) 600, 716, 873, 1362, 1385, 1503, 1512, 1651
GlaI GCGC 1 cut(s) 964
GluI GCNGC 6 cut(s) 15, 843, 973, 988, 1539, 1648
GsuI CTGGAG 1 cut(s) 1398
HaeIII GGCC 4 cut(s) 30, 364, 927, 1507
HapII CCGG 3 cut(s) 254, 857, 1000
HhaI GCGC 1 cut(s) 965
Hin1II CATG 7 cut(s) 327, 353, 496, 812, 1150, 1458, 1619
Hin6I GCGC 1 cut(s) 963
HinP1I GCGC 1 cut(s) 963
HincII GTYRAC 3 cut(s) 762, 893, 1305
HindII GTYRAC 3 cut(s) 762, 893, 1305
HindIII AAGCTT 1 cut(s) 644
HinfI GANTC 8 cut(s) 201, 339, 452, 546, 722, 1039, 1465, 1574
HpaI GTTAAC 1 cut(s) 1305
HpaII CCGG 3 cut(s) 254, 857, 1000
HphI GGTGA 5 cut(s) 497, 533, 1229, 1369, 1601
Hpy166II GTNNAC 4 cut(s) 762, 893, 1294, 1305
Hpy188I TCNGA 4 cut(s) 698, 982, 997, 1255
Hpy8I GTNNAC 4 cut(s) 762, 893, 1294, 1305
HpyAV CCTTC 3 cut(s) 876, 1137, 1203
HpyCH4III ACNGT 5 cut(s) 61, 536, 668, 922, 1264
HpyCH4IV ACGT 1 cut(s) 133
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 374, 839, 956, 969, 1647
HpyF3I CTNAG 3 cut(s) 20, 542, 1033
HpySE526I ACGT 1 cut(s) 133
Hsp92II CATG 7 cut(s) 327, 353, 496, 812, 1150, 1458, 1619
HspAI GCGC 1 cut(s) 963
Kpn2I TCCGGA 1 cut(s) 253
Ksp22I TGATCA 1 cut(s) 1612
KspAI GTTAAC 1 cut(s) 1305
KspI CCGCGG 1 cut(s) 846
Kzo9I GATC 4 cut(s) 250, 1514, 1591, 1612
LmnI GCTCC 4 cut(s) 43, 1484, 1502, 1607
Lsp1109I GCAGC 3 cut(s) 984, 999, 1525
LweI GCATC 3 cut(s) 62, 405, 1562
MaeI CTAG 8 cut(s) 600, 716, 873, 1362, 1385, 1503, 1512, 1651
MaeII ACGT 1 cut(s) 133
MaeIII GTNAC 4 cut(s) 207, 274, 472, 1160
MalI GATC 4 cut(s) 252, 1516, 1593, 1614
MboI GATC 4 cut(s) 250, 1514, 1591, 1612
MboII GAAGA 8 cut(s) 109, 269, 296, 302, 395, 1115, 1328, 1583
MflI RGATCY 1 cut(s) 250
MhlI GDGCHC 4 cut(s) 703, 952, 1034, 1499
MluCI AATT 4 cut(s) 301, 931, 1141, 1473
MlyI GAGTC 4 cut(s) 461, 555, 1474, 1583
MmeI TCCRAC 1 cut(s) 1251
MroI TCCGGA 1 cut(s) 253
MroXI GAANNNNTTC 1 cut(s) 387
MseI TTAA 4 cut(s) 225, 1283, 1304, 1425
MslI CAYNNNNRTG 3 cut(s) 92, 483, 497
MspA1I CMGCKG 1 cut(s) 845
MspI CCGG 3 cut(s) 254, 857, 1000
MspR9I CCNGG 1 cut(s) 1001
Mva1269I GAATGC 1 cut(s) 1566
MvnI CGCG 2 cut(s) 552, 845
MwoI GCNNNNNNNGC 6 cut(s) 11, 374, 839, 956, 969, 1647
NciI CCSGG 1 cut(s) 1001
NcoI CCATGG 1 cut(s) 323
NdeII GATC 4 cut(s) 250, 1514, 1591, 1612
NlaIII CATG 7 cut(s) 327, 353, 496, 812, 1150, 1458, 1619
NlaIV GGNNCC 7 cut(s) 45, 529, 1211, 1451, 1498, 1508, 1627
NmuCI GTSAC 1 cut(s) 207
NspI RCATGY 1 cut(s) 812
PagI TCATGA 3 cut(s) 492, 1146, 1615
PctI GAATGC 1 cut(s) 1566
PdmI GAANNNNTTC 1 cut(s) 387
PfeI GAWTC 4 cut(s) 201, 339, 722, 1039
PkrI GCNGC 6 cut(s) 16, 844, 974, 989, 1540, 1649
PleI GAGTC 4 cut(s) 460, 554, 1473, 1582
PpsI GAGTC 4 cut(s) 460, 554, 1473, 1582
PshBI ATTAAT 2 cut(s) 1283, 1425
PspEI GGTNACC 1 cut(s) 472
PspN4I GGNNCC 7 cut(s) 45, 529, 1211, 1451, 1498, 1508, 1627
PspPI GGNCC 3 cut(s) 29, 1209, 1506
PsuI RGATCY 1 cut(s) 250
RsaI GTAC 1 cut(s) 73
RsaNI GTAC 1 cut(s) 72
RseI CAYNNNNRTG 3 cut(s) 92, 483, 497
SacII CCGCGG 1 cut(s) 846
SaqAI TTAA 4 cut(s) 225, 1283, 1304, 1425
SatI GCNGC 6 cut(s) 15, 843, 973, 988, 1539, 1648
Sau3AI GATC 4 cut(s) 250, 1514, 1591, 1612
Sau96I GGNCC 3 cut(s) 29, 1209, 1506
SchI GAGTC 4 cut(s) 461, 555, 1474, 1583
ScrFI CCNGG 1 cut(s) 1001
SduI GDGCHC 4 cut(s) 703, 952, 1034, 1499
SfaNI GCATC 3 cut(s) 62, 405, 1562
SfcI CTRYAG 1 cut(s) 532
Sfr303I CCGCGG 1 cut(s) 846
SgrBI CCGCGG 1 cut(s) 846
SinI GGWCC 1 cut(s) 1209
SmiMI CAYNNNNRTG 3 cut(s) 92, 483, 497
SmlI CTYRAG 3 cut(s) 942, 1462, 1635
SmoI CTYRAG 3 cut(s) 942, 1462, 1635
Sse9I AATT 4 cut(s) 301, 931, 1141, 1473
SsiI CCGC 6 cut(s) 550, 812, 843, 845, 1641, 1647
SspI AATATT 1 cut(s) 1429
SspMI CTAG 8 cut(s) 600, 716, 873, 1362, 1385, 1503, 1512, 1651
StyD4I CCNGG 1 cut(s) 999
StyI CCWWGG 2 cut(s) 323, 1153
TaaI ACNGT 5 cut(s) 61, 536, 668, 922, 1264
TaiI ACGT 1 cut(s) 136
TaqI TCGA 4 cut(s) 312, 561, 1558, 1569
TasI AATT 4 cut(s) 301, 931, 1141, 1473
TatI WGTACW 1 cut(s) 71
TauI GCSGC 2 cut(s) 845, 1650
TfiI GAWTC 4 cut(s) 201, 339, 722, 1039
Tru1I TTAA 4 cut(s) 225, 1283, 1304, 1425
Tru9I TTAA 4 cut(s) 225, 1283, 1304, 1425
TscAI CASTG 2 cut(s) 671, 1267
TseFI GTSAC 1 cut(s) 207
TseI GCWGC 4 cut(s) 14, 972, 987, 1538
Tsp45I GTSAC 1 cut(s) 207
TspDTI ATGAA 9 cut(s) 110, 259, 303, 481, 654, 747, 1119, 1135, 1596
TspGWI ACGGA 1 cut(s) 892
TspRI CASTG 2 cut(s) 671, 1267
VpaK11BI GGWCC 1 cut(s) 1209
VspI ATTAAT 2 cut(s) 1283, 1425
XapI RAATTY 1 cut(s) 931
XbaI TCTAGA 2 cut(s) 872, 1384
XceI RCATGY 1 cut(s) 812
XcmI CCANNNNNNNNNTGG 2 cut(s) 1073, 1489
XmnI GAANNNNTTC 1 cut(s) 387
XspI CTAG 8 cut(s) 600, 716, 873, 1362, 1385, 1503, 1512, 1651
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.