Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 95 |
| AccI | GTMKAC | 1 cut(s) | 275 |
| AfaI | GTAC | 2 cut(s) | 244, 369 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 95, 164 |
| AflII | CTTAAG | 1 cut(s) | 269 |
| AgsI | TTSAA | 2 cut(s) | 266, 392 |
| AhlI | ACTAGT | 1 cut(s) | 374 |
| AjnI | CCWGG | 1 cut(s) | 21 |
| AluBI | AGCT | 2 cut(s) | 8, 30 |
| AluI | AGCT | 2 cut(s) | 8, 30 |
| Alw26I | GTCTC | 2 cut(s) | 115, 302 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 33 |
| AspS9I | GGNCC | 2 cut(s) | 111, 152 |
| AsuHPI | GGTGA | 2 cut(s) | 67, 78 |
| AvaII | GGWCC | 2 cut(s) | 111, 152 |
| BccI | CCATC | 1 cut(s) | 186 |
| BciT130I | CCWGG | 1 cut(s) | 23 |
| BciVI | GTATCC | 1 cut(s) | 313 |
| BcoDI | GTCTC | 2 cut(s) | 115, 302 |
| BcuI | ACTAGT | 1 cut(s) | 374 |
| BfaI | CTAG | 2 cut(s) | 375, 395 |
| BfrI | CTTAAG | 1 cut(s) | 269 |
| BfuI | GTATCC | 1 cut(s) | 313 |
| BmcAI | AGTACT | 1 cut(s) | 244 |
| Bme1390I | CCNGG | 1 cut(s) | 23 |
| Bme18I | GGWCC | 2 cut(s) | 111, 152 |
| BmgT120I | GGNCC | 2 cut(s) | 111, 152 |
| BmiI | GGNNCC | 1 cut(s) | 112 |
| BmrFI | CCNGG | 1 cut(s) | 23 |
| BpmI | CTGGAG | 2 cut(s) | 22, 117 |
| BsaI | GGTCTC | 1 cut(s) | 302 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 95, 164 |
| Bse1I | ACTGG | 2 cut(s) | 39, 100 |
| BseBI | CCWGG | 1 cut(s) | 23 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 95, 164 |
| BseNI | ACTGG | 2 cut(s) | 39, 100 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 95, 164 |
| BsmAI | GTCTC | 2 cut(s) | 115, 302 |
| BsmI | GAATGC | 1 cut(s) | 46 |
| Bso31I | GGTCTC | 1 cut(s) | 302 |
| Bsp1407I | TGTACA | 1 cut(s) | 367 |
| Bsp143I | GATC | 1 cut(s) | 14 |
| BspLI | GGNNCC | 1 cut(s) | 112 |
| BspTI | CTTAAG | 1 cut(s) | 269 |
| BspTNI | GGTCTC | 1 cut(s) | 302 |
| BsrGI | TGTACA | 1 cut(s) | 367 |
| BsrI | ACTGG | 2 cut(s) | 39, 100 |
| BssMI | GATC | 1 cut(s) | 14 |
| BssNAI | GTATAC | 1 cut(s) | 276 |
| Bst1107I | GTATAC | 1 cut(s) | 276 |
| Bst2UI | CCWGG | 1 cut(s) | 23 |
| Bst4CI | ACNGT | 1 cut(s) | 353 |
| BstAFI | CTTAAG | 1 cut(s) | 269 |
| BstAUI | TGTACA | 1 cut(s) | 367 |
| BstKTI | GATC | 1 cut(s) | 17 |
| BstMAI | GTCTC | 2 cut(s) | 115, 302 |
| BstMBI | GATC | 1 cut(s) | 14 |
| BstNI | CCWGG | 1 cut(s) | 23 |
| BstSCI | CCNGG | 1 cut(s) | 21 |
| BstZ17I | GTATAC | 1 cut(s) | 276 |
| BsuI | GTATCC | 1 cut(s) | 313 |
| CaiI | CAGNNNCTG | 1 cut(s) | 33 |
| Cfr13I | GGNCC | 2 cut(s) | 111, 152 |
| Csp6I | GTAC | 2 cut(s) | 243, 368 |
| CviJI | RGCY | 2 cut(s) | 8, 30 |
| CviKI_1 | RGCY | 2 cut(s) | 8, 30 |
| CviQI | GTAC | 2 cut(s) | 243, 368 |
| DpnI | GATC | 1 cut(s) | 16 |
| DpnII | GATC | 1 cut(s) | 14 |
| Eco31I | GGTCTC | 1 cut(s) | 302 |
| Eco47I | GGWCC | 2 cut(s) | 111, 152 |
| EcoO109I | RGGNCCY | 1 cut(s) | 111 |
| EcoRII | CCWGG | 1 cut(s) | 21 |
| FaiI | YATR | 5 cut(s) | 187, 192, 276, 372, 380 |
| FblI | GTMKAC | 1 cut(s) | 275 |
| FspBI | CTAG | 2 cut(s) | 375, 395 |
| GsuI | CTGGAG | 2 cut(s) | 22, 117 |
| HindIII | AAGCTT | 1 cut(s) | 6 |
| HinfI | GANTC | 1 cut(s) | 58 |
| HphI | GGTGA | 2 cut(s) | 67, 78 |
| Hpy166II | GTNNAC | 1 cut(s) | 276 |
| Hpy188I | TCNGA | 1 cut(s) | 75 |
| Hpy188III | TCNNGA | 2 cut(s) | 12, 236 |
| Hpy8I | GTNNAC | 1 cut(s) | 276 |
| HpyCH4III | ACNGT | 1 cut(s) | 353 |
| Kzo9I | GATC | 1 cut(s) | 14 |
| LmnI | GCTCC | 1 cut(s) | 41 |
| LpnPI | CCDG | 6 cut(s) | 8, 35, 52, 81, 150, 221 |
| MaeI | CTAG | 2 cut(s) | 375, 395 |
| MaeIII | GTNAC | 1 cut(s) | 104 |
| MalI | GATC | 1 cut(s) | 16 |
| MboI | GATC | 1 cut(s) | 14 |
| MluCI | AATT | 3 cut(s) | 136, 147, 361 |
| MlyI | GAGTC | 1 cut(s) | 67 |
| MnlI | CCTC | 4 cut(s) | 92, 124, 142, 165 |
| MseI | TTAA | 2 cut(s) | 270, 360 |
| MspCI | CTTAAG | 1 cut(s) | 269 |
| MspR9I | CCNGG | 1 cut(s) | 23 |
| Mva1269I | GAATGC | 1 cut(s) | 46 |
| MvaI | CCWGG | 1 cut(s) | 23 |
| NdeII | GATC | 1 cut(s) | 14 |
| NlaIV | GGNNCC | 1 cut(s) | 112 |
| PctI | GAATGC | 1 cut(s) | 46 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 95 |
| PleI | GAGTC | 1 cut(s) | 66 |
| PpsI | GAGTC | 1 cut(s) | 66 |
| PpuMI | RGGWCCY | 1 cut(s) | 111 |
| Psp5II | RGGWCCY | 1 cut(s) | 111 |
| Psp6I | CCWGG | 1 cut(s) | 21 |
| PspGI | CCWGG | 1 cut(s) | 21 |
| PspN4I | GGNNCC | 1 cut(s) | 112 |
| PspPI | GGNCC | 2 cut(s) | 111, 152 |
| PspPPI | RGGWCCY | 1 cut(s) | 111 |
| PstNI | CAGNNNCTG | 1 cut(s) | 33 |
| RsaI | GTAC | 2 cut(s) | 244, 369 |
| RsaNI | GTAC | 2 cut(s) | 243, 368 |
| SaqAI | TTAA | 2 cut(s) | 270, 360 |
| Sau3AI | GATC | 1 cut(s) | 14 |
| Sau96I | GGNCC | 2 cut(s) | 111, 152 |
| ScaI | AGTACT | 1 cut(s) | 244 |
| SchI | GAGTC | 1 cut(s) | 67 |
| ScrFI | CCNGG | 1 cut(s) | 23 |
| SetI | ASST | 5 cut(s) | 10, 32, 157, 169, 400 |
| SinI | GGWCC | 2 cut(s) | 111, 152 |
| SmlI | CTYRAG | 1 cut(s) | 269 |
| SmoI | CTYRAG | 1 cut(s) | 269 |
| SpeI | ACTAGT | 1 cut(s) | 374 |
| Sse9I | AATT | 3 cut(s) | 136, 147, 361 |
| SspMI | CTAG | 2 cut(s) | 375, 395 |
| StyD4I | CCNGG | 1 cut(s) | 21 |
| TaaI | ACNGT | 1 cut(s) | 353 |
| TaqI | TCGA | 2 cut(s) | 13, 134 |
| TasI | AATT | 3 cut(s) | 136, 147, 361 |
| TatI | WGTACW | 2 cut(s) | 242, 367 |
| Tru1I | TTAA | 2 cut(s) | 270, 360 |
| Tru9I | TTAA | 2 cut(s) | 270, 360 |
| TspDTI | ATGAA | 2 cut(s) | 17, 72 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 95 |
| Vha464I | CTTAAG | 1 cut(s) | 269 |
| VpaK11BI | GGWCC | 2 cut(s) | 111, 152 |
| XmiI | GTMKAC | 1 cut(s) | 275 |
| XspI | CTAG | 2 cut(s) | 375, 395 |
| ZrmI | AGTACT | 1 cut(s) | 244 |