Rmu_sc0000251.1_g000018

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000251.1
OG0000073
Physical Location & Seq
Forward (+)
96774 .. 97730
957 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000251.1_g000018.1.cds

Sequence Viewer

Length: 957 bp
atgaattccttatcgtcacctcaaagggaaattccctatgaggatgaaggaatcattgaggcaatgtcagtctgctttgaggacaatgcagacttcgtggacatcgaagagggaatcagtctcctaggtatccttattgctgatgaagagcctggggttgggggagttaaagctaccctgatgggcatttggaaatctcttggccaaatacgaattgtcagagtcaaaaagaacacctactgcctaactgttggctctgaaaagctggcaagcaagctcttgaaggatagcccctggaacgtaaaaggctactgcttcacgattcgtcattggacacgatatcaatccattgatgacatcaaaactaggagggcgacatattggatccaggctcatggcattcctctacatcagatgaatttcaacaatgggaggaaggtgggagaattgctggggtcggttattgaggtcgaagacccttccatcactggtaacaggggctaccttagattgagggtcgattttgatacgagcagacctatagcaactttcattcaactgccaagagccaactcctcttcatccaggatccgcctacagtatgagaacctccataatttctatttcaactgcggtcgtctaggtcatatggtctcctcatgcaggtaccaagtcaatcatgttctattatccatgggggtcaagtatgataactccctgattgctgcatctccacaaaaagcaatctttactcagtccaattttccggctgagttcccctatgcccctacaaccggagtctttggccggaacaaacttgggggaaggttacctcaaaattcaaattctggggaagcgggatcttcagagtacaatagacctatcagggcacacaattcaacttctgtggatgatgtgacagatagacacccccctctgggccatcatggtccttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_3 zf-CCHC_4

Protein Analysis

318

Amino Acids

35.56

Weight (kDa)

8.52

Isoelectric Point (pI)

39.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000073)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g17821 FvH4_2g04610 FvH4_2g09611 FvH4_2g13563 FvH4_3g21493 FvH4_3g32115 FvH4_3g35060 FvH4_4g00220 FvH4_4g06410 FvH4_4g10367 FvH4_4g10367 FvH4_4g10367 FvH4_5g06101 FvH4_5g08842 FvH4_5g27366 FvH4_5g31283 FvH4_6g11611 FvH4_6g23032 FvH4_7g05661 FvH4_7g06172
malus_domestica MD13G1263700.v1.1
prunus_persica Prupe.1G292300_v2.0.a1 Prupe.5G009700_v2.0.a1 Prupe.6G158100_v2.0.a1 Prupe.8G025100_v2.0.a1 Prupe.8G042600_v2.0.a1
pyrus_communis pycom02g02250 pycom02g16030 pycom05g10490 pycom09g06450 pycom09g06460 pycom13g26200 pycom16g17700
rosa_chinensis RchiOBHm_Chr2g0163321 RchiOBHm_Chr4g0401981 RchiOBHm_Chr5g0005991 RchiOBHm_Chr5g0027191 RchiOBHm_Chr6g0249771
rosa_laevigata RLG00000001040 RLG00000001764 RLG00000002239 RLG00000002240 RLG00000003259 RLG00000008993 RLG00000013847 RLG00000014178 RLG00000015576 RLG00000017269 RLG00000017355 RLG00000018127 RLG00000018602 RLG00000018615 RLG00000019904 RLG00000020044 RLG00000021849 RLG00000021850 RLG00000027965 RLG00000029266 RLG00000029820 RLG00000031112 RLG00000031915 RLG00000033568 RLG00000035013 RLG00000035677 RLG00000036568 RLG00000036628
rosa_multiflora Rmu_co8254085.1_g000001 Rmu_co8462383.1_g000001 Rmu_sc0000185.1_g000049 Rmu_sc0000251.1_g000018 Rmu_sc0000367.1_g000094 Rmu_sc0000498.1_g000023 Rmu_sc0000868.1_g000005 Rmu_sc0001521.1_g000047 Rmu_sc0001534.1_g000007 Rmu_sc0002014.1_g000012 Rmu_sc0003214.1_g000009 Rmu_sc0003573.1_g000041 Rmu_sc0003832.1_g000023 Rmu_sc0004677.1_g000015 Rmu_sc0004967.1_g000014 Rmu_sc0005426.1_g000001 Rmu_sc0005621.1_g000004 Rmu_sc0005640.1_g000009 Rmu_sc0005947.1_g000034 Rmu_sc0006889.1_g000011 Rmu_sc0007121.1_g000014 Rmu_sc0009191.1_g000017 Rmu_sc0010556.1_g000011 Rmu_sc0011396.1_g000007 Rmu_sc0019862.1_g000002 Rmu_sc0022931.1_g000003 Rmu_sc0024164.1_g000001 Rmu_ssc0000391.1_g000027
rosa_roxburghii Rroxscaffold_1G00050060 Rroxscaffold_1G00061810 Rroxscaffold_2G00109590 Rroxscaffold_2G00113810 Rroxscaffold_2G00124040 Rroxscaffold_2G00143620 Rroxscaffold_2G00154760 Rroxscaffold_4G00302820 Rroxscaffold_4G00302830 Rroxscaffold_4G00308680 Rroxscaffold_4G00310240 Rroxscaffold_4G00327890 Rroxscaffold_5G00334600 Rroxscaffold_5G00336050 Rroxscaffold_5G00346560 Rroxscaffold_5G00347860 Rroxscaffold_5G00347870 Rroxscaffold_5G00349330 Rroxscaffold_5G00351980 Rroxscaffold_6G00395280 Rroxscaffold_6G00396750 Rroxscaffold_6G00402910 Rroxscaffold_7G00174790 Rroxscaffold_7G00177570 Rroxscaffold_7G00191820 Rroxscaffold_7G00203480 Rroxscaffold_7G00204380
rosa_rugosa Rorug01G0106600 Rorug01G0106600 Rorug01G0148500.1 Rorug02G0224200 Rorug02G0225500 Rorug02G0233000 Rorug02G0630400 Rorug03G0198000 Rorug03G0232600.1 Rorug03G0240500 Rorug04G0032900 Rorug04G0073300 Rorug04G0118500 Rorug04G0149600.1 Rorug04G0205100 Rorug04G0256700 Rorug05G0020200 Rorug05G0050000 Rorug05G0247300 Rorug05G0295100 Rorug05G0337900 Rorug05G0542600 Rorug06G0034800 Rorug06G0035100 Rorug06G0220100 Rorug07G0091900 Rorug07G0271200
rosa_samantha Rh1AG118200 Rh1AG253000 Rh1AG296300 Rh1AG409000 Rh1AG410600 Rh1BG073400 Rh1BG130400 Rh1BG147300 Rh1BG163600 Rh1CG016000 Rh1DG012200 Rh1DG012300 Rh1DG078600 Rh1DG078800 Rh1DG138100 Rh1DG179200 Rh1DG192600 Rh1DG194500 Rh1DG194600 Rh1DG214300 Rh1DG245900 Rh1DG267000 Rh1DG322700 Rh1DG442700 Rh2AG282000 Rh2AG423000 Rh2AG423100 Rh2AG460700 Rh2AG466200 Rh2AG513400 Rh2AG547000 Rh2BG277800 Rh2BG281200 Rh2BG298300 Rh2BG304300 Rh2BG433500 Rh2CG276000 Rh2CG282600 Rh2CG325500 Rh2CG393000 Rh2DG319200 Rh2DG443400 Rh3AG169300 Rh3AG303600 Rh3BG195000 Rh3BG282600 Rh3BG343400 Rh3BG343500 Rh3BG344100 Rh3CG111700 Rh3CG185700 Rh3CG259100 Rh3CG293000 Rh3CG317900 Rh3CG340900 Rh3CG341000 Rh3CG341100 Rh3CG354700 Rh3CG359200 Rh3CG368100 Rh3DG179900 Rh3DG288700 Rh3DG302600 Rh3DG316000 Rh3DG324500 Rh3DG324600 Rh3DG343200 Rh3DG343300 Rh3DG362400 Rh4AG071800 Rh4BG034000 Rh4BG044300 Rh4BG044400 Rh4BG069600 Rh4BG157400 Rh4CG007000 Rh4CG030400 Rh4CG037900 Rh4CG077700 Rh4CG115000 Rh4CG162400 Rh4CG162500 Rh4CG165500 Rh4CG165600 Rh4CG172900 Rh4CG239700 Rh4DG055900 Rh4DG173200 Rh5AG354900 Rh5AG511100 Rh5BG112600 Rh5BG541000 Rh5BG541100 Rh5BG549300 Rh5CG004400 Rh5CG315000 Rh5CG563800 Rh5CG572100 Rh5DG112200 Rh5DG191300 Rh5DG407600 Rh5DG407700 Rh5DG567500 Rh6AG002600 Rh6AG051400 Rh6AG199800 Rh6AG199900 Rh6AG206200 Rh6AG391000 Rh6AG391100 Rh6BG007500 Rh6BG053400 Rh6BG225900 Rh6BG227100 Rh6BG232400 Rh6CG091100 Rh6CG125400 Rh6CG186700 Rh6CG222700 Rh6CG222800 Rh6CG235500 Rh6CG247200 Rh6CG331200 Rh6CG465100 Rh6DG183500 Rh6DG213500 Rh6DG238800 Rh6DG263700 Rh7AG211800 Rh7AG441800 Rh7BG008600 Rh7BG253000 Rh7BG390000 Rh7CG189600 Rh7CG401500 Rh7CG424200 Rh7CG428700 Rh7CG479800 Rh7CG494300 Rh7DG177000 Rh7DG218700 Rh7DG254000 Rh7DG294800 Rh7DG407200 Rh7DG448800 Rh7DG461500
rosa_wichuraiana Rw0G012180 Rw1G005270 Rw1G012310 Rw1G016890 Rw1G021700 Rw2G014380 Rw2G027690 Rw3G016400 Rw3G028230 Rw3G029320 Rw4G002060 Rw4G002100 Rw4G003980 Rw4G014140 Rw4G014770 Rw4G014780 Rw4G015760 Rw4G021230 Rw5G000520 Rw5G035610 Rw6G001680 Rw6G017890 Rw6G027440 Rw6G034130 Rw6G034170 Rw7G012430 Rw7G033870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 654
Acc65I GGTACC 1 cut(s) 666
AccB1I GGYRCC 1 cut(s) 666
AciI CCGC 3 cut(s) 592, 633, 857
AclWI GGATC 5 cut(s) 379, 392, 583, 596, 868
AcoI YGGCCR 2 cut(s) 202, 805
AcsI RAATTY 5 cut(s) 4, 30, 418, 838, 844
AcuI CTGAAG 1 cut(s) 849
AfaI GTAC 2 cut(s) 668, 872
AfiI CCNNNNNNNGG 5 cut(s) 158, 663, 794, 937, 938
AgsI TTSAA 6 cut(s) 283, 424, 557, 628, 843, 900
AjnI CCWGG 4 cut(s) 151, 293, 387, 584
AluBI AGCT 3 cut(s) 173, 265, 277
AluI AGCT 3 cut(s) 173, 265, 277
Alw26I GTCTC 2 cut(s) 125, 658
AlwI GGATC 5 cut(s) 379, 392, 583, 596, 868
AoxI GGCC 3 cut(s) 202, 805, 940
ApeKI GCWGC 1 cut(s) 725
ApoI RAATTY 5 cut(s) 4, 30, 418, 838, 844
Asp718I GGTACC 1 cut(s) 666
AspA2I CCTAGG 1 cut(s) 124
AspS9I GGNCC 2 cut(s) 940, 950
AsuHPI GGTGA 1 cut(s) 9
AvaII GGWCC 1 cut(s) 950
AvrII CCTAGG 1 cut(s) 124
BaeGI GKGCMC 1 cut(s) 892
BalI TGGCCA 1 cut(s) 204
BamHI GGATCC 2 cut(s) 384, 588
BanI GGYRCC 1 cut(s) 666
BbsI GAAGAC 1 cut(s) 480
BbvI GCAGC 1 cut(s) 712
BccI CCATC 3 cut(s) 175, 491, 951
BciT130I CCWGG 4 cut(s) 153, 295, 389, 586
BciVI GTATCC 1 cut(s) 140
BcoDI GTCTC 2 cut(s) 125, 658
BfaI CTAG 3 cut(s) 125, 366, 641
BfmI CTRYAG 2 cut(s) 540, 596
BfuAI ACCTGC 1 cut(s) 654
BfuI GTATCC 1 cut(s) 140
BisI GCNGC 1 cut(s) 726
BlnI CCTAGG 1 cut(s) 124
BlsI GCNGC 1 cut(s) 727
Bme1390I CCNGG 4 cut(s) 153, 295, 389, 586
Bme18I GGWCC 1 cut(s) 950
BmgT120I GGNCC 2 cut(s) 940, 950
BmiI GGNNCC 3 cut(s) 386, 590, 668
BmrFI CCNGG 4 cut(s) 153, 295, 389, 586
BmsI GCATC 1 cut(s) 737
BpiI GAAGAC 1 cut(s) 480
BsaBI GATNNNNATC 1 cut(s) 343
BsaI GGTCTC 1 cut(s) 658
BsaJI CCNNGG 4 cut(s) 124, 152, 293, 693
BsaWI WCCGGW 1 cut(s) 794
Bsc4I CCNNNNNNNGG 5 cut(s) 158, 663, 794, 937, 938
Bse1I ACTGG 1 cut(s) 493
Bse3DI GCAATG 1 cut(s) 69
Bse8I GATNNNNATC 1 cut(s) 343
BseBI CCWGG 4 cut(s) 153, 295, 389, 586
BseDI CCNNGG 4 cut(s) 124, 152, 293, 693
BseGI GGATG 3 cut(s) 49, 581, 916
BseJI GATNNNNATC 1 cut(s) 343
BseLI CCNNNNNNNGG 5 cut(s) 158, 663, 794, 937, 938
BseMI GCAATG 1 cut(s) 69
BseMII CTCAG 2 cut(s) 762, 767
BseNI ACTGG 1 cut(s) 493
BseRI GAGGAG 2 cut(s) 565, 646
BseSI GKGCMC 1 cut(s) 892
BseXI GCAGC 1 cut(s) 712
BseYI CCCAGC 1 cut(s) 451
Bsh1285I CGRYCG 1 cut(s) 637
BshFI GGCC 3 cut(s) 204, 807, 942
BshNI GGYRCC 1 cut(s) 666
BsiEI CGRYCG 1 cut(s) 637
BsiSI CCGG 3 cut(s) 767, 795, 808
BslI CCNNNNNNNGG 5 cut(s) 158, 663, 794, 937, 938
BsmAI GTCTC 2 cut(s) 125, 658
BsmI GAATGC 1 cut(s) 399
BsnI GGCC 3 cut(s) 204, 807, 942
Bso31I GGTCTC 1 cut(s) 658
Bsp1286I GDGCHC 1 cut(s) 892
Bsp143I GATC 3 cut(s) 384, 588, 860
Bsp19I CCATGG 1 cut(s) 693
BspACI CCGC 3 cut(s) 592, 633, 857
BspANI GGCC 3 cut(s) 204, 807, 942
BspCNI CTCAG 2 cut(s) 763, 766
BspLI GGNNCC 3 cut(s) 386, 590, 668
BspMI ACCTGC 1 cut(s) 654
BspPI GGATC 5 cut(s) 379, 392, 583, 596, 868
BspQI GCTCTTC 1 cut(s) 141
BspT107I GGYRCC 1 cut(s) 666
BspTNI GGTCTC 1 cut(s) 658
BsrDI GCAATG 1 cut(s) 69
BsrI ACTGG 1 cut(s) 493
BssECI CCNNGG 4 cut(s) 124, 152, 293, 693
BssMI GATC 3 cut(s) 384, 588, 860
BssT1I CCWWGG 2 cut(s) 124, 693
Bst2UI CCWGG 4 cut(s) 153, 295, 389, 586
Bst4CI ACNGT 2 cut(s) 250, 600
Bst6I CTCTTC 3 cut(s) 102, 141, 583
BstC8I GCNNGC 3 cut(s) 267, 271, 275
BstDEI CTNAG 3 cut(s) 506, 753, 771
BstDSI CCRYGG 1 cut(s) 693
BstEII GGTNACC 1 cut(s) 828
BstENI CCTNNNNNAGG 1 cut(s) 661
BstF5I GGATG 3 cut(s) 49, 581, 916
BstKTI GATC 3 cut(s) 387, 591, 863
BstMAI GTCTC 2 cut(s) 125, 658
BstMBI GATC 3 cut(s) 384, 588, 860
BstMCI CGRYCG 1 cut(s) 637
BstNI CCWGG 4 cut(s) 153, 295, 389, 586
BstPI GGTNACC 1 cut(s) 828
BstSCI CCNGG 4 cut(s) 151, 293, 387, 584
BstSFI CTRYAG 2 cut(s) 540, 596
BstSLI GKGCMC 1 cut(s) 892
BstV1I GCAGC 1 cut(s) 712
BstV2I GAAGAC 1 cut(s) 480
BstX2I RGATCY 3 cut(s) 384, 588, 860
BstXI CCANNNNNNTGG 1 cut(s) 395
BstYI RGATCY 3 cut(s) 384, 588, 860
BsuI GTATCC 1 cut(s) 140
BsuRI GGCC 3 cut(s) 204, 807, 942
BtgI CCRYGG 1 cut(s) 693
BtsCI GGATG 3 cut(s) 49, 581, 916
BtsIMutI CAGTG 1 cut(s) 486
BveI ACCTGC 1 cut(s) 654
Cac8I GCNNGC 3 cut(s) 267, 271, 275
Cfr13I GGNCC 2 cut(s) 940, 950
Csp6I GTAC 2 cut(s) 667, 871
CspCI CAANNNNNGTGG 2 cut(s) 888, 923
CviAII CATG 5 cut(s) 395, 660, 680, 694, 947
CviQI GTAC 2 cut(s) 667, 871
DdeI CTNAG 3 cut(s) 506, 753, 771
DpnI GATC 3 cut(s) 386, 590, 862
DpnII GATC 3 cut(s) 384, 588, 860
EaeI YGGCCR 2 cut(s) 202, 805
Eam1104I CTCTTC 3 cut(s) 102, 141, 583
EarI CTCTTC 3 cut(s) 102, 141, 583
EciI GGCGGA 1 cut(s) 581
Eco130I CCWWGG 2 cut(s) 124, 693
Eco31I GGTCTC 1 cut(s) 658
Eco32I GATATC 1 cut(s) 341
Eco47I GGWCC 1 cut(s) 950
Eco57I CTGAAG 1 cut(s) 849
Eco91I GGTNACC 1 cut(s) 828
EcoNI CCTNNNNNAGG 1 cut(s) 661
EcoO65I GGTNACC 1 cut(s) 828
EcoRI GAATTC 1 cut(s) 4
EcoRII CCWGG 4 cut(s) 151, 293, 387, 584
EcoRV GATATC 1 cut(s) 341
EcoT14I CCWWGG 2 cut(s) 124, 693
ErhI CCWWGG 2 cut(s) 124, 693
FaeI CATG 5 cut(s) 398, 663, 683, 697, 950
FatI CATG 5 cut(s) 394, 659, 679, 693, 946
FauI CCCGC 1 cut(s) 850
FauNDI CATATG 1 cut(s) 648
Fnu4HI GCNGC 1 cut(s) 726
FokI GGATG 3 cut(s) 56, 568, 923
Fsp4HI GCNGC 1 cut(s) 726
FspBI CTAG 3 cut(s) 125, 366, 641
GluI GCNGC 1 cut(s) 726
GsaI CCCAGC 1 cut(s) 455
HaeIII GGCC 3 cut(s) 204, 807, 942
HapII CCGG 3 cut(s) 767, 795, 808
Hin1II CATG 5 cut(s) 398, 663, 683, 697, 950
HinfI GANTC 5 cut(s) 51, 114, 222, 322, 798
HpaII CCGG 3 cut(s) 767, 795, 808
HphI GGTGA 1 cut(s) 9
Hpy166II GTNNAC 1 cut(s) 100
Hpy188I TCNGA 4 cut(s) 221, 259, 414, 868
Hpy188III TCNNGA 2 cut(s) 280, 319
Hpy8I GTNNAC 1 cut(s) 100
HpyAV CCTTC 5 cut(s) 41, 277, 430, 489, 819
HpyCH4III ACNGT 2 cut(s) 250, 600
HpyCH4IV ACGT 1 cut(s) 300
HpyCH4V TGCA 3 cut(s) 89, 663, 728
HpyF3I CTNAG 3 cut(s) 506, 753, 771
HpySE526I ACGT 1 cut(s) 300
Hsp92II CATG 5 cut(s) 398, 663, 683, 697, 950
KpnI GGTACC 1 cut(s) 670
Kzo9I GATC 3 cut(s) 384, 588, 860
LguI GCTCTTC 1 cut(s) 141
Lsp1109I GCAGC 1 cut(s) 712
LweI GCATC 1 cut(s) 737
MaeI CTAG 3 cut(s) 125, 366, 641
MaeII ACGT 1 cut(s) 300
MaeIII GTNAC 4 cut(s) 15, 491, 828, 916
MalI GATC 3 cut(s) 386, 590, 862
MboI GATC 3 cut(s) 384, 588, 860
MboII GAAGA 5 cut(s) 119, 158, 485, 570, 855
MflI RGATCY 3 cut(s) 384, 588, 860
MhlI GDGCHC 1 cut(s) 892
MlsI TGGCCA 1 cut(s) 204
MluNI TGGCCA 1 cut(s) 204
MlyI GAGTC 2 cut(s) 231, 807
Mox20I TGGCCA 1 cut(s) 204
MscI TGGCCA 1 cut(s) 204
MseI TTAA 2 cut(s) 168, 955
Msp20I TGGCCA 1 cut(s) 204
MspI CCGG 3 cut(s) 767, 795, 808
MspR9I CCNGG 4 cut(s) 153, 295, 389, 586
Mva1269I GAATGC 1 cut(s) 399
MvaI CCWGG 4 cut(s) 153, 295, 389, 586
NcoI CCATGG 1 cut(s) 693
NdeI CATATG 1 cut(s) 648
NdeII GATC 3 cut(s) 384, 588, 860
NlaIII CATG 5 cut(s) 398, 663, 683, 697, 950
NlaIV GGNNCC 3 cut(s) 386, 590, 668
NmuCI GTSAC 2 cut(s) 15, 916
PciSI GCTCTTC 1 cut(s) 141
PcsI WCGNNNNNNNCGW 1 cut(s) 102
PctI GAATGC 1 cut(s) 399
PfeI GAWTC 3 cut(s) 51, 114, 322
PfoI TCCNGGA 1 cut(s) 584
PkrI GCNGC 1 cut(s) 727
PleI GAGTC 2 cut(s) 230, 806
PpsI GAGTC 2 cut(s) 230, 806
Psp6I CCWGG 4 cut(s) 151, 293, 387, 584
PspEI GGTNACC 1 cut(s) 828
PspFI CCCAGC 1 cut(s) 451
PspGI CCWGG 4 cut(s) 151, 293, 387, 584
PspN4I GGNNCC 3 cut(s) 386, 590, 668
PspPI GGNCC 2 cut(s) 940, 950
PsuI RGATCY 3 cut(s) 384, 588, 860
RsaI GTAC 2 cut(s) 668, 872
RsaNI GTAC 2 cut(s) 667, 871
SapI GCTCTTC 1 cut(s) 141
SaqAI TTAA 2 cut(s) 168, 955
SatI GCNGC 1 cut(s) 726
Sau3AI GATC 3 cut(s) 384, 588, 860
Sau96I GGNCC 2 cut(s) 940, 950
SchI GAGTC 2 cut(s) 231, 807
ScrFI CCNGG 4 cut(s) 153, 295, 389, 586
SduI GDGCHC 1 cut(s) 892
SfaNI GCATC 1 cut(s) 737
SfcI CTRYAG 2 cut(s) 540, 596
SinI GGWCC 1 cut(s) 950
SsiI CCGC 3 cut(s) 592, 633, 857
SspMI CTAG 3 cut(s) 125, 366, 641
StyD4I CCNGG 4 cut(s) 151, 293, 387, 584
StyI CCWWGG 2 cut(s) 124, 693
TaaI ACNGT 2 cut(s) 250, 600
TaiI ACGT 1 cut(s) 303
TaqI TCGA 3 cut(s) 105, 471, 519
TatI WGTACW 1 cut(s) 870
TfiI GAWTC 3 cut(s) 51, 114, 322
Tru1I TTAA 2 cut(s) 168, 955
Tru9I TTAA 2 cut(s) 168, 955
TscAI CASTG 1 cut(s) 493
TseFI GTSAC 2 cut(s) 15, 916
TseI GCWGC 1 cut(s) 725
Tsp45I GTSAC 2 cut(s) 15, 916
TspDTI ATGAA 6 cut(s) 17, 60, 159, 431, 541, 570
TspRI CASTG 1 cut(s) 493
VpaK11BI GGWCC 1 cut(s) 950
XagI CCTNNNNNAGG 1 cut(s) 661
XapI RAATTY 5 cut(s) 4, 30, 418, 838, 844
XmaJI CCTAGG 1 cut(s) 124
XspI CTAG 3 cut(s) 125, 366, 641
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.