Rh2BG433500

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000073
Physical Location & Seq
Reverse (-)
61434466 .. 61439266
4801 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG433500.1

Sequence Viewer

Length: 1752 bp
ATGCCTCTCCAACTATCAATAAATAACTTCATTAATGCCCAACCACCAATTCTGAGAATTAAATCCATACTACTTCTCCTACTACTAATACTAACGCTCCATAAACCCATCCATAAACCAATCCAAGAGCTCATCCAAACTCAAAACCGTGCAATGGCTGAAGATAGTAGCAATACTGATAATCTTATTATTCAAATGAGAGATAGGCTCTCAATTGGGTCTTCCAACCAAAAGATTCGCCTGGCTGCTGTGATCTTTGCAGACAAAGCTCCCCACAAGCCATCCACAATTGATATGATCAAAACTGCATGGGTAGGCTTTGGAGGTATCAAAATCACAGCCAGGGATCTTTGGAACCCCGCTGACCACCTTTTTGCGATCACTGCCGATGATGAAAATGTTGCCAAGCTGATCCTAGACAACTCCCCATGGACCATCAAAGGCTTCTCCCTTCATGTCCAGGTGTGGCCTCCCACTTTAGCTATTGAAGAACTACCATCTCATGAAATCGGTTTCTGGGTTCAAATGATGGGTGTCCCTCCCTATATGTCTGCTGTATCAAATGTGAGAGGTATGGTAGAAAGATTTGGTGTTTTCATTGAGATGGAGGATCCACTTGAAGGGGAGGAGGGTACTTTCCCCTTCCTTAGAGTTCGTATGCTAATTGATGCTAGGAAACCCATACCTACTGGTTTCAAGCTTCCAAGAGAGAATGGGTCTGTTTCTTGGGTGGAATTCCGGTACGAAAAGTTGGCAAAATTTTGTTTTGTATGTGGAAGACTTGGTCATGTGGACTCTTCTAGATTCTCATGCCCCAATGGTCGTGAACCAGGGTACGAAGAAGAAGAATATGGAGCTTTCATGGCTATTGACGCCCTTCGCCGTCCAGTTATTCCTCCAAACACCCCTCAGTCGGAATCCCGGCCTGCCCGTCGGAGATCTGCTGGACAAGTCATTGGTCCACCGGGTTTTGAAACTACTGGACAAAGGCCCACTTCTCAATGCAACTTGAGCAACAAGAGTCACATGACCGTTGAGAAATGCAGTGTGGAGTGGCACAAACCCCACAATCCTGACAGAGTCATCACCGCATCAACTTTGCCGTGTTCAACTAAAGGTAATCCTGCTCCTAGTCAGACCATATCCTTCCCTTCTCTGTCACTACAACCCCATCATTCCCCCTTAGACAACTCATTGAATCCTATGTTCTCCATCCCAAACCAAGTGAATTTTTGGCCAAATTATCCCCACCTCATGCAAGTACCACCTCACCAACTCCCACATCTTTTTTCTGCACCCCCAAATCACCCTACTGGCCCACCCTTTAATGATGCCTCCACTCACATGTTCCAGGTTCCCAAGTCTTTTAATCAGATGCCTATGGGTGCTACACTACCCCATCACATGGCAATGCAGTTCCATGCATACCCATCCATGGTTGAGTATTTTTCCAACTTGGCAAACCCAGGGTACCACAACAAGCCCACATACCAGAACTACCCATCTTCTAGCCAAGGCCCAATTTCTCTGAAAAGAGCCTCCCCACATGTGAACACTTTGGGTCCAAACATAACACGTTCCCGAAAAAAATATAAACGTGTCACCAAGCCTAAACCAAGCAATTTGAAAGAACAAGGTGATGTGGCTACTAATGAGCTCAGCTCAAGTGAGGAGGCTTCTGATGCTTCAATGGTTGGAGGCATTTCCCTTCAAGGCGGTGGTGGCTGGCCAACAGCCACAAGGTCACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4 zf-RING_2

Protein Analysis

583

Amino Acids

64.89

Weight (kDa)

9.05

Isoelectric Point (pI)

49.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC_4 PF14392 222 - 266 1.2e-12 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1470
AccB1I GGYRCC 1 cut(s) 1470
AccB7I CCANNNNNTGG 1 cut(s) 1405
AciI CCGC 3 cut(s) 360, 1089, 1716
AclWI GGATC 4 cut(s) 354, 406, 605, 618
AcoI YGGCCR 2 cut(s) 1235, 1727
AcsI RAATTY 3 cut(s) 734, 758, 1228
AcuI CTGAAG 1 cut(s) 180
AcyI GRCGYC 1 cut(s) 873
AfaI GTAC 5 cut(s) 634, 743, 836, 1263, 1472
AfiI CCNNNNNNNGG 5 cut(s) 154, 620, 913, 1405, 1435
AflIII ACRYGT 4 cut(s) 1344, 1546, 1574, 1597
AjnI CCWGG 6 cut(s) 240, 341, 459, 829, 1350, 1465
AjuI GAANNNNNNNTTGG 2 cut(s) 33, 65
AluBI AGCT 8 cut(s) 130, 269, 409, 482, 700, 857, 1657, 1662
AluI AGCT 8 cut(s) 130, 269, 409, 482, 700, 857, 1657, 1662
Alw21I GWGCWC 2 cut(s) 132, 1659
AlwI GGATC 4 cut(s) 354, 406, 605, 618
AoxI GGCC 7 cut(s) 467, 923, 989, 1235, 1315, 1516, 1727
ApeKI GCWGC 1 cut(s) 245
ApoI RAATTY 3 cut(s) 734, 758, 1228
ArsI GACNNNNNNTTYG 2 cut(s) 356, 388
AseI ATTAAT 1 cut(s) 33
Asp718I GGTACC 1 cut(s) 1470
AspS9I GGNCC 6 cut(s) 432, 959, 990, 1316, 1517, 1562
AsuC2I CCSGG 2 cut(s) 922, 966
AsuHPI GGTGA 6 cut(s) 1078, 1262, 1298, 1594, 1649, 1737
AvaII GGWCC 3 cut(s) 432, 959, 1562
BalI TGGCCA 2 cut(s) 1237, 1729
BamHI GGATCC 1 cut(s) 610
BanI GGYRCC 1 cut(s) 1470
BanII GRGCYC 2 cut(s) 132, 1659
BbsI GAAGAC 2 cut(s) 213, 784
Bbv12I GWGCWC 2 cut(s) 132, 1659
BbvI GCAGC 1 cut(s) 232
BceAI ACGGC 2 cut(s) 867, 1087
BciT130I CCWGG 6 cut(s) 242, 343, 461, 831, 1352, 1467
BclI TGATCA 1 cut(s) 297
BcnI CCSGG 2 cut(s) 922, 966
BfaI CTAG 5 cut(s) 416, 672, 801, 1131, 1509
BglII AGATCT 1 cut(s) 938
BisI GCNGC 1 cut(s) 246
BlpI GCTNAGC 1 cut(s) 1658
BlsI GCNGC 1 cut(s) 247
Bme1390I CCNGG 8 cut(s) 242, 343, 461, 831, 922, 966, 1352, 1467
Bme18I GGWCC 3 cut(s) 432, 959, 1562
BmgT120I GGNCC 6 cut(s) 432, 959, 990, 1316, 1517, 1562
BmiI GGNNCC 5 cut(s) 356, 612, 1356, 1472, 1563
BmrFI CCNGG 8 cut(s) 242, 343, 461, 831, 922, 966, 1352, 1467
BmsI GCATC 5 cut(s) 658, 1100, 1321, 1365, 1672
BpiI GAAGAC 2 cut(s) 213, 784
BplI GAGNNNNNCTC 4 cut(s) 192, 224, 1646, 1678
Bpu1102I GCTNAGC 1 cut(s) 1658
BpuEI CTTGAG 2 cut(s) 1030, 1648
BpuMI CCSGG 2 cut(s) 922, 966
BsaHI GRCGYC 1 cut(s) 873
BsaJI CCNNGG 7 cut(s) 342, 428, 830, 1434, 1465, 1466, 1513
BsaWI WCCGGW 1 cut(s) 738
BsaXI ACNNNNNCTCC 4 cut(s) 60, 81, 90, 111
Bsc4I CCNNNNNNNGG 5 cut(s) 154, 620, 913, 1405, 1435
Bse1I ACTGG 4 cut(s) 694, 887, 985, 1318
Bse3DI GCAATG 2 cut(s) 159, 1416
BseBI CCWGG 6 cut(s) 242, 343, 461, 831, 1352, 1467
BseDI CCNNGG 7 cut(s) 342, 428, 830, 1434, 1465, 1466, 1513
BseGI GGATG 5 cut(s) 108, 132, 281, 1212, 1430
BseLI CCNNNNNNNGG 5 cut(s) 154, 620, 913, 1405, 1435
BseMI GCAATG 2 cut(s) 159, 1416
BseMII CTCAG 3 cut(s) 44, 923, 1672
BseNI ACTGG 4 cut(s) 694, 887, 985, 1318
BseRI GAGGAG 2 cut(s) 641, 1685
BseXI GCAGC 1 cut(s) 232
BsgI GTGCAG 1 cut(s) 1278
BshFI GGCC 7 cut(s) 469, 925, 991, 1237, 1317, 1518, 1729
BshNI GGYRCC 1 cut(s) 1470
BsiHKAI GWGCWC 2 cut(s) 132, 1659
BsiSI CCGG 3 cut(s) 739, 922, 965
BslFI GGGAC 1 cut(s) 521
BslI CCNNNNNNNGG 5 cut(s) 154, 620, 913, 1405, 1435
BsmFI GGGAC 1 cut(s) 521
BsnI GGCC 7 cut(s) 469, 925, 991, 1237, 1317, 1518, 1729
Bsp1286I GDGCHC 2 cut(s) 132, 1659
Bsp143I GATC 7 cut(s) 252, 297, 346, 378, 411, 610, 938
Bsp1720I GCTNAGC 1 cut(s) 1658
Bsp19I CCATGG 2 cut(s) 428, 1434
BspACI CCGC 3 cut(s) 360, 1089, 1716
BspANI GGCC 7 cut(s) 469, 925, 991, 1237, 1317, 1518, 1729
BspCNI CTCAG 3 cut(s) 45, 922, 1671
BspHI TCATGA 1 cut(s) 502
BspLI GGNNCC 5 cut(s) 356, 612, 1356, 1472, 1563
BspPI GGATC 4 cut(s) 354, 406, 605, 618
BspT107I GGYRCC 1 cut(s) 1470
BsrDI GCAATG 2 cut(s) 159, 1416
BsrI ACTGG 4 cut(s) 694, 887, 985, 1318
BssECI CCNNGG 7 cut(s) 342, 428, 830, 1434, 1465, 1466, 1513
BssMI GATC 7 cut(s) 252, 297, 346, 378, 411, 610, 938
BssNI GRCGYC 1 cut(s) 873
BssT1I CCWWGG 3 cut(s) 428, 1434, 1513
Bst2UI CCWGG 6 cut(s) 242, 343, 461, 831, 1352, 1467
Bst4CI ACNGT 2 cut(s) 149, 1033
Bst6I CTCTTC 1 cut(s) 802
BstACI GRCGYC 1 cut(s) 873
BstC8I GCNNGC 2 cut(s) 927, 1727
BstDEI CTNAG 5 cut(s) 53, 647, 909, 1183, 1658
BstDSI CCRYGG 2 cut(s) 428, 1434
BstEII GGTNACC 1 cut(s) 1743
BstF5I GGATG 5 cut(s) 108, 132, 281, 1212, 1430
BstKTI GATC 7 cut(s) 255, 300, 349, 381, 414, 613, 941
BstMBI GATC 7 cut(s) 252, 297, 346, 378, 411, 610, 938
BstMWI GCNNNNNNNGC 7 cut(s) 266, 383, 863, 872, 1011, 1682, 1722
BstNI CCWGG 6 cut(s) 242, 343, 461, 831, 1352, 1467
BstNSI RCATGY 2 cut(s) 1348, 1550
BstPI GGTNACC 1 cut(s) 1743
BstSCI CCNGG 8 cut(s) 240, 341, 459, 829, 920, 964, 1350, 1465
BstV1I GCAGC 1 cut(s) 232
BstV2I GAAGAC 2 cut(s) 213, 784
BstX2I RGATCY 3 cut(s) 346, 610, 938
BstYI RGATCY 3 cut(s) 346, 610, 938
BsuRI GGCC 7 cut(s) 469, 925, 991, 1237, 1317, 1518, 1729
BtgI CCRYGG 2 cut(s) 428, 1434
BtsCI GGATG 5 cut(s) 108, 132, 281, 1212, 1430
BtsI GCAGTG 2 cut(s) 381, 1051
BtsIMutI CAGTG 2 cut(s) 381, 1051
Cac8I GCNNGC 2 cut(s) 927, 1727
CciI TCATGA 1 cut(s) 502
Cfr13I GGNCC 6 cut(s) 432, 959, 990, 1316, 1517, 1562
CseI GACGC 1 cut(s) 881
Csp6I GTAC 5 cut(s) 633, 742, 835, 1262, 1471
CviQI GTAC 5 cut(s) 633, 742, 835, 1262, 1471
DdeI CTNAG 5 cut(s) 53, 647, 909, 1183, 1658
DpnI GATC 7 cut(s) 254, 299, 348, 380, 413, 612, 940
DpnII GATC 7 cut(s) 252, 297, 346, 378, 411, 610, 938
EaeI YGGCCR 2 cut(s) 1235, 1727
Eam1104I CTCTTC 1 cut(s) 802
EarI CTCTTC 1 cut(s) 802
Ecl136II GAGCTC 2 cut(s) 130, 1657
Eco130I CCWWGG 3 cut(s) 428, 1434, 1513
Eco24I GRGCYC 2 cut(s) 132, 1659
Eco47I GGWCC 3 cut(s) 432, 959, 1562
Eco53kI GAGCTC 2 cut(s) 130, 1657
Eco57I CTGAAG 1 cut(s) 180
Eco91I GGTNACC 1 cut(s) 1743
EcoICRI GAGCTC 2 cut(s) 130, 1657
EcoO65I GGTNACC 1 cut(s) 1743
EcoRI GAATTC 1 cut(s) 734
EcoRII CCWGG 6 cut(s) 240, 341, 459, 829, 1350, 1465
EcoT14I CCWWGG 3 cut(s) 428, 1434, 1513
EcoT22I ATGCAT 1 cut(s) 1426
EcoT38I GRGCYC 2 cut(s) 132, 1659
ErhI CCWWGG 3 cut(s) 428, 1434, 1513
FalI AAGNNNNNCTT 2 cut(s) 979, 1011
FaqI GGGAC 1 cut(s) 521
FauI CCCGC 1 cut(s) 367
FbaI TGATCA 1 cut(s) 297
Fnu4HI GCNGC 1 cut(s) 246
FokI GGATG 5 cut(s) 95, 119, 268, 1199, 1417
FriOI GRGCYC 2 cut(s) 132, 1659
Fsp4HI GCNGC 1 cut(s) 246
FspBI CTAG 5 cut(s) 416, 672, 801, 1131, 1509
GluI GCNGC 1 cut(s) 246
HaeIII GGCC 7 cut(s) 469, 925, 991, 1237, 1317, 1518, 1729
HapII CCGG 3 cut(s) 739, 922, 965
HgaI GACGC 1 cut(s) 881
Hin1I GRCGYC 1 cut(s) 873
HindIII AAGCTT 1 cut(s) 698
HinfI GANTC 7 cut(s) 235, 794, 804, 917, 1021, 1080, 1198
HpaII CCGG 3 cut(s) 739, 922, 965
HphI GGTGA 6 cut(s) 1078, 1262, 1298, 1594, 1649, 1737
Hpy166II GTNNAC 4 cut(s) 793, 827, 962, 1552
Hpy188I TCNGA 7 cut(s) 54, 916, 936, 1137, 1374, 1530, 1681
Hpy188III TCNNGA 5 cut(s) 503, 801, 824, 1073, 1581
Hpy8I GTNNAC 4 cut(s) 793, 827, 962, 1552
Hpy99I CGWCG 1 cut(s) 936
HpyAV CCTTC 7 cut(s) 461, 614, 652, 887, 1156, 1161, 1718
HpyCH4III ACNGT 2 cut(s) 149, 1033
HpyCH4IV ACGT 2 cut(s) 1576, 1597
HpyCH4V TGCA 9 cut(s) 152, 260, 308, 1005, 1044, 1258, 1295, 1414, 1424
HpyF10VI GCNNNNNNNGC 7 cut(s) 266, 383, 863, 872, 1011, 1682, 1722
HpyF3I CTNAG 5 cut(s) 53, 647, 909, 1183, 1658
HpySE526I ACGT 2 cut(s) 1576, 1597
Hsp92I GRCGYC 1 cut(s) 873
KpnI GGTACC 1 cut(s) 1474
Ksp22I TGATCA 1 cut(s) 297
Kzo9I GATC 7 cut(s) 252, 297, 346, 378, 411, 610, 938
LmnI GCTCC 4 cut(s) 102, 274, 854, 1132
Lsp1109I GCAGC 1 cut(s) 232
LweI GCATC 5 cut(s) 658, 1100, 1321, 1365, 1672
MaeI CTAG 5 cut(s) 416, 672, 801, 1131, 1509
MaeII ACGT 2 cut(s) 1576, 1597
MaeIII GTNAC 4 cut(s) 1022, 1158, 1600, 1743
MalI GATC 7 cut(s) 254, 299, 348, 380, 413, 612, 940
MboI GATC 7 cut(s) 252, 297, 346, 378, 411, 610, 938
MboII GAAGA 9 cut(s) 173, 213, 500, 789, 789, 851, 854, 857, 1497
MfeI CAATTG 2 cut(s) 213, 288
MflI RGATCY 3 cut(s) 346, 610, 938
MhlI GDGCHC 2 cut(s) 132, 1659
MlsI TGGCCA 2 cut(s) 1237, 1729
MluNI TGGCCA 2 cut(s) 1237, 1729
MlyI GAGTC 3 cut(s) 788, 1030, 1089
MmeI TCCRAC 6 cut(s) 34, 249, 894, 914, 1476, 1675
Mox20I TGGCCA 2 cut(s) 1237, 1729
Mph1103I ATGCAT 1 cut(s) 1426
MscI TGGCCA 2 cut(s) 1237, 1729
MseI TTAA 4 cut(s) 33, 60, 1326, 1368
MslI CAYNNNNRTG 3 cut(s) 602, 1343, 1409
Msp20I TGGCCA 2 cut(s) 1237, 1729
MspA1I CMGCKG 1 cut(s) 362
MspI CCGG 3 cut(s) 739, 922, 965
MspR9I CCNGG 8 cut(s) 242, 343, 461, 831, 922, 966, 1352, 1467
MunI CAATTG 2 cut(s) 213, 288
MvaI CCWGG 6 cut(s) 242, 343, 461, 831, 1352, 1467
MwoI GCNNNNNNNGC 7 cut(s) 266, 383, 863, 872, 1011, 1682, 1722
NciI CCSGG 2 cut(s) 922, 966
NcoI CCATGG 2 cut(s) 428, 1434
NdeII GATC 7 cut(s) 252, 297, 346, 378, 411, 610, 938
NlaIV GGNNCC 5 cut(s) 356, 612, 1356, 1472, 1563
NmuCI GTSAC 4 cut(s) 1022, 1158, 1600, 1743
NsiI ATGCAT 1 cut(s) 1426
NspI RCATGY 2 cut(s) 1348, 1550
PagI TCATGA 1 cut(s) 502
PasI CCCWGGG 1 cut(s) 1466
PciI ACATGT 2 cut(s) 1344, 1546
PfeI GAWTC 4 cut(s) 235, 804, 917, 1198
PflFI GACNNNGTC 2 cut(s) 783, 1079
PflMI CCANNNNNTGG 1 cut(s) 1405
PkrI GCNGC 1 cut(s) 247
PleI GAGTC 3 cut(s) 788, 1029, 1088
PpsI GAGTC 3 cut(s) 788, 1029, 1088
PscI ACATGT 2 cut(s) 1344, 1546
PshBI ATTAAT 1 cut(s) 33
Psp124BI GAGCTC 2 cut(s) 132, 1659
Psp6I CCWGG 6 cut(s) 240, 341, 459, 829, 1350, 1465
PspEI GGTNACC 1 cut(s) 1743
PspGI CCWGG 6 cut(s) 240, 341, 459, 829, 1350, 1465
PspN4I GGNNCC 5 cut(s) 356, 612, 1356, 1472, 1563
PspPI GGNCC 6 cut(s) 432, 959, 990, 1316, 1517, 1562
PsuI RGATCY 3 cut(s) 346, 610, 938
PsyI GACNNNGTC 2 cut(s) 783, 1079
RsaI GTAC 5 cut(s) 634, 743, 836, 1263, 1472
RsaNI GTAC 5 cut(s) 633, 742, 835, 1262, 1471
RseI CAYNNNNRTG 3 cut(s) 602, 1343, 1409
SacI GAGCTC 2 cut(s) 132, 1659
SaqAI TTAA 4 cut(s) 33, 60, 1326, 1368
SatI GCNGC 1 cut(s) 246
Sau3AI GATC 7 cut(s) 252, 297, 346, 378, 411, 610, 938
Sau96I GGNCC 6 cut(s) 432, 959, 990, 1316, 1517, 1562
SchI GAGTC 3 cut(s) 788, 1030, 1089
ScrFI CCNGG 8 cut(s) 242, 343, 461, 831, 922, 966, 1352, 1467
SduI GDGCHC 2 cut(s) 132, 1659
SfaNI GCATC 5 cut(s) 658, 1100, 1321, 1365, 1672
SinI GGWCC 3 cut(s) 432, 959, 1562
SmiMI CAYNNNNRTG 3 cut(s) 602, 1343, 1409
SmlI CTYRAG 2 cut(s) 1009, 1663
SmoI CTYRAG 2 cut(s) 1009, 1663
SsiI CCGC 3 cut(s) 360, 1089, 1716
SspMI CTAG 5 cut(s) 416, 672, 801, 1131, 1509
SstI GAGCTC 2 cut(s) 132, 1659
StyD4I CCNGG 8 cut(s) 240, 341, 459, 829, 920, 964, 1350, 1465
StyI CCWWGG 3 cut(s) 428, 1434, 1513
TaaI ACNGT 2 cut(s) 149, 1033
TaiI ACGT 2 cut(s) 1579, 1600
TfiI GAWTC 4 cut(s) 235, 804, 917, 1198
Tru1I TTAA 4 cut(s) 33, 60, 1326, 1368
Tru9I TTAA 4 cut(s) 33, 60, 1326, 1368
TscAI CASTG 2 cut(s) 388, 1051
TseFI GTSAC 4 cut(s) 1022, 1158, 1600, 1743
TseI GCWGC 1 cut(s) 245
Tsp45I GTSAC 4 cut(s) 1022, 1158, 1600, 1743
TspDTI ATGAA 6 cut(s) 19, 408, 443, 519, 586, 850
TspRI CASTG 2 cut(s) 388, 1051
Tth111I GACNNNGTC 2 cut(s) 783, 1079
Van91I CCANNNNNTGG 1 cut(s) 1405
VpaK11BI GGWCC 3 cut(s) 432, 959, 1562
VspI ATTAAT 1 cut(s) 33
XapI RAATTY 3 cut(s) 734, 758, 1228
XbaI TCTAGA 1 cut(s) 800
XceI RCATGY 2 cut(s) 1348, 1550
XspI CTAG 5 cut(s) 416, 672, 801, 1131, 1509
Zsp2I ATGCAT 1 cut(s) 1426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.