RLG00000035677

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000073
Physical Location & Seq
Forward (+)
70142287 .. 70143381
1095 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035677

Sequence Viewer

Length: 1095 bp
ATGCCTCCCCATGACAATCTAGCCTCCAGACTGGAAAATACTTGTTGTCTGGACGAGGTTGAAAATGAAGTCTCTCTCCTAGGAGCAATAATTGCAGATGTTGTTCCAAATATTGGTGGAATCAAGGGAGCTCTACGTAGTGCATGGAAGGACGTTGGAAGCTTCAAGATAGCACATATTCACCACAACGTCTTCTCCATCAAGATCACCCCCGTGGGAGCTACCACACTACTTGAAGGGGGACCTTGGCATGTGGAGAACATAAGATTTAATGTGGTACGTTGGCTACCCAATCTTACAATTAGTGATGTTCATTTTCACAAAGTCTGGTATTGGGTCCAAATTTCTGGCCTCACGTGGGAAAAGATGAACTCCAAAAACACTGCGACGATTGGCGCTGAGATTGGCACTGTCTTGGAGCTGGAAGATCCGGCGATGGTCTACTTGACTCTTAGAGGTTTTCTGAGAGTCAAAGTTTTGCTTGACTCCAGGAACCCATTACCAACGGGTTTTTGGTTGCCCCTCAATGAGTTTACAAGCACAAGGGTCGATTACTCCTATGAGGGCCTATGTGATTTTTGCTACAAGTGTGGCAGATTAGGGCACCACATGGACGTCTGCAAAAACTACAGACTCATTAACCTGGATGATGAGGAGCAAGAGAACCTCTGGTACGGCCCATGGATGAAGAAAAAATCCTTCACGAAGAAACAGCAGTCCTGGCTTGACCGGCCGAGGGTCAACAGAAGGAAACCCAAGACCAGGCGGTACACAGAGTCGGCTCACACCTCCCAAGATGCCTCACAGATGAGTCTTAATCAACCTCGAAGCTTGAGTGCTGTTTTAACGTTGGCAGACACTGACGGGACCTCTCCTTTCATTACCGAGCCGGGTGAAGATGACAGGTTCGAGGAGATTTCAAATGTTGAGGATCTCCCCGTGATGGCTCAAAACCCCAGCTTGTGCTATCCTCCTGACAAGGTTTCAACTCTGGAACCAATGCAGCAGATCAATCCCTTTCCAAGCCCTCATTGGCTGAAGTTAGCGGTCACCACCACAAAAACCCATGTGGAATGGGCCAAAAAAGTTGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4 zf-RING_2

Protein Analysis

365

Amino Acids

41.48

Weight (kDa)

6.47

Isoelectric Point (pI)

44.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 21 - 100 5.3e-08 Domain of unknown function (DUF4283)
zf-CCHC_4 PF14392 181 - 208 5.5e-06 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 618
AccB1I GGYRCC 1 cut(s) 603
AccB7I CCANNNNNTGG 1 cut(s) 113
AccI GTMKAC 1 cut(s) 441
AciI CCGC 2 cut(s) 766, 1046
AclI AACGTT 1 cut(s) 848
AclWI GGATC 2 cut(s) 422, 939
AcoI YGGCCR 1 cut(s) 731
AcsI RAATTY 1 cut(s) 342
AcuI CTGAAG 1 cut(s) 1058
AcvI CACGTG 1 cut(s) 357
AcyI GRCGYC 1 cut(s) 615
AfaI GTAC 3 cut(s) 279, 674, 770
AfiI CCNNNNNNNGG 5 cut(s) 113, 358, 736, 762, 943
AgsI TTSAA 5 cut(s) 62, 166, 236, 921, 987
AjnI CCWGG 4 cut(s) 488, 642, 719, 761
AleI CACNNNNGTG 1 cut(s) 212
AluBI AGCT 6 cut(s) 131, 162, 221, 421, 831, 960
AluI AGCT 6 cut(s) 131, 162, 221, 421, 831, 960
Alw21I GWGCWC 1 cut(s) 133
Alw26I GTCTC 1 cut(s) 76
AlwI GGATC 2 cut(s) 422, 939
AlwNI CAGNNNCTG 1 cut(s) 860
AoxI GGCC 5 cut(s) 349, 565, 676, 731, 1077
ApeKI GCWGC 1 cut(s) 1003
ApoI RAATTY 1 cut(s) 342
ArsI GACNNNNNNTTYG 1 cut(s) 1074
AspA2I CCTAGG 1 cut(s) 79
AspLEI GCGC 1 cut(s) 398
AspS9I GGNCC 6 cut(s) 242, 337, 565, 677, 867, 1077
AsuC2I CCSGG 1 cut(s) 891
AsuHPI GGTGA 4 cut(s) 173, 199, 905, 1042
AvaII GGWCC 3 cut(s) 242, 337, 867
AvrII CCTAGG 1 cut(s) 79
BaeGI GKGCMC 1 cut(s) 606
BanI GGYRCC 1 cut(s) 603
BanII GRGCYC 1 cut(s) 133
BbrPI CACGTG 1 cut(s) 357
BbsI GAAGAC 1 cut(s) 184
Bbv12I GWGCWC 1 cut(s) 133
BbvI GCAGC 1 cut(s) 1015
BccI CCATC 3 cut(s) 206, 430, 937
BceAI ACGGC 1 cut(s) 691
BcgI CGANNNNNNTGC 2 cut(s) 529, 563
BciT130I CCWGG 4 cut(s) 490, 644, 721, 763
BcnI CCSGG 1 cut(s) 891
BcoDI GTCTC 1 cut(s) 76
BfaI CTAG 3 cut(s) 20, 80, 1093
BfmI CTRYAG 1 cut(s) 628
BfoI RGCGCY 1 cut(s) 399
BisI GCNGC 1 cut(s) 1004
BlnI CCTAGG 1 cut(s) 79
BlsI GCNGC 1 cut(s) 1005
Bme1390I CCNGG 5 cut(s) 490, 644, 721, 763, 891
Bme18I GGWCC 3 cut(s) 242, 337, 867
BmgT120I GGNCC 6 cut(s) 242, 337, 565, 677, 867, 1077
BmiI GGNNCC 6 cut(s) 243, 338, 494, 605, 868, 996
BmrFI CCNGG 5 cut(s) 490, 644, 721, 763, 891
BmsI GCATC 1 cut(s) 787
BpiI GAAGAC 1 cut(s) 184
BpmI CTGGAG 2 cut(s) 10, 472
BpuEI CTTGAG 1 cut(s) 853
BpuMI CCSGG 1 cut(s) 891
BsaAI YACGTR 2 cut(s) 137, 357
BsaHI GRCGYC 1 cut(s) 615
BsaJI CCNNGG 5 cut(s) 79, 213, 245, 680, 734
BsaXI ACNNNNNCTCC 2 cut(s) 179, 209
Bsc4I CCNNNNNNNGG 5 cut(s) 113, 358, 736, 762, 943
Bse118I RCCGGY 1 cut(s) 729
Bse1I ACTGG 1 cut(s) 36
BseBI CCWGG 4 cut(s) 490, 644, 721, 763
BseDI CCNNGG 5 cut(s) 79, 213, 245, 680, 734
BseGI GGATG 2 cut(s) 652, 690
BseLI CCNNNNNNNGG 5 cut(s) 113, 358, 736, 762, 943
BseMII CTCAG 2 cut(s) 390, 455
BseNI ACTGG 1 cut(s) 36
BseRI GAGGAG 2 cut(s) 668, 926
BseSI GKGCMC 1 cut(s) 606
BseX3I CGGCCG 1 cut(s) 731
BseXI GCAGC 1 cut(s) 1015
BseYI CCCAGC 1 cut(s) 956
Bsh1285I CGRYCG 1 cut(s) 734
BshFI GGCC 5 cut(s) 351, 567, 678, 733, 1079
BshNI GGYRCC 1 cut(s) 603
BsiEI CGRYCG 1 cut(s) 734
BsiHKAI GWGCWC 1 cut(s) 133
BsiSI CCGG 3 cut(s) 431, 730, 890
BslFI GGGAC 2 cut(s) 255, 880
BslI CCNNNNNNNGG 5 cut(s) 113, 358, 736, 762, 943
BsmAI GTCTC 1 cut(s) 76
BsmFI GGGAC 2 cut(s) 255, 880
BsnI GGCC 5 cut(s) 351, 567, 678, 733, 1079
Bsp1286I GDGCHC 2 cut(s) 133, 606
Bsp143I GATC 4 cut(s) 204, 427, 931, 1008
Bsp19I CCATGG 1 cut(s) 680
BspACI CCGC 2 cut(s) 766, 1046
BspANI GGCC 5 cut(s) 351, 567, 678, 733, 1079
BspCNI CTCAG 2 cut(s) 391, 456
BspLI GGNNCC 6 cut(s) 243, 338, 494, 605, 868, 996
BspPI GGATC 2 cut(s) 422, 939
BspT107I GGYRCC 1 cut(s) 603
BsrFI RCCGGY 1 cut(s) 729
BsrI ACTGG 1 cut(s) 36
BssAI RCCGGY 1 cut(s) 729
BssECI CCNNGG 5 cut(s) 79, 213, 245, 680, 734
BssMI GATC 4 cut(s) 204, 427, 931, 1008
BssNI GRCGYC 1 cut(s) 615
BssT1I CCWWGG 3 cut(s) 79, 245, 680
Bst2UI CCWGG 4 cut(s) 490, 644, 721, 763
Bst4CI ACNGT 1 cut(s) 412
BstACI GRCGYC 1 cut(s) 615
BstAPI GCANNNNNTGC 1 cut(s) 92
BstBAI YACGTR 2 cut(s) 137, 357
BstDEI CTNAG 3 cut(s) 399, 452, 464
BstDSI CCRYGG 2 cut(s) 213, 680
BstEII GGTNACC 1 cut(s) 1048
BstF5I GGATG 2 cut(s) 652, 690
BstH2I RGCGCY 1 cut(s) 399
BstHHI GCGC 1 cut(s) 398
BstKTI GATC 4 cut(s) 207, 430, 934, 1011
BstMAI GTCTC 1 cut(s) 76
BstMBI GATC 4 cut(s) 204, 427, 931, 1008
BstMCI CGRYCG 1 cut(s) 734
BstMWI GCNNNNNNNGC 3 cut(s) 92, 721, 730
BstNI CCWGG 4 cut(s) 490, 644, 721, 763
BstNSI RCATGY 1 cut(s) 254
BstPI GGTNACC 1 cut(s) 1048
BstSCI CCNGG 5 cut(s) 488, 642, 719, 761, 889
BstSFI CTRYAG 1 cut(s) 628
BstSLI GKGCMC 1 cut(s) 606
BstSNI TACGTA 1 cut(s) 137
BstV1I GCAGC 1 cut(s) 1015
BstV2I GAAGAC 1 cut(s) 184
BstX2I RGATCY 2 cut(s) 427, 931
BstXI CCANNNNNNTGG 1 cut(s) 347
BstYI RGATCY 2 cut(s) 427, 931
BstZI CGGCCG 1 cut(s) 731
BsuRI GGCC 5 cut(s) 351, 567, 678, 733, 1079
BtgI CCRYGG 2 cut(s) 213, 680
BtgZI GCGATG 1 cut(s) 449
BtsCI GGATG 2 cut(s) 652, 690
BtsI GCAGTG 1 cut(s) 381
BtsIMutI CAGTG 3 cut(s) 381, 408, 858
CaiI CAGNNNCTG 1 cut(s) 860
CfoI GCGC 1 cut(s) 398
Cfr10I RCCGGY 1 cut(s) 729
Cfr13I GGNCC 6 cut(s) 242, 337, 565, 677, 867, 1077
Csp6I GTAC 3 cut(s) 278, 673, 769
CspCI CAANNNNNGTGG 2 cut(s) 214, 249
CviAII CATG 6 cut(s) 11, 144, 251, 610, 681, 1067
CviQI GTAC 3 cut(s) 278, 673, 769
DdeI CTNAG 3 cut(s) 399, 452, 464
DpnI GATC 4 cut(s) 206, 429, 933, 1010
DpnII GATC 4 cut(s) 204, 427, 931, 1008
EaeI YGGCCR 1 cut(s) 731
EagI CGGCCG 1 cut(s) 731
Ecl136II GAGCTC 1 cut(s) 131
EclXI CGGCCG 1 cut(s) 731
Eco105I TACGTA 1 cut(s) 137
Eco130I CCWWGG 3 cut(s) 79, 245, 680
Eco24I GRGCYC 1 cut(s) 133
Eco47I GGWCC 3 cut(s) 242, 337, 867
Eco52I CGGCCG 1 cut(s) 731
Eco53kI GAGCTC 1 cut(s) 131
Eco57I CTGAAG 1 cut(s) 1058
Eco72I CACGTG 1 cut(s) 357
Eco91I GGTNACC 1 cut(s) 1048
EcoICRI GAGCTC 1 cut(s) 131
EcoO109I RGGNCCY 3 cut(s) 242, 565, 867
EcoO65I GGTNACC 1 cut(s) 1048
EcoRII CCWGG 4 cut(s) 488, 642, 719, 761
EcoT14I CCWWGG 3 cut(s) 79, 245, 680
EcoT38I GRGCYC 1 cut(s) 133
ErhI CCWWGG 3 cut(s) 79, 245, 680
FaeI CATG 6 cut(s) 14, 147, 254, 613, 684, 1070
FalI AAGNNNNNCTT 2 cut(s) 465, 497
FaqI GGGAC 2 cut(s) 255, 880
FatI CATG 6 cut(s) 10, 143, 250, 609, 680, 1066
FblI GTMKAC 1 cut(s) 441
Fnu4HI GCNGC 1 cut(s) 1004
FokI GGATG 2 cut(s) 659, 697
FriOI GRGCYC 1 cut(s) 133
Fsp4HI GCNGC 1 cut(s) 1004
FspBI CTAG 3 cut(s) 20, 80, 1093
GlaI GCGC 1 cut(s) 397
GluI GCNGC 1 cut(s) 1004
GsaI CCCAGC 1 cut(s) 960
GsuI CTGGAG 2 cut(s) 10, 472
HaeII RGCGCY 1 cut(s) 399
HaeIII GGCC 5 cut(s) 351, 567, 678, 733, 1079
HapII CCGG 3 cut(s) 431, 730, 890
HhaI GCGC 1 cut(s) 398
Hin1I GRCGYC 1 cut(s) 615
Hin1II CATG 6 cut(s) 14, 147, 254, 613, 684, 1070
Hin6I GCGC 1 cut(s) 396
HinP1I GCGC 1 cut(s) 396
HincII GTYRAC 1 cut(s) 742
HindII GTYRAC 1 cut(s) 742
HindIII AAGCTT 2 cut(s) 160, 829
HinfI GANTC 7 cut(s) 120, 448, 468, 485, 633, 776, 811
HpaII CCGG 3 cut(s) 431, 730, 890
HphI GGTGA 4 cut(s) 173, 199, 905, 1042
Hpy166II GTNNAC 4 cut(s) 442, 534, 742, 771
Hpy188I TCNGA 1 cut(s) 465
Hpy188III TCNNGA 7 cut(s) 27, 50, 166, 202, 703, 974, 992
Hpy8I GTNNAC 4 cut(s) 442, 534, 742, 771
Hpy99I CGWCG 1 cut(s) 391
HpyAV CCTTC 4 cut(s) 142, 230, 709, 741
HpyCH4III ACNGT 1 cut(s) 412
HpyCH4IV ACGT 7 cut(s) 136, 153, 189, 280, 356, 615, 848
HpyCH4V TGCA 4 cut(s) 95, 143, 621, 1003
HpyF10VI GCNNNNNNNGC 3 cut(s) 92, 721, 730
HpyF3I CTNAG 3 cut(s) 399, 452, 464
HpySE526I ACGT 7 cut(s) 136, 153, 189, 280, 356, 615, 848
Hsp92I GRCGYC 1 cut(s) 615
Hsp92II CATG 6 cut(s) 14, 147, 254, 613, 684, 1070
HspAI GCGC 1 cut(s) 396
Kzo9I GATC 4 cut(s) 204, 427, 931, 1008
LmnI GCTCC 5 cut(s) 83, 128, 218, 418, 655
Lsp1109I GCAGC 1 cut(s) 1015
LweI GCATC 1 cut(s) 787
MaeI CTAG 3 cut(s) 20, 80, 1093
MaeII ACGT 7 cut(s) 136, 153, 189, 280, 356, 615, 848
MaeIII GTNAC 1 cut(s) 1048
MalI GATC 4 cut(s) 206, 429, 933, 1010
MboI GATC 4 cut(s) 204, 427, 931, 1008
MboII GAAGA 5 cut(s) 184, 437, 700, 718, 908
MflI RGATCY 2 cut(s) 427, 931
MhlI GDGCHC 2 cut(s) 133, 606
MluCI AATT 3 cut(s) 90, 300, 342
MlyI GAGTC 6 cut(s) 442, 477, 479, 627, 785, 820
MmeI TCCRAC 1 cut(s) 136
MseI TTAA 4 cut(s) 270, 639, 816, 845
MslI CAYNNNNRTG 1 cut(s) 212
MspI CCGG 3 cut(s) 431, 730, 890
MspR9I CCNGG 5 cut(s) 490, 644, 721, 763, 891
MvaI CCWGG 4 cut(s) 490, 644, 721, 763
MwoI GCNNNNNNNGC 3 cut(s) 92, 721, 730
NciI CCSGG 1 cut(s) 891
NcoI CCATGG 1 cut(s) 680
NdeII GATC 4 cut(s) 204, 427, 931, 1008
NlaIII CATG 6 cut(s) 14, 147, 254, 613, 684, 1070
NlaIV GGNNCC 6 cut(s) 243, 338, 494, 605, 868, 996
NmeAIII GCCGAG 1 cut(s) 759
NmuCI GTSAC 1 cut(s) 1048
NspI RCATGY 1 cut(s) 254
OliI CACNNNNGTG 1 cut(s) 212
PfeI GAWTC 1 cut(s) 120
PflMI CCANNNNNTGG 1 cut(s) 113
PfoI TCCNGGA 1 cut(s) 488
PkrI GCNGC 1 cut(s) 1005
PleI GAGTC 6 cut(s) 442, 476, 479, 627, 784, 819
PmaCI CACGTG 1 cut(s) 357
PmlI CACGTG 1 cut(s) 357
PpsI GAGTC 6 cut(s) 442, 476, 479, 627, 784, 819
Ppu21I YACGTR 2 cut(s) 137, 357
PpuMI RGGWCCY 2 cut(s) 242, 867
Psp124BI GAGCTC 1 cut(s) 133
Psp1406I AACGTT 1 cut(s) 848
Psp5II RGGWCCY 2 cut(s) 242, 867
Psp6I CCWGG 4 cut(s) 488, 642, 719, 761
PspCI CACGTG 1 cut(s) 357
PspEI GGTNACC 1 cut(s) 1048
PspFI CCCAGC 1 cut(s) 956
PspGI CCWGG 4 cut(s) 488, 642, 719, 761
PspN4I GGNNCC 6 cut(s) 243, 338, 494, 605, 868, 996
PspPI GGNCC 6 cut(s) 242, 337, 565, 677, 867, 1077
PspPPI RGGWCCY 2 cut(s) 242, 867
PsrI GAACNNNNNNTAC 2 cut(s) 656, 688
PstNI CAGNNNCTG 1 cut(s) 860
PsuI RGATCY 2 cut(s) 427, 931
RsaI GTAC 3 cut(s) 279, 674, 770
RsaNI GTAC 3 cut(s) 278, 673, 769
RseI CAYNNNNRTG 1 cut(s) 212
SacI GAGCTC 1 cut(s) 133
SaqAI TTAA 4 cut(s) 270, 639, 816, 845
SatI GCNGC 1 cut(s) 1004
Sau3AI GATC 4 cut(s) 204, 427, 931, 1008
Sau96I GGNCC 6 cut(s) 242, 337, 565, 677, 867, 1077
SchI GAGTC 6 cut(s) 442, 477, 479, 627, 785, 820
ScrFI CCNGG 5 cut(s) 490, 644, 721, 763, 891
SduI GDGCHC 2 cut(s) 133, 606
SfaNI GCATC 1 cut(s) 787
SfcI CTRYAG 1 cut(s) 628
SinI GGWCC 3 cut(s) 242, 337, 867
SmiMI CAYNNNNRTG 1 cut(s) 212
SmlI CTYRAG 1 cut(s) 832
SmoI CTYRAG 1 cut(s) 832
SnaBI TACGTA 1 cut(s) 137
Sse9I AATT 3 cut(s) 90, 300, 342
SsiI CCGC 2 cut(s) 766, 1046
SspI AATATT 1 cut(s) 112
SspMI CTAG 3 cut(s) 20, 80, 1093
SstI GAGCTC 1 cut(s) 133
StyD4I CCNGG 5 cut(s) 488, 642, 719, 761, 889
StyI CCWWGG 3 cut(s) 79, 245, 680
TaaI ACNGT 1 cut(s) 412
TaiI ACGT 7 cut(s) 139, 156, 192, 283, 359, 618, 851
TaqI TCGA 3 cut(s) 549, 826, 909
TasI AATT 3 cut(s) 90, 300, 342
TfiI GAWTC 1 cut(s) 120
Tru1I TTAA 4 cut(s) 270, 639, 816, 845
Tru9I TTAA 4 cut(s) 270, 639, 816, 845
TscAI CASTG 3 cut(s) 388, 415, 865
TseFI GTSAC 1 cut(s) 1048
TseI GCWGC 1 cut(s) 1003
Tsp45I GTSAC 1 cut(s) 1048
TspDTI ATGAA 5 cut(s) 81, 302, 383, 701, 868
TspRI CASTG 3 cut(s) 388, 415, 865
Van91I CCANNNNNTGG 1 cut(s) 113
VpaK11BI GGWCC 3 cut(s) 242, 337, 867
XapI RAATTY 1 cut(s) 342
XceI RCATGY 1 cut(s) 254
XcmI CCANNNNNNNNNTGG 2 cut(s) 510, 1029
XmaJI CCTAGG 1 cut(s) 79
XmiI GTMKAC 1 cut(s) 441
XspI CTAG 3 cut(s) 20, 80, 1093
ZraI GACGTC 1 cut(s) 616
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.