RLG00000018615

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000073
Physical Location & Seq
Reverse (-)
32753057 .. 32754848
1792 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018615

Sequence Viewer

Length: 1350 bp
ATGGGATCTCATGATCATCTTGCATCCCTTCTGGAGGATTCGCTACACTTTGATGAGTTGAGTGATGCCAAGATTCTTTTGGGGGCCATTATTGCCGACAAACTCCCAAATATTGTCGACCTTGATGGTGCCAAACACATACTTGAAGATGGCCCATGGCATGTAAAAAACCTTTGTTTCAATGTGGTTCAGCGGTTGGGGAACATGACAATTGATGAGGTTCCTGTCCATATGGTATCATATTGGGTCCAAATTACTGGGCTCACTCTGGAGAAGATGAATATGAAGAATGCCAGACTCCTCGTCTCAGAGATTGGGAAGATTATTGAGATTAATGATCTGGAGAAAGTTGATGCTGTAGTGAGAGTCATGTACATCTATGAGGATCTTCTTGACTTCTGTTATGGATGCGCTCCCAGATTCTCCAAGCCAAACCCATTCGACCAGCCTGCACCAGTTCACAGGAAAAAACCTCCAACCCTAAGGTCCACCTCGACTGATGAGTTGATTGACGTCGACCATGCAATCACTGTTTCAAATTTGAAATCACATGTTGGCAACTCCAGCTCTTCCACTACAAAATCTCTATCCTGTGCCAGATCAGCCGACCCATCTATTAGGCCTAATGACTCCCCAAGCCGACATGATTATCGACTGTCAGTCACTATAGCTACCCATATGCAGTGGACCCATAAATCCACTATCTTCACCCATGAAAGGCCCAACCAACAACTCCCGAGCAATTGTCTAGTCCCAACCCACTCTCTTTCTAAGGTCTCAAATGTCTCGATTGTGAAACCCTACCATCACAGACAAGCTAACCTTGTTCTCTTGGGCAAACCTACCTACTCCTTGCCTCAAATTGCCCATCCTTGCTACCCAATGGTCCTAACCTGCTTAGTTCCATCTCTGCCTAAACCAACAGATAAGGGAAAGGAACTCTTGTGCATCACTTCTCCCACATTTACACAAAAGCAATTCAGGTGTATTGCACCATCCCCTTTTCGCATCCCAAACAACCCACCGTCTCCACCGCTACCACAAATTGACAACTCCCACACCACAAATGACCAAATATTCCCAACCTTCCCAGATCCAGACCCAAACCTAACCATCCCTCTTCAAAGGAAGAGACATCTCAAACTGATATGGCAGCTACCTTGCTTCGATACACCAAATCCAGAGGTGGGGGATGAAATGGTAGAGGTCAAAGGGGTGGTAGACGTGGAGGCAGCCATGGTAGAGGTTGAGCTAACAGTGCTGGAAGGAAATGAAGTAAAAGCAAACAGACCAGACAGGTTGGTAGTTTTCCCAATATTGATCTTAATCCTGGAGAATTCCAAGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4 zf-RING_2

Protein Analysis

450

Amino Acids

50.27

Weight (kDa)

6.44

Isoelectric Point (pI)

38.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 516
Acc36I ACCTGC 1 cut(s) 902
AccB1I GGYRCC 1 cut(s) 128
AccI GTMKAC 3 cut(s) 117, 516, 1221
AciI CCGC 2 cut(s) 193, 1034
AclWI GGATC 3 cut(s) 13, 393, 1088
AcsI RAATTY 2 cut(s) 538, 1336
AcyI GRCGYC 1 cut(s) 513
AfaI GTAC 1 cut(s) 374
AfiI CCNNNNNNNGG 3 cut(s) 34, 717, 1187
AflIII ACRYGT 1 cut(s) 550
AgsI TTSAA 5 cut(s) 146, 181, 537, 544, 1124
AhdI GACNNNNNGTC 2 cut(s) 302, 659
AjiI CACGTC 1 cut(s) 1225
AjnI CCWGG 1 cut(s) 1329
AluBI AGCT 5 cut(s) 567, 671, 818, 1156, 1252
AluI AGCT 5 cut(s) 567, 671, 818, 1156, 1252
Alw26I GTCTC 5 cut(s) 310, 781, 790, 1032, 1126
AlwI GGATC 3 cut(s) 13, 393, 1088
Ama87I CYCGRG 1 cut(s) 736
AoxI GGCC 4 cut(s) 84, 151, 620, 719
ApeKI GCWGC 2 cut(s) 1153, 1232
ApoI RAATTY 2 cut(s) 538, 1336
AseI ATTAAT 1 cut(s) 333
AspLEI GCGC 1 cut(s) 413
AspS9I GGNCC 7 cut(s) 84, 152, 247, 486, 687, 720, 886
AsuHPI GGTGA 1 cut(s) 700
AvaI CYCGRG 1 cut(s) 736
AvaII GGWCC 4 cut(s) 247, 486, 687, 886
AxyI CCTNAGG 1 cut(s) 482
BanI GGYRCC 1 cut(s) 128
BanII GRGCYC 1 cut(s) 264
BbvI GCAGC 2 cut(s) 1165, 1244
BccI CCATC 8 cut(s) 119, 143, 619, 813, 876, 913, 1003, 1121
BcgI CGANNNNNNTGC 2 cut(s) 431, 465
BciT130I CCWGG 1 cut(s) 1331
BclI TGATCA 1 cut(s) 13
BcoDI GTCTC 5 cut(s) 310, 781, 790, 1032, 1126
BfaI CTAG 1 cut(s) 749
BfmI CTRYAG 2 cut(s) 357, 666
BfuAI ACCTGC 1 cut(s) 902
BisI GCNGC 2 cut(s) 1154, 1233
BlsI GCNGC 2 cut(s) 1155, 1234
Bme1390I CCNGG 1 cut(s) 1331
Bme18I GGWCC 4 cut(s) 247, 486, 687, 886
BmeRI GACNNNNNGTC 2 cut(s) 302, 659
BmeT110I CYCGRG 1 cut(s) 736
BmgBI CACGTC 1 cut(s) 1225
BmgT120I GGNCC 7 cut(s) 84, 152, 247, 486, 687, 720, 886
BmiI GGNNCC 5 cut(s) 85, 130, 222, 248, 689
BmrFI CCNGG 1 cut(s) 1331
BmrI ACTGGG 1 cut(s) 267
BmsI GCATC 6 cut(s) 32, 55, 343, 398, 957, 1017
BmuI ACTGGG 1 cut(s) 267
BpmI CTGGAG 4 cut(s) 53, 290, 362, 547
BsaBI GATNNNNATC 1 cut(s) 1325
BsaHI GRCGYC 1 cut(s) 513
BsaI GGTCTC 1 cut(s) 781
BsaJI CCNNGG 2 cut(s) 155, 1236
Bsc4I CCNNNNNNNGG 3 cut(s) 34, 717, 1187
Bse1I ACTGG 2 cut(s) 262, 455
Bse21I CCTNAGG 1 cut(s) 482
Bse8I GATNNNNATC 1 cut(s) 1325
BseBI CCWGG 1 cut(s) 1331
BseDI CCNNGG 2 cut(s) 155, 1236
BseGI GGATG 7 cut(s) 23, 413, 868, 995, 1008, 1113, 1198
BseJI GATNNNNATC 1 cut(s) 1325
BseLI CCNNNNNNNGG 3 cut(s) 34, 717, 1187
BseMII CTCAG 1 cut(s) 321
BseNI ACTGG 2 cut(s) 262, 455
BseRI GAGGAG 1 cut(s) 290
BseXI GCAGC 2 cut(s) 1165, 1244
BsgI GTGCAG 1 cut(s) 435
BshFI GGCC 4 cut(s) 86, 153, 622, 721
BshNI GGYRCC 1 cut(s) 128
BsiHKCI CYCGRG 1 cut(s) 736
BslFI GGGAC 1 cut(s) 737
BslI CCNNNNNNNGG 3 cut(s) 34, 717, 1187
BsmAI GTCTC 5 cut(s) 310, 781, 790, 1032, 1126
BsmBI CGTCTC 2 cut(s) 310, 1032
BsmFI GGGAC 1 cut(s) 737
BsmI GAATGC 1 cut(s) 295
BsnI GGCC 4 cut(s) 86, 153, 622, 721
Bso31I GGTCTC 1 cut(s) 781
BsoBI CYCGRG 1 cut(s) 736
Bsp1286I GDGCHC 1 cut(s) 264
Bsp1407I TGTACA 1 cut(s) 372
Bsp143I GATC 7 cut(s) 5, 13, 337, 385, 599, 1093, 1320
Bsp19I CCATGG 2 cut(s) 155, 1236
BspACI CCGC 2 cut(s) 193, 1034
BspANI GGCC 4 cut(s) 86, 153, 622, 721
BspCNI CTCAG 1 cut(s) 320
BspHI TCATGA 1 cut(s) 10
BspLI GGNNCC 5 cut(s) 85, 130, 222, 248, 689
BspMI ACCTGC 1 cut(s) 902
BspPI GGATC 3 cut(s) 13, 393, 1088
BspQI GCTCTTC 1 cut(s) 574
BspT107I GGYRCC 1 cut(s) 128
BspTNI GGTCTC 1 cut(s) 781
BsrGI TGTACA 1 cut(s) 372
BsrI ACTGG 2 cut(s) 262, 455
BssECI CCNNGG 2 cut(s) 155, 1236
BssMI GATC 7 cut(s) 5, 13, 337, 385, 599, 1093, 1320
BssNI GRCGYC 1 cut(s) 513
BssT1I CCWWGG 2 cut(s) 155, 1236
Bst2UI CCWGG 1 cut(s) 1331
Bst4CI ACNGT 4 cut(s) 532, 657, 1026, 1258
Bst6I CTCTTC 3 cut(s) 574, 1124, 1125
BstACI GRCGYC 1 cut(s) 513
BstAUI TGTACA 1 cut(s) 372
BstC8I GCNNGC 1 cut(s) 450
BstDEI CTNAG 4 cut(s) 307, 482, 771, 898
BstDSI CCRYGG 2 cut(s) 155, 1236
BstENI CCTNNNNNAGG 1 cut(s) 32
BstF5I GGATG 7 cut(s) 23, 413, 868, 995, 1008, 1113, 1198
BstHHI GCGC 1 cut(s) 413
BstKTI GATC 7 cut(s) 8, 16, 340, 388, 602, 1096, 1323
BstMAI GTCTC 5 cut(s) 310, 781, 790, 1032, 1126
BstMBI GATC 7 cut(s) 5, 13, 337, 385, 599, 1093, 1320
BstMWI GCNNNNNNNGC 4 cut(s) 92, 564, 602, 1258
BstNI CCWGG 1 cut(s) 1331
BstNSI RCATGY 2 cut(s) 164, 554
BstSCI CCNGG 1 cut(s) 1329
BstSFI CTRYAG 2 cut(s) 357, 666
BstV1I GCAGC 2 cut(s) 1165, 1244
BstX2I RGATCY 3 cut(s) 5, 385, 1093
BstXI CCANNNNNNTGG 1 cut(s) 257
BstYI RGATCY 3 cut(s) 5, 385, 1093
Bsu36I CCTNAGG 1 cut(s) 482
BsuRI GGCC 4 cut(s) 86, 153, 622, 721
BtgI CCRYGG 2 cut(s) 155, 1236
BtrI CACGTC 1 cut(s) 1225
BtsCI GGATG 7 cut(s) 23, 413, 868, 995, 1008, 1113, 1198
BtsI GCAGTG 1 cut(s) 689
BtsIMutI CAGTG 3 cut(s) 528, 689, 1263
BveI ACCTGC 1 cut(s) 902
Cac8I GCNNGC 1 cut(s) 450
CciI TCATGA 1 cut(s) 10
CfoI GCGC 1 cut(s) 413
Cfr13I GGNCC 7 cut(s) 84, 152, 247, 486, 687, 720, 886
Csp6I GTAC 1 cut(s) 373
CviQI GTAC 1 cut(s) 373
DdeI CTNAG 4 cut(s) 307, 482, 771, 898
DpnI GATC 7 cut(s) 7, 15, 339, 387, 601, 1095, 1322
DpnII GATC 7 cut(s) 5, 13, 337, 385, 599, 1093, 1320
DriI GACNNNNNGTC 2 cut(s) 302, 659
Eam1104I CTCTTC 3 cut(s) 574, 1124, 1125
Eam1105I GACNNNNNGTC 2 cut(s) 302, 659
EarI CTCTTC 3 cut(s) 574, 1124, 1125
Eco130I CCWWGG 2 cut(s) 155, 1236
Eco147I AGGCCT 1 cut(s) 622
Eco24I GRGCYC 1 cut(s) 264
Eco31I GGTCTC 1 cut(s) 781
Eco47I GGWCC 4 cut(s) 247, 486, 687, 886
Eco81I CCTNAGG 1 cut(s) 482
Eco88I CYCGRG 1 cut(s) 736
EcoNI CCTNNNNNAGG 1 cut(s) 32
EcoRI GAATTC 1 cut(s) 1336
EcoRII CCWGG 1 cut(s) 1329
EcoT14I CCWWGG 2 cut(s) 155, 1236
EcoT38I GRGCYC 1 cut(s) 264
ErhI CCWWGG 2 cut(s) 155, 1236
Esp3I CGTCTC 2 cut(s) 310, 1032
FalI AAGNNNNNCTT 4 cut(s) 807, 839, 926, 958
FaqI GGGAC 1 cut(s) 737
FauNDI CATATG 2 cut(s) 231, 678
FbaI TGATCA 1 cut(s) 13
FblI GTMKAC 3 cut(s) 117, 516, 1221
Fnu4HI GCNGC 2 cut(s) 1154, 1233
FokI GGATG 7 cut(s) 10, 420, 855, 982, 995, 1100, 1205
FriOI GRGCYC 1 cut(s) 264
Fsp4HI GCNGC 2 cut(s) 1154, 1233
FspBI CTAG 1 cut(s) 749
GlaI GCGC 1 cut(s) 412
GluI GCNGC 2 cut(s) 1154, 1233
GsuI CTGGAG 4 cut(s) 53, 290, 362, 547
HaeIII GGCC 4 cut(s) 86, 153, 622, 721
HhaI GCGC 1 cut(s) 413
Hin1I GRCGYC 1 cut(s) 513
Hin6I GCGC 1 cut(s) 411
HinP1I GCGC 1 cut(s) 411
HincII GTYRAC 2 cut(s) 118, 517
HindII GTYRAC 2 cut(s) 118, 517
HinfI GANTC 6 cut(s) 38, 73, 297, 366, 420, 629
HphI GGTGA 1 cut(s) 700
Hpy166II GTNNAC 6 cut(s) 118, 460, 489, 517, 687, 1222
Hpy188I TCNGA 1 cut(s) 310
Hpy188III TCNNGA 9 cut(s) 11, 32, 269, 341, 392, 736, 787, 1097, 1181
Hpy8I GTNNAC 6 cut(s) 118, 460, 489, 517, 687, 1222
Hpy99I CGWCG 1 cut(s) 518
HpyAV CCTTC 3 cut(s) 38, 1096, 1259
HpyCH4III ACNGT 4 cut(s) 532, 657, 1026, 1258
HpyCH4IV ACGT 2 cut(s) 513, 1224
HpyCH4V TGCA 6 cut(s) 23, 452, 524, 682, 948, 992
HpyF10VI GCNNNNNNNGC 4 cut(s) 92, 564, 602, 1258
HpyF3I CTNAG 4 cut(s) 307, 482, 771, 898
HpySE526I ACGT 2 cut(s) 513, 1224
Hsp92I GRCGYC 1 cut(s) 513
HspAI GCGC 1 cut(s) 411
Ksp22I TGATCA 1 cut(s) 13
Kzo9I GATC 7 cut(s) 5, 13, 337, 385, 599, 1093, 1320
LguI GCTCTTC 1 cut(s) 574
LmnI GCTCC 1 cut(s) 418
Lsp1109I GCAGC 2 cut(s) 1165, 1244
LweI GCATC 6 cut(s) 32, 55, 343, 398, 957, 1017
MaeI CTAG 1 cut(s) 749
MaeII ACGT 2 cut(s) 513, 1224
MaeIII GTNAC 1 cut(s) 661
MalI GATC 7 cut(s) 7, 15, 339, 387, 601, 1095, 1322
MboI GATC 7 cut(s) 5, 13, 337, 385, 599, 1093, 1320
MboII GAAGA 9 cut(s) 158, 286, 298, 331, 380, 561, 697, 1112, 1141
MfeI CAATTG 2 cut(s) 210, 742
MflI RGATCY 3 cut(s) 5, 385, 1093
MhlI GDGCHC 1 cut(s) 264
MluCI AATT 8 cut(s) 210, 252, 538, 742, 861, 977, 1044, 1336
MlyI GAGTC 3 cut(s) 291, 375, 623
MmeI TCCRAC 1 cut(s) 500
MseI TTAA 2 cut(s) 333, 1325
MslI CAYNNNNRTG 1 cut(s) 51
MspA1I CMGCKG 1 cut(s) 193
MspR9I CCNGG 1 cut(s) 1331
MunI CAATTG 2 cut(s) 210, 742
Mva1269I GAATGC 1 cut(s) 295
MvaI CCWGG 1 cut(s) 1331
MwoI GCNNNNNNNGC 4 cut(s) 92, 564, 602, 1258
NcoI CCATGG 2 cut(s) 155, 1236
NdeI CATATG 2 cut(s) 231, 678
NdeII GATC 7 cut(s) 5, 13, 337, 385, 599, 1093, 1320
NlaIV GGNNCC 5 cut(s) 85, 130, 222, 248, 689
NmuCI GTSAC 1 cut(s) 661
NspI RCATGY 2 cut(s) 164, 554
PagI TCATGA 1 cut(s) 10
PceI AGGCCT 1 cut(s) 622
PciI ACATGT 1 cut(s) 550
PciSI GCTCTTC 1 cut(s) 574
PctI GAATGC 1 cut(s) 295
PfeI GAWTC 3 cut(s) 38, 73, 420
PfoI TCCNGGA 1 cut(s) 1329
PkrI GCNGC 2 cut(s) 1155, 1234
PleI GAGTC 3 cut(s) 291, 374, 623
PpsI GAGTC 3 cut(s) 291, 374, 623
PscI ACATGT 1 cut(s) 550
PshBI ATTAAT 1 cut(s) 333
Psp6I CCWGG 1 cut(s) 1329
PspGI CCWGG 1 cut(s) 1329
PspN4I GGNNCC 5 cut(s) 85, 130, 222, 248, 689
PspPI GGNCC 7 cut(s) 84, 152, 247, 486, 687, 720, 886
PsuI RGATCY 3 cut(s) 5, 385, 1093
RsaI GTAC 1 cut(s) 374
RsaNI GTAC 1 cut(s) 373
RseI CAYNNNNRTG 1 cut(s) 51
SalI GTCGAC 2 cut(s) 116, 515
SapI GCTCTTC 1 cut(s) 574
SaqAI TTAA 2 cut(s) 333, 1325
SatI GCNGC 2 cut(s) 1154, 1233
Sau3AI GATC 7 cut(s) 5, 13, 337, 385, 599, 1093, 1320
Sau96I GGNCC 7 cut(s) 84, 152, 247, 486, 687, 720, 886
SchI GAGTC 3 cut(s) 291, 375, 623
ScrFI CCNGG 1 cut(s) 1331
SduI GDGCHC 1 cut(s) 264
SfaNI GCATC 6 cut(s) 32, 55, 343, 398, 957, 1017
SfcI CTRYAG 2 cut(s) 357, 666
SinI GGWCC 4 cut(s) 247, 486, 687, 886
SmiMI CAYNNNNRTG 1 cut(s) 51
Sse9I AATT 8 cut(s) 210, 252, 538, 742, 861, 977, 1044, 1336
SseBI AGGCCT 1 cut(s) 622
SsiI CCGC 2 cut(s) 193, 1034
SspI AATATT 3 cut(s) 112, 1077, 1317
SspMI CTAG 1 cut(s) 749
StuI AGGCCT 1 cut(s) 622
StyD4I CCNGG 1 cut(s) 1329
StyI CCWWGG 2 cut(s) 155, 1236
TaaI ACNGT 4 cut(s) 532, 657, 1026, 1258
TaiI ACGT 2 cut(s) 516, 1227
TaqI TCGA 7 cut(s) 117, 441, 494, 516, 652, 788, 1167
TasI AATT 8 cut(s) 210, 252, 538, 742, 861, 977, 1044, 1336
TatI WGTACW 1 cut(s) 372
TfiI GAWTC 3 cut(s) 38, 73, 420
Tru1I TTAA 2 cut(s) 333, 1325
Tru9I TTAA 2 cut(s) 333, 1325
TscAI CASTG 3 cut(s) 535, 689, 1263
TseFI GTSAC 1 cut(s) 661
TseI GCWGC 2 cut(s) 1153, 1232
Tsp45I GTSAC 1 cut(s) 661
TspDTI ATGAA 5 cut(s) 293, 299, 729, 1209, 1287
TspRI CASTG 3 cut(s) 535, 689, 1263
VpaK11BI GGWCC 4 cut(s) 247, 486, 687, 886
VspI ATTAAT 1 cut(s) 333
XagI CCTNNNNNAGG 1 cut(s) 32
XapI RAATTY 2 cut(s) 538, 1336
XceI RCATGY 2 cut(s) 164, 554
XcmI CCANNNNNNNNNTGG 1 cut(s) 76
XmiI GTMKAC 3 cut(s) 117, 516, 1221
XspI CTAG 1 cut(s) 749
ZraI GACGTC 1 cut(s) 514
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.