Rmu_sc0000868.1_g000005

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000868.1
OG0000073
Physical Location & Seq
Forward (+)
29241 .. 31040
1800 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000868.1_g000005.1.cds

Sequence Viewer

Length: 1104 bp
atggggtcctcttcggggaaccatgaggaaattcccttctacgatgagggtattattgaagcaatgtgtgtcaactttgaggacagtgcagactttcttgacctggaatttggcatcaacctgctgggaattctcattgctgatgaggaaccgggcttgggtggcatcaaggctactcttatgggaatctggagaacccttgggaagatccggataataagagtgaagaaaaatacttactgtctcacagtgggctctgagaaactagctgccaaactgattgatgatagcccctggaacatcaaagggtactgcttctctgtccgccattggcctaggaaattgggtaatgttctgggctccgtcattgaggttgaggacccactatccactggtaaccgtggatcctccacaaaaacccgtgtttacatagaattcattccccctggaattcccctatccccgacaaccagaattttcagtcggggaaagattccggccaattcaaattctgggaagatggtatctactgatggggatgggtcgtctcgggcacaagactcaactattgatgtagacatatcctacagacctgttgcaagtgaaaaagacagttccatggcccctacagtgataccaaaactaagatacacaagacagggacctagcatgtttgacccagatgctcacggggcaatgttccgcaatggaagtgtcaccagggctatggagtgcattccaccttgggcttttaccaataagcaagattactacaaagctaactatttcttccctgttcctctagaagtggaccaacttgatgggcccagaaacatggctaactcggtggaattagtggaactaccacaacctgttatggactctcacgagagtttacccactccagctgtcaagacttacaagaaaagaccaaaaagagttgcagatgatgcaggtgcagtgaatgttcccacaaaaaaatccaaagttattctaagtccaagtcgtagacctatcttctggaggtgggagaggcagaggcagaggtcgccgaggcaggggaagaggaagggctgttgtggaaggcaaaatggagtgttttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_3 zf-CCHC_4

Protein Analysis

367

Amino Acids

40.82

Weight (kDa)

9.25

Isoelectric Point (pI)

48.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 944
Acc36I ACCTGC 2 cut(s) 129, 944
AccI GTMKAC 2 cut(s) 576, 1009
AccIII TCCGGA 1 cut(s) 210
AciI CCGC 2 cut(s) 325, 703
AclWI GGATC 3 cut(s) 202, 399, 412
AcoI YGGCCR 1 cut(s) 498
AcsI RAATTY 7 cut(s) 30, 107, 129, 434, 450, 474, 508
AfaI GTAC 1 cut(s) 311
AfiI CCNNNNNNNGG 3 cut(s) 15, 158, 1058
AgsI TTSAA 2 cut(s) 59, 507
AjnI CCWGG 4 cut(s) 102, 293, 445, 719
AluBI AGCT 3 cut(s) 269, 779, 908
AluI AGCT 3 cut(s) 269, 779, 908
Alw26I GTCTC 2 cut(s) 248, 552
AlwI GGATC 3 cut(s) 202, 399, 412
Ama87I CYCGRG 1 cut(s) 549
Aor13HI TCCGGA 1 cut(s) 210
AoxI GGCC 4 cut(s) 332, 498, 621, 824
ApaI GGGCCC 1 cut(s) 828
ApeKI GCWGC 1 cut(s) 269
ApoI RAATTY 7 cut(s) 30, 107, 129, 434, 450, 474, 508
ArsI GACNNNNNNTTYG 2 cut(s) 92, 124
Asp700I GAANNNNTTC 1 cut(s) 438
AspA2I CCTAGG 1 cut(s) 335
AspS9I GGNCC 7 cut(s) 6, 379, 622, 662, 811, 824, 825
AsuC2I CCSGG 1 cut(s) 153
AsuHPI GGTGA 1 cut(s) 709
AvaI CYCGRG 1 cut(s) 549
AvaII GGWCC 4 cut(s) 6, 379, 662, 811
AvrII CCTAGG 1 cut(s) 335
BaeGI GKGCMC 2 cut(s) 556, 828
BamHI GGATCC 1 cut(s) 404
BanII GRGCYC 3 cut(s) 257, 362, 828
BauI CACGAG 1 cut(s) 887
BbvI GCAGC 1 cut(s) 256
BccI CCATC 4 cut(s) 514, 527, 533, 815
BciT130I CCWGG 4 cut(s) 104, 295, 447, 721
BcnI CCSGG 1 cut(s) 153
BcoDI GTCTC 2 cut(s) 248, 552
BfaI CTAG 4 cut(s) 266, 336, 666, 803
BfmI CTRYAG 2 cut(s) 586, 627
BfuAI ACCTGC 2 cut(s) 129, 944
BisI GCNGC 1 cut(s) 270
BlnI CCTAGG 1 cut(s) 335
BlsI GCNGC 1 cut(s) 271
Bme1390I CCNGG 5 cut(s) 104, 153, 295, 447, 721
Bme18I GGWCC 4 cut(s) 6, 379, 662, 811
BmeT110I CYCGRG 1 cut(s) 549
BmgT120I GGNCC 7 cut(s) 6, 379, 622, 662, 811, 824, 825
BmiI GGNNCC 9 cut(s) 7, 20, 150, 361, 381, 406, 624, 663, 826
BmrFI CCNGG 5 cut(s) 104, 153, 295, 447, 721
BmsI GCATC 4 cut(s) 123, 174, 673, 940
BpmI CTGGAG 3 cut(s) 211, 888, 1042
BpuMI CCSGG 1 cut(s) 153
BsaJI CCNNGG 9 cut(s) 199, 293, 335, 400, 445, 618, 720, 743, 1052
BsaWI WCCGGW 1 cut(s) 210
Bsc4I CCNNNNNNNGG 3 cut(s) 15, 158, 1058
Bse1I ACTGG 1 cut(s) 397
Bse3DI GCAATG 4 cut(s) 69, 135, 702, 712
BseAI TCCGGA 1 cut(s) 210
BseBI CCWGG 4 cut(s) 104, 295, 447, 721
BseDI CCNNGG 9 cut(s) 199, 293, 335, 400, 445, 618, 720, 743, 1052
BseGI GGATG 1 cut(s) 544
BseLI CCNNNNNNNGG 3 cut(s) 15, 158, 1058
BseMI GCAATG 4 cut(s) 69, 135, 702, 712
BseMII CTCAG 1 cut(s) 249
BseNI ACTGG 1 cut(s) 397
BseSI GKGCMC 2 cut(s) 556, 828
BseXI GCAGC 1 cut(s) 256
BseYI CCCAGC 1 cut(s) 124
BsgI GTGCAG 2 cut(s) 108, 978
BshFI GGCC 4 cut(s) 334, 500, 623, 826
BsiHKCI CYCGRG 1 cut(s) 549
BsiSI CCGG 3 cut(s) 152, 211, 497
BslFI GGGAC 1 cut(s) 675
BslI CCNNNNNNNGG 3 cut(s) 15, 158, 1058
BsmAI GTCTC 2 cut(s) 248, 552
BsmBI CGTCTC 1 cut(s) 552
BsmFI GGGAC 1 cut(s) 675
BsmI GAATGC 1 cut(s) 735
BsnI GGCC 4 cut(s) 334, 500, 623, 826
BsoBI CYCGRG 1 cut(s) 549
Bsp120I GGGCCC 1 cut(s) 824
Bsp1286I GDGCHC 4 cut(s) 257, 362, 556, 828
Bsp13I TCCGGA 1 cut(s) 210
Bsp143I GATC 2 cut(s) 207, 404
Bsp19I CCATGG 1 cut(s) 618
BspACI CCGC 2 cut(s) 325, 703
BspANI GGCC 4 cut(s) 334, 500, 623, 826
BspCNI CTCAG 1 cut(s) 250
BspEI TCCGGA 1 cut(s) 210
BspLI GGNNCC 9 cut(s) 7, 20, 150, 361, 381, 406, 624, 663, 826
BspMI ACCTGC 2 cut(s) 129, 944
BspPI GGATC 3 cut(s) 202, 399, 412
BsrDI GCAATG 4 cut(s) 69, 135, 702, 712
BsrI ACTGG 1 cut(s) 397
BssECI CCNNGG 9 cut(s) 199, 293, 335, 400, 445, 618, 720, 743, 1052
BssMI GATC 2 cut(s) 207, 404
BssSI CACGAG 1 cut(s) 887
BssT1I CCWWGG 4 cut(s) 199, 335, 618, 743
Bst2BI CACGAG 1 cut(s) 887
Bst2UI CCWGG 4 cut(s) 104, 295, 447, 721
Bst4CI ACNGT 6 cut(s) 86, 242, 250, 401, 614, 631
Bst6I CTCTTC 2 cut(s) 16, 1058
BstAPI GCANNNNNTGC 1 cut(s) 950
BstDEI CTNAG 3 cut(s) 258, 644, 995
BstDSI CCRYGG 2 cut(s) 400, 618
BstEII GGTNACC 1 cut(s) 395
BstF5I GGATG 1 cut(s) 544
BstKTI GATC 2 cut(s) 210, 407
BstMAI GTCTC 2 cut(s) 248, 552
BstMBI GATC 2 cut(s) 207, 404
BstMWI GCNNNNNNNGC 4 cut(s) 162, 692, 950, 1048
BstNI CCWGG 4 cut(s) 104, 295, 447, 721
BstNSI RCATGY 1 cut(s) 673
BstPI GGTNACC 1 cut(s) 395
BstSCI CCNGG 5 cut(s) 102, 151, 293, 445, 719
BstSFI CTRYAG 2 cut(s) 586, 627
BstSLI GKGCMC 2 cut(s) 556, 828
BstV1I GCAGC 1 cut(s) 256
BstX2I RGATCY 2 cut(s) 207, 404
BstXI CCANNNNNNTGG 3 cut(s) 727, 821, 835
BstYI RGATCY 2 cut(s) 207, 404
BsuRI GGCC 4 cut(s) 334, 500, 623, 826
BtgI CCRYGG 2 cut(s) 400, 618
BtsCI GGATG 1 cut(s) 544
BtsI GCAGTG 1 cut(s) 966
BtsIMutI CAGTG 5 cut(s) 91, 255, 390, 636, 966
BveI ACCTGC 2 cut(s) 129, 944
Cfr13I GGNCC 7 cut(s) 6, 379, 622, 662, 811, 824, 825
Csp6I GTAC 1 cut(s) 310
CviAII CATG 4 cut(s) 23, 619, 670, 835
CviQI GTAC 1 cut(s) 310
DdeI CTNAG 3 cut(s) 258, 644, 995
DpnI GATC 2 cut(s) 209, 406
DpnII GATC 2 cut(s) 207, 404
EaeI YGGCCR 1 cut(s) 498
Eam1104I CTCTTC 2 cut(s) 16, 1058
EarI CTCTTC 2 cut(s) 16, 1058
EciI GGCGGA 1 cut(s) 314
Eco130I CCWWGG 4 cut(s) 199, 335, 618, 743
Eco24I GRGCYC 3 cut(s) 257, 362, 828
Eco47I GGWCC 4 cut(s) 6, 379, 662, 811
Eco88I CYCGRG 1 cut(s) 549
Eco91I GGTNACC 1 cut(s) 395
EcoO109I RGGNCCY 3 cut(s) 6, 379, 662
EcoO65I GGTNACC 1 cut(s) 395
EcoRI GAATTC 3 cut(s) 129, 434, 450
EcoRII CCWGG 4 cut(s) 102, 293, 445, 719
EcoT14I CCWWGG 4 cut(s) 199, 335, 618, 743
EcoT38I GRGCYC 3 cut(s) 257, 362, 828
ErhI CCWWGG 4 cut(s) 199, 335, 618, 743
Esp3I CGTCTC 1 cut(s) 552
FaeI CATG 4 cut(s) 26, 622, 673, 838
FaiI YATR 9 cut(s) 24, 182, 431, 581, 620, 671, 728, 836, 878
FaqI GGGAC 1 cut(s) 675
FatI CATG 4 cut(s) 22, 618, 669, 834
FblI GTMKAC 2 cut(s) 576, 1009
Fnu4HI GCNGC 1 cut(s) 270
FokI GGATG 1 cut(s) 551
FriOI GRGCYC 3 cut(s) 257, 362, 828
Fsp4HI GCNGC 1 cut(s) 270
FspBI CTAG 4 cut(s) 266, 336, 666, 803
GluI GCNGC 1 cut(s) 270
GsaI CCCAGC 1 cut(s) 128
GsuI CTGGAG 3 cut(s) 211, 888, 1042
HaeIII GGCC 4 cut(s) 334, 500, 623, 826
HapII CCGG 3 cut(s) 152, 211, 497
Hin1II CATG 4 cut(s) 26, 622, 673, 838
HincII GTYRAC 1 cut(s) 73
HindII GTYRAC 1 cut(s) 73
HinfI GANTC 4 cut(s) 186, 493, 560, 881
HpaII CCGG 3 cut(s) 152, 211, 497
HphI GGTGA 1 cut(s) 709
Hpy166II GTNNAC 6 cut(s) 73, 427, 577, 811, 896, 1010
Hpy188I TCNGA 1 cut(s) 259
Hpy188III TCNNGA 7 cut(s) 98, 190, 211, 803, 887, 913, 1021
Hpy8I GTNNAC 6 cut(s) 73, 427, 577, 811, 896, 1010
HpyAV CCTTC 3 cut(s) 46, 1063, 1077
HpyCH4III ACNGT 6 cut(s) 86, 242, 250, 401, 614, 631
HpyCH4V TGCA 6 cut(s) 89, 599, 735, 944, 953, 959
HpyF10VI GCNNNNNNNGC 4 cut(s) 162, 692, 950, 1048
HpyF3I CTNAG 3 cut(s) 258, 644, 995
Hsp92II CATG 4 cut(s) 26, 622, 673, 838
Kpn2I TCCGGA 1 cut(s) 210
Kzo9I GATC 2 cut(s) 207, 404
LmnI GCTCC 1 cut(s) 365
Lsp1109I GCAGC 1 cut(s) 256
LweI GCATC 4 cut(s) 123, 174, 673, 940
MaeI CTAG 4 cut(s) 266, 336, 666, 803
MaeIII GTNAC 2 cut(s) 395, 715
MalI GATC 2 cut(s) 209, 406
MboI GATC 2 cut(s) 207, 404
MboII GAAGA 7 cut(s) 3, 217, 238, 529, 781, 1009, 1075
MflI RGATCY 2 cut(s) 207, 404
MhlI GDGCHC 4 cut(s) 257, 362, 556, 828
MlyI GAGTC 2 cut(s) 554, 875
MroI TCCGGA 1 cut(s) 210
MroXI GAANNNNTTC 1 cut(s) 438
MspA1I CMGCKG 1 cut(s) 908
MspI CCGG 3 cut(s) 152, 211, 497
MspR9I CCNGG 5 cut(s) 104, 153, 295, 447, 721
Mva1269I GAATGC 1 cut(s) 735
MvaI CCWGG 4 cut(s) 104, 295, 447, 721
MwoI GCNNNNNNNGC 4 cut(s) 162, 692, 950, 1048
NciI CCSGG 1 cut(s) 153
NcoI CCATGG 1 cut(s) 618
NdeII GATC 2 cut(s) 207, 404
NlaIII CATG 4 cut(s) 26, 622, 673, 838
NlaIV GGNNCC 9 cut(s) 7, 20, 150, 361, 381, 406, 624, 663, 826
NmeAIII GCCGAG 1 cut(s) 1077
NmuCI GTSAC 1 cut(s) 715
NspI RCATGY 1 cut(s) 673
PaqCI CACCTGC 1 cut(s) 944
PctI GAATGC 1 cut(s) 735
PdmI GAANNNNTTC 1 cut(s) 438
PfeI GAWTC 2 cut(s) 186, 493
PkrI GCNGC 1 cut(s) 271
PleI GAGTC 2 cut(s) 554, 875
PpsI GAGTC 2 cut(s) 554, 875
PpuMI RGGWCCY 3 cut(s) 6, 379, 662
Psp5II RGGWCCY 3 cut(s) 6, 379, 662
Psp6I CCWGG 4 cut(s) 102, 293, 445, 719
PspEI GGTNACC 1 cut(s) 395
PspFI CCCAGC 1 cut(s) 124
PspGI CCWGG 4 cut(s) 102, 293, 445, 719
PspN4I GGNNCC 9 cut(s) 7, 20, 150, 361, 381, 406, 624, 663, 826
PspOMI GGGCCC 1 cut(s) 824
PspPI GGNCC 7 cut(s) 6, 379, 622, 662, 811, 824, 825
PspPPI RGGWCCY 3 cut(s) 6, 379, 662
PsuI RGATCY 2 cut(s) 207, 404
PvuII CAGCTG 1 cut(s) 908
RsaI GTAC 1 cut(s) 311
RsaNI GTAC 1 cut(s) 310
SatI GCNGC 1 cut(s) 270
Sau3AI GATC 2 cut(s) 207, 404
Sau96I GGNCC 7 cut(s) 6, 379, 622, 662, 811, 824, 825
SchI GAGTC 2 cut(s) 554, 875
ScrFI CCNGG 5 cut(s) 104, 153, 295, 447, 721
SduI GDGCHC 4 cut(s) 257, 362, 556, 828
SfaNI GCATC 4 cut(s) 123, 174, 673, 940
SfcI CTRYAG 2 cut(s) 586, 627
SinI GGWCC 4 cut(s) 6, 379, 662, 811
SsiI CCGC 2 cut(s) 325, 703
SspMI CTAG 4 cut(s) 266, 336, 666, 803
StyD4I CCNGG 5 cut(s) 102, 151, 293, 445, 719
StyI CCWWGG 4 cut(s) 199, 335, 618, 743
TaaI ACNGT 6 cut(s) 86, 242, 250, 401, 614, 631
TfiI GAWTC 2 cut(s) 186, 493
TscAI CASTG 5 cut(s) 91, 255, 397, 636, 966
TseFI GTSAC 1 cut(s) 715
TseI GCWGC 1 cut(s) 269
Tsp45I GTSAC 1 cut(s) 715
TspDTI ATGAA 1 cut(s) 427
TspGWI ACGGA 1 cut(s) 352
TspRI CASTG 5 cut(s) 91, 255, 397, 636, 966
VpaK11BI GGWCC 4 cut(s) 6, 379, 662, 811
XapI RAATTY 7 cut(s) 30, 107, 129, 434, 450, 474, 508
XbaI TCTAGA 1 cut(s) 802
XceI RCATGY 1 cut(s) 673
XmaJI CCTAGG 1 cut(s) 335
XmiI GTMKAC 2 cut(s) 576, 1009
XmnI GAANNNNTTC 1 cut(s) 438
XspI CTAG 4 cut(s) 266, 336, 666, 803
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.