FvH4_4g05921

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000147
Physical Location & Seq
Forward (+)
5348265 .. 5353840
5576 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g05921.t1

Sequence Viewer

Length: 1557 bp
ATGGGAGATAGGAGGGTCACCACCCCCGGTAGTAGGGAAATTTGCGTGGTCTTGTCTCTTGCTTGCCACGTGTATGGCCTTTGTATAACCAAGAAAGTAGGGGCCCGGCGGCTTATTTTATTTTCTTTCTCTGGTCAGGAAAAGCAGGAGACCGGTAGGCGGCTAATTACAAAGAGACGGAACTCGAAACAACGTTTCATTTGGTCTATCAAAAATGAAAAGGCCAATGATGCAGAGACTATTCCTATTATAGAGGAAGCATGGGTGAAAAATCCAAATAAGTGTAATGTGTCACTTTGGAACGAAAACTTGGGCAAATGTCGCTCTAAACTGTTAGGGTGGAATCGCCGCAAATACCCTAGATGTGATAAAGAGTTAATCAAGGAATGTTTGTTTGACTTGGAGGCATTACAATGCGCTAATCCTTTTGATAGTATTGAGGAGCAGGAAAGGTTATCTTCCAAACTTGGGGACTTGTGGATCAAAGAGGAACAATATTGGCATCAAAGGATTTGGCTCACTGGTGACCAGCTAGTTAGGTCTGAGTTTGATACGCAATTTCAAGCTATCTTTCAAGGATATGGCCCTAGATGCTGGGGGGATGTGTTTATGGGGGTTAAATCTGTGGTTTTGAGGAAGTTCACAATCCAGGAACCTATCTTGGTTTGCCTACCATTTGGGGGAGGTCAAAAAAGGAAGCCTTGGTCTACATTAAGGAAAGAATTGGGAGGAAGATTGAAGGGTGGAAAGAAAGATGTCTTTCTCAGTCGGGGAAGGAAATTTGATAAAAGCAGTGGTATCTGCTATTCCGGCGGGTGGTCAAGCATCTCACAAGCTAGAGATTTGATAATGGAGGGCTCTGGTTGGCAAATCGCCAATGGATTGAAGGTGAATATATGGAAGGAGAATTGGCTTCATCCCCCTGATGTACGCCTTATTCAGACTACTGCTCAGATAAGTAACAATGATCCACAATTGGCCGTGTGGTTTGGTTCATCATTGGGTCTCAAAATCAACAAAAATCATATATCAACATTAGATTCTTGGAAACCAATTAGCCCTCCCGCCGTGATTCGATCCAGCCTTAATCTAGCCTTGGAGTTTTGGAGTGCAAACCGGAAAGACCCACCATCTCTGGAGTCCGAAGCGAGTACTCGAAAACGATGGCAGCCCTCGCCATTAGATGTTTTGGATGTATGTTGTGATGCCTCATGGATTGAATCGGGGTCTTGTGGTATAGGAGTTGTTATCAGGTCGAATTCCGAAGAGCTTGTGGATTGTGTCTCCAATGTGAATAAGTGCGGATCATCTGCAATAGCAGAAGTAAATGCATTGCTTCTTGGAGTGGATACGACCTTAAATCTGGGATTGGGGAAGGTGTGTCTCATATCAAATTCCCTAGAAGTCATTAACAACATCAAAGCTTCATCTAACTACATGGATTGGAGGTTATTCCCAATCATTGAAGAAATTAGAAAGAGAAGTCAGAGTTTTGGTTCTATTACCTGGGAATGGATTCCCCATAGAGCTTCATCTAACTACAAGCTGGTCATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

519

Amino Acids

58.72

Weight (kDa)

9.26

Isoelectric Point (pI)

55.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_3 PF13456 403 - 508 2.8e-15 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000147)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10354 FvH4_1g17131 FvH4_2g11611 FvH4_2g33851 FvH4_3g32112 FvH4_3g35052 FvH4_3g44611 FvH4_4g05921 FvH4_4g06411 FvH4_4g06792 FvH4_4g10365 FvH4_4g21422 FvH4_4g22401 FvH4_4g30261 FvH4_5g08843 FvH4_5g14731 FvH4_5g24781 FvH4_5g26231 FvH4_5g31282 FvH4_6g23371 FvH4_6g38511 FvH4_7g01171 FvH4_7g03341 FvH4_7g06171 FvH4_7g32472
prunus_persica Prupe.2G036900_v2.0.a1
pyrus_communis pycom02g19900 pycom03g01520 pycom05g10510 pycom16g23820
rosa_chinensis RchiOBHm_Chr1g0316031 RchiOBHm_Chr1g0342451 RchiOBHm_Chr1g0344541 RchiOBHm_Chr1g0364721 RchiOBHm_Chr2g0133541 RchiOBHm_Chr2g0134511 RchiOBHm_Chr2g0145891 RchiOBHm_Chr2g0163241 RchiOBHm_Chr5g0027201 RchiOBHm_Chr5g0027881 RchiOBHm_Chr5g0047471 RchiOBHm_Chr7g0210901
rosa_laevigata RLG00000011116 RLG00000017964 RLG00000018128 RLG00000018387 RLG00000018829 RLG00000019353 RLG00000028973 RLG00000035870 RLG00000036629
rosa_multiflora Rmu_co8126340.1_g000001 Rmu_co8216750.1_g000001 Rmu_co8222072.1_g000001 Rmu_co8332453.1_g000001 Rmu_co8349913.1_g000001 Rmu_co8405337.1_g000001 Rmu_sc0000041.1_g000012 Rmu_sc0000166.1_g000029 Rmu_sc0000251.1_g000019 Rmu_sc0000271.1_g000028 Rmu_sc0000509.1_g000036 Rmu_sc0000543.1_g000048 Rmu_sc0000808.1_g000003 Rmu_sc0000847.1_g000040 Rmu_sc0000972.1_g000020 Rmu_sc0001260.1_g000001 Rmu_sc0001464.1_g000026 Rmu_sc0001616.1_g000003 Rmu_sc0001669.1_g000001 Rmu_sc0002005.1_g000001 Rmu_sc0002014.1_g000010 Rmu_sc0002082.1_g000033 Rmu_sc0002302.1_g000024 Rmu_sc0002531.1_g000045 Rmu_sc0003276.1_g000002 Rmu_sc0003737.1_g000007 Rmu_sc0003832.1_g000022 Rmu_sc0004080.1_g000011 Rmu_sc0004487.1_g000009 Rmu_sc0004988.1_g000018 Rmu_sc0004988.1_g000019 Rmu_sc0005254.1_g000002 Rmu_sc0005733.1_g000004 Rmu_sc0006413.1_g000006 Rmu_sc0007121.1_g000013 Rmu_sc0007869.1_g000006 Rmu_sc0008035.1_g000015 Rmu_sc0008279.1_g000017 Rmu_sc0008351.1_g000014 Rmu_sc0008957.1_g000007 Rmu_sc0009012.1_g000007 Rmu_sc0010556.1_g000009 Rmu_sc0012889.1_g000003 Rmu_sc0019808.1_g000004 Rmu_sc0028113.1_g000001 Rmu_sc0031202.1_g000001 Rmu_sc0034436.1_g000001 Rmu_sc0034445.1_g000001 Rmu_sc0040044.1_g000001 Rmu_ssc0000062.1_g000032 Rmu_ssc0000372.1_g000018
rosa_roxburghii Rroxscaffold_1G00001520 Rroxscaffold_1G00039990 Rroxscaffold_1G00046370 Rroxscaffold_2G00110140 Rroxscaffold_2G00131420 Rroxscaffold_3G00222390 Rroxscaffold_5G00336040 Rroxscaffold_5G00338000 Rroxscaffold_5G00344030 Rroxscaffold_5G00363460 Rroxscaffold_6G00402000 Rroxscaffold_7G00194940
rosa_rugosa Rorug01G0106500 Rorug01G0111300 Rorug01G0247000 Rorug02G0318100.1 Rorug02G0318200 Rorug02G0459500 Rorug03G0108100 Rorug03G0200500 Rorug03G0232500 Rorug03G0240600 Rorug04G0105300 Rorug04G0256600 Rorug06G0079300 Rorug06G0082700 Rorug06G0095600 Rorug06G0179000 Rorug07G0113500 Rorug07G0271100
rosa_samantha Rh1AG087200 Rh1CG085300 Rh1DG013200 Rh1DG091700 Rh1DG091800 Rh1DG338300 Rh2AG375400 Rh2AG407000 Rh2AG513500 Rh2BG277700 Rh2BG371200 Rh2BG376100 Rh2BG580500 Rh2CG354300 Rh2DG200100 Rh2DG388000 Rh2DG393500 Rh2DG426400 Rh3CG304800 Rh4AG044600 Rh4AG220500 Rh4BG379300 Rh4CG007100 Rh4CG030300 Rh4CG038000 Rh4CG114900 Rh4CG393700 Rh5AG124900 Rh5AG342300 Rh5BG414400 Rh5CG263800 Rh5CG439000 Rh5DG231100 Rh5DG566900 Rh6AG138600 Rh6AG200000 Rh6AG253100 Rh6AG390900 Rh6AG441600 Rh6BG194700 Rh6BG225800 Rh6BG256100 Rh6CG231700 Rh6CG231900 Rh6CG312200 Rh6CG453700 Rh6DG219400 Rh7AG357700 Rh7AG442000 Rh7CG425700 Rh7CG474600 Rh7CG494100 Rh7DG253900 Rh7DG294700 Rh7DG401600 Rh7DG461300
rosa_wichuraiana Rw1G001190 Rw2G047020 Rw4G003490 Rw5G039690 Rw6G010450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 707
AciI CCGC 6 cut(s) 109, 160, 349, 813, 1065, 1302
AclI AACGTT 1 cut(s) 193
AclWI GGATC 4 cut(s) 488, 962, 1071, 1312
AcoI YGGCCR 1 cut(s) 978
AcsI RAATTY 4 cut(s) 39, 779, 1258, 1393
AcvI CACGTG 1 cut(s) 70
AfaI GTAC 2 cut(s) 930, 1153
AfiI CCNNNNNNNGG 6 cut(s) 33, 159, 468, 680, 816, 1512
AflIII ACRYGT 1 cut(s) 69
AgeI ACCGGT 1 cut(s) 152
AgsI TTSAA 6 cut(s) 563, 575, 739, 886, 1220, 1466
AjnI CCWGG 2 cut(s) 648, 1505
AjuI GAANNNNNNNTTGG 2 cut(s) 293, 325
AluBI AGCT 7 cut(s) 532, 566, 836, 1270, 1424, 1529, 1546
AluI AGCT 7 cut(s) 532, 566, 836, 1270, 1424, 1529, 1546
Alw26I GTCTC 7 cut(s) 60, 143, 169, 230, 1010, 1288, 1388
AlwI GGATC 4 cut(s) 488, 962, 1071, 1312
AoxI GGCC 5 cut(s) 76, 102, 222, 583, 978
ApaI GGGCCC 1 cut(s) 106
ApeKI GCWGC 1 cut(s) 1168
ApoI RAATTY 4 cut(s) 39, 779, 1258, 1393
AsiGI ACCGGT 1 cut(s) 152
Asp700I GAANNNNTTC 1 cut(s) 1515
AspLEI GCGC 1 cut(s) 419
AspS9I GGNCC 3 cut(s) 102, 103, 584
AsuC2I CCSGG 2 cut(s) 27, 106
AsuHPI GGTGA 4 cut(s) 10, 277, 536, 901
BaeGI GKGCMC 1 cut(s) 106
BanII GRGCYC 2 cut(s) 106, 860
BbrPI CACGTG 1 cut(s) 70
BbvI GCAGC 1 cut(s) 1180
BccI CCATC 2 cut(s) 1138, 1158
BceAI ACGGC 2 cut(s) 965, 1052
BciT130I CCWGG 2 cut(s) 650, 1507
BciVI GTATCC 1 cut(s) 1342
BcnI CCSGG 2 cut(s) 27, 106
BcoDI GTCTC 7 cut(s) 60, 143, 169, 230, 1010, 1288, 1388
BfaI CTAG 6 cut(s) 360, 533, 588, 837, 1091, 1400
BfuI GTATCC 1 cut(s) 1342
BisI GCNGC 4 cut(s) 110, 161, 349, 1169
BlsI GCNGC 4 cut(s) 111, 162, 350, 1170
BmcAI AGTACT 1 cut(s) 1153
Bme1390I CCNGG 4 cut(s) 27, 106, 650, 1507
BmgT120I GGNCC 3 cut(s) 102, 103, 584
BmiI GGNNCC 3 cut(s) 103, 104, 654
BmrFI CCNGG 4 cut(s) 27, 106, 650, 1507
BmsI GCATC 5 cut(s) 220, 511, 581, 834, 1195
BpmI CTGGAG 1 cut(s) 1157
BpuMI CCSGG 2 cut(s) 27, 106
BsaAI YACGTR 1 cut(s) 70
BsaI GGTCTC 2 cut(s) 143, 1010
BsaJI CCNNGG 4 cut(s) 25, 701, 1095, 1506
BsaWI WCCGGW 2 cut(s) 152, 1116
Bsc4I CCNNNNNNNGG 6 cut(s) 33, 159, 468, 680, 816, 1512
Bse118I RCCGGY 1 cut(s) 152
Bse1I ACTGG 1 cut(s) 526
Bse3DI GCAATG 1 cut(s) 1331
BseBI CCWGG 2 cut(s) 650, 1507
BseDI CCNNGG 4 cut(s) 25, 701, 1095, 1506
BseGI GGATG 3 cut(s) 607, 916, 1198
BseLI CCNNNNNNNGG 6 cut(s) 33, 159, 468, 680, 816, 1512
BseMI GCAATG 1 cut(s) 1331
BseMII CTCAG 3 cut(s) 534, 778, 965
BseNI ACTGG 1 cut(s) 526
BseRI GAGGAG 1 cut(s) 455
BseSI GKGCMC 1 cut(s) 106
BseXI GCAGC 1 cut(s) 1180
BseYI CCCAGC 1 cut(s) 594
BshFI GGCC 5 cut(s) 78, 104, 224, 585, 980
BshTI ACCGGT 1 cut(s) 152
BsiSI CCGG 5 cut(s) 27, 106, 153, 810, 1117
BslFI GGGAC 1 cut(s) 485
BslI CCNNNNNNNGG 6 cut(s) 33, 159, 468, 680, 816, 1512
BsmAI GTCTC 7 cut(s) 60, 143, 169, 230, 1010, 1288, 1388
BsmBI CGTCTC 1 cut(s) 169
BsmFI GGGAC 1 cut(s) 485
BsnI GGCC 5 cut(s) 78, 104, 224, 585, 980
Bso31I GGTCTC 2 cut(s) 143, 1010
Bsp120I GGGCCC 1 cut(s) 102
Bsp1286I GDGCHC 2 cut(s) 106, 860
Bsp143I GATC 4 cut(s) 480, 967, 1076, 1304
BspACI CCGC 6 cut(s) 109, 160, 349, 813, 1065, 1302
BspANI GGCC 5 cut(s) 78, 104, 224, 585, 980
BspCNI CTCAG 3 cut(s) 535, 777, 964
BspLI GGNNCC 3 cut(s) 103, 104, 654
BspPI GGATC 4 cut(s) 488, 962, 1071, 1312
BspQI GCTCTTC 1 cut(s) 1260
BspTNI GGTCTC 2 cut(s) 143, 1010
BsrDI GCAATG 1 cut(s) 1331
BsrFI RCCGGY 1 cut(s) 152
BsrI ACTGG 1 cut(s) 526
BssAI RCCGGY 1 cut(s) 152
BssECI CCNNGG 4 cut(s) 25, 701, 1095, 1506
BssMI GATC 4 cut(s) 480, 967, 1076, 1304
BssT1I CCWWGG 2 cut(s) 701, 1095
Bst2UI CCWGG 2 cut(s) 650, 1507
Bst4CI ACNGT 1 cut(s) 333
Bst6I CTCTTC 1 cut(s) 1260
BstBAI YACGTR 1 cut(s) 70
BstC8I GCNNGC 1 cut(s) 64
BstDEI CTNAG 3 cut(s) 543, 764, 951
BstEII GGTNACC 2 cut(s) 16, 524
BstF5I GGATG 3 cut(s) 607, 916, 1198
BstHHI GCGC 1 cut(s) 419
BstKTI GATC 4 cut(s) 483, 970, 1079, 1307
BstMAI GTCTC 7 cut(s) 60, 143, 169, 230, 1010, 1288, 1388
BstMBI GATC 4 cut(s) 480, 967, 1076, 1304
BstMWI GCNNNNNNNGC 5 cut(s) 230, 321, 591, 810, 1174
BstNI CCWGG 2 cut(s) 650, 1507
BstPI GGTNACC 2 cut(s) 16, 524
BstSCI CCNGG 4 cut(s) 25, 104, 648, 1505
BstSLI GKGCMC 1 cut(s) 106
BstV1I GCAGC 1 cut(s) 1180
BstXI CCANNNNNNTGG 1 cut(s) 74
BsuI GTATCC 1 cut(s) 1342
BsuRI GGCC 5 cut(s) 78, 104, 224, 585, 980
BtsCI GGATG 3 cut(s) 607, 916, 1198
BtsI GCAGTG 1 cut(s) 799
BtsIMutI CAGTG 2 cut(s) 519, 799
Cac8I GCNNGC 1 cut(s) 64
CfoI GCGC 1 cut(s) 419
Cfr10I RCCGGY 1 cut(s) 152
Cfr13I GGNCC 3 cut(s) 102, 103, 584
Csp6I GTAC 2 cut(s) 929, 1152
CspAI ACCGGT 1 cut(s) 152
CviAII CATG 4 cut(s) 261, 1212, 1438, 1552
CviQI GTAC 2 cut(s) 929, 1152
DdeI CTNAG 3 cut(s) 543, 764, 951
DpnI GATC 4 cut(s) 482, 969, 1078, 1306
DpnII GATC 4 cut(s) 480, 967, 1076, 1304
EaeI YGGCCR 1 cut(s) 978
Eam1104I CTCTTC 1 cut(s) 1260
EarI CTCTTC 1 cut(s) 1260
Eco130I CCWWGG 2 cut(s) 701, 1095
Eco24I GRGCYC 2 cut(s) 106, 860
Eco31I GGTCTC 2 cut(s) 143, 1010
Eco72I CACGTG 1 cut(s) 70
Eco91I GGTNACC 2 cut(s) 16, 524
EcoO109I RGGNCCY 1 cut(s) 102
EcoO65I GGTNACC 2 cut(s) 16, 524
EcoRI GAATTC 1 cut(s) 1258
EcoRII CCWGG 2 cut(s) 648, 1505
EcoT14I CCWWGG 2 cut(s) 701, 1095
EcoT22I ATGCAT 1 cut(s) 1333
EcoT38I GRGCYC 2 cut(s) 106, 860
ErhI CCWWGG 2 cut(s) 701, 1095
Esp3I CGTCTC 1 cut(s) 169
FaeI CATG 4 cut(s) 264, 1215, 1441, 1555
FalI AAGNNNNNCTT 4 cut(s) 442, 474, 685, 717
FaqI GGGAC 1 cut(s) 485
FatI CATG 4 cut(s) 260, 1211, 1437, 1551
FauI CCCGC 2 cut(s) 806, 1072
FblI GTMKAC 1 cut(s) 707
Fnu4HI GCNGC 4 cut(s) 110, 161, 349, 1169
FokI GGATG 3 cut(s) 614, 903, 1205
FriOI GRGCYC 2 cut(s) 106, 860
Fsp4HI GCNGC 4 cut(s) 110, 161, 349, 1169
FspBI CTAG 6 cut(s) 360, 533, 588, 837, 1091, 1400
GlaI GCGC 1 cut(s) 418
GluI GCNGC 4 cut(s) 110, 161, 349, 1169
GsaI CCCAGC 1 cut(s) 598
GsuI CTGGAG 1 cut(s) 1157
HaeIII GGCC 5 cut(s) 78, 104, 224, 585, 980
HapII CCGG 5 cut(s) 27, 106, 153, 810, 1117
HhaI GCGC 1 cut(s) 419
Hin1II CATG 4 cut(s) 264, 1215, 1441, 1555
Hin6I GCGC 1 cut(s) 417
HinP1I GCGC 1 cut(s) 417
HindIII AAGCTT 1 cut(s) 1422
HinfI GANTC 6 cut(s) 343, 1040, 1072, 1139, 1220, 1516
HpaII CCGG 5 cut(s) 27, 106, 153, 810, 1117
HphI GGTGA 4 cut(s) 10, 277, 536, 901
Hpy166II GTNNAC 2 cut(s) 642, 708
Hpy188I TCNGA 6 cut(s) 544, 942, 954, 1144, 1264, 1488
Hpy188III TCNNGA 2 cut(s) 137, 1136
Hpy8I GTNNAC 2 cut(s) 642, 708
HpyAV CCTTC 5 cut(s) 733, 768, 880, 895, 1369
HpyCH4III ACNGT 1 cut(s) 333
HpyCH4IV ACGT 2 cut(s) 69, 193
HpyCH4V TGCA 4 cut(s) 233, 1112, 1313, 1331
HpyF10VI GCNNNNNNNGC 5 cut(s) 230, 321, 591, 810, 1174
HpyF3I CTNAG 3 cut(s) 543, 764, 951
HpySE526I ACGT 2 cut(s) 69, 193
Hsp92II CATG 4 cut(s) 264, 1215, 1441, 1555
HspAI GCGC 1 cut(s) 417
Kzo9I GATC 4 cut(s) 480, 967, 1076, 1304
LguI GCTCTTC 1 cut(s) 1260
LmnI GCTCC 1 cut(s) 442
Lsp1109I GCAGC 1 cut(s) 1180
LweI GCATC 5 cut(s) 220, 511, 581, 834, 1195
MaeI CTAG 6 cut(s) 360, 533, 588, 837, 1091, 1400
MaeII ACGT 2 cut(s) 69, 193
MaeIII GTNAC 4 cut(s) 16, 291, 524, 959
MalI GATC 4 cut(s) 482, 969, 1078, 1306
MboI GATC 4 cut(s) 480, 967, 1076, 1304
MboII GAAGA 4 cut(s) 450, 744, 1277, 1478
MfeI CAATTG 1 cut(s) 974
MhlI GDGCHC 2 cut(s) 106, 860
MlyI GAGTC 1 cut(s) 1148
Mph1103I ATGCAT 1 cut(s) 1333
MroXI GAANNNNTTC 1 cut(s) 1515
MseI TTAA 6 cut(s) 377, 618, 713, 1086, 1358, 1410
MslI CAYNNNNRTG 2 cut(s) 72, 412
MspI CCGG 5 cut(s) 27, 106, 153, 810, 1117
MspR9I CCNGG 4 cut(s) 27, 106, 650, 1507
MunI CAATTG 1 cut(s) 974
MvaI CCWGG 2 cut(s) 650, 1507
MwoI GCNNNNNNNGC 5 cut(s) 230, 321, 591, 810, 1174
NciI CCSGG 2 cut(s) 27, 106
NdeII GATC 4 cut(s) 480, 967, 1076, 1304
NlaIII CATG 4 cut(s) 264, 1215, 1441, 1555
NlaIV GGNNCC 3 cut(s) 103, 104, 654
NmuCI GTSAC 3 cut(s) 16, 291, 524
NsiI ATGCAT 1 cut(s) 1333
PciSI GCTCTTC 1 cut(s) 1260
PdmI GAANNNNTTC 1 cut(s) 1515
PfeI GAWTC 5 cut(s) 343, 1040, 1072, 1220, 1516
PfoI TCCNGGA 1 cut(s) 648
PinAI ACCGGT 1 cut(s) 152
PkrI GCNGC 4 cut(s) 111, 162, 350, 1170
PleI GAGTC 1 cut(s) 1147
PmaCI CACGTG 1 cut(s) 70
PmlI CACGTG 1 cut(s) 70
PpsI GAGTC 1 cut(s) 1147
Ppu21I YACGTR 1 cut(s) 70
Psp1406I AACGTT 1 cut(s) 193
Psp6I CCWGG 2 cut(s) 648, 1505
PspCI CACGTG 1 cut(s) 70
PspEI GGTNACC 2 cut(s) 16, 524
PspFI CCCAGC 1 cut(s) 594
PspGI CCWGG 2 cut(s) 648, 1505
PspN4I GGNNCC 3 cut(s) 103, 104, 654
PspOMI GGGCCC 1 cut(s) 102
PspPI GGNCC 3 cut(s) 102, 103, 584
RsaI GTAC 2 cut(s) 930, 1153
RsaNI GTAC 2 cut(s) 929, 1152
RseI CAYNNNNRTG 2 cut(s) 72, 412
SapI GCTCTTC 1 cut(s) 1260
SaqAI TTAA 6 cut(s) 377, 618, 713, 1086, 1358, 1410
SatI GCNGC 4 cut(s) 110, 161, 349, 1169
Sau3AI GATC 4 cut(s) 480, 967, 1076, 1304
Sau96I GGNCC 3 cut(s) 102, 103, 584
ScaI AGTACT 1 cut(s) 1153
SchI GAGTC 1 cut(s) 1148
ScrFI CCNGG 4 cut(s) 27, 106, 650, 1507
SduI GDGCHC 2 cut(s) 106, 860
SfaNI GCATC 5 cut(s) 220, 511, 581, 834, 1195
SmiMI CAYNNNNRTG 2 cut(s) 72, 412
SsiI CCGC 6 cut(s) 109, 160, 349, 813, 1065, 1302
SspI AATATT 1 cut(s) 497
SspMI CTAG 6 cut(s) 360, 533, 588, 837, 1091, 1400
StyD4I CCNGG 4 cut(s) 25, 104, 648, 1505
StyI CCWWGG 2 cut(s) 701, 1095
TaaI ACNGT 1 cut(s) 333
TaiI ACGT 2 cut(s) 72, 196
TaqI TCGA 4 cut(s) 185, 1075, 1156, 1256
TatI WGTACW 1 cut(s) 1151
TauI GCSGC 3 cut(s) 112, 163, 351
TfiI GAWTC 5 cut(s) 343, 1040, 1072, 1220, 1516
Tru1I TTAA 6 cut(s) 377, 618, 713, 1086, 1358, 1410
Tru9I TTAA 6 cut(s) 377, 618, 713, 1086, 1358, 1410
TscAI CASTG 2 cut(s) 526, 799
TseFI GTSAC 3 cut(s) 16, 291, 524
TseI GCWGC 1 cut(s) 1168
Tsp45I GTSAC 3 cut(s) 16, 291, 524
TspDTI ATGAA 6 cut(s) 187, 231, 905, 984, 1416, 1521
TspGWI ACGGA 1 cut(s) 193
TspRI CASTG 2 cut(s) 526, 799
XapI RAATTY 4 cut(s) 39, 779, 1258, 1393
XmiI GTMKAC 1 cut(s) 707
XmnI GAANNNNTTC 1 cut(s) 1515
XspI CTAG 6 cut(s) 360, 533, 588, 837, 1091, 1400
ZrmI AGTACT 1 cut(s) 1153
Zsp2I ATGCAT 1 cut(s) 1333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.