Rh6AG390900

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000147
Physical Location & Seq
Reverse (-)
58934183 .. 58935343
1161 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG390900.1

Sequence Viewer

Length: 1161 bp
ATGGAGACCAGACAACCCGAAGACCAAATCCTAGCATGGAGGAATAAATTGGAATTCCAGGATCATTTTGTTGTTGACCCTGTTCACACTGGTGGTGGGTTAGCCCTTTTTTGGGATGATTTTGTTACTGTCTCTGTCATTGCTTCTTTAGTTAACTTTGTAGATACATTAGTTTGTTTCACTTCGGAAGGTTTTGTTTGTAAATTCACTTTCATGTATGGAAACCCTCATGATAATGAAAAGAAAGCCTTTTGGCGCTTGATGTATAATCGGTTTTCGCCTCGAAATTGTCCTTGGCTATGCCTTGGGGATTTCAACGAGATTCATTGGTCGTTTGAAAAATGGGGAGGGGCCGCTCCAGAATTATGGAGGATAAACCTATTCCAAAGCTTCATTTCAAATGTTCAACTTCGGGACTTGAATTTTCAAGGTCTGGAATTTACCTGGTTTGCCATGAGAAACAACAGAGTGTACATCAAGGAGCGTCTAGATAGGGCTATGGCAAATGTCGATTGGTGCTCAGCTCAAAGCAGAACTCAAGTGTTTCACCTCCCAAAAATCGGGTCAGATCATTGCCCAATTTTGGTTGATACTATTCCCAATGAAACTCATGGTCGCCCTTTATTCAGGTTTGAACAGTTCTGGAACTCTCATGTGGATTGTGCTTCGATTATAAAAGATTCTTGGAGTCATGTATCATTAGCCTCCCCTATGCACACTTGGGTATCAAATTTGGGTAATGTTAGAGTGTCTCTACAGAATTGGAGCAAAACTGCTTTCCCTACTTCTCATGCCCAGGTTAGGTCCTTAATTCGTGATTTGGAAGCCCTTCATGAATTCAATGCTCCTGACACTCATCACCAAATAGCTGACATCTCTGAAACTATTTCTAACCTTTGGAGCCGTGATGAGATGTATTGGCAGAAGCGTTCTAGAGTTATGTGGCTTCAATTGGGGGATCCAAACTCAAGTTTTTTCCATCAAGTTACCCTACAACGGCGCCAATTCAATAAAATCCTTAGATTGCAAGAGGACACCGGTCAATGGATTCACAATGAAAGTGATATCAGTGGCAGTTTTTTTTCACTTATTTTAAGCAACTATTCTCTTCTACTGGTTCTCAATAGTGGTTTGAAGTCCTTGATTTCATTGACCCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

386

Amino Acids

45.11

Weight (kDa)

6.34

Isoelectric Point (pI)

36.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos PF03372 2 - 191 3.3e-08 Endonuclease/Exonuclease/phosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000147)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10354 FvH4_1g17131 FvH4_2g11611 FvH4_2g33851 FvH4_3g32112 FvH4_3g35052 FvH4_3g44611 FvH4_4g05921 FvH4_4g06411 FvH4_4g06792 FvH4_4g10365 FvH4_4g21422 FvH4_4g22401 FvH4_4g30261 FvH4_5g08843 FvH4_5g14731 FvH4_5g24781 FvH4_5g26231 FvH4_5g31282 FvH4_6g23371 FvH4_6g38511 FvH4_7g01171 FvH4_7g03341 FvH4_7g06171 FvH4_7g32472
prunus_persica Prupe.2G036900_v2.0.a1
pyrus_communis pycom02g19900 pycom03g01520 pycom05g10510 pycom16g23820
rosa_chinensis RchiOBHm_Chr1g0316031 RchiOBHm_Chr1g0342451 RchiOBHm_Chr1g0344541 RchiOBHm_Chr1g0364721 RchiOBHm_Chr2g0133541 RchiOBHm_Chr2g0134511 RchiOBHm_Chr2g0145891 RchiOBHm_Chr2g0163241 RchiOBHm_Chr5g0027201 RchiOBHm_Chr5g0027881 RchiOBHm_Chr5g0047471 RchiOBHm_Chr7g0210901
rosa_laevigata RLG00000011116 RLG00000017964 RLG00000018128 RLG00000018387 RLG00000018829 RLG00000019353 RLG00000028973 RLG00000035870 RLG00000036629
rosa_multiflora Rmu_co8126340.1_g000001 Rmu_co8216750.1_g000001 Rmu_co8222072.1_g000001 Rmu_co8332453.1_g000001 Rmu_co8349913.1_g000001 Rmu_co8405337.1_g000001 Rmu_sc0000041.1_g000012 Rmu_sc0000166.1_g000029 Rmu_sc0000251.1_g000019 Rmu_sc0000271.1_g000028 Rmu_sc0000509.1_g000036 Rmu_sc0000543.1_g000048 Rmu_sc0000808.1_g000003 Rmu_sc0000847.1_g000040 Rmu_sc0000972.1_g000020 Rmu_sc0001260.1_g000001 Rmu_sc0001464.1_g000026 Rmu_sc0001616.1_g000003 Rmu_sc0001669.1_g000001 Rmu_sc0002005.1_g000001 Rmu_sc0002014.1_g000010 Rmu_sc0002082.1_g000033 Rmu_sc0002302.1_g000024 Rmu_sc0002531.1_g000045 Rmu_sc0003276.1_g000002 Rmu_sc0003737.1_g000007 Rmu_sc0003832.1_g000022 Rmu_sc0004080.1_g000011 Rmu_sc0004487.1_g000009 Rmu_sc0004988.1_g000018 Rmu_sc0004988.1_g000019 Rmu_sc0005254.1_g000002 Rmu_sc0005733.1_g000004 Rmu_sc0006413.1_g000006 Rmu_sc0007121.1_g000013 Rmu_sc0007869.1_g000006 Rmu_sc0008035.1_g000015 Rmu_sc0008279.1_g000017 Rmu_sc0008351.1_g000014 Rmu_sc0008957.1_g000007 Rmu_sc0009012.1_g000007 Rmu_sc0010556.1_g000009 Rmu_sc0012889.1_g000003 Rmu_sc0019808.1_g000004 Rmu_sc0028113.1_g000001 Rmu_sc0031202.1_g000001 Rmu_sc0034436.1_g000001 Rmu_sc0034445.1_g000001 Rmu_sc0040044.1_g000001 Rmu_ssc0000062.1_g000032 Rmu_ssc0000372.1_g000018
rosa_roxburghii Rroxscaffold_1G00001520 Rroxscaffold_1G00039990 Rroxscaffold_1G00046370 Rroxscaffold_2G00110140 Rroxscaffold_2G00131420 Rroxscaffold_3G00222390 Rroxscaffold_5G00336040 Rroxscaffold_5G00338000 Rroxscaffold_5G00344030 Rroxscaffold_5G00363460 Rroxscaffold_6G00402000 Rroxscaffold_7G00194940
rosa_rugosa Rorug01G0106500 Rorug01G0111300 Rorug01G0247000 Rorug02G0318100.1 Rorug02G0318200 Rorug02G0459500 Rorug03G0108100 Rorug03G0200500 Rorug03G0232500 Rorug03G0240600 Rorug04G0105300 Rorug04G0256600 Rorug06G0079300 Rorug06G0082700 Rorug06G0095600 Rorug06G0179000 Rorug07G0113500 Rorug07G0271100
rosa_samantha Rh1AG087200 Rh1CG085300 Rh1DG013200 Rh1DG091700 Rh1DG091800 Rh1DG338300 Rh2AG375400 Rh2AG407000 Rh2AG513500 Rh2BG277700 Rh2BG371200 Rh2BG376100 Rh2BG580500 Rh2CG354300 Rh2DG200100 Rh2DG388000 Rh2DG393500 Rh2DG426400 Rh3CG304800 Rh4AG044600 Rh4AG220500 Rh4BG379300 Rh4CG007100 Rh4CG030300 Rh4CG038000 Rh4CG114900 Rh4CG393700 Rh5AG124900 Rh5AG342300 Rh5BG414400 Rh5CG263800 Rh5CG439000 Rh5DG231100 Rh5DG566900 Rh6AG138600 Rh6AG200000 Rh6AG253100 Rh6AG390900 Rh6AG441600 Rh6BG194700 Rh6BG225800 Rh6BG256100 Rh6CG231700 Rh6CG231900 Rh6CG312200 Rh6CG453700 Rh6DG219400 Rh7AG357700 Rh7AG442000 Rh7CG425700 Rh7CG474600 Rh7CG494100 Rh7DG253900 Rh7DG294700 Rh7DG401600 Rh7DG461300
rosa_wichuraiana Rw1G001190 Rw2G047020 Rw4G003490 Rw5G039690 Rw6G010450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 674
AccB1I GGYRCC 1 cut(s) 999
AccBSI CCGCTC 1 cut(s) 356
AciI CCGC 1 cut(s) 354
AclWI GGATC 3 cut(s) 69, 953, 966
AcsI RAATTY 6 cut(s) 53, 203, 421, 437, 730, 836
AcyI GRCGYC 1 cut(s) 1000
AfaI GTAC 1 cut(s) 473
AfiI CCNNNNNNNGG 7 cut(s) 111, 112, 560, 583, 801, 996, 1044
AgeI ACCGGT 1 cut(s) 1037
AjnI CCWGG 3 cut(s) 57, 443, 795
AjuI GAANNNNNNNTTGG 2 cut(s) 277, 309
AleI CACNNNNGTG 1 cut(s) 90
AluBI AGCT 3 cut(s) 390, 524, 869
AluI AGCT 3 cut(s) 390, 524, 869
Alw21I GWGCWC 1 cut(s) 521
Alw26I GTCTC 2 cut(s) 136, 756
AlwI GGATC 3 cut(s) 69, 953, 966
AoxI GGCC 1 cut(s) 351
ApoI RAATTY 6 cut(s) 53, 203, 421, 437, 730, 836
ArsI GACNNNNNNTTYG 2 cut(s) 548, 580
AsiGI ACCGGT 1 cut(s) 1037
Asp700I GAANNNNTTC 1 cut(s) 828
AspLEI GCGC 2 cut(s) 258, 1002
AspS9I GGNCC 2 cut(s) 351, 804
AsuHPI GGTGA 2 cut(s) 539, 851
AvaII GGWCC 1 cut(s) 804
BaeI ACNNNNGTAYC 4 cut(s) 156, 189, 708, 741
BamHI GGATCC 1 cut(s) 958
BanI GGYRCC 1 cut(s) 999
BbsI GAAGAC 1 cut(s) 27
Bbv12I GWGCWC 1 cut(s) 521
BccI CCATC 1 cut(s) 987
BceAI ACGGC 2 cut(s) 888, 1013
BciT130I CCWGG 3 cut(s) 59, 445, 797
BcoDI GTCTC 2 cut(s) 136, 756
BfaI CTAG 3 cut(s) 32, 488, 933
BfmI CTRYAG 2 cut(s) 755, 1157
BfoI RGCGCY 2 cut(s) 259, 1003
BisI GCNGC 1 cut(s) 354
BlpI GCTNAGC 1 cut(s) 520
BlsI GCNGC 1 cut(s) 355
Bme1390I CCNGG 3 cut(s) 59, 445, 797
Bme18I GGWCC 1 cut(s) 804
BmgT120I GGNCC 2 cut(s) 351, 804
BmiI GGNNCC 4 cut(s) 352, 902, 960, 1001
BmrFI CCNGG 3 cut(s) 59, 445, 797
BoxI GACNNNNGTC 1 cut(s) 1038
BpiI GAAGAC 1 cut(s) 27
BpmI CTGGAG 1 cut(s) 342
Bpu1102I GCTNAGC 1 cut(s) 520
BpuEI CTTGAG 2 cut(s) 522, 952
BsaHI GRCGYC 1 cut(s) 1000
BsaJI CCNNGG 3 cut(s) 293, 304, 795
BsaWI WCCGGW 1 cut(s) 1037
Bsc4I CCNNNNNNNGG 7 cut(s) 111, 112, 560, 583, 801, 996, 1044
Bse118I RCCGGY 1 cut(s) 1037
Bse1I ACTGG 2 cut(s) 94, 1119
Bse3DI GCAATG 2 cut(s) 138, 571
BseBI CCWGG 3 cut(s) 59, 445, 797
BseDI CCNNGG 3 cut(s) 293, 304, 795
BseGI GGATG 1 cut(s) 121
BseLI CCNNNNNNNGG 7 cut(s) 111, 112, 560, 583, 801, 996, 1044
BseMI GCAATG 2 cut(s) 138, 571
BseMII CTCAG 1 cut(s) 534
BseNI ACTGG 2 cut(s) 94, 1119
BshFI GGCC 1 cut(s) 353
BshNI GGYRCC 1 cut(s) 999
BshTI ACCGGT 1 cut(s) 1037
BsiHKAI GWGCWC 1 cut(s) 521
BsiSI CCGG 1 cut(s) 1038
BslFI GGGAC 1 cut(s) 428
BslI CCNNNNNNNGG 7 cut(s) 111, 112, 560, 583, 801, 996, 1044
BsmAI GTCTC 2 cut(s) 136, 756
BsmFI GGGAC 1 cut(s) 428
BsnI GGCC 1 cut(s) 353
Bsp1286I GDGCHC 1 cut(s) 521
Bsp1407I TGTACA 1 cut(s) 471
Bsp143I GATC 3 cut(s) 61, 568, 958
Bsp1720I GCTNAGC 1 cut(s) 520
BspACI CCGC 1 cut(s) 354
BspANI GGCC 1 cut(s) 353
BspCNI CTCAG 1 cut(s) 533
BspHI TCATGA 2 cut(s) 229, 832
BspLI GGNNCC 4 cut(s) 352, 902, 960, 1001
BspPI GGATC 3 cut(s) 69, 953, 966
BspT107I GGYRCC 1 cut(s) 999
BsrBI CCGCTC 1 cut(s) 356
BsrDI GCAATG 2 cut(s) 138, 571
BsrFI RCCGGY 1 cut(s) 1037
BsrGI TGTACA 1 cut(s) 471
BsrI ACTGG 2 cut(s) 94, 1119
BssAI RCCGGY 1 cut(s) 1037
BssECI CCNNGG 3 cut(s) 293, 304, 795
BssMI GATC 3 cut(s) 61, 568, 958
BssNI GRCGYC 1 cut(s) 1000
BssT1I CCWWGG 2 cut(s) 293, 304
Bst2UI CCWGG 3 cut(s) 59, 445, 797
Bst4CI ACNGT 2 cut(s) 130, 639
Bst6I CTCTTC 1 cut(s) 1113
BstACI GRCGYC 1 cut(s) 1000
BstAUI TGTACA 1 cut(s) 471
BstDEI CTNAG 2 cut(s) 520, 1019
BstF5I GGATG 1 cut(s) 121
BstH2I RGCGCY 2 cut(s) 259, 1003
BstHHI GCGC 2 cut(s) 258, 1002
BstKTI GATC 3 cut(s) 64, 571, 961
BstMAI GTCTC 2 cut(s) 136, 756
BstMBI GATC 3 cut(s) 61, 568, 958
BstNI CCWGG 3 cut(s) 59, 445, 797
BstPAI GACNNNNGTC 1 cut(s) 1038
BstSCI CCNGG 3 cut(s) 57, 443, 795
BstSFI CTRYAG 2 cut(s) 755, 1157
BstV2I GAAGAC 1 cut(s) 27
BstX2I RGATCY 1 cut(s) 958
BstXI CCANNNNNNTGG 1 cut(s) 366
BstYI RGATCY 1 cut(s) 958
BsuRI GGCC 1 cut(s) 353
BtsCI GGATG 1 cut(s) 121
BtsIMutI CAGTG 2 cut(s) 87, 1075
CciI TCATGA 2 cut(s) 229, 832
CfoI GCGC 2 cut(s) 258, 1002
Cfr10I RCCGGY 1 cut(s) 1037
Cfr13I GGNCC 2 cut(s) 351, 804
CseI GACGC 1 cut(s) 473
CsiI ACCWGGT 1 cut(s) 443
Csp6I GTAC 1 cut(s) 472
CspAI ACCGGT 1 cut(s) 1037
CviAII CATG 9 cut(s) 36, 214, 230, 454, 611, 653, 692, 791, 833
CviQI GTAC 1 cut(s) 472
DdeI CTNAG 2 cut(s) 520, 1019
DinI GGCGCC 1 cut(s) 1001
DpnI GATC 3 cut(s) 63, 570, 960
DpnII GATC 3 cut(s) 61, 568, 958
Eam1104I CTCTTC 1 cut(s) 1113
EarI CTCTTC 1 cut(s) 1113
Eco130I CCWWGG 2 cut(s) 293, 304
Eco32I GATATC 1 cut(s) 1066
Eco47I GGWCC 1 cut(s) 804
EcoO109I RGGNCCY 1 cut(s) 804
EcoRI GAATTC 2 cut(s) 53, 836
EcoRII CCWGG 3 cut(s) 57, 443, 795
EcoRV GATATC 1 cut(s) 1066
EcoT14I CCWWGG 2 cut(s) 293, 304
EgeI GGCGCC 1 cut(s) 1001
EheI GGCGCC 1 cut(s) 1001
ErhI CCWWGG 2 cut(s) 293, 304
FaeI CATG 9 cut(s) 39, 217, 233, 457, 614, 656, 695, 794, 836
FalI AAGNNNNNCTT 2 cut(s) 233, 265
FaqI GGGAC 1 cut(s) 428
FatI CATG 9 cut(s) 35, 213, 229, 453, 610, 652, 691, 790, 832
Fnu4HI GCNGC 1 cut(s) 354
FokI GGATG 1 cut(s) 128
Fsp4HI GCNGC 1 cut(s) 354
FspBI CTAG 3 cut(s) 32, 488, 933
GlaI GCGC 2 cut(s) 257, 1001
GluI GCNGC 1 cut(s) 354
GsuI CTGGAG 1 cut(s) 342
HaeII RGCGCY 2 cut(s) 259, 1003
HaeIII GGCC 1 cut(s) 353
HapII CCGG 1 cut(s) 1038
HgaI GACGC 1 cut(s) 473
HhaI GCGC 2 cut(s) 258, 1002
Hin1I GRCGYC 1 cut(s) 1000
Hin1II CATG 9 cut(s) 39, 217, 233, 457, 614, 656, 695, 794, 836
Hin6I GCGC 2 cut(s) 256, 1000
HinP1I GCGC 2 cut(s) 256, 1000
HincII GTYRAC 2 cut(s) 76, 154
HindII GTYRAC 2 cut(s) 76, 154
HindIII AAGCTT 1 cut(s) 388
HinfI GANTC 4 cut(s) 322, 680, 688, 1048
HpaI GTTAAC 1 cut(s) 154
HpaII CCGG 1 cut(s) 1038
HphI GGTGA 2 cut(s) 539, 851
Hpy166II GTNNAC 4 cut(s) 76, 85, 154, 472
Hpy188I TCNGA 3 cut(s) 187, 568, 880
Hpy8I GTNNAC 4 cut(s) 76, 85, 154, 472
HpyAV CCTTC 2 cut(s) 182, 839
HpyCH4III ACNGT 2 cut(s) 130, 639
HpyCH4V TGCA 2 cut(s) 715, 1027
HpyF3I CTNAG 2 cut(s) 520, 1019
Hsp92I GRCGYC 1 cut(s) 1000
Hsp92II CATG 9 cut(s) 39, 217, 233, 457, 614, 656, 695, 794, 836
HspAI GCGC 2 cut(s) 256, 1000
KasI GGCGCC 1 cut(s) 999
KspAI GTTAAC 1 cut(s) 154
Kzo9I GATC 3 cut(s) 61, 568, 958
LmnI GCTCC 5 cut(s) 361, 481, 765, 850, 900
MabI ACCWGGT 1 cut(s) 443
MaeI CTAG 3 cut(s) 32, 488, 933
MaeIII GTNAC 2 cut(s) 124, 985
MalI GATC 3 cut(s) 63, 570, 960
MbiI CCGCTC 1 cut(s) 356
MboI GATC 3 cut(s) 61, 568, 958
MboII GAAGA 2 cut(s) 32, 1100
MfeI CAATTG 1 cut(s) 950
MflI RGATCY 1 cut(s) 958
MhlI GDGCHC 1 cut(s) 521
Mly113I GGCGCC 1 cut(s) 1000
MlyI GAGTC 1 cut(s) 697
MnlI CCTC 8 cut(s) 33, 237, 291, 341, 363, 560, 715, 1024
MroXI GAANNNNTTC 1 cut(s) 828
MseI TTAA 3 cut(s) 153, 809, 1094
MslI CAYNNNNRTG 3 cut(s) 90, 212, 234
MspI CCGG 1 cut(s) 1038
MspR9I CCNGG 3 cut(s) 59, 445, 797
MunI CAATTG 1 cut(s) 950
MvaI CCWGG 3 cut(s) 59, 445, 797
NarI GGCGCC 1 cut(s) 1000
NdeII GATC 3 cut(s) 61, 568, 958
NlaIII CATG 9 cut(s) 39, 217, 233, 457, 614, 656, 695, 794, 836
NlaIV GGNNCC 4 cut(s) 352, 902, 960, 1001
OliI CACNNNNGTG 1 cut(s) 90
PagI TCATGA 2 cut(s) 229, 832
PdmI GAANNNNTTC 1 cut(s) 828
PfeI GAWTC 3 cut(s) 322, 680, 1048
PfoI TCCNGGA 1 cut(s) 57
PinAI ACCGGT 1 cut(s) 1037
PkrI GCNGC 1 cut(s) 355
PleI GAGTC 1 cut(s) 696
PluTI GGCGCC 1 cut(s) 1003
PpsI GAGTC 1 cut(s) 696
PpuMI RGGWCCY 1 cut(s) 804
PshAI GACNNNNGTC 1 cut(s) 1038
PsiI TTATAA 1 cut(s) 674
Psp5II RGGWCCY 1 cut(s) 804
Psp6I CCWGG 3 cut(s) 57, 443, 795
PspGI CCWGG 3 cut(s) 57, 443, 795
PspN4I GGNNCC 4 cut(s) 352, 902, 960, 1001
PspPI GGNCC 2 cut(s) 351, 804
PspPPI RGGWCCY 1 cut(s) 804
PsuI RGATCY 1 cut(s) 958
RsaI GTAC 1 cut(s) 473
RsaNI GTAC 1 cut(s) 472
RseI CAYNNNNRTG 3 cut(s) 90, 212, 234
SaqAI TTAA 3 cut(s) 153, 809, 1094
SatI GCNGC 1 cut(s) 354
Sau3AI GATC 3 cut(s) 61, 568, 958
Sau96I GGNCC 2 cut(s) 351, 804
SchI GAGTC 1 cut(s) 697
ScrFI CCNGG 3 cut(s) 59, 445, 797
SduI GDGCHC 1 cut(s) 521
SexAI ACCWGGT 1 cut(s) 443
SfcI CTRYAG 2 cut(s) 755, 1157
SfoI GGCGCC 1 cut(s) 1001
SinI GGWCC 1 cut(s) 804
SmiMI CAYNNNNRTG 3 cut(s) 90, 212, 234
SmlI CTYRAG 2 cut(s) 537, 967
SmoI CTYRAG 2 cut(s) 537, 967
SsiI CCGC 1 cut(s) 354
SspDI GGCGCC 1 cut(s) 999
SspMI CTAG 3 cut(s) 32, 488, 933
StyD4I CCNGG 3 cut(s) 57, 443, 795
StyI CCWWGG 2 cut(s) 293, 304
TaaI ACNGT 2 cut(s) 130, 639
TaqI TCGA 3 cut(s) 283, 510, 668
TatI WGTACW 1 cut(s) 471
TauI GCSGC 1 cut(s) 356
TfiI GAWTC 3 cut(s) 322, 680, 1048
Tru1I TTAA 3 cut(s) 153, 809, 1094
Tru9I TTAA 3 cut(s) 153, 809, 1094
TscAI CASTG 2 cut(s) 94, 1075
TspDTI ATGAA 9 cut(s) 202, 252, 314, 382, 618, 821, 849, 1071, 1137
TspRI CASTG 2 cut(s) 94, 1075
VpaK11BI GGWCC 1 cut(s) 804
XapI RAATTY 6 cut(s) 53, 203, 421, 437, 730, 836
XbaI TCTAGA 2 cut(s) 487, 932
XmnI GAANNNNTTC 1 cut(s) 828
XspI CTAG 3 cut(s) 32, 488, 933
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.