RLG00000021850

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000073
Physical Location & Seq
Forward (+)
78805378 .. 78810499
5122 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021850

Sequence Viewer

Length: 1287 bp
ATGTTACACAATTATCCAAAGGACAAGCTGCTCCCGACCCCACCGGTGACCCATGCCTCATCTCTGAAGGTACACCCATTTCCTAGCCCTAACTGGCTAAAACTTGCTGTCACAACAACCAAAACTCATGTCGAGTGGACTAGAAGAGTCAATCCCCCACCAATGAGTGTCAAACCATGGCCCAATGGGTCACAACCCTCAGTGGCTGATAATCCTGAGGCCCAAGCCACTGTAGGCCCAAGCCACTTTAGGCCTGTATTACTGGGGAATGGTAAGGGAAAACCCCCCACGTACCGTTATTCTCCTACCTCTCTTGATCAGATTCAGACTTTAGCAATTAAACCTCCCCACCCGACTCAACCAACCACCCACCCAACTTTTAAGTCCTCACCCCTATTTCACCCATCAGCCAAAAGACTGTACTCTCAAACCTTTACCACCACAAACCCAAGACATCCCAAAACCCGTTCTCTTTCAACACTCAACTCCAATTCTACTTCGGAGGACAATTGGGACCCAACTCCCCCGGTTCTTACCCCTTCCAAAGCTGGTCTTTCAAAAGGCAGAGGTCGCCCACGTGGTAGAGGCAGAGGAGCCGGTGGGAGGCACTCAGTGGTTTCACCTCCGGTAACCAGAAGTGGCAGATTTGTTTCGAAAAAAAGGAGGTTTGATCCTTCCCCAAGCTCTGAACACAATTTGGGTGAATTTCAAGAGATTAGAGTCGAATGTTTGGATGACTCGTCAGAATTACGTTATGAAGCTCCCGGACAGACCCCGAATCCCATGTTGGCAATTAGAAAAATTCAAGATAGTTTTGGTGAGTGGTCTGCAACTTTGACTTCAAGGGAAACTCCCGGGACGAACAGTGATTCTTCTGCTTCCCCTCAACTCTGGCAGCCCCCTCCCCCACCCTTTGTCAAGATTAATGTGGATGGAGCATGGGATGAGGTGAATGGTAATAGTGGAATGGGAATTATTATCAGGAATCATAGCGGCCACTCAATTGCTGGAGCGAGTTTACATGGAAATCACAATTCTGCAGTAGAAGTGGAAGCTGAGGCTATTGTAAAGGGCCTCCAGCTGGCTGAGTTCATGAAGTGTAGAAATATCATTCTTGAAAGTGATTGTAAAGAAGTTATTTGTGCTATGGACAACCCGGATTTCACCCCAAATTGGAGAATTGTCCCAATGCTTAACAGGCCTGTCTTCTGGGTTCTTTTCTTTGCTCTTTTTGTAGCTTCTTTGATTCAGTTGTACTTTCTTTTCTTTCTCACCCCAGTGGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

429

Amino Acids

47.23

Weight (kDa)

9.67

Isoelectric Point (pI)

42.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_3 PF13456 309 - 385 1e-14 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 993
AclWI GGATC 1 cut(s) 665
AcoI YGGCCR 1 cut(s) 994
AcsI RAATTY 2 cut(s) 704, 801
AcuI CTGAAG 1 cut(s) 86
AcvI CACGTG 1 cut(s) 578
AdeI CACNNNGTG 1 cut(s) 613
AfaI GTAC 4 cut(s) 72, 293, 422, 1256
AfiI CCNNNNNNNGG 3 cut(s) 603, 1081, 1173
AgeI ACCGGT 1 cut(s) 43
AgsI TTSAA 6 cut(s) 477, 558, 710, 806, 843, 1118
AjuI GAANNNNNNNTTGG 2 cut(s) 770, 802
AleI CACNNNNGTG 1 cut(s) 1277
AluBI AGCT 7 cut(s) 28, 548, 684, 761, 1055, 1081, 1238
AluI AGCT 7 cut(s) 28, 548, 684, 761, 1055, 1081, 1238
AlwI GGATC 1 cut(s) 665
AlwNI CAGNNNCTG 1 cut(s) 206
Ama87I CYCGRG 1 cut(s) 854
AoxI GGCC 7 cut(s) 179, 219, 235, 251, 994, 1072, 1199
ApeKI GCWGC 2 cut(s) 28, 895
ApoI RAATTY 2 cut(s) 704, 801
ArsI GACNNNNNNTTYG 2 cut(s) 114, 146
AseI ATTAAT 1 cut(s) 924
AsiGI ACCGGT 1 cut(s) 43
AspS9I GGNCC 5 cut(s) 180, 220, 236, 514, 1072
AsuC2I CCSGG 5 cut(s) 527, 765, 855, 856, 1157
AsuHPI GGTGA 9 cut(s) 58, 381, 392, 612, 713, 830, 961, 1156, 1264
AsuII TTCGAA 1 cut(s) 653
AvaI CYCGRG 1 cut(s) 854
AvaII GGWCC 1 cut(s) 514
AxyI CCTNAGG 1 cut(s) 216
BbrPI CACGTG 1 cut(s) 578
BbsI GAAGAC 1 cut(s) 1198
BbvCI CCTCAGC 1 cut(s) 1056
BbvI GCAGC 2 cut(s) 15, 907
BccI CCATC 2 cut(s) 412, 926
BclI TGATCA 1 cut(s) 316
BcnI CCSGG 5 cut(s) 527, 765, 855, 856, 1157
BfaI CTAG 2 cut(s) 84, 141
BfmI CTRYAG 2 cut(s) 231, 1038
BisI GCNGC 3 cut(s) 29, 896, 994
BlsI GCNGC 3 cut(s) 30, 897, 995
Bme1390I CCNGG 5 cut(s) 527, 765, 855, 856, 1157
Bme18I GGWCC 1 cut(s) 514
BmeT110I CYCGRG 1 cut(s) 854
BmgT120I GGNCC 5 cut(s) 180, 220, 236, 514, 1072
BmiI GGNNCC 3 cut(s) 515, 516, 595
BmrFI CCNGG 5 cut(s) 527, 765, 855, 856, 1157
BmrI ACTGGG 2 cut(s) 272, 1271
BmuI ACTGGG 2 cut(s) 272, 1271
BpiI GAAGAC 1 cut(s) 1198
BpmI CTGGAG 2 cut(s) 1029, 1061
Bpu10I CCTNAGC 1 cut(s) 1056
Bpu14I TTCGAA 1 cut(s) 653
BpuMI CCSGG 5 cut(s) 527, 765, 855, 856, 1157
BsaAI YACGTR 2 cut(s) 291, 578
BsaJI CCNNGG 3 cut(s) 176, 525, 854
BsaWI WCCGGW 2 cut(s) 43, 625
Bsc4I CCNNNNNNNGG 3 cut(s) 603, 1081, 1173
Bse118I RCCGGY 2 cut(s) 43, 596
Bse1I ACTGG 3 cut(s) 98, 267, 1277
Bse21I CCTNAGG 1 cut(s) 216
BseDI CCNNGG 3 cut(s) 176, 525, 854
BseGI GGATG 4 cut(s) 454, 739, 937, 949
BseLI CCNNNNNNNGG 3 cut(s) 603, 1081, 1173
BseMII CTCAG 5 cut(s) 207, 213, 624, 1047, 1077
BseNI ACTGG 3 cut(s) 98, 267, 1277
BseRI GAGGAG 1 cut(s) 606
BseXI GCAGC 2 cut(s) 15, 907
BshFI GGCC 7 cut(s) 181, 221, 237, 253, 996, 1074, 1201
BshTI ACCGGT 1 cut(s) 43
BsiHKCI CYCGRG 1 cut(s) 854
BsiSI CCGG 7 cut(s) 44, 527, 597, 626, 765, 855, 1157
BslFI GGGAC 3 cut(s) 527, 871, 1169
BslI CCNNNNNNNGG 3 cut(s) 603, 1081, 1173
BsmFI GGGAC 3 cut(s) 527, 871, 1169
BsnI GGCC 7 cut(s) 181, 221, 237, 253, 996, 1074, 1201
BsoBI CYCGRG 1 cut(s) 854
Bsp119I TTCGAA 1 cut(s) 653
Bsp143I GATC 2 cut(s) 316, 670
Bsp19I CCATGG 1 cut(s) 176
BspACI CCGC 1 cut(s) 993
BspANI GGCC 7 cut(s) 181, 221, 237, 253, 996, 1074, 1201
BspCNI CTCAG 5 cut(s) 208, 212, 623, 1048, 1078
BspHI TCATGA 1 cut(s) 1092
BspLI GGNNCC 3 cut(s) 515, 516, 595
BspMAI CTGCAG 1 cut(s) 1042
BspPI GGATC 1 cut(s) 665
BspT104I TTCGAA 1 cut(s) 653
BsrFI RCCGGY 2 cut(s) 43, 596
BsrI ACTGG 3 cut(s) 98, 267, 1277
BssAI RCCGGY 2 cut(s) 43, 596
BssECI CCNNGG 3 cut(s) 176, 525, 854
BssMI GATC 2 cut(s) 316, 670
BssT1I CCWWGG 1 cut(s) 176
Bst4CI ACNGT 4 cut(s) 232, 296, 420, 866
Bst6I CTCTTC 1 cut(s) 139
BstBAI YACGTR 2 cut(s) 291, 578
BstBI TTCGAA 1 cut(s) 653
BstC8I GCNNGC 1 cut(s) 1083
BstDEI CTNAG 5 cut(s) 199, 216, 610, 1056, 1086
BstDSI CCRYGG 1 cut(s) 176
BstEII GGTNACC 2 cut(s) 46, 628
BstF5I GGATG 4 cut(s) 454, 739, 937, 949
BstKTI GATC 2 cut(s) 319, 673
BstMBI GATC 2 cut(s) 316, 670
BstMWI GCNNNNNNNGC 2 cut(s) 570, 1198
BstPI GGTNACC 2 cut(s) 46, 628
BstSCI CCNGG 5 cut(s) 525, 763, 853, 854, 1155
BstSFI CTRYAG 2 cut(s) 231, 1038
BstV1I GCAGC 2 cut(s) 15, 907
BstV2I GAAGAC 1 cut(s) 1198
Bsu36I CCTNAGG 1 cut(s) 216
BsuRI GGCC 7 cut(s) 181, 221, 237, 253, 996, 1074, 1201
BtgI CCRYGG 1 cut(s) 176
BtsCI GGATG 4 cut(s) 454, 739, 937, 949
BtsIMutI CAGTG 5 cut(s) 207, 228, 618, 871, 1284
Cac8I GCNNGC 1 cut(s) 1083
CaiI CAGNNNCTG 1 cut(s) 206
CciI TCATGA 1 cut(s) 1092
Cfr10I RCCGGY 2 cut(s) 43, 596
Cfr13I GGNCC 5 cut(s) 180, 220, 236, 514, 1072
Cfr9I CCCGGG 1 cut(s) 854
Csp6I GTAC 4 cut(s) 71, 292, 421, 1255
CspAI ACCGGT 1 cut(s) 43
CviAII CATG 7 cut(s) 53, 128, 177, 784, 939, 1022, 1093
CviQI GTAC 4 cut(s) 71, 292, 421, 1255
DdeI CTNAG 5 cut(s) 199, 216, 610, 1056, 1086
DpnI GATC 2 cut(s) 318, 672
DpnII GATC 2 cut(s) 316, 670
DraIII CACNNNGTG 1 cut(s) 613
EaeI YGGCCR 1 cut(s) 994
Eam1104I CTCTTC 1 cut(s) 139
EarI CTCTTC 1 cut(s) 139
Eco130I CCWWGG 1 cut(s) 176
Eco147I AGGCCT 2 cut(s) 253, 1201
Eco47I GGWCC 1 cut(s) 514
Eco57I CTGAAG 1 cut(s) 86
Eco72I CACGTG 1 cut(s) 578
Eco81I CCTNAGG 1 cut(s) 216
Eco88I CYCGRG 1 cut(s) 854
Eco91I GGTNACC 2 cut(s) 46, 628
EcoO109I RGGNCCY 2 cut(s) 514, 1072
EcoO65I GGTNACC 2 cut(s) 46, 628
EcoT14I CCWWGG 1 cut(s) 176
ErhI CCWWGG 1 cut(s) 176
FaeI CATG 7 cut(s) 56, 131, 180, 787, 942, 1025, 1096
FalI AAGNNNNNCTT 2 cut(s) 537, 569
FaqI GGGAC 3 cut(s) 527, 871, 1169
FatI CATG 7 cut(s) 52, 127, 176, 783, 938, 1021, 1092
FbaI TGATCA 1 cut(s) 316
Fnu4HI GCNGC 3 cut(s) 29, 896, 994
FokI GGATG 4 cut(s) 441, 746, 944, 956
Fsp4HI GCNGC 3 cut(s) 29, 896, 994
FspBI CTAG 2 cut(s) 84, 141
GluI GCNGC 3 cut(s) 29, 896, 994
GsuI CTGGAG 2 cut(s) 1029, 1061
HaeIII GGCC 7 cut(s) 181, 221, 237, 253, 996, 1074, 1201
HapII CCGG 7 cut(s) 44, 527, 597, 626, 765, 855, 1157
Hin1II CATG 7 cut(s) 56, 131, 180, 787, 942, 1025, 1096
HinfI GANTC 9 cut(s) 147, 322, 355, 720, 737, 778, 869, 985, 1246
HpaII CCGG 7 cut(s) 44, 527, 597, 626, 765, 855, 1157
HphI GGTGA 9 cut(s) 58, 381, 392, 612, 713, 830, 961, 1156, 1264
Hpy166II GTNNAC 3 cut(s) 73, 138, 1019
Hpy188I TCNGA 6 cut(s) 66, 321, 327, 502, 688, 745
Hpy188III TCNNGA 9 cut(s) 34, 215, 314, 710, 806, 919, 982, 1093, 1115
Hpy8I GTNNAC 3 cut(s) 73, 138, 1019
HpyAV CCTTC 3 cut(s) 61, 549, 684
HpyCH4III ACNGT 4 cut(s) 232, 296, 420, 866
HpyCH4IV ACGT 3 cut(s) 290, 577, 751
HpyCH4V TGCA 2 cut(s) 830, 1040
HpyF10VI GCNNNNNNNGC 2 cut(s) 570, 1198
HpyF3I CTNAG 5 cut(s) 199, 216, 610, 1056, 1086
HpySE526I ACGT 3 cut(s) 290, 577, 751
Hsp92II CATG 7 cut(s) 56, 131, 180, 787, 942, 1025, 1096
KflI GGGWCCC 1 cut(s) 514
Ksp22I TGATCA 1 cut(s) 316
Kzo9I GATC 2 cut(s) 316, 670
LmnI GCTCC 5 cut(s) 36, 593, 766, 935, 1010
Lsp1109I GCAGC 2 cut(s) 15, 907
MaeI CTAG 2 cut(s) 84, 141
MaeII ACGT 3 cut(s) 290, 577, 751
MaeIII GTNAC 5 cut(s) 3, 46, 109, 189, 628
MalI GATC 2 cut(s) 318, 672
MboI GATC 2 cut(s) 316, 670
MboII GAAGA 3 cut(s) 156, 864, 1198
MfeI CAATTG 2 cut(s) 508, 1002
MlyI GAGTC 4 cut(s) 156, 349, 729, 731
MseI TTAA 5 cut(s) 339, 381, 924, 1194, 1285
MslI CAYNNNNRTG 1 cut(s) 1277
MspA1I CMGCKG 1 cut(s) 1081
MspI CCGG 7 cut(s) 44, 527, 597, 626, 765, 855, 1157
MspR9I CCNGG 5 cut(s) 527, 765, 855, 856, 1157
MunI CAATTG 2 cut(s) 508, 1002
MwoI GCNNNNNNNGC 2 cut(s) 570, 1198
NciI CCSGG 5 cut(s) 527, 765, 855, 856, 1157
NcoI CCATGG 1 cut(s) 176
NdeII GATC 2 cut(s) 316, 670
NlaIII CATG 7 cut(s) 56, 131, 180, 787, 942, 1025, 1096
NlaIV GGNNCC 3 cut(s) 515, 516, 595
NmuCI GTSAC 3 cut(s) 46, 109, 189
NspV TTCGAA 1 cut(s) 653
OliI CACNNNNGTG 1 cut(s) 1277
PagI TCATGA 1 cut(s) 1092
PceI AGGCCT 2 cut(s) 253, 1201
PfeI GAWTC 5 cut(s) 322, 778, 869, 985, 1246
PfoI TCCNGGA 1 cut(s) 763
PinAI ACCGGT 1 cut(s) 43
PkrI GCNGC 3 cut(s) 30, 897, 995
PleI GAGTC 4 cut(s) 155, 349, 728, 731
PmaCI CACGTG 1 cut(s) 578
PmlI CACGTG 1 cut(s) 578
PpsI GAGTC 4 cut(s) 155, 349, 728, 731
Ppu21I YACGTR 2 cut(s) 291, 578
PpuMI RGGWCCY 1 cut(s) 514
PshBI ATTAAT 1 cut(s) 924
Psp5II RGGWCCY 1 cut(s) 514
PspCI CACGTG 1 cut(s) 578
PspEI GGTNACC 2 cut(s) 46, 628
PspN4I GGNNCC 3 cut(s) 515, 516, 595
PspPI GGNCC 5 cut(s) 180, 220, 236, 514, 1072
PspPPI RGGWCCY 1 cut(s) 514
PstI CTGCAG 1 cut(s) 1042
PstNI CAGNNNCTG 1 cut(s) 206
PvuII CAGCTG 1 cut(s) 1081
RsaI GTAC 4 cut(s) 72, 293, 422, 1256
RsaNI GTAC 4 cut(s) 71, 292, 421, 1255
RseI CAYNNNNRTG 1 cut(s) 1277
SaqAI TTAA 5 cut(s) 339, 381, 924, 1194, 1285
SatI GCNGC 3 cut(s) 29, 896, 994
Sau3AI GATC 2 cut(s) 316, 670
Sau96I GGNCC 5 cut(s) 180, 220, 236, 514, 1072
SchI GAGTC 4 cut(s) 156, 349, 729, 731
ScrFI CCNGG 5 cut(s) 527, 765, 855, 856, 1157
SfcI CTRYAG 2 cut(s) 231, 1038
SfuI TTCGAA 1 cut(s) 653
SgrAI CRCCGGYG 1 cut(s) 43
SinI GGWCC 1 cut(s) 514
SmaI CCCGGG 1 cut(s) 856
SmiMI CAYNNNNRTG 1 cut(s) 1277
SseBI AGGCCT 2 cut(s) 253, 1201
SsiI CCGC 1 cut(s) 993
SspMI CTAG 2 cut(s) 84, 141
StuI AGGCCT 2 cut(s) 253, 1201
StyD4I CCNGG 5 cut(s) 525, 763, 853, 854, 1155
StyI CCWWGG 1 cut(s) 176
TaaI ACNGT 4 cut(s) 232, 296, 420, 866
TaiI ACGT 3 cut(s) 293, 580, 754
TaqI TCGA 3 cut(s) 132, 653, 723
TatI WGTACW 2 cut(s) 420, 1254
TauI GCSGC 1 cut(s) 996
TfiI GAWTC 5 cut(s) 322, 778, 869, 985, 1246
Tru1I TTAA 5 cut(s) 339, 381, 924, 1194, 1285
Tru9I TTAA 5 cut(s) 339, 381, 924, 1194, 1285
TscAI CASTG 5 cut(s) 207, 235, 618, 871, 1284
TseFI GTSAC 3 cut(s) 46, 109, 189
TseI GCWGC 2 cut(s) 28, 895
Tsp45I GTSAC 3 cut(s) 46, 109, 189
TspDTI ATGAA 3 cut(s) 771, 1081, 1109
TspMI CCCGGG 1 cut(s) 854
TspRI CASTG 5 cut(s) 207, 235, 618, 871, 1284
VpaK11BI GGWCC 1 cut(s) 514
VspI ATTAAT 1 cut(s) 924
XapI RAATTY 2 cut(s) 704, 801
XcmI CCANNNNNNNNNTGG 1 cut(s) 1004
XmaI CCCGGG 1 cut(s) 854
XspI CTAG 2 cut(s) 84, 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.