Rmu_sc0005640.1_g000009

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005640.1
OG0000073
Physical Location & Seq
Reverse (-)
36033 .. 38467
2435 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005640.1_g000009.1.cds

Sequence Viewer

Length: 1710 bp
atgatattccctttgaagatgaggaaggctatgtctgttaactttgaacatagtgctgattttcttaatctagagtatgggatagacctattgggtttacgtattgttgatgaggaaccaagtttgggaggaattaaggctactctaaggggatctggaaaactctttgccaaatccgtattattagagaacatctactgtctcacagtaggttctgagaagttagctcggaagttcctggaggatagcccctggaatgtcaagggatactgtttttctgttcgtcattggcccagatatcactccattgatgatattgaggctaaccgagcagtatactggatacaggcacatggagttcctctggaccaattatccctaaacaaaggaagaaagcttgggtccttactgggttcagctatagaagtagaagaccctttgattataggtaacaagggttacttgagaatgagagtagacttggatactactaaacccctagctactttcgtcaacctccccagactaaattcttctgtatcaaaaatcaggttaaggtatgagaacctgaagaacttttgcttcaattgtggccgtcttggacacatggtttcttcttacagattcagaaagcatccacttgttatcaagctcggtatagtctatgattcatcacttatcgctgagcccccccaaaagcctgtcttcacgcaagtgaccttccctctaaagtatccgtatgctccaacgaccagaatttttcatcggagcaagaacaaagatatttcaaattctggggatgcggcgtcttctgatggggacagatcggagttggcacactgcacaaaaactgatatgaacagctcctccatgtccctgccaacaaaaactgatggagctatgtcccactttctaatacctagaacaaagctcaagctacaaggacagaacatacccaacatgtgggatcctgaagcatatggtgccctgtatcaaaatggtggcgttacccgtgcctttaataggttgagtttgcaacatgagtcttgggccgatccagaattccgggttttcgactatctttgtgtggtggtagaggaagatgacgaggccatagaggcagagttagtgcctaaaaagactgttttcaagcctttggaaggtgaattttcaactgttgaagctggtacttctgatgatattcaccaaggatctaaggagaaagataaggcagagttttggaactcctggaataatcggagttggagagatgacacgccttggttggtaatttgtgattttaatgagatgctttgccagtttgaaatggagggaggtgtgtcttggagtcccaacaaaagggtctttcttcgtaatttcatgaacaccaatttactattggacattggcttcaaaggtcaaaggttcacctgggctagaactgaagatgaggtgattgttcttcaagagagattagatagaagtttggtcaatgattcttggctactgctttggccaaactcttgtctgtctcacctaacttggattggatccaatcataattcaatcttattagataccaaccctgttttacagaagtgtaaaccatcctttaaatttgaggctctttgggctgatgaggaagaaatcgagcctattatcaatgattgttgggataactctaccaatatccccaaggcaattcaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_3 zf-CCHC_4

Protein Analysis

569

Amino Acids

65.01

Weight (kDa)

6.16

Isoelectric Point (pI)

36.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 983
AccB7I CCANNNNNTGG 1 cut(s) 963
AccI GTMKAC 2 cut(s) 336, 477
AciI CCGC 1 cut(s) 803
AclWI GGATC 7 cut(s) 160, 962, 975, 1049, 1219, 1545, 1558
AcoI YGGCCR 2 cut(s) 592, 1514
AcsI RAATTY 6 cut(s) 529, 756, 790, 1061, 1166, 1616
AcuI CTGAAG 3 cut(s) 590, 993, 1464
AcyI GRCGYC 1 cut(s) 806
AfaI GTAC 1 cut(s) 1189
AfiI CCNNNNNNNGG 5 cut(s) 125, 963, 1023, 1160, 1359
AflIII ACRYGT 1 cut(s) 960
AjnI CCWGG 4 cut(s) 237, 251, 1247, 1430
AleI CACNNNNGTG 1 cut(s) 713
AloI GAACNNNNNNTCC 2 cut(s) 851, 883
Alw26I GTCTC 2 cut(s) 206, 1536
AlwI GGATC 7 cut(s) 160, 962, 975, 1049, 1219, 1545, 1558
AoxI GGCC 5 cut(s) 290, 592, 1050, 1110, 1514
ApoI RAATTY 6 cut(s) 529, 756, 790, 1061, 1166, 1616
AspS9I GGNCC 4 cut(s) 291, 367, 402, 1050
AsuC2I CCSGG 1 cut(s) 1067
AsuHPI GGTGA 5 cut(s) 1175, 1196, 1420, 1465, 1526
AvaII GGWCC 2 cut(s) 367, 402
BaeGI GKGCMC 1 cut(s) 988
BalI TGGCCA 1 cut(s) 1516
BamHI GGATCC 2 cut(s) 967, 1550
BanI GGYRCC 1 cut(s) 983
BanII GRGCYC 1 cut(s) 690
BbsI GAAGAC 3 cut(s) 438, 697, 801
BccI CCATC 3 cut(s) 809, 887, 1615
BceAI ACGGC 1 cut(s) 579
BciT130I CCWGG 4 cut(s) 239, 253, 1249, 1432
BciVI GTATCC 4 cut(s) 260, 336, 478, 744
BcnI CCSGG 1 cut(s) 1067
BcoDI GTCTC 2 cut(s) 206, 1536
BfaI CTAG 4 cut(s) 71, 500, 921, 1437
BfmI CTRYAG 1 cut(s) 420
BfuI GTATCC 4 cut(s) 260, 336, 478, 744
BglI GCCNNNNNGGC 1 cut(s) 1118
BisI GCNGC 1 cut(s) 804
BlpI GCTNAGC 1 cut(s) 684
BlsI GCNGC 1 cut(s) 805
Bme1390I CCNGG 5 cut(s) 239, 253, 1067, 1249, 1432
Bme18I GGWCC 2 cut(s) 367, 402
BmgT120I GGNCC 4 cut(s) 291, 367, 402, 1050
BmiI GGNNCC 5 cut(s) 117, 403, 969, 985, 1552
BmrFI CCNGG 5 cut(s) 239, 253, 1067, 1249, 1432
BmrI ACTGGG 1 cut(s) 419
BmsI GCATC 3 cut(s) 643, 790, 1299
BmuI ACTGGG 1 cut(s) 419
BpiI GAAGAC 3 cut(s) 438, 697, 801
BpmI CTGGAG 1 cut(s) 260
Bpu1102I GCTNAGC 1 cut(s) 684
BpuEI CTTGAG 2 cut(s) 484, 917
BpuMI CCSGG 1 cut(s) 1067
BsaAI YACGTR 1 cut(s) 101
BsaHI GRCGYC 1 cut(s) 806
BsaJI CCNNGG 5 cut(s) 251, 1207, 1280, 1431, 1695
BsaXI ACNNNNNCTCC 2 cut(s) 851, 881
Bsc4I CCNNNNNNNGG 5 cut(s) 125, 963, 1023, 1160, 1359
Bse1I ACTGG 3 cut(s) 344, 414, 1318
BseBI CCWGG 4 cut(s) 239, 253, 1249, 1432
BseDI CCNNGG 5 cut(s) 251, 1207, 1280, 1431, 1695
BseGI GGATG 3 cut(s) 634, 805, 1607
BseLI CCNNNNNNNGG 5 cut(s) 125, 963, 1023, 1160, 1359
BseMII CTCAG 2 cut(s) 207, 675
BseNI ACTGG 3 cut(s) 344, 414, 1318
BseRI GAGGAG 1 cut(s) 856
BseSI GKGCMC 1 cut(s) 988
BsgI GTGCAG 1 cut(s) 826
BshFI GGCC 5 cut(s) 292, 594, 1052, 1112, 1516
BshNI GGYRCC 1 cut(s) 983
BsiSI CCGG 1 cut(s) 1066
BslFI GGGAC 4 cut(s) 833, 859, 889, 1335
BslI CCNNNNNNNGG 5 cut(s) 125, 963, 1023, 1160, 1359
BsmAI GTCTC 2 cut(s) 206, 1536
BsmFI GGGAC 4 cut(s) 833, 859, 889, 1335
BsnI GGCC 5 cut(s) 292, 594, 1052, 1112, 1516
Bsp1286I GDGCHC 2 cut(s) 690, 988
Bsp143I GATC 6 cut(s) 152, 824, 967, 1054, 1211, 1550
Bsp1720I GCTNAGC 1 cut(s) 684
BspACI CCGC 1 cut(s) 803
BspANI GGCC 5 cut(s) 292, 594, 1052, 1112, 1516
BspCNI CTCAG 2 cut(s) 208, 676
BspHI TCATGA 1 cut(s) 1380
BspLI GGNNCC 5 cut(s) 117, 403, 969, 985, 1552
BspPI GGATC 7 cut(s) 160, 962, 975, 1049, 1219, 1545, 1558
BspT107I GGYRCC 1 cut(s) 983
BsrI ACTGG 3 cut(s) 344, 414, 1318
BssECI CCNNGG 5 cut(s) 251, 1207, 1280, 1431, 1695
BssMI GATC 6 cut(s) 152, 824, 967, 1054, 1211, 1550
BssNAI GTATAC 1 cut(s) 337
BssNI GRCGYC 1 cut(s) 806
BssT1I CCWWGG 3 cut(s) 1207, 1280, 1695
Bst1107I GTATAC 1 cut(s) 337
Bst2UI CCWGG 4 cut(s) 239, 253, 1249, 1432
Bst4CI ACNGT 5 cut(s) 200, 208, 272, 1144, 1177
BstACI GRCGYC 1 cut(s) 806
BstAPI GCANNNNNTGC 1 cut(s) 983
BstBAI YACGTR 1 cut(s) 101
BstDEI CTNAG 4 cut(s) 146, 216, 684, 1215
BstENI CCTNNNNNAGG 2 cut(s) 1021, 1158
BstF5I GGATG 3 cut(s) 634, 805, 1607
BstKTI GATC 6 cut(s) 155, 827, 970, 1057, 1214, 1553
BstMAI GTCTC 2 cut(s) 206, 1536
BstMBI GATC 6 cut(s) 152, 824, 967, 1054, 1211, 1550
BstMWI GCNNNNNNNGC 4 cut(s) 329, 983, 1118, 1631
BstNI CCWGG 4 cut(s) 239, 253, 1249, 1432
BstNSI RCATGY 1 cut(s) 964
BstSCI CCNGG 5 cut(s) 237, 251, 1065, 1247, 1430
BstSFI CTRYAG 1 cut(s) 420
BstSLI GKGCMC 1 cut(s) 988
BstSNI TACGTA 1 cut(s) 101
BstV2I GAAGAC 3 cut(s) 438, 697, 801
BstX2I RGATCY 4 cut(s) 152, 967, 1211, 1550
BstYI RGATCY 4 cut(s) 152, 967, 1211, 1550
BstZ17I GTATAC 1 cut(s) 337
BsuI GTATCC 4 cut(s) 260, 336, 478, 744
BsuRI GGCC 5 cut(s) 292, 594, 1052, 1112, 1516
BtsCI GGATG 3 cut(s) 634, 805, 1607
BtsI GCAGTG 1 cut(s) 838
BtsIMutI CAGTG 1 cut(s) 838
CciI TCATGA 1 cut(s) 1380
Cfr13I GGNCC 4 cut(s) 291, 367, 402, 1050
CseI GACGC 1 cut(s) 795
Csp6I GTAC 1 cut(s) 1188
CviAII CATG 6 cut(s) 353, 607, 871, 961, 1040, 1381
CviQI GTAC 1 cut(s) 1188
DdeI CTNAG 4 cut(s) 146, 216, 684, 1215
DpnI GATC 6 cut(s) 154, 826, 969, 1056, 1213, 1552
DpnII GATC 6 cut(s) 152, 824, 967, 1054, 1211, 1550
DraI TTTAAA 1 cut(s) 1615
EaeI YGGCCR 2 cut(s) 592, 1514
Eco105I TACGTA 1 cut(s) 101
Eco130I CCWWGG 3 cut(s) 1207, 1280, 1695
Eco24I GRGCYC 1 cut(s) 690
Eco32I GATATC 1 cut(s) 299
Eco47I GGWCC 2 cut(s) 367, 402
Eco57I CTGAAG 3 cut(s) 590, 993, 1464
EcoNI CCTNNNNNAGG 2 cut(s) 1021, 1158
EcoO109I RGGNCCY 1 cut(s) 402
EcoRI GAATTC 1 cut(s) 1061
EcoRII CCWGG 4 cut(s) 237, 251, 1247, 1430
EcoRV GATATC 1 cut(s) 299
EcoT14I CCWWGG 3 cut(s) 1207, 1280, 1695
EcoT38I GRGCYC 1 cut(s) 690
ErhI CCWWGG 3 cut(s) 1207, 1280, 1695
FaeI CATG 6 cut(s) 356, 610, 874, 964, 1043, 1384
FalI AAGNNNNNCTT 4 cut(s) 446, 478, 689, 721
FaqI GGGAC 4 cut(s) 833, 859, 889, 1335
FatI CATG 6 cut(s) 352, 606, 870, 960, 1039, 1380
FauNDI CATATG 1 cut(s) 979
FblI GTMKAC 2 cut(s) 336, 477
Fnu4HI GCNGC 1 cut(s) 804
FokI GGATG 3 cut(s) 621, 812, 1594
FriOI GRGCYC 1 cut(s) 690
Fsp4HI GCNGC 1 cut(s) 804
FspBI CTAG 4 cut(s) 71, 500, 921, 1437
GluI GCNGC 1 cut(s) 804
GsuI CTGGAG 1 cut(s) 260
HaeIII GGCC 5 cut(s) 292, 594, 1052, 1112, 1516
HapII CCGG 1 cut(s) 1066
HgaI GACGC 1 cut(s) 795
Hin1I GRCGYC 1 cut(s) 806
Hin1II CATG 6 cut(s) 356, 610, 874, 964, 1043, 1384
HincII GTYRAC 2 cut(s) 40, 514
HindII GTYRAC 2 cut(s) 40, 514
HindIII AAGCTT 1 cut(s) 395
HinfI GANTC 5 cut(s) 624, 668, 1043, 1348, 1496
HpaI GTTAAC 1 cut(s) 40
HpaII CCGG 1 cut(s) 1066
HphI GGTGA 5 cut(s) 1175, 1196, 1420, 1465, 1526
Hpy166II GTNNAC 7 cut(s) 40, 98, 337, 478, 514, 1428, 1604
Hpy188I TCNGA 8 cut(s) 217, 231, 629, 768, 814, 829, 1195, 1260
Hpy188III TCNNGA 7 cut(s) 71, 156, 365, 971, 1058, 1381, 1466
Hpy8I GTNNAC 7 cut(s) 40, 98, 337, 478, 514, 1428, 1604
HpyAV CCTTC 3 cut(s) 19, 730, 1154
HpyCH4III ACNGT 5 cut(s) 200, 208, 272, 1144, 1177
HpyCH4IV ACGT 1 cut(s) 100
HpyCH4V TGCA 2 cut(s) 843, 1036
HpyF10VI GCNNNNNNNGC 4 cut(s) 329, 983, 1118, 1631
HpyF3I CTNAG 4 cut(s) 146, 216, 684, 1215
HpySE526I ACGT 1 cut(s) 100
Hsp92I GRCGYC 1 cut(s) 806
Hsp92II CATG 6 cut(s) 356, 610, 874, 964, 1043, 1384
KspAI GTTAAC 1 cut(s) 40
Kzo9I GATC 6 cut(s) 152, 824, 967, 1054, 1211, 1550
LmnI GCTCC 4 cut(s) 748, 768, 869, 896
LweI GCATC 3 cut(s) 643, 790, 1299
MaeI CTAG 4 cut(s) 71, 500, 921, 1437
MaeII ACGT 1 cut(s) 100
MaeIII GTNAC 4 cut(s) 449, 458, 715, 1006
MalI GATC 6 cut(s) 154, 826, 969, 1056, 1213, 1552
MboI GATC 6 cut(s) 152, 824, 967, 1054, 1211, 1550
MfeI CAATTG 1 cut(s) 586
MflI RGATCY 4 cut(s) 152, 967, 1211, 1550
MhlI GDGCHC 2 cut(s) 690, 988
MlsI TGGCCA 1 cut(s) 1516
MluNI TGGCCA 1 cut(s) 1516
MlyI GAGTC 2 cut(s) 1052, 1357
MmeI TCCRAC 2 cut(s) 770, 1244
Mox20I TGGCCA 1 cut(s) 1516
MscI TGGCCA 1 cut(s) 1516
MseI TTAA 7 cut(s) 39, 66, 135, 554, 1020, 1302, 1614
MslI CAYNNNNRTG 1 cut(s) 713
Msp20I TGGCCA 1 cut(s) 1516
MspI CCGG 1 cut(s) 1066
MspR9I CCNGG 5 cut(s) 239, 253, 1067, 1249, 1432
MunI CAATTG 1 cut(s) 586
MvaI CCWGG 4 cut(s) 239, 253, 1249, 1432
MwoI GCNNNNNNNGC 4 cut(s) 329, 983, 1118, 1631
NciI CCSGG 1 cut(s) 1067
NdeI CATATG 1 cut(s) 979
NdeII GATC 6 cut(s) 152, 824, 967, 1054, 1211, 1550
NlaIII CATG 6 cut(s) 356, 610, 874, 964, 1043, 1384
NlaIV GGNNCC 5 cut(s) 117, 403, 969, 985, 1552
NmuCI GTSAC 1 cut(s) 715
NspI RCATGY 1 cut(s) 964
OliI CACNNNNGTG 1 cut(s) 713
PagI TCATGA 1 cut(s) 1380
PciI ACATGT 1 cut(s) 960
PfeI GAWTC 3 cut(s) 624, 668, 1496
PflMI CCANNNNNTGG 1 cut(s) 963
PfoI TCCNGGA 2 cut(s) 237, 1247
PkrI GCNGC 1 cut(s) 805
PleI GAGTC 2 cut(s) 1051, 1356
PpsI GAGTC 2 cut(s) 1051, 1356
Ppu21I YACGTR 1 cut(s) 101
PpuMI RGGWCCY 1 cut(s) 402
PscI ACATGT 1 cut(s) 960
Psp5II RGGWCCY 1 cut(s) 402
Psp6I CCWGG 4 cut(s) 237, 251, 1247, 1430
PspGI CCWGG 4 cut(s) 237, 251, 1247, 1430
PspN4I GGNNCC 5 cut(s) 117, 403, 969, 985, 1552
PspPI GGNCC 4 cut(s) 291, 367, 402, 1050
PspPPI RGGWCCY 1 cut(s) 402
PsuI RGATCY 4 cut(s) 152, 967, 1211, 1550
RsaI GTAC 1 cut(s) 1189
RsaNI GTAC 1 cut(s) 1188
RseI CAYNNNNRTG 1 cut(s) 713
SaqAI TTAA 7 cut(s) 39, 66, 135, 554, 1020, 1302, 1614
SatI GCNGC 1 cut(s) 804
Sau3AI GATC 6 cut(s) 152, 824, 967, 1054, 1211, 1550
Sau96I GGNCC 4 cut(s) 291, 367, 402, 1050
SchI GAGTC 2 cut(s) 1052, 1357
ScrFI CCNGG 5 cut(s) 239, 253, 1067, 1249, 1432
SduI GDGCHC 2 cut(s) 690, 988
SfaNI GCATC 3 cut(s) 643, 790, 1299
SfcI CTRYAG 1 cut(s) 420
SinI GGWCC 2 cut(s) 367, 402
SmiMI CAYNNNNRTG 1 cut(s) 713
SmlI CTYRAG 2 cut(s) 463, 932
SmoI CTYRAG 2 cut(s) 463, 932
SnaBI TACGTA 1 cut(s) 101
SsiI CCGC 1 cut(s) 803
SspMI CTAG 4 cut(s) 71, 500, 921, 1437
StyD4I CCNGG 5 cut(s) 237, 251, 1065, 1247, 1430
StyI CCWWGG 3 cut(s) 1207, 1280, 1695
TaaI ACNGT 5 cut(s) 200, 208, 272, 1144, 1177
TaiI ACGT 1 cut(s) 103
TaqI TCGA 2 cut(s) 1074, 1650
TauI GCSGC 1 cut(s) 806
TfiI GAWTC 3 cut(s) 624, 668, 1496
Tru1I TTAA 7 cut(s) 39, 66, 135, 554, 1020, 1302, 1614
Tru9I TTAA 7 cut(s) 39, 66, 135, 554, 1020, 1302, 1614
TscAI CASTG 1 cut(s) 845
TseFI GTSAC 1 cut(s) 715
Tsp45I GTSAC 1 cut(s) 715
TspDTI ATGAA 5 cut(s) 660, 752, 872, 1369, 1397
TspGWI ACGGA 2 cut(s) 166, 726
TspRI CASTG 1 cut(s) 845
Van91I CCANNNNNTGG 1 cut(s) 963
VpaK11BI GGWCC 2 cut(s) 367, 402
XagI CCTNNNNNAGG 2 cut(s) 1021, 1158
XapI RAATTY 6 cut(s) 529, 756, 790, 1061, 1166, 1616
XbaI TCTAGA 1 cut(s) 70
XceI RCATGY 1 cut(s) 964
XcmI CCANNNNNNNNNTGG 1 cut(s) 1396
XmiI GTMKAC 2 cut(s) 336, 477
XspI CTAG 4 cut(s) 71, 500, 921, 1437
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.