ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 292 |
| AciI | CCGC | 1 cut(s) | 108 |
| AclWI | GGATC | 2 cut(s) | 35, 284 |
| AcsI | RAATTY | 1 cut(s) | 74 |
| AcuI | CTGAAG | 1 cut(s) | 345 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 107 |
| AgsI | TTSAA | 3 cut(s) | 73, 95, 269 |
| AluBI | AGCT | 4 cut(s) | 128, 265, 299, 307 |
| AluI | AGCT | 4 cut(s) | 128, 265, 299, 307 |
| Alw26I | GTCTC | 2 cut(s) | 141, 323 |
| AlwI | GGATC | 2 cut(s) | 35, 284 |
| Aor13HI | TCCGGA | 1 cut(s) | 292 |
| AoxI | GGCC | 1 cut(s) | 198 |
| ApoI | RAATTY | 1 cut(s) | 74 |
| AspS9I | GGNCC | 1 cut(s) | 59 |
| AsuHPI | GGTGA | 1 cut(s) | 421 |
| AsuNHI | GCTAGC | 1 cut(s) | 311 |
| AvaII | GGWCC | 1 cut(s) | 59 |
| BanII | GRGCYC | 1 cut(s) | 370 |
| BccI | CCATC | 2 cut(s) | 443, 447 |
| BclI | TGATCA | 1 cut(s) | 13 |
| BcoDI | GTCTC | 2 cut(s) | 141, 323 |
| BfaI | CTAG | 3 cut(s) | 84, 300, 312 |
| Bme18I | GGWCC | 1 cut(s) | 59 |
| BmgT120I | GGNCC | 1 cut(s) | 59 |
| BmsI | GCATC | 1 cut(s) | 344 |
| BmtI | GCTAGC | 1 cut(s) | 315 |
| BpmI | CTGGAG | 1 cut(s) | 232 |
| BpuEI | CTTGAG | 3 cut(s) | 211, 377, 397 |
| BsaBI | GATNNNNATC | 1 cut(s) | 39 |
| BsaWI | WCCGGW | 1 cut(s) | 292 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 28, 58 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 107 |
| Bse1I | ACTGG | 1 cut(s) | 215 |
| Bse3DI | GCAATG | 1 cut(s) | 16 |
| Bse8I | GATNNNNATC | 1 cut(s) | 39 |
| BseAI | TCCGGA | 1 cut(s) | 292 |
| BseGI | GGATG | 2 cut(s) | 335, 435 |
| BseJI | GATNNNNATC | 1 cut(s) | 39 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 107 |
| BseMI | GCAATG | 1 cut(s) | 16 |
| BseMII | CTCAG | 1 cut(s) | 383 |
| BseNI | ACTGG | 1 cut(s) | 215 |
| BshFI | GGCC | 1 cut(s) | 200 |
| BsiSI | CCGG | 1 cut(s) | 293 |
| BslFI | GGGAC | 1 cut(s) | 359 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 107 |
| BsmAI | GTCTC | 2 cut(s) | 141, 323 |
| BsmFI | GGGAC | 1 cut(s) | 359 |
| BsnI | GGCC | 1 cut(s) | 200 |
| Bsp1286I | GDGCHC | 1 cut(s) | 370 |
| Bsp13I | TCCGGA | 1 cut(s) | 292 |
| Bsp143I | GATC | 5 cut(s) | 3, 13, 40, 289, 374 |
| BspACI | CCGC | 1 cut(s) | 108 |
| BspANI | GGCC | 1 cut(s) | 200 |
| BspCNI | CTCAG | 1 cut(s) | 382 |
| BspEI | TCCGGA | 1 cut(s) | 292 |
| BspOI | GCTAGC | 1 cut(s) | 315 |
| BspPI | GGATC | 2 cut(s) | 35, 284 |
| BsrDI | GCAATG | 1 cut(s) | 16 |
| BsrI | ACTGG | 1 cut(s) | 215 |
| BssMI | GATC | 5 cut(s) | 3, 13, 40, 289, 374 |
| Bst4CI | ACNGT | 2 cut(s) | 168, 279 |
| BstC8I | GCNNGC | 2 cut(s) | 309, 313 |
| BstDEI | CTNAG | 1 cut(s) | 369 |
| BstF5I | GGATG | 2 cut(s) | 335, 435 |
| BstKTI | GATC | 5 cut(s) | 6, 16, 43, 292, 377 |
| BstMAI | GTCTC | 2 cut(s) | 141, 323 |
| BstMBI | GATC | 5 cut(s) | 3, 13, 40, 289, 374 |
| BstX2I | RGATCY | 1 cut(s) | 289 |
| BstYI | RGATCY | 1 cut(s) | 289 |
| BsuRI | GGCC | 1 cut(s) | 200 |
| BtsCI | GGATG | 2 cut(s) | 335, 435 |
| BtsIMutI | CAGTG | 4 cut(s) | 173, 194, 208, 321 |
| Cac8I | GCNNGC | 2 cut(s) | 309, 313 |
| Cfr13I | GGNCC | 1 cut(s) | 59 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 149, 184 |
| CviJI | RGCY | 9 cut(s) | 82, 98, 128, 200, 265, 299, 307, 368, 391 |
| CviKI_1 | RGCY | 9 cut(s) | 82, 98, 128, 200, 265, 299, 307, 368, 391 |
| DdeI | CTNAG | 1 cut(s) | 369 |
| DpnI | GATC | 5 cut(s) | 5, 15, 42, 291, 376 |
| DpnII | GATC | 5 cut(s) | 3, 13, 40, 289, 374 |
| Eco147I | AGGCCT | 1 cut(s) | 200 |
| Eco24I | GRGCYC | 1 cut(s) | 370 |
| Eco47I | GGWCC | 1 cut(s) | 59 |
| Eco57I | CTGAAG | 1 cut(s) | 345 |
| EcoT38I | GRGCYC | 1 cut(s) | 370 |
| FaiI | YATR | 2 cut(s) | 119, 275 |
| FaqI | GGGAC | 1 cut(s) | 359 |
| FauI | CCCGC | 1 cut(s) | 101 |
| FbaI | TGATCA | 1 cut(s) | 13 |
| FokI | GGATG | 2 cut(s) | 322, 422 |
| FriOI | GRGCYC | 1 cut(s) | 370 |
| FspBI | CTAG | 3 cut(s) | 84, 300, 312 |
| GsuI | CTGGAG | 1 cut(s) | 232 |
| HaeIII | GGCC | 1 cut(s) | 200 |
| HapII | CCGG | 1 cut(s) | 293 |
| HindIII | AAGCTT | 3 cut(s) | 126, 263, 305 |
| HinfI | GANTC | 1 cut(s) | 404 |
| HpaII | CCGG | 1 cut(s) | 293 |
| HphI | GGTGA | 1 cut(s) | 421 |
| Hpy166II | GTNNAC | 1 cut(s) | 171 |
| Hpy188I | TCNGA | 2 cut(s) | 13, 372 |
| Hpy188III | TCNNGA | 4 cut(s) | 293, 378, 394, 414 |
| Hpy8I | GTNNAC | 1 cut(s) | 171 |
| HpyAV | CCTTC | 1 cut(s) | 234 |
| HpyCH4III | ACNGT | 2 cut(s) | 168, 279 |
| HpyCH4V | TGCA | 2 cut(s) | 252, 335 |
| HpyF3I | CTNAG | 1 cut(s) | 369 |
| Kpn2I | TCCGGA | 1 cut(s) | 292 |
| Ksp22I | TGATCA | 1 cut(s) | 13 |
| Kzo9I | GATC | 5 cut(s) | 3, 13, 40, 289, 374 |
| LpnPI | CCDG | 4 cut(s) | 114, 196, 306, 384 |
| LweI | GCATC | 1 cut(s) | 344 |
| MaeI | CTAG | 3 cut(s) | 84, 300, 312 |
| MaeIII | GTNAC | 1 cut(s) | 191 |
| MalI | GATC | 5 cut(s) | 5, 15, 42, 291, 376 |
| MboI | GATC | 5 cut(s) | 3, 13, 40, 289, 374 |
| MboII | GAAGA | 2 cut(s) | 249, 338 |
| MflI | RGATCY | 1 cut(s) | 289 |
| MhlI | GDGCHC | 1 cut(s) | 370 |
| MluCI | AATT | 3 cut(s) | 74, 151, 381 |
| MmeI | TCCRAC | 2 cut(s) | 68, 432 |
| MnlI | CCTC | 3 cut(s) | 54, 346, 437 |
| MroI | TCCGGA | 1 cut(s) | 292 |
| MseI | TTAA | 3 cut(s) | 384, 456, 469 |
| MspI | CCGG | 1 cut(s) | 293 |
| NdeII | GATC | 5 cut(s) | 3, 13, 40, 289, 374 |
| NheI | GCTAGC | 1 cut(s) | 311 |
| PceI | AGGCCT | 1 cut(s) | 200 |
| PfeI | GAWTC | 1 cut(s) | 404 |
| PspPI | GGNCC | 1 cut(s) | 59 |
| PsuI | RGATCY | 1 cut(s) | 289 |
| SaqAI | TTAA | 3 cut(s) | 384, 456, 469 |
| Sau3AI | GATC | 5 cut(s) | 3, 13, 40, 289, 374 |
| Sau96I | GGNCC | 1 cut(s) | 59 |
| SduI | GDGCHC | 1 cut(s) | 370 |
| SetI | ASST | 6 cut(s) | 70, 130, 267, 301, 309, 429 |
| SfaNI | GCATC | 1 cut(s) | 344 |
| SinI | GGWCC | 1 cut(s) | 59 |
| SmlI | CTYRAG | 3 cut(s) | 226, 392, 412 |
| SmoI | CTYRAG | 3 cut(s) | 226, 392, 412 |
| Sse9I | AATT | 3 cut(s) | 74, 151, 381 |
| SseBI | AGGCCT | 1 cut(s) | 200 |
| SsiI | CCGC | 1 cut(s) | 108 |
| SspI | AATATT | 2 cut(s) | 256, 362 |
| SspMI | CTAG | 3 cut(s) | 84, 300, 312 |
| StuI | AGGCCT | 1 cut(s) | 200 |
| TaaI | ACNGT | 2 cut(s) | 168, 279 |
| TasI | AATT | 3 cut(s) | 74, 151, 381 |
| TfiI | GAWTC | 1 cut(s) | 404 |
| Tru1I | TTAA | 3 cut(s) | 384, 456, 469 |
| Tru9I | TTAA | 3 cut(s) | 384, 456, 469 |
| TscAI | CASTG | 4 cut(s) | 173, 194, 215, 328 |
| TspRI | CASTG | 4 cut(s) | 173, 194, 215, 328 |
| VpaK11BI | GGWCC | 1 cut(s) | 59 |
| XapI | RAATTY | 1 cut(s) | 74 |
| XspI | CTAG | 3 cut(s) | 84, 300, 312 |