Zinc knuckle
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 273 |
| AfaI | GTAC | 1 cut(s) | 215 |
| AflII | CTTAAG | 1 cut(s) | 152 |
| AgeI | ACCGGT | 1 cut(s) | 207 |
| AgsI | TTSAA | 1 cut(s) | 202 |
| AjnI | CCWGG | 1 cut(s) | 14 |
| AluBI | AGCT | 2 cut(s) | 151, 255 |
| AluI | AGCT | 2 cut(s) | 151, 255 |
| Alw26I | GTCTC | 1 cut(s) | 101 |
| Aor13HI | TCCGGA | 1 cut(s) | 273 |
| ApeKI | GCWGC | 1 cut(s) | 148 |
| AsiGI | ACCGGT | 1 cut(s) | 207 |
| BbvI | GCAGC | 1 cut(s) | 160 |
| BciT130I | CCWGG | 1 cut(s) | 16 |
| BclI | TGATCA | 1 cut(s) | 160 |
| BcoDI | GTCTC | 1 cut(s) | 101 |
| BfrI | CTTAAG | 1 cut(s) | 152 |
| BisI | GCNGC | 1 cut(s) | 149 |
| BlsI | GCNGC | 1 cut(s) | 150 |
| Bme1390I | CCNGG | 1 cut(s) | 16 |
| BmrFI | CCNGG | 1 cut(s) | 16 |
| BsaWI | WCCGGW | 2 cut(s) | 207, 273 |
| Bse118I | RCCGGY | 1 cut(s) | 207 |
| BseAI | TCCGGA | 1 cut(s) | 273 |
| BseBI | CCWGG | 1 cut(s) | 16 |
| BseGI | GGATG | 2 cut(s) | 38, 147 |
| BseMII | CTCAG | 1 cut(s) | 78 |
| BseXI | GCAGC | 1 cut(s) | 160 |
| BshTI | ACCGGT | 1 cut(s) | 207 |
| BsiSI | CCGG | 2 cut(s) | 208, 274 |
| BsmAI | GTCTC | 1 cut(s) | 101 |
| Bsp13I | TCCGGA | 1 cut(s) | 273 |
| Bsp143I | GATC | 2 cut(s) | 9, 160 |
| BspCNI | CTCAG | 1 cut(s) | 79 |
| BspEI | TCCGGA | 1 cut(s) | 273 |
| BspTI | CTTAAG | 1 cut(s) | 152 |
| BsrFI | RCCGGY | 1 cut(s) | 207 |
| BssAI | RCCGGY | 1 cut(s) | 207 |
| BssMI | GATC | 2 cut(s) | 9, 160 |
| Bst2UI | CCWGG | 1 cut(s) | 16 |
| Bst4CI | ACNGT | 1 cut(s) | 23 |
| Bst6I | CTCTTC | 1 cut(s) | 139 |
| BstAFI | CTTAAG | 1 cut(s) | 152 |
| BstDEI | CTNAG | 1 cut(s) | 87 |
| BstF5I | GGATG | 2 cut(s) | 38, 147 |
| BstKTI | GATC | 2 cut(s) | 12, 163 |
| BstMAI | GTCTC | 1 cut(s) | 101 |
| BstMBI | GATC | 2 cut(s) | 9, 160 |
| BstNI | CCWGG | 1 cut(s) | 16 |
| BstSCI | CCNGG | 1 cut(s) | 14 |
| BstV1I | GCAGC | 1 cut(s) | 160 |
| BtsCI | GGATG | 2 cut(s) | 38, 147 |
| Cfr10I | RCCGGY | 1 cut(s) | 207 |
| Csp6I | GTAC | 1 cut(s) | 214 |
| CspAI | ACCGGT | 1 cut(s) | 207 |
| CviJI | RGCY | 4 cut(s) | 7, 151, 231, 255 |
| CviKI_1 | RGCY | 4 cut(s) | 7, 151, 231, 255 |
| CviQI | GTAC | 1 cut(s) | 214 |
| DdeI | CTNAG | 1 cut(s) | 87 |
| DpnI | GATC | 2 cut(s) | 11, 162 |
| DpnII | GATC | 2 cut(s) | 9, 160 |
| Eam1104I | CTCTTC | 1 cut(s) | 139 |
| EarI | CTCTTC | 1 cut(s) | 139 |
| EcoRII | CCWGG | 1 cut(s) | 14 |
| FaiI | YATR | 5 cut(s) | 70, 81, 104, 114, 280 |
| FbaI | TGATCA | 1 cut(s) | 160 |
| Fnu4HI | GCNGC | 1 cut(s) | 149 |
| FokI | GGATG | 2 cut(s) | 25, 154 |
| Fsp4HI | GCNGC | 1 cut(s) | 149 |
| GluI | GCNGC | 1 cut(s) | 149 |
| HapII | CCGG | 2 cut(s) | 208, 274 |
| HindIII | AAGCTT | 1 cut(s) | 253 |
| HinfI | GANTC | 1 cut(s) | 109 |
| HpaII | CCGG | 2 cut(s) | 208, 274 |
| Hpy188III | TCNNGA | 1 cut(s) | 274 |
| HpyAV | CCTTC | 1 cut(s) | 244 |
| HpyCH4III | ACNGT | 1 cut(s) | 23 |
| HpyCH4IV | ACGT | 1 cut(s) | 216 |
| HpyCH4V | TGCA | 1 cut(s) | 287 |
| HpyF3I | CTNAG | 1 cut(s) | 87 |
| HpySE526I | ACGT | 1 cut(s) | 216 |
| Kpn2I | TCCGGA | 1 cut(s) | 273 |
| Ksp22I | TGATCA | 1 cut(s) | 160 |
| Kzo9I | GATC | 2 cut(s) | 9, 160 |
| LpnPI | CCDG | 5 cut(s) | 28, 99, 177, 221, 287 |
| Lsp1109I | GCAGC | 1 cut(s) | 160 |
| MaeII | ACGT | 1 cut(s) | 216 |
| MalI | GATC | 2 cut(s) | 11, 162 |
| MboI | GATC | 2 cut(s) | 9, 160 |
| MboII | GAAGA | 2 cut(s) | 50, 126 |
| MlyI | GAGTC | 1 cut(s) | 103 |
| MroI | TCCGGA | 1 cut(s) | 273 |
| MseI | TTAA | 1 cut(s) | 153 |
| MspCI | CTTAAG | 1 cut(s) | 152 |
| MspI | CCGG | 2 cut(s) | 208, 274 |
| MspR9I | CCNGG | 1 cut(s) | 16 |
| MvaI | CCWGG | 1 cut(s) | 16 |
| NdeII | GATC | 2 cut(s) | 9, 160 |
| PfoI | TCCNGGA | 1 cut(s) | 14 |
| PinAI | ACCGGT | 1 cut(s) | 207 |
| PkrI | GCNGC | 1 cut(s) | 150 |
| PleI | GAGTC | 1 cut(s) | 103 |
| PpsI | GAGTC | 1 cut(s) | 103 |
| Psp6I | CCWGG | 1 cut(s) | 14 |
| PspGI | CCWGG | 1 cut(s) | 14 |
| RsaI | GTAC | 1 cut(s) | 215 |
| RsaNI | GTAC | 1 cut(s) | 214 |
| SaqAI | TTAA | 1 cut(s) | 153 |
| SatI | GCNGC | 1 cut(s) | 149 |
| Sau3AI | GATC | 2 cut(s) | 9, 160 |
| SchI | GAGTC | 1 cut(s) | 103 |
| ScrFI | CCNGG | 1 cut(s) | 16 |
| SetI | ASST | 3 cut(s) | 153, 219, 257 |
| SmlI | CTYRAG | 1 cut(s) | 152 |
| SmoI | CTYRAG | 1 cut(s) | 152 |
| StyD4I | CCNGG | 1 cut(s) | 14 |
| TaaI | ACNGT | 1 cut(s) | 23 |
| TaiI | ACGT | 1 cut(s) | 219 |
| TaqI | TCGA | 1 cut(s) | 246 |
| Tru1I | TTAA | 1 cut(s) | 153 |
| Tru9I | TTAA | 1 cut(s) | 153 |
| TseI | GCWGC | 1 cut(s) | 148 |
| TspDTI | ATGAA | 1 cut(s) | 158 |
| Vha464I | CTTAAG | 1 cut(s) | 152 |