Rh6BG232400

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0000073
Physical Location & Seq
Forward (+)
43809182 .. 43824854
15673 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG232400.1

Sequence Viewer

Length: 1236 bp
ATGGAGGAAACACAGAAATCTGAGGAGTGCTTGGTAGTGCAGATGAGGAAGAAACTCTCTTTGCGAGATTTAGATAGAAAGATCAGGCTGAATGCTGTGTTTTTTGCAGATAAAATACCAAAAAAGCCAGCCATTTGCAACACGATCAAGACTGTTCTTTCCAGGTTTGGGAAGATTGGTGTGACGGCTAGCAATGAGAGAGATCTCAATGACAAAATGTTTTCTGTCACAGTTGAAGATGAGGATGCTGTTATGGCCATTTTGGAAGGTTCACCCTGGTCCATCATGCGATATTCTGTCCATTTTCAGAGGTGGCCAGAAACCTTGTCCATAGAAGAGCTACCTTGTAACCAGATCACTTTCTGGGTTCAGATCAGGGGAATTCCCCCCTATATGTTTGATGTGGAGAATGTCAGCGAGATGGTTGAAAAGTTTGGAGTCTTTATCAAGATGGATGACCCACTAGAAAGTGATGAAGGTACCTATAGCTATCTTCGTGTTAGGATTATGCTGGATGCTAGAGATCCTCTACCCACTGGATATCAATTACCAAGAGAAGATGGATCAATGAAATGGGTAAGTTTCTCGTATGAGAACATCTCTGACTTTTGCTTTATTTGTGGAAGATTGGGCCACTCAGACTCATCAAGAAGACCCTGTCCAATTGGTCCTGACCCTGAGAATCCAGACAATGAATATGGGGAATGGATGAGAGCTATACCACCCCAGAGACAGAACAGATATGGTCATACCCAGATTCCGGCAAGTTCTCAGCGGACAAGAAGAAGATTTCCAGGTCAGGCTATTTTAACCTTGCAAAGTCAACCAATGAGACAAAATTTAGAGCCCCAACGACCCTCCTTTAGTCATGTCAATGCTCAGTCCCCCCATCATACAACCCCTTTTGTCAGACAGACAATCCAAATCTCTGACGAAAGTACCCATACCACCGTGGGCAACCAGTTGGATTGCAACTATCCTGTCCTCTTAGGACAATCAAACCTCCCCATTAATCTTCCACCTGCAAATCCAACCCTAAGCCACCTTTCAGGCCCACCCCCTGGTTTTAATCCTCTTCCTATTAATGGCCCAAATGTCCTTGATCCCCACCAAAGGCAAAGTCAAATAAACCATAGCATTTTTGGTTCACTTGAGTTTCCCACACATGGGGCTAATCATGCTGAAAAAACACATGTTGCAGCTGTTCGAAGCTGGCCCGGTCAACTCCCAGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4 zf-RING_2

Protein Analysis

411

Amino Acids

46.67

Weight (kDa)

6.36

Isoelectric Point (pI)

47.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC_4 PF14392 171 - 215 2.7e-09 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1030
Acc36I ACCTGC 1 cut(s) 1030
Acc65I GGTACC 1 cut(s) 479
AccB1I GGYRCC 1 cut(s) 479
AccB7I CCANNNNNTGG 1 cut(s) 1061
AciI CCGC 1 cut(s) 775
AclWI GGATC 3 cut(s) 518, 571, 1097
AcoI YGGCCR 2 cut(s) 255, 314
AcsI RAATTY 2 cut(s) 381, 838
AfaI GTAC 2 cut(s) 481, 940
AfiI CCNNNNNNNGG 7 cut(s) 168, 760, 1061, 1085, 1113, 1166, 1167
AflIII ACRYGT 1 cut(s) 1192
AgsI TTSAA 2 cut(s) 236, 428
AjnI CCWGG 4 cut(s) 161, 275, 793, 1060
AluBI AGCT 5 cut(s) 340, 489, 716, 1202, 1212
AluI AGCT 5 cut(s) 340, 489, 716, 1202, 1212
Alw26I GTCTC 2 cut(s) 724, 826
AlwI GGATC 3 cut(s) 518, 571, 1097
AoxI GGCC 6 cut(s) 255, 314, 631, 1051, 1087, 1214
ApeKI GCWGC 1 cut(s) 1199
ApoI RAATTY 2 cut(s) 381, 838
ArsI GACNNNNNNTTYG 2 cut(s) 1105, 1137
AseI ATTAAT 2 cut(s) 1011, 1083
Asp718I GGTACC 1 cut(s) 479
AspS9I GGNCC 6 cut(s) 279, 631, 668, 1052, 1088, 1215
AsuC2I CCSGG 1 cut(s) 1218
AsuHPI GGTGA 1 cut(s) 264
AsuII TTCGAA 1 cut(s) 1207
AsuNHI GCTAGC 1 cut(s) 188
AvaII GGWCC 2 cut(s) 279, 668
BaeI ACNNNNGTAYC 2 cut(s) 922, 955
BalI TGGCCA 2 cut(s) 257, 316
BanI GGYRCC 1 cut(s) 479
BanII GRGCYC 1 cut(s) 849
BbsI GAAGAC 1 cut(s) 658
BbvI GCAGC 1 cut(s) 1211
BccI CCATC 5 cut(s) 290, 415, 445, 554, 897
BceAI ACGGC 1 cut(s) 201
BciT130I CCWGG 4 cut(s) 163, 277, 795, 1062
BcnI CCSGG 1 cut(s) 1218
BcoDI GTCTC 2 cut(s) 724, 826
BfaI CTAG 3 cut(s) 189, 464, 519
BfmI CTRYAG 1 cut(s) 484
BfuAI ACCTGC 1 cut(s) 1030
BglII AGATCT 1 cut(s) 202
BisI GCNGC 1 cut(s) 1200
BlsI GCNGC 1 cut(s) 1201
Bme1390I CCNGG 5 cut(s) 163, 277, 795, 1062, 1218
Bme18I GGWCC 2 cut(s) 279, 668
BmgT120I GGNCC 6 cut(s) 279, 631, 668, 1052, 1088, 1215
BmiI GGNNCC 1 cut(s) 481
BmrFI CCNGG 5 cut(s) 163, 277, 795, 1062, 1218
BmsI GCATC 2 cut(s) 235, 505
BmtI GCTAGC 1 cut(s) 192
BpiI GAAGAC 1 cut(s) 658
BplI GAGNNNNNCTC 2 cut(s) 584, 616
Bpu10I CCTNAGC 1 cut(s) 1037
Bpu14I TTCGAA 1 cut(s) 1207
BpuEI CTTGAG 1 cut(s) 1172
BpuMI CCSGG 1 cut(s) 1218
BsaJI CCNNGG 3 cut(s) 275, 951, 1060
Bsc4I CCNNNNNNNGG 7 cut(s) 168, 760, 1061, 1085, 1113, 1166, 1167
Bse1I ACTGG 2 cut(s) 541, 961
Bse3DI GCAATG 1 cut(s) 199
BseBI CCWGG 4 cut(s) 163, 277, 795, 1062
BseDI CCNNGG 3 cut(s) 275, 951, 1060
BseGI GGATG 4 cut(s) 250, 460, 520, 714
BseLI CCNNNNNNNGG 7 cut(s) 168, 760, 1061, 1085, 1113, 1166, 1167
BseMI GCAATG 1 cut(s) 199
BseMII CTCAG 5 cut(s) 12, 651, 669, 785, 893
BseNI ACTGG 2 cut(s) 541, 961
BseRI GAGGAG 1 cut(s) 38
BseXI GCAGC 1 cut(s) 1211
BseYI CCCAGC 1 cut(s) 1228
BsgI GTGCAG 1 cut(s) 59
BshFI GGCC 6 cut(s) 257, 316, 633, 1053, 1089, 1216
BshNI GGYRCC 1 cut(s) 479
BsiSI CCGG 2 cut(s) 761, 1218
BslFI GGGAC 1 cut(s) 868
BslI CCNNNNNNNGG 7 cut(s) 168, 760, 1061, 1085, 1113, 1166, 1167
BsmAI GTCTC 2 cut(s) 724, 826
BsmFI GGGAC 1 cut(s) 868
BsmI GAATGC 1 cut(s) 97
BsnI GGCC 6 cut(s) 257, 316, 633, 1053, 1089, 1216
Bsp119I TTCGAA 1 cut(s) 1207
Bsp1286I GDGCHC 1 cut(s) 849
Bsp143I GATC 8 cut(s) 81, 144, 202, 354, 372, 523, 563, 1102
BspACI CCGC 1 cut(s) 775
BspANI GGCC 6 cut(s) 257, 316, 633, 1053, 1089, 1216
BspCNI CTCAG 5 cut(s) 13, 650, 670, 784, 892
BspLI GGNNCC 1 cut(s) 481
BspMI ACCTGC 1 cut(s) 1030
BspOI GCTAGC 1 cut(s) 192
BspPI GGATC 3 cut(s) 518, 571, 1097
BspQI GCTCTTC 1 cut(s) 330
BspT104I TTCGAA 1 cut(s) 1207
BspT107I GGYRCC 1 cut(s) 479
BsrDI GCAATG 1 cut(s) 199
BsrI ACTGG 2 cut(s) 541, 961
BssECI CCNNGG 3 cut(s) 275, 951, 1060
BssMI GATC 8 cut(s) 81, 144, 202, 354, 372, 523, 563, 1102
Bst2UI CCWGG 4 cut(s) 163, 277, 795, 1062
Bst4CI ACNGT 3 cut(s) 154, 232, 952
Bst6I CTCTTC 2 cut(s) 330, 1080
BstBI TTCGAA 1 cut(s) 1207
BstC8I GCNNGC 3 cut(s) 129, 190, 1214
BstDEI CTNAG 7 cut(s) 21, 637, 678, 771, 879, 988, 1037
BstDSI CCRYGG 1 cut(s) 951
BstF5I GGATG 4 cut(s) 250, 460, 520, 714
BstKTI GATC 8 cut(s) 84, 147, 205, 357, 375, 526, 566, 1105
BstMAI GTCTC 2 cut(s) 724, 826
BstMBI GATC 8 cut(s) 81, 144, 202, 354, 372, 523, 563, 1102
BstMWI GCNNNNNNNGC 2 cut(s) 254, 1178
BstNI CCWGG 4 cut(s) 163, 277, 795, 1062
BstNSI RCATGY 1 cut(s) 1196
BstSCI CCNGG 5 cut(s) 161, 275, 793, 1060, 1216
BstSFI CTRYAG 1 cut(s) 484
BstV1I GCAGC 1 cut(s) 1211
BstV2I GAAGAC 1 cut(s) 658
BstX2I RGATCY 2 cut(s) 202, 523
BstYI RGATCY 2 cut(s) 202, 523
BsuRI GGCC 6 cut(s) 257, 316, 633, 1053, 1089, 1216
BtgI CCRYGG 1 cut(s) 951
BtsCI GGATG 4 cut(s) 250, 460, 520, 714
BtsIMutI CAGTG 1 cut(s) 534
BveI ACCTGC 1 cut(s) 1030
Cac8I GCNNGC 3 cut(s) 129, 190, 1214
Cfr13I GGNCC 6 cut(s) 279, 631, 668, 1052, 1088, 1215
Csp6I GTAC 2 cut(s) 480, 939
CviAII CATG 5 cut(s) 286, 869, 1166, 1178, 1193
CviQI GTAC 2 cut(s) 480, 939
DdeI CTNAG 7 cut(s) 21, 637, 678, 771, 879, 988, 1037
DpnI GATC 8 cut(s) 83, 146, 204, 356, 374, 525, 565, 1104
DpnII GATC 8 cut(s) 81, 144, 202, 354, 372, 523, 563, 1102
EaeI YGGCCR 2 cut(s) 255, 314
Eam1104I CTCTTC 2 cut(s) 330, 1080
EarI CTCTTC 2 cut(s) 330, 1080
Eco24I GRGCYC 1 cut(s) 849
Eco32I GATATC 1 cut(s) 542
Eco47I GGWCC 2 cut(s) 279, 668
EcoRI GAATTC 1 cut(s) 381
EcoRII CCWGG 4 cut(s) 161, 275, 793, 1060
EcoRV GATATC 1 cut(s) 542
EcoT38I GRGCYC 1 cut(s) 849
FaeI CATG 5 cut(s) 289, 872, 1169, 1181, 1196
FaqI GGGAC 1 cut(s) 868
FatI CATG 5 cut(s) 285, 868, 1165, 1177, 1192
Fnu4HI GCNGC 1 cut(s) 1200
FokI GGATG 4 cut(s) 257, 467, 527, 721
FriOI GRGCYC 1 cut(s) 849
Fsp4HI GCNGC 1 cut(s) 1200
FspBI CTAG 3 cut(s) 189, 464, 519
GluI GCNGC 1 cut(s) 1200
GsaI CCCAGC 1 cut(s) 1232
HaeIII GGCC 6 cut(s) 257, 316, 633, 1053, 1089, 1216
HapII CCGG 2 cut(s) 761, 1218
Hin1II CATG 5 cut(s) 289, 872, 1169, 1181, 1196
HincII GTYRAC 2 cut(s) 824, 1223
HindII GTYRAC 2 cut(s) 824, 1223
HinfI GANTC 4 cut(s) 438, 641, 682, 757
HpaII CCGG 2 cut(s) 761, 1218
HphI GGTGA 1 cut(s) 264
Hpy166II GTNNAC 4 cut(s) 272, 824, 1148, 1223
Hpy188I TCNGA 7 cut(s) 22, 309, 372, 604, 640, 911, 931
Hpy188III TCNNGA 5 cut(s) 148, 448, 648, 671, 686
Hpy8I GTNNAC 4 cut(s) 272, 824, 1148, 1223
HpyAV CCTTC 2 cut(s) 260, 470
HpyCH4III ACNGT 3 cut(s) 154, 232, 952
HpyCH4V TGCA 7 cut(s) 40, 107, 138, 817, 972, 1025, 1199
HpyF10VI GCNNNNNNNGC 2 cut(s) 254, 1178
HpyF3I CTNAG 7 cut(s) 21, 637, 678, 771, 879, 988, 1037
Hsp92II CATG 5 cut(s) 289, 872, 1169, 1181, 1196
KpnI GGTACC 1 cut(s) 483
Kzo9I GATC 8 cut(s) 81, 144, 202, 354, 372, 523, 563, 1102
LguI GCTCTTC 1 cut(s) 330
Lsp1109I GCAGC 1 cut(s) 1211
LweI GCATC 2 cut(s) 235, 505
MaeI CTAG 3 cut(s) 189, 464, 519
MaeIII GTNAC 3 cut(s) 181, 226, 347
MalI GATC 8 cut(s) 83, 146, 204, 356, 374, 525, 565, 1104
MboI GATC 8 cut(s) 81, 144, 202, 354, 372, 523, 563, 1102
MfeI CAATTG 1 cut(s) 663
MflI RGATCY 2 cut(s) 202, 523
MhlI GDGCHC 1 cut(s) 849
MlsI TGGCCA 2 cut(s) 257, 316
MluCI AATT 4 cut(s) 381, 545, 663, 838
MluNI TGGCCA 2 cut(s) 257, 316
MlyI GAGTC 2 cut(s) 447, 635
MmeI TCCRAC 2 cut(s) 945, 1055
MnlI CCTC 9 cut(s) 16, 39, 235, 303, 537, 868, 995, 1013, 1083
Mox20I TGGCCA 2 cut(s) 257, 316
MscI TGGCCA 2 cut(s) 257, 316
MseI TTAA 4 cut(s) 809, 1011, 1068, 1083
MslI CAYNNNNRTG 1 cut(s) 873
Msp20I TGGCCA 2 cut(s) 257, 316
MspA1I CMGCKG 2 cut(s) 775, 1202
MspI CCGG 2 cut(s) 761, 1218
MspR9I CCNGG 5 cut(s) 163, 277, 795, 1062, 1218
MunI CAATTG 1 cut(s) 663
Mva1269I GAATGC 1 cut(s) 97
MvaI CCWGG 4 cut(s) 163, 277, 795, 1062
MwoI GCNNNNNNNGC 2 cut(s) 254, 1178
NciI CCSGG 1 cut(s) 1218
NdeII GATC 8 cut(s) 81, 144, 202, 354, 372, 523, 563, 1102
NheI GCTAGC 1 cut(s) 188
NlaIII CATG 5 cut(s) 289, 872, 1169, 1181, 1196
NlaIV GGNNCC 1 cut(s) 481
NmuCI GTSAC 2 cut(s) 181, 226
NspI RCATGY 1 cut(s) 1196
NspV TTCGAA 1 cut(s) 1207
PaqCI CACCTGC 1 cut(s) 1030
PciI ACATGT 1 cut(s) 1192
PciSI GCTCTTC 1 cut(s) 330
PctI GAATGC 1 cut(s) 97
PfeI GAWTC 2 cut(s) 682, 757
PflFI GACNNNGTC 1 cut(s) 657
PflMI CCANNNNNTGG 1 cut(s) 1061
PkrI GCNGC 1 cut(s) 1201
PleI GAGTC 2 cut(s) 446, 635
PpsI GAGTC 2 cut(s) 446, 635
PscI ACATGT 1 cut(s) 1192
PshBI ATTAAT 2 cut(s) 1011, 1083
Psp6I CCWGG 4 cut(s) 161, 275, 793, 1060
PspFI CCCAGC 1 cut(s) 1228
PspGI CCWGG 4 cut(s) 161, 275, 793, 1060
PspN4I GGNNCC 1 cut(s) 481
PspPI GGNCC 6 cut(s) 279, 631, 668, 1052, 1088, 1215
PsuI RGATCY 2 cut(s) 202, 523
PsyI GACNNNGTC 1 cut(s) 657
PvuII CAGCTG 1 cut(s) 1202
RsaI GTAC 2 cut(s) 481, 940
RsaNI GTAC 2 cut(s) 480, 939
RseI CAYNNNNRTG 1 cut(s) 873
SapI GCTCTTC 1 cut(s) 330
SaqAI TTAA 4 cut(s) 809, 1011, 1068, 1083
SatI GCNGC 1 cut(s) 1200
Sau3AI GATC 8 cut(s) 81, 144, 202, 354, 372, 523, 563, 1102
Sau96I GGNCC 6 cut(s) 279, 631, 668, 1052, 1088, 1215
SchI GAGTC 2 cut(s) 447, 635
ScrFI CCNGG 5 cut(s) 163, 277, 795, 1062, 1218
SduI GDGCHC 1 cut(s) 849
SfaNI GCATC 2 cut(s) 235, 505
SfcI CTRYAG 1 cut(s) 484
SfuI TTCGAA 1 cut(s) 1207
SinI GGWCC 2 cut(s) 279, 668
SmiMI CAYNNNNRTG 1 cut(s) 873
SmlI CTYRAG 1 cut(s) 1151
SmoI CTYRAG 1 cut(s) 1151
Sse9I AATT 4 cut(s) 381, 545, 663, 838
SsiI CCGC 1 cut(s) 775
SspMI CTAG 3 cut(s) 189, 464, 519
StyD4I CCNGG 5 cut(s) 161, 275, 793, 1060, 1216
TaaI ACNGT 3 cut(s) 154, 232, 952
TaqI TCGA 1 cut(s) 1207
TasI AATT 4 cut(s) 381, 545, 663, 838
TfiI GAWTC 2 cut(s) 682, 757
Tru1I TTAA 4 cut(s) 809, 1011, 1068, 1083
Tru9I TTAA 4 cut(s) 809, 1011, 1068, 1083
TscAI CASTG 1 cut(s) 541
TseFI GTSAC 2 cut(s) 181, 226
TseI GCWGC 1 cut(s) 1199
Tsp45I GTSAC 2 cut(s) 181, 226
TspDTI ATGAA 3 cut(s) 489, 584, 708
TspRI CASTG 1 cut(s) 541
Tth111I GACNNNGTC 1 cut(s) 657
Van91I CCANNNNNTGG 1 cut(s) 1061
VpaK11BI GGWCC 2 cut(s) 279, 668
VspI ATTAAT 2 cut(s) 1011, 1083
XapI RAATTY 2 cut(s) 381, 838
XceI RCATGY 1 cut(s) 1196
XcmI CCANNNNNNNNNTGG 1 cut(s) 1139
XspI CTAG 3 cut(s) 189, 464, 519
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.