ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 96 |
| AciI | CCGC | 1 cut(s) | 94 |
| AclWI | GGATC | 1 cut(s) | 263 |
| AcoI | YGGCCR | 1 cut(s) | 143 |
| AcsI | RAATTY | 1 cut(s) | 12 |
| AfaI | GTAC | 1 cut(s) | 149 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 176, 335 |
| AgsI | TTSAA | 1 cut(s) | 251 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 163, 195 |
| AluBI | AGCT | 2 cut(s) | 246, 254 |
| AluI | AGCT | 2 cut(s) | 246, 254 |
| Alw21I | GWGCWC | 1 cut(s) | 140 |
| Alw26I | GTCTC | 1 cut(s) | 94 |
| Alw44I | GTGCAC | 1 cut(s) | 136 |
| AlwI | GGATC | 1 cut(s) | 263 |
| AoxI | GGCC | 4 cut(s) | 21, 43, 143, 229 |
| ApaLI | GTGCAC | 1 cut(s) | 136 |
| ApoI | RAATTY | 1 cut(s) | 12 |
| AspS9I | GGNCC | 3 cut(s) | 44, 230, 304 |
| AsuHPI | GGTGA | 1 cut(s) | 21 |
| AvaII | GGWCC | 1 cut(s) | 304 |
| BaeGI | GKGCMC | 1 cut(s) | 140 |
| Bbv12I | GWGCWC | 1 cut(s) | 140 |
| BccI | CCATC | 1 cut(s) | 32 |
| BceAI | ACGGC | 1 cut(s) | 130 |
| BcoDI | GTCTC | 1 cut(s) | 94 |
| BfaI | CTAG | 1 cut(s) | 104 |
| Bme18I | GGWCC | 1 cut(s) | 304 |
| BmgT120I | GGNCC | 3 cut(s) | 44, 230, 304 |
| BmiI | GGNNCC | 3 cut(s) | 46, 181, 232 |
| BmsI | GCATC | 1 cut(s) | 220 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 11, 43 |
| BsaJI | CCNNGG | 1 cut(s) | 215 |
| BsaWI | WCCGGW | 1 cut(s) | 196 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 300, 330 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 176, 335 |
| Bse3DI | GCAATG | 2 cut(s) | 127, 187 |
| BseDI | CCNNGG | 1 cut(s) | 215 |
| BseGI | GGATG | 3 cut(s) | 88, 90, 211 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 176, 335 |
| BseMI | GCAATG | 2 cut(s) | 127, 187 |
| BseRI | GAGGAG | 1 cut(s) | 305 |
| BseSI | GKGCMC | 1 cut(s) | 140 |
| Bsh1236I | CGCG | 1 cut(s) | 96 |
| BshFI | GGCC | 4 cut(s) | 23, 45, 145, 231 |
| BsiHKAI | GWGCWC | 1 cut(s) | 140 |
| BsiSI | CCGG | 1 cut(s) | 197 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 176, 335 |
| BsmAI | GTCTC | 1 cut(s) | 94 |
| BsnI | GGCC | 4 cut(s) | 23, 45, 145, 231 |
| Bsp1286I | GDGCHC | 1 cut(s) | 140 |
| Bsp143I | GATC | 4 cut(s) | 85, 184, 237, 268 |
| BspACI | CCGC | 1 cut(s) | 94 |
| BspANI | GGCC | 4 cut(s) | 23, 45, 145, 231 |
| BspFNI | CGCG | 1 cut(s) | 96 |
| BspLI | GGNNCC | 3 cut(s) | 46, 181, 232 |
| BspPI | GGATC | 1 cut(s) | 263 |
| BsrDI | GCAATG | 2 cut(s) | 127, 187 |
| BssECI | CCNNGG | 1 cut(s) | 215 |
| BssMI | GATC | 4 cut(s) | 85, 184, 237, 268 |
| BstDSI | CCRYGG | 1 cut(s) | 215 |
| BstF5I | GGATG | 3 cut(s) | 88, 90, 211 |
| BstFNI | CGCG | 1 cut(s) | 96 |
| BstKTI | GATC | 4 cut(s) | 88, 187, 240, 271 |
| BstMAI | GTCTC | 1 cut(s) | 94 |
| BstMBI | GATC | 4 cut(s) | 85, 184, 237, 268 |
| BstSLI | GKGCMC | 1 cut(s) | 140 |
| BstUI | CGCG | 1 cut(s) | 96 |
| BsuRI | GGCC | 4 cut(s) | 23, 45, 145, 231 |
| BtgI | CCRYGG | 1 cut(s) | 215 |
| BtgZI | GCGATG | 1 cut(s) | 273 |
| BtsCI | GGATG | 3 cut(s) | 88, 90, 211 |
| Cfr13I | GGNCC | 3 cut(s) | 44, 230, 304 |
| Csp6I | GTAC | 1 cut(s) | 148 |
| CviAII | CATG | 4 cut(s) | 57, 141, 164, 235 |
| CviJI | RGCY | 6 cut(s) | 23, 45, 145, 231, 246, 254 |
| CviKI_1 | RGCY | 6 cut(s) | 23, 45, 145, 231, 246, 254 |
| CviQI | GTAC | 1 cut(s) | 148 |
| DpnI | GATC | 4 cut(s) | 87, 186, 239, 270 |
| DpnII | GATC | 4 cut(s) | 85, 184, 237, 268 |
| EaeI | YGGCCR | 1 cut(s) | 143 |
| Eco47I | GGWCC | 1 cut(s) | 304 |
| EcoO109I | RGGNCCY | 1 cut(s) | 230 |
| FaeI | CATG | 4 cut(s) | 60, 144, 167, 238 |
| FaiI | YATR | 5 cut(s) | 58, 142, 161, 165, 236 |
| FatI | CATG | 4 cut(s) | 56, 140, 163, 234 |
| FokI | GGATG | 3 cut(s) | 77, 95, 198 |
| FspBI | CTAG | 1 cut(s) | 104 |
| HaeIII | GGCC | 4 cut(s) | 23, 45, 145, 231 |
| HapII | CCGG | 1 cut(s) | 197 |
| Hin1II | CATG | 4 cut(s) | 60, 144, 167, 238 |
| HindIII | AAGCTT | 1 cut(s) | 252 |
| HinfI | GANTC | 1 cut(s) | 339 |
| HpaII | CCGG | 1 cut(s) | 197 |
| HphI | GGTGA | 1 cut(s) | 21 |
| Hpy166II | GTNNAC | 2 cut(s) | 54, 138 |
| Hpy188I | TCNGA | 3 cut(s) | 184, 273, 320 |
| Hpy8I | GTNNAC | 2 cut(s) | 54, 138 |
| HpyAV | CCTTC | 1 cut(s) | 335 |
| HpyCH4V | TGCA | 2 cut(s) | 125, 138 |
| Hsp92II | CATG | 4 cut(s) | 60, 144, 167, 238 |
| Kzo9I | GATC | 4 cut(s) | 85, 184, 237, 268 |
| LpnPI | CCDG | 2 cut(s) | 94, 210 |
| LweI | GCATC | 1 cut(s) | 220 |
| MaeI | CTAG | 1 cut(s) | 104 |
| MalI | GATC | 4 cut(s) | 87, 186, 239, 270 |
| MboI | GATC | 4 cut(s) | 85, 184, 237, 268 |
| MboII | GAAGA | 1 cut(s) | 292 |
| MhlI | GDGCHC | 1 cut(s) | 140 |
| MluCI | AATT | 1 cut(s) | 12 |
| MlyI | GAGTC | 1 cut(s) | 333 |
| MmeI | TCCRAC | 2 cut(s) | 279, 343 |
| MnlI | CCTC | 5 cut(s) | 13, 204, 295, 323, 326 |
| MspI | CCGG | 1 cut(s) | 197 |
| MvnI | CGCG | 1 cut(s) | 96 |
| NdeII | GATC | 4 cut(s) | 85, 184, 237, 268 |
| NlaIII | CATG | 4 cut(s) | 60, 144, 167, 238 |
| NlaIV | GGNNCC | 3 cut(s) | 46, 181, 232 |
| NmeAIII | GCCGAG | 1 cut(s) | 21 |
| PleI | GAGTC | 1 cut(s) | 333 |
| PpsI | GAGTC | 1 cut(s) | 333 |
| PspN4I | GGNNCC | 3 cut(s) | 46, 181, 232 |
| PspPI | GGNCC | 3 cut(s) | 44, 230, 304 |
| RsaI | GTAC | 1 cut(s) | 149 |
| RsaNI | GTAC | 1 cut(s) | 148 |
| Sau3AI | GATC | 4 cut(s) | 85, 184, 237, 268 |
| Sau96I | GGNCC | 3 cut(s) | 44, 230, 304 |
| SchI | GAGTC | 1 cut(s) | 333 |
| SduI | GDGCHC | 1 cut(s) | 140 |
| SetI | ASST | 4 cut(s) | 34, 248, 256, 315 |
| SfaNI | GCATC | 1 cut(s) | 220 |
| SinI | GGWCC | 1 cut(s) | 304 |
| Sse9I | AATT | 1 cut(s) | 12 |
| SsiI | CCGC | 1 cut(s) | 94 |
| SspMI | CTAG | 1 cut(s) | 104 |
| TaqII | GACCGA | 1 cut(s) | 321 |
| TasI | AATT | 1 cut(s) | 12 |
| TspDTI | ATGAA | 1 cut(s) | 180 |
| TspGWI | ACGGA | 1 cut(s) | 95 |
| VneI | GTGCAC | 1 cut(s) | 136 |
| VpaK11BI | GGWCC | 1 cut(s) | 304 |
| XapI | RAATTY | 1 cut(s) | 12 |
| XspI | CTAG | 1 cut(s) | 104 |