FvH4_1g10354

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000147
Physical Location & Seq
Forward (+)
5652619 .. 5656094
3476 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g10354.t1

Sequence Viewer

Length: 1797 bp
ATGAATGTTGGATTATGCACTGGCCCAATACCCACCTTACTCATTTGGCAAGGGTTGGCCAACCATAATCCTTTACTTCTATCTACGGAACTGCCTTGTGATAATAGGAGTCATATTTTTCGGTCTGAAGCGGGTTGGGCCGATGAGAATGAGCCTAAACAGATTGTTGAAGAATGTTGGAAGCCTCAGACTTACTTGCCTAGCCTTGTTCAATGGAAAGCAAATCTCTCCTCTTGTAAAAAAAAACTCTGGATTTGGAGTAAAGAAAGATTCCCAATTTGTAACAAACATGAGATCAAAGAGTGTCTCCTTCAACTTGAAGAGTTACAAGGTACTGATCCATATGGTTCTTCTTCTACCCAATTGAATCTCATTAACCGGTTGGGTACACTTTGGCTGAGGGAGGAGAAATACCGACATCAAAGATCTAGAATTCGTTGGCTCTCAGTGGGTGATTCCAATACTCGTTTCTTCCACTTATCTACTTTTCATCGGAGGCAGAGGAACCAGATACTTAAGATTCAGAATGACTTTGATCAATGGATTGTTGGGGAGAAGTTTATTAGATTGGCGTTTGAGAATCAATTCCAACAGACATTTACCAGTAGTGGTTTGAGGAATTGGGGGGATTCGTTGAGGGGTGTTGCCCCTGCCACCTTCCTCAACTGTTCCAAGATATCTATGATTTTCAAAGAATACTGTTTGGCTTCAGGTCAACTTATTAGTCTTGAAAAATCAAGTATTTATTTTACTCCTAATACCTCTGATCAGATGAAGCATCTTATGAGTTTGTTGTTGGGTATCAATGGCACTGATCAACGGGGAATATATCTAGGGCTCCCAACTTTTTGGGGAAGGTCAAAAAATGGGGCTTTGGCATACATCAAAGAGAAGTTGATGAATAAGATGGATGGGTGGAAAGAAAATGTATTGACTCAAGCTGGCCAGGAAGTACTTATCAAGTCTATGGTTCTTGCTATTCCATCATACCCCATGTCCTATTTCAGATTTCCTAAAGAGGCAACAAAGGGTTATAGGGCCTCTTGGAGTTGGTCGAGACTTCTTGAAGCTAGGGATTTTATCACAAAGAATAACTACTGGCAGATTGTTTCGGGAGCCATGGTAAACATATGGACTGACTATTGGCTTCCACCAACTGACACAAATGAACCGGTTCGCCCAATTCATATTACTGGACTCATTCCGAGTCATGCTCCTATCATGGTTGAAGAGATTATTGATTGGGATCAATGTTATAAAAATCCCCGCCTAGAACCGATTAATCCCCGCCTAAGCGTGATTAAGAATTTCAGTAGCAAGAAGGATCGTCAATGGGCTCTTACCTTGGTATGTTTCTTCATCTGGTCGATCTGGAAGGCTCACTGTCGGTTTGTATACCAACACATCCCTGTTTCTCCGACCATTGTCATTCAGCTTGGTTGGGAGGCGGCTTCCGAGTTCAAGACATCGACAAAACCTACTGCTGAATCTCCTATGTTTGAACAAGTTTTGAACTGGAATCCTCCTCCAATGGATATGATTGCTATCAATTGTGATGGGAGCTGGGATAAATCTGGATTGGGGGGAAAATGTGTGGTGATTAGAAACCACATGTGTTCGTTTATGGGTGGTCTTGCTACCCCGATTCGCGGTAGCTCAGTAGAGGCTGTGGAGGCGCTAGCCATTCTAGCTAGCGTCAGTCTCGCCGTTGATATGAACCTGAAAGCAGTCCAAGTTCAATCAGATTCACAATCAGTCATCTTAGATCTAAATTCTCTTGCCACATGCAATAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

599

Amino Acids

68.43

Weight (kDa)

8.82

Isoelectric Point (pI)

40.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_3 PF13456 517 - 594 7.4e-08 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000147)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10354 FvH4_1g17131 FvH4_2g11611 FvH4_2g33851 FvH4_3g32112 FvH4_3g35052 FvH4_3g44611 FvH4_4g05921 FvH4_4g06411 FvH4_4g06792 FvH4_4g10365 FvH4_4g21422 FvH4_4g22401 FvH4_4g30261 FvH4_5g08843 FvH4_5g14731 FvH4_5g24781 FvH4_5g26231 FvH4_5g31282 FvH4_6g23371 FvH4_6g38511 FvH4_7g01171 FvH4_7g03341 FvH4_7g06171 FvH4_7g32472
prunus_persica Prupe.2G036900_v2.0.a1
pyrus_communis pycom02g19900 pycom03g01520 pycom05g10510 pycom16g23820
rosa_chinensis RchiOBHm_Chr1g0316031 RchiOBHm_Chr1g0342451 RchiOBHm_Chr1g0344541 RchiOBHm_Chr1g0364721 RchiOBHm_Chr2g0133541 RchiOBHm_Chr2g0134511 RchiOBHm_Chr2g0145891 RchiOBHm_Chr2g0163241 RchiOBHm_Chr5g0027201 RchiOBHm_Chr5g0027881 RchiOBHm_Chr5g0047471 RchiOBHm_Chr7g0210901
rosa_laevigata RLG00000011116 RLG00000017964 RLG00000018128 RLG00000018387 RLG00000018829 RLG00000019353 RLG00000028973 RLG00000035870 RLG00000036629
rosa_multiflora Rmu_co8126340.1_g000001 Rmu_co8216750.1_g000001 Rmu_co8222072.1_g000001 Rmu_co8332453.1_g000001 Rmu_co8349913.1_g000001 Rmu_co8405337.1_g000001 Rmu_sc0000041.1_g000012 Rmu_sc0000166.1_g000029 Rmu_sc0000251.1_g000019 Rmu_sc0000271.1_g000028 Rmu_sc0000509.1_g000036 Rmu_sc0000543.1_g000048 Rmu_sc0000808.1_g000003 Rmu_sc0000847.1_g000040 Rmu_sc0000972.1_g000020 Rmu_sc0001260.1_g000001 Rmu_sc0001464.1_g000026 Rmu_sc0001616.1_g000003 Rmu_sc0001669.1_g000001 Rmu_sc0002005.1_g000001 Rmu_sc0002014.1_g000010 Rmu_sc0002082.1_g000033 Rmu_sc0002302.1_g000024 Rmu_sc0002531.1_g000045 Rmu_sc0003276.1_g000002 Rmu_sc0003737.1_g000007 Rmu_sc0003832.1_g000022 Rmu_sc0004080.1_g000011 Rmu_sc0004487.1_g000009 Rmu_sc0004988.1_g000018 Rmu_sc0004988.1_g000019 Rmu_sc0005254.1_g000002 Rmu_sc0005733.1_g000004 Rmu_sc0006413.1_g000006 Rmu_sc0007121.1_g000013 Rmu_sc0007869.1_g000006 Rmu_sc0008035.1_g000015 Rmu_sc0008279.1_g000017 Rmu_sc0008351.1_g000014 Rmu_sc0008957.1_g000007 Rmu_sc0009012.1_g000007 Rmu_sc0010556.1_g000009 Rmu_sc0012889.1_g000003 Rmu_sc0019808.1_g000004 Rmu_sc0028113.1_g000001 Rmu_sc0031202.1_g000001 Rmu_sc0034436.1_g000001 Rmu_sc0034445.1_g000001 Rmu_sc0040044.1_g000001 Rmu_ssc0000062.1_g000032 Rmu_ssc0000372.1_g000018
rosa_roxburghii Rroxscaffold_1G00001520 Rroxscaffold_1G00039990 Rroxscaffold_1G00046370 Rroxscaffold_2G00110140 Rroxscaffold_2G00131420 Rroxscaffold_3G00222390 Rroxscaffold_5G00336040 Rroxscaffold_5G00338000 Rroxscaffold_5G00344030 Rroxscaffold_5G00363460 Rroxscaffold_6G00402000 Rroxscaffold_7G00194940
rosa_rugosa Rorug01G0106500 Rorug01G0111300 Rorug01G0247000 Rorug02G0318100.1 Rorug02G0318200 Rorug02G0459500 Rorug03G0108100 Rorug03G0200500 Rorug03G0232500 Rorug03G0240600 Rorug04G0105300 Rorug04G0256600 Rorug06G0079300 Rorug06G0082700 Rorug06G0095600 Rorug06G0179000 Rorug07G0113500 Rorug07G0271100
rosa_samantha Rh1AG087200 Rh1CG085300 Rh1DG013200 Rh1DG091700 Rh1DG091800 Rh1DG338300 Rh2AG375400 Rh2AG407000 Rh2AG513500 Rh2BG277700 Rh2BG371200 Rh2BG376100 Rh2BG580500 Rh2CG354300 Rh2DG200100 Rh2DG388000 Rh2DG393500 Rh2DG426400 Rh3CG304800 Rh4AG044600 Rh4AG220500 Rh4BG379300 Rh4CG007100 Rh4CG030300 Rh4CG038000 Rh4CG114900 Rh4CG393700 Rh5AG124900 Rh5AG342300 Rh5BG414400 Rh5CG263800 Rh5CG439000 Rh5DG231100 Rh5DG566900 Rh6AG138600 Rh6AG200000 Rh6AG253100 Rh6AG390900 Rh6AG441600 Rh6BG194700 Rh6BG225800 Rh6BG256100 Rh6CG231700 Rh6CG231900 Rh6CG312200 Rh6CG453700 Rh6DG219400 Rh7AG357700 Rh7AG442000 Rh7CG425700 Rh7CG474600 Rh7CG494100 Rh7DG253900 Rh7DG294700 Rh7DG401600 Rh7DG461300
rosa_wichuraiana Rw1G001190 Rw2G047020 Rw4G003490 Rw5G039690 Rw6G010450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1257
AccI GTMKAC 1 cut(s) 1395
AccII CGCG 1 cut(s) 1650
AciI CCGC 5 cut(s) 131, 1267, 1288, 1448, 1650
AclWI GGATC 3 cut(s) 332, 1254, 1332
AcoI YGGCCR 2 cut(s) 57, 943
AcsI RAATTY 3 cut(s) 432, 1306, 1771
AcuI CTGAAG 2 cut(s) 147, 693
AfaI GTAC 3 cut(s) 334, 388, 954
AfiI CCNNNNNNNGG 1 cut(s) 1649
AflII CTTAAG 1 cut(s) 515
AflIII ACRYGT 1 cut(s) 1611
AgeI ACCGGT 2 cut(s) 378, 1171
AjnI CCWGG 1 cut(s) 945
AjuI GAANNNNNNNTTGG 2 cut(s) 452, 484
AluBI AGCT 6 cut(s) 941, 1070, 1435, 1563, 1656, 1691
AluI AGCT 6 cut(s) 941, 1070, 1435, 1563, 1656, 1691
Alw26I GTCTC 3 cut(s) 311, 1051, 1706
AlwI GGATC 3 cut(s) 332, 1254, 1332
AoxI GGCC 5 cut(s) 22, 57, 138, 943, 1038
ApoI RAATTY 3 cut(s) 432, 1306, 1771
AseI ATTAAT 1 cut(s) 1281
AsiGI ACCGGT 2 cut(s) 378, 1171
Asp700I GAANNNNTTC 2 cut(s) 584, 1173
AspLEI GCGC 1 cut(s) 1678
AspS9I GGNCC 3 cut(s) 23, 138, 1038
AsuHPI GGTGA 2 cut(s) 464, 1609
AsuNHI GCTAGC 2 cut(s) 1678, 1691
BalI TGGCCA 2 cut(s) 59, 945
BanII GRGCYC 2 cut(s) 840, 1339
BbvCI CCTCAGC 1 cut(s) 398
BccI CCATC 4 cut(s) 901, 905, 991, 1550
BceAI ACGGC 1 cut(s) 1691
BciT130I CCWGG 1 cut(s) 947
BclI TGATCA 3 cut(s) 535, 766, 814
BcoDI GTCTC 3 cut(s) 311, 1051, 1706
BfaI CTAG 8 cut(s) 201, 429, 833, 1071, 1271, 1679, 1688, 1692
BfoI RGCGCY 1 cut(s) 1679
BfrI CTTAAG 1 cut(s) 515
BglII AGATCT 2 cut(s) 425, 1765
BisI GCNGC 1 cut(s) 1449
BlsI GCNGC 1 cut(s) 1450
BmcAI AGTACT 1 cut(s) 954
Bme1390I CCNGG 1 cut(s) 947
BmgT120I GGNCC 3 cut(s) 23, 138, 1038
BmiI GGNNCC 3 cut(s) 506, 839, 1117
BmrFI CCNGG 1 cut(s) 947
BmsI GCATC 1 cut(s) 787
BmtI GCTAGC 2 cut(s) 1682, 1695
BoxI GACNNNNGTC 1 cut(s) 1424
BplI GAGNNNNNCTC 2 cut(s) 1198, 1230
Bpu10I CCTNAGC 2 cut(s) 398, 1292
BpuEI CTTGAG 1 cut(s) 921
BsaBI GATNNNNATC 2 cut(s) 1245, 1544
BsaJI CCNNGG 2 cut(s) 1119, 1344
BsaWI WCCGGW 2 cut(s) 378, 1171
BsaXI ACNNNNNCTCC 2 cut(s) 1107, 1137
Bsc4I CCNNNNNNNGG 1 cut(s) 1649
Bse118I RCCGGY 2 cut(s) 378, 1171
Bse1I ACTGG 5 cut(s) 25, 603, 1103, 1198, 1520
Bse8I GATNNNNATC 2 cut(s) 1245, 1544
BseBI CCWGG 1 cut(s) 947
BseDI CCNNGG 2 cut(s) 1119, 1344
BseGI GGATG 2 cut(s) 916, 1404
BseJI GATNNNNATC 2 cut(s) 1245, 1544
BseLI CCNNNNNNNGG 1 cut(s) 1649
BseMII CTCAG 4 cut(s) 200, 389, 459, 1671
BseNI ACTGG 5 cut(s) 25, 603, 1103, 1198, 1520
BseRI GAGGAG 3 cut(s) 220, 419, 1515
BseYI CCCAGC 1 cut(s) 1563
Bsh1236I CGCG 1 cut(s) 1650
BshFI GGCC 5 cut(s) 24, 59, 140, 945, 1040
BshTI ACCGGT 2 cut(s) 378, 1171
BsiSI CCGG 2 cut(s) 379, 1172
BslI CCNNNNNNNGG 1 cut(s) 1649
BsmAI GTCTC 3 cut(s) 311, 1051, 1706
BsnI GGCC 5 cut(s) 24, 59, 140, 945, 1040
Bsp1286I GDGCHC 2 cut(s) 840, 1339
Bsp19I CCATGG 1 cut(s) 1119
BspACI CCGC 5 cut(s) 131, 1267, 1288, 1448, 1650
BspANI GGCC 5 cut(s) 24, 59, 140, 945, 1040
BspCNI CTCAG 4 cut(s) 199, 390, 458, 1670
BspFNI CGCG 1 cut(s) 1650
BspLI GGNNCC 3 cut(s) 506, 839, 1117
BspOI GCTAGC 2 cut(s) 1682, 1695
BspPI GGATC 3 cut(s) 332, 1254, 1332
BspTI CTTAAG 1 cut(s) 515
BsrFI RCCGGY 2 cut(s) 378, 1171
BsrI ACTGG 5 cut(s) 25, 603, 1103, 1198, 1520
BssAI RCCGGY 2 cut(s) 378, 1171
BssECI CCNNGG 2 cut(s) 1119, 1344
BssNAI GTATAC 1 cut(s) 1396
BssT1I CCWWGG 2 cut(s) 1119, 1344
Bst1107I GTATAC 1 cut(s) 1396
Bst2UI CCWGG 1 cut(s) 947
Bst4CI ACNGT 3 cut(s) 668, 701, 1385
Bst6I CTCTTC 2 cut(s) 315, 1224
BstAFI CTTAAG 1 cut(s) 515
BstC8I GCNNGC 3 cut(s) 943, 1680, 1693
BstDEI CTNAG 6 cut(s) 186, 398, 445, 1292, 1657, 1762
BstDSI CCRYGG 1 cut(s) 1119
BstF5I GGATG 2 cut(s) 916, 1404
BstFNI CGCG 1 cut(s) 1650
BstH2I RGCGCY 1 cut(s) 1679
BstHHI GCGC 1 cut(s) 1678
BstMAI GTCTC 3 cut(s) 311, 1051, 1706
BstMWI GCNNNNNNNGC 3 cut(s) 137, 1673, 1688
BstNI CCWGG 1 cut(s) 947
BstNSI RCATGY 2 cut(s) 1615, 1788
BstPAI GACNNNNGTC 1 cut(s) 1424
BstSCI CCNGG 1 cut(s) 945
BstUI CGCG 1 cut(s) 1650
BstX2I RGATCY 2 cut(s) 425, 1765
BstXI CCANNNNNNTGG 1 cut(s) 849
BstYI RGATCY 2 cut(s) 425, 1765
BstZ17I GTATAC 1 cut(s) 1396
BsuRI GGCC 5 cut(s) 24, 59, 140, 945, 1040
BtgI CCRYGG 1 cut(s) 1119
BtsCI GGATG 2 cut(s) 916, 1404
BtsIMutI CAGTG 4 cut(s) 18, 453, 810, 1381
Cac8I GCNNGC 3 cut(s) 943, 1680, 1693
CfoI GCGC 1 cut(s) 1678
Cfr10I RCCGGY 2 cut(s) 378, 1171
Cfr13I GGNCC 3 cut(s) 23, 138, 1038
CseI GACGC 1 cut(s) 1684
Csp6I GTAC 3 cut(s) 333, 387, 953
CspAI ACCGGT 2 cut(s) 378, 1171
CviAII CATG 7 cut(s) 290, 994, 1120, 1211, 1222, 1612, 1785
CviQI GTAC 3 cut(s) 333, 387, 953
DdeI CTNAG 6 cut(s) 186, 398, 445, 1292, 1657, 1762
EaeI YGGCCR 2 cut(s) 57, 943
Eam1104I CTCTTC 2 cut(s) 315, 1224
EarI CTCTTC 2 cut(s) 315, 1224
Eco130I CCWWGG 2 cut(s) 1119, 1344
Eco24I GRGCYC 2 cut(s) 840, 1339
Eco32I GATATC 1 cut(s) 678
Eco57I CTGAAG 2 cut(s) 147, 693
EcoO109I RGGNCCY 1 cut(s) 1038
EcoRI GAATTC 1 cut(s) 432
EcoRII CCWGG 1 cut(s) 945
EcoRV GATATC 1 cut(s) 678
EcoT14I CCWWGG 2 cut(s) 1119, 1344
EcoT38I GRGCYC 2 cut(s) 840, 1339
ErhI CCWWGG 2 cut(s) 1119, 1344
FaeI CATG 7 cut(s) 293, 997, 1123, 1214, 1225, 1615, 1788
FatI CATG 7 cut(s) 289, 993, 1119, 1210, 1221, 1611, 1784
FauI CCCGC 3 cut(s) 124, 1274, 1295
FauNDI CATATG 2 cut(s) 343, 1130
FbaI TGATCA 3 cut(s) 535, 766, 814
FblI GTMKAC 1 cut(s) 1395
Fnu4HI GCNGC 1 cut(s) 1449
FokI GGATG 2 cut(s) 923, 1391
FriOI GRGCYC 2 cut(s) 840, 1339
Fsp4HI GCNGC 1 cut(s) 1449
FspBI CTAG 8 cut(s) 201, 429, 833, 1071, 1271, 1679, 1688, 1692
GlaI GCGC 1 cut(s) 1677
GluI GCNGC 1 cut(s) 1449
GsaI CCCAGC 1 cut(s) 1567
HaeII RGCGCY 1 cut(s) 1679
HaeIII GGCC 5 cut(s) 24, 59, 140, 945, 1040
HapII CCGG 2 cut(s) 379, 1172
HgaI GACGC 1 cut(s) 1684
HhaI GCGC 1 cut(s) 1678
Hin1II CATG 7 cut(s) 293, 997, 1123, 1214, 1225, 1615, 1788
Hin6I GCGC 1 cut(s) 1676
HinP1I GCGC 1 cut(s) 1676
HincII GTYRAC 1 cut(s) 716
HindII GTYRAC 1 cut(s) 716
HpaII CCGG 2 cut(s) 379, 1172
HphI GGTGA 2 cut(s) 464, 1609
Hpy166II GTNNAC 4 cut(s) 389, 716, 1126, 1396
Hpy188III TCNNGA 9 cut(s) 250, 429, 728, 1056, 1064, 1113, 1372, 1462, 1575
Hpy8I GTNNAC 4 cut(s) 389, 716, 1126, 1396
HpyAV CCTTC 5 cut(s) 320, 667, 849, 1315, 1369
HpyCH4III ACNGT 3 cut(s) 668, 701, 1385
HpyCH4V TGCA 2 cut(s) 18, 1788
HpyF10VI GCNNNNNNNGC 3 cut(s) 137, 1673, 1688
HpyF3I CTNAG 6 cut(s) 186, 398, 445, 1292, 1657, 1762
Hsp92II CATG 7 cut(s) 293, 997, 1123, 1214, 1225, 1615, 1788
HspAI GCGC 1 cut(s) 1676
Ksp22I TGATCA 3 cut(s) 535, 766, 814
LmnI GCTCC 4 cut(s) 843, 1115, 1219, 1560
LweI GCATC 1 cut(s) 787
MaeI CTAG 8 cut(s) 201, 429, 833, 1071, 1271, 1679, 1688, 1692
MaeIII GTNAC 2 cut(s) 281, 324
MboII GAAGA 7 cut(s) 182, 332, 342, 345, 463, 1241, 1348
MfeI CAATTG 2 cut(s) 362, 1549
MflI RGATCY 2 cut(s) 425, 1765
MhlI GDGCHC 2 cut(s) 840, 1339
MlsI TGGCCA 2 cut(s) 59, 945
MluNI TGGCCA 2 cut(s) 59, 945
MlyI GAGTC 4 cut(s) 118, 928, 1191, 1216
MmeI TCCRAC 3 cut(s) 158, 613, 1442
Mox20I TGGCCA 2 cut(s) 59, 945
MroXI GAANNNNTTC 2 cut(s) 584, 1173
MscI TGGCCA 2 cut(s) 59, 945
MseI TTAA 4 cut(s) 375, 516, 1281, 1302
Msp20I TGGCCA 2 cut(s) 59, 945
MspCI CTTAAG 1 cut(s) 515
MspI CCGG 2 cut(s) 379, 1172
MspR9I CCNGG 1 cut(s) 947
MunI CAATTG 2 cut(s) 362, 1549
MvaI CCWGG 1 cut(s) 947
MvnI CGCG 1 cut(s) 1650
MwoI GCNNNNNNNGC 3 cut(s) 137, 1673, 1688
NcoI CCATGG 1 cut(s) 1119
NdeI CATATG 2 cut(s) 343, 1130
NheI GCTAGC 2 cut(s) 1678, 1691
NlaIII CATG 7 cut(s) 293, 997, 1123, 1214, 1225, 1615, 1788
NlaIV GGNNCC 3 cut(s) 506, 839, 1117
NspI RCATGY 2 cut(s) 1615, 1788
PciI ACATGT 1 cut(s) 1611
PdmI GAANNNNTTC 2 cut(s) 584, 1173
PinAI ACCGGT 2 cut(s) 378, 1171
PkrI GCNGC 1 cut(s) 1450
PleI GAGTC 4 cut(s) 117, 928, 1191, 1215
PpsI GAGTC 4 cut(s) 117, 928, 1191, 1215
PscI ACATGT 1 cut(s) 1611
PshAI GACNNNNGTC 1 cut(s) 1424
PshBI ATTAAT 1 cut(s) 1281
PsiI TTATAA 1 cut(s) 1257
Psp6I CCWGG 1 cut(s) 945
PspFI CCCAGC 1 cut(s) 1563
PspGI CCWGG 1 cut(s) 945
PspN4I GGNNCC 3 cut(s) 506, 839, 1117
PspPI GGNCC 3 cut(s) 23, 138, 1038
PsuI RGATCY 2 cut(s) 425, 1765
RsaI GTAC 3 cut(s) 334, 388, 954
RsaNI GTAC 3 cut(s) 333, 387, 953
SaqAI TTAA 4 cut(s) 375, 516, 1281, 1302
SatI GCNGC 1 cut(s) 1449
Sau96I GGNCC 3 cut(s) 23, 138, 1038
ScaI AGTACT 1 cut(s) 954
SchI GAGTC 4 cut(s) 118, 928, 1191, 1216
ScrFI CCNGG 1 cut(s) 947
SduI GDGCHC 2 cut(s) 840, 1339
SfaNI GCATC 1 cut(s) 787
SmlI CTYRAG 2 cut(s) 515, 936
SmoI CTYRAG 2 cut(s) 515, 936
SsiI CCGC 5 cut(s) 131, 1267, 1288, 1448, 1650
SspMI CTAG 8 cut(s) 201, 429, 833, 1071, 1271, 1679, 1688, 1692
StyD4I CCNGG 1 cut(s) 945
StyI CCWWGG 2 cut(s) 1119, 1344
TaaI ACNGT 3 cut(s) 668, 701, 1385
TaqI TCGA 3 cut(s) 1055, 1367, 1469
TaqII GACCGA 1 cut(s) 111
TatI WGTACW 1 cut(s) 952
TauI GCSGC 1 cut(s) 1451
Tru1I TTAA 4 cut(s) 375, 516, 1281, 1302
Tru9I TTAA 4 cut(s) 375, 516, 1281, 1302
TscAI CASTG 4 cut(s) 25, 453, 817, 1388
TspDTI ATGAA 8 cut(s) 17, 479, 788, 914, 1175, 1182, 1348, 1730
TspGWI ACGGA 1 cut(s) 101
TspRI CASTG 4 cut(s) 25, 453, 817, 1388
Vha464I CTTAAG 1 cut(s) 515
VspI ATTAAT 1 cut(s) 1281
XapI RAATTY 3 cut(s) 432, 1306, 1771
XbaI TCTAGA 1 cut(s) 428
XceI RCATGY 2 cut(s) 1615, 1788
XmiI GTMKAC 1 cut(s) 1395
XmnI GAANNNNTTC 2 cut(s) 584, 1173
XspI CTAG 8 cut(s) 201, 429, 833, 1071, 1271, 1679, 1688, 1692
ZrmI AGTACT 1 cut(s) 954
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.