Rmu_sc0000498.1_g000023

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000498.1
OG0000073
Physical Location & Seq
Forward (+)
104878 .. 108172
3295 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000498.1_g000023.1.cds

Sequence Viewer

Length: 1944 bp
atgcttaacatcgagcttgatggcctcccatcagagaactatctactctacccgacaccttttctggtagaggctcctttcccggtgaccaactgctccgtcctcaggctccttccatgttcttacaggcattggcctagataccaatctattgatgatatcgaaacacacagagccatctattggattcaagcccatgggattccgcttgatcaaattagtgttaacaatgggagaaagttgggaggcttgctgggttctgttattgaagtggaggaccctcttattgcagggaaccagggatatttgagaataagggtaaatccccttcttgccaaactgggggtgaagtatgataactctttgattgctgaactgcctcaaagaccgattttcacccagaaagaatttccactggagttcccctacgctccgacaaccgaaatctttggccgaaacaagaagcagggaggaacgagtcaaattttgaatttggtagagagagatactactgaaagggacaacactagtttggctcactgcacaaaggctgatagtgactactctgctggcttaacacagtccacagatgacatatcactgtttccctcgatgatacaaagaccaaggctgacaaaactagctgtacaacaaagccccaatatgttcgatcctgatgcctatgaggcaatgttcagaaatggtagtattacacgggctttggatgggctgaaacttcattatgggtcatgggttgaccctgagtgtataccaccttgggcctttaagaagaaggatgagtttttcaatgcaaaccccttttttccaattccgttgtccatggacacttttaatccggtgagtcaaccatcatcagtcaaaattatggaactggaagcttttagtgggaagactgtggccacaacatctattgcttcacattctatcccttcctcgaacaaacgtaagaaaaagcaggggagtgactctcaagatgtgcccaagaatactacaaagaaggctaaaatcactcacagcccaaggcttcgtcttttagataactctagaaggggcaggggaaggggaagaagaggaagaagaagtgggaacggacgaactggcaatggtaggatggaggactggaacccccaagcagcaacagataataatttggattcccaacctggattcctcaatgaattgaaggcatttgtgaaatcgaaaaagagaacacaggagtcaactgctcccattactatttctgaaggtatggaggacttaaccccccctccagggctgtggcggctggccgaaatcagctgcaagtacccaatgaattgtattgcttggaactgtcaaggcttggggaagtccttgacagggcagagtttcacgtgggctcgaaaggagaatgggatggttgctttacaagagcgattggataggagtttggttagtgatagttggcttttgaaatggcctaactcttgtctaacccaccttgcacggatcgcttggtgggtggatgaggcggattcttatccaatcataaaggattgctggtacaggactccttcccttcctaatattacacagtggatttcaaacctcaatcgctgcagatctaagctcaaagtttggagtaaaaacaaatttccaaagtgcaacaaagatgagattaaggcttgtttagttgagttggaggagctccaactaaactcaccattcaccagtacaaaacaacaagatgtactagccaataaactaggttctttgtggattaaggaagaaaagtattggcaccaacgctcacttgtgaattggctacaaacgggggattcaaattccagattcttccatctctctactcttcaacgaagacagagaaatcaaattctgaaaattcagaatgagtctggtgcttgggttgtgggtgaagcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

647

Amino Acids

73.52

Weight (kDa)

9.27

Isoelectric Point (pI)

49.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1800
AccB7I CCANNNNNTGG 1 cut(s) 183
AccI GTMKAC 1 cut(s) 769
AciI CCGC 3 cut(s) 206, 1303, 1532
AclWI GGATC 2 cut(s) 665, 1517
AcoI YGGCCR 3 cut(s) 451, 918, 1308
AcsI RAATTY 7 cut(s) 407, 483, 490, 1652, 1843, 1893, 1902
AcuI CTGAAG 1 cut(s) 1284
AcvI CACGTG 1 cut(s) 1395
AfaI GTAC 5 cut(s) 648, 1328, 1565, 1735, 1752
AfiI CCNNNNNNNGG 6 cut(s) 105, 183, 342, 1292, 1293, 1380
AgsI TTSAA 9 cut(s) 191, 269, 490, 808, 1204, 1474, 1605, 1842, 1874
AhlI ACTAGT 1 cut(s) 527
AjnI CCWGG 3 cut(s) 297, 1183, 1291
AluBI AGCT 7 cut(s) 16, 644, 899, 1320, 1630, 1708, 1940
AluI AGCT 7 cut(s) 16, 644, 899, 1320, 1630, 1708, 1940
Alw21I GWGCWC 1 cut(s) 1710
AlwI GGATC 2 cut(s) 665, 1517
AoxI GGCC 7 cut(s) 22, 134, 451, 780, 918, 1308, 1478
ApeKI GCWGC 3 cut(s) 1154, 1320, 1617
ApoI RAATTY 7 cut(s) 407, 483, 490, 1652, 1843, 1893, 1902
AspS9I GGNCC 2 cut(s) 277, 780
AsuC2I CCSGG 1 cut(s) 83
AsuHPI GGTGA 6 cut(s) 97, 358, 388, 871, 1713, 1720
AvaII GGWCC 1 cut(s) 277
AxyI CCTNAGG 1 cut(s) 104
BaeGI GKGCMC 1 cut(s) 1002
BalI TGGCCA 1 cut(s) 920
BanI GGYRCC 1 cut(s) 1800
BanII GRGCYC 2 cut(s) 1402, 1710
BarI GAAGNNNNNNTAC 2 cut(s) 312, 344
BbrPI CACGTG 1 cut(s) 1395
BbsI GAAGAC 2 cut(s) 917, 1885
Bbv12I GWGCWC 1 cut(s) 1710
BbvI GCAGC 3 cut(s) 1166, 1307, 1604
BccI CCATC 8 cut(s) 14, 37, 185, 719, 877, 1126, 1411, 1866
BcgI CGANNNNNNTGC 2 cut(s) 659, 693
BciT130I CCWGG 3 cut(s) 299, 1185, 1293
BclI TGATCA 1 cut(s) 211
BcnI CCSGG 1 cut(s) 83
BcuI ACTAGT 1 cut(s) 527
BfaI CTAG 6 cut(s) 138, 528, 641, 1065, 1754, 1766
BfmI CTRYAG 1 cut(s) 1618
BglI GCCNNNNNGGC 1 cut(s) 686
BglII AGATCT 1 cut(s) 1622
BisI GCNGC 4 cut(s) 1155, 1304, 1321, 1618
BlsI GCNGC 4 cut(s) 1156, 1305, 1322, 1619
Bme1390I CCNGG 4 cut(s) 83, 299, 1185, 1293
Bme18I GGWCC 1 cut(s) 277
BmgT120I GGNCC 2 cut(s) 277, 780
BmiI GGNNCC 6 cut(s) 75, 110, 279, 296, 1145, 1802
BmrFI CCNGG 4 cut(s) 83, 299, 1185, 1293
BmrI ACTGGG 1 cut(s) 350
BmsI GCATC 1 cut(s) 667
BmuI ACTGGG 1 cut(s) 350
BpiI GAAGAC 2 cut(s) 917, 1885
BplI GAGNNNNNCTC 2 cut(s) 973, 1005
BpmI CTGGAG 2 cut(s) 437, 1275
BpuEI CTTGAG 1 cut(s) 975
BpuMI CCSGG 1 cut(s) 83
BsaAI YACGTR 1 cut(s) 1395
BsaBI GATNNNNATC 2 cut(s) 145, 1539
BsaJI CCNNGG 7 cut(s) 196, 298, 626, 776, 840, 1040, 1292
BsaWI WCCGGW 1 cut(s) 856
BsaXI ACNNNNNCTCC 2 cut(s) 1273, 1303
Bsc4I CCNNNNNNNGG 6 cut(s) 105, 183, 342, 1292, 1293, 1380
Bse1I ACTGG 6 cut(s) 345, 420, 897, 1123, 1145, 1731
Bse21I CCTNAGG 1 cut(s) 104
Bse3DI GCAATG 2 cut(s) 696, 1129
Bse8I GATNNNNATC 2 cut(s) 145, 1539
BseBI CCWGG 3 cut(s) 299, 1185, 1293
BseDI CCNNGG 7 cut(s) 196, 298, 626, 776, 840, 1040, 1292
BseGI GGATG 5 cut(s) 730, 802, 1137, 1422, 1531
BseJI GATNNNNATC 2 cut(s) 145, 1539
BseLI CCNNNNNNNGG 6 cut(s) 105, 183, 342, 1292, 1293, 1380
BseMI GCAATG 2 cut(s) 696, 1129
BseMII CTCAG 2 cut(s) 118, 753
BseNI ACTGG 6 cut(s) 345, 420, 897, 1123, 1145, 1731
BseRI GAGGAG 1 cut(s) 1718
BseSI GKGCMC 1 cut(s) 1002
BseXI GCAGC 3 cut(s) 1166, 1307, 1604
BseYI CCCAGC 1 cut(s) 253
BsgI GTGCAG 1 cut(s) 526
BshFI GGCC 7 cut(s) 24, 136, 453, 782, 920, 1310, 1480
BshNI GGYRCC 1 cut(s) 1800
BsiHKAI GWGCWC 1 cut(s) 1710
BsiSI CCGG 2 cut(s) 83, 857
BslFI GGGAC 1 cut(s) 533
BslI CCNNNNNNNGG 6 cut(s) 105, 183, 342, 1292, 1293, 1380
BsmFI GGGAC 1 cut(s) 533
BsnI GGCC 7 cut(s) 24, 136, 453, 782, 920, 1310, 1480
Bsp1286I GDGCHC 3 cut(s) 1002, 1402, 1710
Bsp1407I TGTACA 1 cut(s) 646
Bsp143I GATC 4 cut(s) 211, 670, 1509, 1622
Bsp19I CCATGG 2 cut(s) 196, 840
BspACI CCGC 3 cut(s) 206, 1303, 1532
BspANI GGCC 7 cut(s) 24, 136, 453, 782, 920, 1310, 1480
BspCNI CTCAG 2 cut(s) 117, 754
BspLI GGNNCC 6 cut(s) 75, 110, 279, 296, 1145, 1802
BspMAI CTGCAG 1 cut(s) 1622
BspPI GGATC 2 cut(s) 665, 1517
BspT107I GGYRCC 1 cut(s) 1800
BsrDI GCAATG 2 cut(s) 696, 1129
BsrGI TGTACA 1 cut(s) 646
BsrI ACTGG 6 cut(s) 345, 420, 897, 1123, 1145, 1731
BssECI CCNNGG 7 cut(s) 196, 298, 626, 776, 840, 1040, 1292
BssMI GATC 4 cut(s) 211, 670, 1509, 1622
BssNAI GTATAC 1 cut(s) 770
BssT1I CCWWGG 5 cut(s) 196, 626, 776, 840, 1040
Bst1107I GTATAC 1 cut(s) 770
Bst2UI CCWGG 3 cut(s) 299, 1185, 1293
Bst4CI ACNGT 5 cut(s) 582, 603, 916, 1355, 1596
Bst6I CTCTTC 2 cut(s) 1084, 1875
BstAUI TGTACA 1 cut(s) 646
BstBAI YACGTR 1 cut(s) 1395
BstC8I GCNNGC 3 cut(s) 251, 571, 1308
BstDEI CTNAG 4 cut(s) 104, 762, 1626, 1941
BstDSI CCRYGG 2 cut(s) 196, 840
BstEII GGTNACC 1 cut(s) 85
BstF5I GGATG 5 cut(s) 730, 802, 1137, 1422, 1531
BstKTI GATC 4 cut(s) 214, 673, 1512, 1625
BstMBI GATC 4 cut(s) 211, 670, 1509, 1622
BstMWI GCNNNNNNNGC 3 cut(s) 686, 1303, 1511
BstNI CCWGG 3 cut(s) 299, 1185, 1293
BstPI GGTNACC 1 cut(s) 85
BstSCI CCNGG 4 cut(s) 81, 297, 1183, 1291
BstSFI CTRYAG 1 cut(s) 1618
BstSLI GKGCMC 1 cut(s) 1002
BstV1I GCAGC 3 cut(s) 1166, 1307, 1604
BstV2I GAAGAC 2 cut(s) 917, 1885
BstX2I RGATCY 1 cut(s) 1622
BstXI CCANNNNNNTGG 1 cut(s) 1299
BstYI RGATCY 1 cut(s) 1622
BstZ17I GTATAC 1 cut(s) 770
Bsu36I CCTNAGG 1 cut(s) 104
BsuRI GGCC 7 cut(s) 24, 136, 453, 782, 920, 1310, 1480
BtgI CCRYGG 2 cut(s) 196, 840
BtsCI GGATG 5 cut(s) 730, 802, 1137, 1422, 1531
BtsI GCAGTG 1 cut(s) 538
BtsIMutI CAGTG 4 cut(s) 413, 538, 599, 1601
Cac8I GCNNGC 3 cut(s) 251, 571, 1308
Cfr13I GGNCC 2 cut(s) 277, 780
Csp6I GTAC 5 cut(s) 647, 1327, 1564, 1734, 1751
CviAII CATG 4 cut(s) 117, 197, 750, 841
CviQI GTAC 5 cut(s) 647, 1327, 1564, 1734, 1751
DdeI CTNAG 4 cut(s) 104, 762, 1626, 1941
DpnI GATC 4 cut(s) 213, 672, 1511, 1624
DpnII GATC 4 cut(s) 211, 670, 1509, 1622
EaeI YGGCCR 3 cut(s) 451, 918, 1308
Eam1104I CTCTTC 2 cut(s) 1084, 1875
EarI CTCTTC 2 cut(s) 1084, 1875
EciI GGCGGA 1 cut(s) 1547
Ecl136II GAGCTC 1 cut(s) 1708
Eco130I CCWWGG 5 cut(s) 196, 626, 776, 840, 1040
Eco24I GRGCYC 2 cut(s) 1402, 1710
Eco32I GATATC 1 cut(s) 160
Eco47I GGWCC 1 cut(s) 277
Eco53kI GAGCTC 1 cut(s) 1708
Eco57I CTGAAG 1 cut(s) 1284
Eco72I CACGTG 1 cut(s) 1395
Eco81I CCTNAGG 1 cut(s) 104
Eco91I GGTNACC 1 cut(s) 85
EcoICRI GAGCTC 1 cut(s) 1708
EcoO109I RGGNCCY 1 cut(s) 277
EcoO65I GGTNACC 1 cut(s) 85
EcoRII CCWGG 3 cut(s) 297, 1183, 1291
EcoRV GATATC 1 cut(s) 160
EcoT14I CCWWGG 5 cut(s) 196, 626, 776, 840, 1040
EcoT38I GRGCYC 2 cut(s) 1402, 1710
ErhI CCWWGG 5 cut(s) 196, 626, 776, 840, 1040
FaeI CATG 4 cut(s) 120, 200, 753, 844
FaqI GGGAC 1 cut(s) 533
FatI CATG 4 cut(s) 116, 196, 749, 840
FbaI TGATCA 1 cut(s) 211
FblI GTMKAC 1 cut(s) 769
Fnu4HI GCNGC 4 cut(s) 1155, 1304, 1321, 1618
FokI GGATG 5 cut(s) 737, 809, 1144, 1429, 1538
FriOI GRGCYC 2 cut(s) 1402, 1710
Fsp4HI GCNGC 4 cut(s) 1155, 1304, 1321, 1618
FspBI CTAG 6 cut(s) 138, 528, 641, 1065, 1754, 1766
GluI GCNGC 4 cut(s) 1155, 1304, 1321, 1618
GsaI CCCAGC 1 cut(s) 257
GsuI CTGGAG 2 cut(s) 437, 1275
HaeIII GGCC 7 cut(s) 24, 136, 453, 782, 920, 1310, 1480
HapII CCGG 2 cut(s) 83, 857
Hin1II CATG 4 cut(s) 120, 200, 753, 844
HincII GTYRAC 4 cut(s) 226, 757, 866, 1242
HindII GTYRAC 4 cut(s) 226, 757, 866, 1242
HindIII AAGCTT 2 cut(s) 897, 1938
HpaI GTTAAC 1 cut(s) 226
HpaII CCGG 2 cut(s) 83, 857
HphI GGTGA 6 cut(s) 97, 358, 388, 871, 1713, 1720
Hpy166II GTNNAC 6 cut(s) 226, 585, 757, 770, 866, 1242
Hpy188I TCNGA 6 cut(s) 34, 435, 698, 1264, 1899, 1908
Hpy188III TCNNGA 4 cut(s) 674, 992, 1065, 1848
Hpy8I GTNNAC 6 cut(s) 226, 585, 757, 770, 866, 1242
HpyCH4III ACNGT 5 cut(s) 582, 603, 916, 1355, 1596
HpyCH4IV ACGT 2 cut(s) 964, 1394
HpyCH4V TGCA 7 cut(s) 290, 543, 812, 1323, 1505, 1620, 1665
HpyF10VI GCNNNNNNNGC 3 cut(s) 686, 1303, 1511
HpyF3I CTNAG 4 cut(s) 104, 762, 1626, 1941
HpySE526I ACGT 2 cut(s) 964, 1394
Hsp92II CATG 4 cut(s) 120, 200, 753, 844
Ksp22I TGATCA 1 cut(s) 211
KspAI GTTAAC 1 cut(s) 226
Kzo9I GATC 4 cut(s) 211, 670, 1509, 1622
LmnI GCTCC 7 cut(s) 79, 101, 114, 436, 1252, 1705, 1713
Lsp1109I GCAGC 3 cut(s) 1166, 1307, 1604
LweI GCATC 1 cut(s) 667
MaeI CTAG 6 cut(s) 138, 528, 641, 1065, 1754, 1766
MaeII ACGT 2 cut(s) 964, 1394
MaeIII GTNAC 3 cut(s) 85, 557, 983
MalI GATC 4 cut(s) 213, 672, 1511, 1624
MboI GATC 4 cut(s) 211, 670, 1509, 1622
MflI RGATCY 1 cut(s) 1622
MhlI GDGCHC 3 cut(s) 1002, 1402, 1710
MlsI TGGCCA 1 cut(s) 920
MluNI TGGCCA 1 cut(s) 920
MlyI GAGTC 6 cut(s) 487, 871, 980, 1247, 1564, 1922
MmeI TCCRAC 3 cut(s) 458, 1680, 1735
Mox20I TGGCCA 1 cut(s) 920
MscI TGGCCA 1 cut(s) 920
MseI TTAA 8 cut(s) 6, 225, 575, 786, 852, 1280, 1680, 1782
Msp20I TGGCCA 1 cut(s) 920
MspA1I CMGCKG 1 cut(s) 1320
MspI CCGG 2 cut(s) 83, 857
MspR9I CCNGG 4 cut(s) 83, 299, 1185, 1293
MvaI CCWGG 3 cut(s) 299, 1185, 1293
MwoI GCNNNNNNNGC 3 cut(s) 686, 1303, 1511
NciI CCSGG 1 cut(s) 83
NcoI CCATGG 2 cut(s) 196, 840
NdeII GATC 4 cut(s) 211, 670, 1509, 1622
NlaIII CATG 4 cut(s) 120, 200, 753, 844
NlaIV GGNNCC 6 cut(s) 75, 110, 279, 296, 1145, 1802
NmuCI GTSAC 3 cut(s) 85, 557, 983
PfeI GAWTC 7 cut(s) 187, 202, 1175, 1188, 1535, 1838, 1851
PflMI CCANNNNNTGG 1 cut(s) 183
PkrI GCNGC 4 cut(s) 1156, 1305, 1322, 1619
PleI GAGTC 6 cut(s) 486, 870, 980, 1246, 1564, 1921
PmaCI CACGTG 1 cut(s) 1395
PmlI CACGTG 1 cut(s) 1395
PpsI GAGTC 6 cut(s) 486, 870, 980, 1246, 1564, 1921
Ppu21I YACGTR 1 cut(s) 1395
PpuMI RGGWCCY 1 cut(s) 277
Psp124BI GAGCTC 1 cut(s) 1710
Psp5II RGGWCCY 1 cut(s) 277
Psp6I CCWGG 3 cut(s) 297, 1183, 1291
PspCI CACGTG 1 cut(s) 1395
PspEI GGTNACC 1 cut(s) 85
PspFI CCCAGC 1 cut(s) 253
PspGI CCWGG 3 cut(s) 297, 1183, 1291
PspN4I GGNNCC 6 cut(s) 75, 110, 279, 296, 1145, 1802
PspPI GGNCC 2 cut(s) 277, 780
PspPPI RGGWCCY 1 cut(s) 277
PstI CTGCAG 1 cut(s) 1622
PsuI RGATCY 1 cut(s) 1622
PvuII CAGCTG 1 cut(s) 1320
RsaI GTAC 5 cut(s) 648, 1328, 1565, 1735, 1752
RsaNI GTAC 5 cut(s) 647, 1327, 1564, 1734, 1751
SacI GAGCTC 1 cut(s) 1710
SaqAI TTAA 8 cut(s) 6, 225, 575, 786, 852, 1280, 1680, 1782
SatI GCNGC 4 cut(s) 1155, 1304, 1321, 1618
Sau3AI GATC 4 cut(s) 211, 670, 1509, 1622
Sau96I GGNCC 2 cut(s) 277, 780
SchI GAGTC 6 cut(s) 487, 871, 980, 1247, 1564, 1922
ScrFI CCNGG 4 cut(s) 83, 299, 1185, 1293
SduI GDGCHC 3 cut(s) 1002, 1402, 1710
SfaNI GCATC 1 cut(s) 667
SfcI CTRYAG 1 cut(s) 1618
SinI GGWCC 1 cut(s) 277
SmlI CTYRAG 1 cut(s) 990
SmoI CTYRAG 1 cut(s) 990
SpeI ACTAGT 1 cut(s) 527
SsiI CCGC 3 cut(s) 206, 1303, 1532
SspI AATATT 1 cut(s) 1588
SspMI CTAG 6 cut(s) 138, 528, 641, 1065, 1754, 1766
SstI GAGCTC 1 cut(s) 1710
StyD4I CCNGG 4 cut(s) 81, 297, 1183, 1291
StyI CCWWGG 5 cut(s) 196, 626, 776, 840, 1040
TaaI ACNGT 5 cut(s) 582, 603, 916, 1355, 1596
TaiI ACGT 2 cut(s) 967, 1397
TaqI TCGA 7 cut(s) 12, 162, 611, 669, 956, 1220, 1402
TaqII GACCGA 1 cut(s) 403
TatI WGTACW 3 cut(s) 646, 1733, 1750
TauI GCSGC 1 cut(s) 1306
TfiI GAWTC 7 cut(s) 187, 202, 1175, 1188, 1535, 1838, 1851
Tru1I TTAA 8 cut(s) 6, 225, 575, 786, 852, 1280, 1680, 1782
Tru9I TTAA 8 cut(s) 6, 225, 575, 786, 852, 1280, 1680, 1782
TscAI CASTG 4 cut(s) 420, 545, 606, 1601
TseFI GTSAC 3 cut(s) 85, 557, 983
TseI GCWGC 3 cut(s) 1154, 1320, 1617
Tsp45I GTSAC 3 cut(s) 85, 557, 983
TspDTI ATGAA 3 cut(s) 728, 1212, 1349
TspGWI ACGGA 4 cut(s) 88, 822, 1125, 1522
TspRI CASTG 4 cut(s) 420, 545, 606, 1601
Van91I CCANNNNNTGG 1 cut(s) 183
VpaK11BI GGWCC 1 cut(s) 277
XapI RAATTY 7 cut(s) 407, 483, 490, 1652, 1843, 1893, 1902
XbaI TCTAGA 1 cut(s) 1064
XmiI GTMKAC 1 cut(s) 769
XspI CTAG 6 cut(s) 138, 528, 641, 1065, 1754, 1766
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.