RLG00000018387

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000147
Physical Location & Seq
Reverse (-)
29085957 .. 29087636
1680 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018387

Sequence Viewer

Length: 1215 bp
ATGGCGTCTCCTCATAATTCTCCACCTAAGTCTCCAGAACCTTCTAAGTCTCCAGTCCCATCCCCTCCACCATCTCCAGTGTTGCCCATACCTTTTGGGGAGGGGTCAAGTTCTCATACTCATGCGTTTCCTGATGAATCGCATCATCAATCACCTCCACTACACTCTCCGTTTTTTGTTCAGCGTGGGCCCTATGCTATTCCGTTTACTACTCAGCCACCTATTGTTGATCTCCTCGATGATCCTTCAGAGGCCACGTCTGTTGATCCGGGTAAGAGATGTCTTGTTGGACAAGTGTTTGGTGAACCTGTCTCGGTTAAGAGCATTAGAGCTCGTTGTCAGGCTAGCTGGAAGGGATTGATGGGTGGTTTTCAACTTAGCTCTTATGGACCTGACTGGATTCGTATCACTTTTGATTGTGAGGAAGATCTCATATATGTTCTTAATAACAAACCGTGGGCACCAAGGAGGAATTTCCTTATGCTTCCTCGGAATCAGAATGAACCTCAAAGCATCCCTAACCAAGCCCAAGCTTCTACTAAAATTCCGTGTCCTATTCCAAACGAAACTTTGTTCGTTTTTCCAAGCATTAGGGGTCCTAATCAGGGCGTACCCTTTTCCCCAACTCGATCTACTACCCCTTCTTATCAGGGTCCACCCCGTAATCCTTTAGCTTCTGCTACTAGATCTTCACATACTCCTGGTCGTTATGCTCCTCGTTCCAACTTTCGACGCCCTGGAGTCACTTTTGTTGATGCTATTCGTAATTTGCATGATACTGTACAAACTGATGATGTTCATGCTCACCATAGTGCAACTAATCCATCTTTCACTCATGCTAGCTCTGCTTCCCAGCCATTGGTTGTACCATTTCGGGAGTCGGAACCTATTCCTCCTACTCTCCCTAATGATGCGTCCAATCTCGGTGTTAATGATGATGACCTTGCCGCGGATGAGGAACTTGATCAGGACTTAGAGGCTGAGGTTGACGAGGATGTTGAAGTTGATGAGGAGGTTGAAGTTGACGAGAATGTTGATGTTGAGGAGGTAAGTTCTGCTGCTTTTTCTTTTTTATCTTTGACTGCTTTTGAGCATTCTGTGGTTACCTCTGATACTGTTGACGACTTACTGGTTCATGACACTGAGTCTGTGAATTTTCCTGTTTTATTTTACACTTTTGAGAATATAAATCGTGCTTATGTCCATTCTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

405

Amino Acids

44.31

Weight (kDa)

4.73

Isoelectric Point (pI)

55.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 92 - 162 1.6e-06 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000147)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10354 FvH4_1g17131 FvH4_2g11611 FvH4_2g33851 FvH4_3g32112 FvH4_3g35052 FvH4_3g44611 FvH4_4g05921 FvH4_4g06411 FvH4_4g06792 FvH4_4g10365 FvH4_4g21422 FvH4_4g22401 FvH4_4g30261 FvH4_5g08843 FvH4_5g14731 FvH4_5g24781 FvH4_5g26231 FvH4_5g31282 FvH4_6g23371 FvH4_6g38511 FvH4_7g01171 FvH4_7g03341 FvH4_7g06171 FvH4_7g32472
prunus_persica Prupe.2G036900_v2.0.a1
pyrus_communis pycom02g19900 pycom03g01520 pycom05g10510 pycom16g23820
rosa_chinensis RchiOBHm_Chr1g0316031 RchiOBHm_Chr1g0342451 RchiOBHm_Chr1g0344541 RchiOBHm_Chr1g0364721 RchiOBHm_Chr2g0133541 RchiOBHm_Chr2g0134511 RchiOBHm_Chr2g0145891 RchiOBHm_Chr2g0163241 RchiOBHm_Chr5g0027201 RchiOBHm_Chr5g0027881 RchiOBHm_Chr5g0047471 RchiOBHm_Chr7g0210901
rosa_laevigata RLG00000011116 RLG00000017964 RLG00000018128 RLG00000018387 RLG00000018829 RLG00000019353 RLG00000028973 RLG00000035870 RLG00000036629
rosa_multiflora Rmu_co8126340.1_g000001 Rmu_co8216750.1_g000001 Rmu_co8222072.1_g000001 Rmu_co8332453.1_g000001 Rmu_co8349913.1_g000001 Rmu_co8405337.1_g000001 Rmu_sc0000041.1_g000012 Rmu_sc0000166.1_g000029 Rmu_sc0000251.1_g000019 Rmu_sc0000271.1_g000028 Rmu_sc0000509.1_g000036 Rmu_sc0000543.1_g000048 Rmu_sc0000808.1_g000003 Rmu_sc0000847.1_g000040 Rmu_sc0000972.1_g000020 Rmu_sc0001260.1_g000001 Rmu_sc0001464.1_g000026 Rmu_sc0001616.1_g000003 Rmu_sc0001669.1_g000001 Rmu_sc0002005.1_g000001 Rmu_sc0002014.1_g000010 Rmu_sc0002082.1_g000033 Rmu_sc0002302.1_g000024 Rmu_sc0002531.1_g000045 Rmu_sc0003276.1_g000002 Rmu_sc0003737.1_g000007 Rmu_sc0003832.1_g000022 Rmu_sc0004080.1_g000011 Rmu_sc0004487.1_g000009 Rmu_sc0004988.1_g000018 Rmu_sc0004988.1_g000019 Rmu_sc0005254.1_g000002 Rmu_sc0005733.1_g000004 Rmu_sc0006413.1_g000006 Rmu_sc0007121.1_g000013 Rmu_sc0007869.1_g000006 Rmu_sc0008035.1_g000015 Rmu_sc0008279.1_g000017 Rmu_sc0008351.1_g000014 Rmu_sc0008957.1_g000007 Rmu_sc0009012.1_g000007 Rmu_sc0010556.1_g000009 Rmu_sc0012889.1_g000003 Rmu_sc0019808.1_g000004 Rmu_sc0028113.1_g000001 Rmu_sc0031202.1_g000001 Rmu_sc0034436.1_g000001 Rmu_sc0034445.1_g000001 Rmu_sc0040044.1_g000001 Rmu_ssc0000062.1_g000032 Rmu_ssc0000372.1_g000018
rosa_roxburghii Rroxscaffold_1G00001520 Rroxscaffold_1G00039990 Rroxscaffold_1G00046370 Rroxscaffold_2G00110140 Rroxscaffold_2G00131420 Rroxscaffold_3G00222390 Rroxscaffold_5G00336040 Rroxscaffold_5G00338000 Rroxscaffold_5G00344030 Rroxscaffold_5G00363460 Rroxscaffold_6G00402000 Rroxscaffold_7G00194940
rosa_rugosa Rorug01G0106500 Rorug01G0111300 Rorug01G0247000 Rorug02G0318100.1 Rorug02G0318200 Rorug02G0459500 Rorug03G0108100 Rorug03G0200500 Rorug03G0232500 Rorug03G0240600 Rorug04G0105300 Rorug04G0256600 Rorug06G0079300 Rorug06G0082700 Rorug06G0095600 Rorug06G0179000 Rorug07G0113500 Rorug07G0271100
rosa_samantha Rh1AG087200 Rh1CG085300 Rh1DG013200 Rh1DG091700 Rh1DG091800 Rh1DG338300 Rh2AG375400 Rh2AG407000 Rh2AG513500 Rh2BG277700 Rh2BG371200 Rh2BG376100 Rh2BG580500 Rh2CG354300 Rh2DG200100 Rh2DG388000 Rh2DG393500 Rh2DG426400 Rh3CG304800 Rh4AG044600 Rh4AG220500 Rh4BG379300 Rh4CG007100 Rh4CG030300 Rh4CG038000 Rh4CG114900 Rh4CG393700 Rh5AG124900 Rh5AG342300 Rh5BG414400 Rh5CG263800 Rh5CG439000 Rh5DG231100 Rh5DG566900 Rh6AG138600 Rh6AG200000 Rh6AG253100 Rh6AG390900 Rh6AG441600 Rh6BG194700 Rh6BG225800 Rh6BG256100 Rh6CG231700 Rh6CG231900 Rh6CG312200 Rh6CG453700 Rh6DG219400 Rh7AG357700 Rh7AG442000 Rh7CG425700 Rh7CG474600 Rh7CG494100 Rh7DG253900 Rh7DG294700 Rh7DG401600 Rh7DG461300
rosa_wichuraiana Rw1G001190 Rw2G047020 Rw4G003490 Rw5G039690 Rw6G010450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 460
AccB7I CCANNNNNTGG 1 cut(s) 859
AccII CGCG 1 cut(s) 950
AciI CCGC 2 cut(s) 948, 950
AclWI GGATC 2 cut(s) 236, 260
AcsI RAATTY 3 cut(s) 472, 543, 1153
AcuI CTGAAG 1 cut(s) 231
AcyI GRCGYC 2 cut(s) 5, 733
AfaI GTAC 3 cut(s) 612, 783, 867
AfiI CCNNNNNNNGG 3 cut(s) 605, 859, 949
AgsI TTSAA 3 cut(s) 374, 1001, 1019
AhdI GACNNNNNGTC 1 cut(s) 1144
AjiI CACGTC 1 cut(s) 258
AjnI CCWGG 2 cut(s) 700, 736
AleI CACNNNNGTG 1 cut(s) 810
AluBI AGCT 6 cut(s) 332, 348, 381, 533, 674, 843
AluI AGCT 6 cut(s) 332, 348, 381, 533, 674, 843
Alw21I GWGCWC 1 cut(s) 334
Alw26I GTCTC 4 cut(s) 12, 36, 54, 316
AlwI GGATC 2 cut(s) 236, 260
AoxI GGCC 2 cut(s) 188, 252
ApaI GGGCCC 1 cut(s) 192
ApeKI GCWGC 1 cut(s) 1058
ApoI RAATTY 3 cut(s) 472, 543, 1153
Asp700I GAANNNNTTC 1 cut(s) 888
AspS9I GGNCC 5 cut(s) 188, 189, 389, 596, 653
AsuC2I CCSGG 1 cut(s) 270
AsuHPI GGTGA 3 cut(s) 144, 314, 797
AsuNHI GCTAGC 2 cut(s) 344, 839
AvaII GGWCC 3 cut(s) 389, 596, 653
BaeGI GKGCMC 2 cut(s) 192, 463
BanI GGYRCC 1 cut(s) 460
BanII GRGCYC 2 cut(s) 192, 334
Bbv12I GWGCWC 1 cut(s) 334
BbvCI CCTCAGC 1 cut(s) 981
BbvI GCAGC 1 cut(s) 1045
BccI CCATC 4 cut(s) 67, 79, 355, 832
BciT130I CCWGG 2 cut(s) 702, 738
BclI TGATCA 1 cut(s) 964
BcnI CCSGG 1 cut(s) 270
BcoDI GTCTC 4 cut(s) 12, 36, 54, 316
BfaI CTAG 3 cut(s) 345, 684, 840
BglII AGATCT 2 cut(s) 427, 686
BisI GCNGC 2 cut(s) 948, 1059
BlsI GCNGC 2 cut(s) 949, 1060
Bme1390I CCNGG 3 cut(s) 270, 702, 738
Bme18I GGWCC 3 cut(s) 389, 596, 653
BmeRI GACNNNNNGTC 1 cut(s) 1144
BmgBI CACGTC 1 cut(s) 258
BmgT120I GGNCC 5 cut(s) 188, 189, 389, 596, 653
BmiI GGNNCC 5 cut(s) 190, 462, 597, 654, 885
BmrFI CCNGG 3 cut(s) 270, 702, 738
BmsI GCATC 4 cut(s) 151, 522, 745, 901
BmtI GCTAGC 2 cut(s) 348, 843
BpmI CTGGAG 4 cut(s) 18, 36, 60, 759
Bpu10I CCTNAGC 1 cut(s) 981
BpuMI CCSGG 1 cut(s) 270
BsaBI GATNNNNATC 1 cut(s) 404
BsaHI GRCGYC 2 cut(s) 5, 733
BsaJI CCNNGG 5 cut(s) 455, 464, 488, 736, 948
Bsc4I CCNNNNNNNGG 3 cut(s) 605, 859, 949
Bse1I ACTGG 4 cut(s) 53, 77, 401, 1134
Bse8I GATNNNNATC 1 cut(s) 404
BseBI CCWGG 2 cut(s) 702, 738
BseDI CCNNGG 5 cut(s) 455, 464, 488, 736, 948
BseGI GGATG 4 cut(s) 59, 513, 958, 1000
BseJI GATNNNNATC 1 cut(s) 404
BseLI CCNNNNNNNGG 3 cut(s) 605, 859, 949
BseMII CTCAG 3 cut(s) 227, 972, 1134
BseNI ACTGG 4 cut(s) 53, 77, 401, 1134
BseRI GAGGAG 4 cut(s) 224, 705, 1025, 1058
BseSI GKGCMC 2 cut(s) 192, 463
BseXI GCAGC 1 cut(s) 1045
BseYI CCCAGC 1 cut(s) 852
Bsh1236I CGCG 1 cut(s) 950
BshFI GGCC 2 cut(s) 190, 254
BshNI GGYRCC 1 cut(s) 460
BsiHKAI GWGCWC 1 cut(s) 334
BsiSI CCGG 1 cut(s) 269
BslFI GGGAC 1 cut(s) 41
BslI CCNNNNNNNGG 3 cut(s) 605, 859, 949
BsmAI GTCTC 4 cut(s) 12, 36, 54, 316
BsmBI CGTCTC 1 cut(s) 12
BsmFI GGGAC 1 cut(s) 41
BsmI GAATGC 1 cut(s) 1093
BsnI GGCC 2 cut(s) 190, 254
Bsp120I GGGCCC 1 cut(s) 188
Bsp1286I GDGCHC 3 cut(s) 192, 334, 463
Bsp1407I TGTACA 1 cut(s) 781
Bsp143I GATC 7 cut(s) 229, 241, 265, 427, 629, 686, 964
BspACI CCGC 2 cut(s) 948, 950
BspANI GGCC 2 cut(s) 190, 254
BspCNI CTCAG 3 cut(s) 226, 973, 1135
BspFNI CGCG 1 cut(s) 950
BspHI TCATGA 1 cut(s) 1135
BspLI GGNNCC 5 cut(s) 190, 462, 597, 654, 885
BspOI GCTAGC 2 cut(s) 348, 843
BspPI GGATC 2 cut(s) 236, 260
BspT107I GGYRCC 1 cut(s) 460
BsrGI TGTACA 1 cut(s) 781
BsrI ACTGG 4 cut(s) 53, 77, 401, 1134
BssECI CCNNGG 5 cut(s) 455, 464, 488, 736, 948
BssMI GATC 7 cut(s) 229, 241, 265, 427, 629, 686, 964
BssNI GRCGYC 2 cut(s) 5, 733
BssT1I CCWWGG 1 cut(s) 464
Bst2UI CCWGG 2 cut(s) 702, 738
Bst4CI ACNGT 3 cut(s) 456, 781, 1117
BstACI GRCGYC 2 cut(s) 5, 733
BstAUI TGTACA 1 cut(s) 781
BstC8I GCNNGC 2 cut(s) 346, 841
BstDEI CTNAG 8 cut(s) 27, 45, 213, 377, 973, 981, 1143, 1212
BstDSI CCRYGG 2 cut(s) 455, 948
BstEII GGTNACC 1 cut(s) 1102
BstF5I GGATG 4 cut(s) 59, 513, 958, 1000
BstFNI CGCG 1 cut(s) 950
BstKTI GATC 7 cut(s) 232, 244, 268, 430, 632, 689, 967
BstMAI GTCTC 4 cut(s) 12, 36, 54, 316
BstMBI GATC 7 cut(s) 229, 241, 265, 427, 629, 686, 964
BstMWI GCNNNNNNNGC 1 cut(s) 845
BstNI CCWGG 2 cut(s) 702, 738
BstPI GGTNACC 1 cut(s) 1102
BstSCI CCNGG 3 cut(s) 268, 700, 736
BstSLI GKGCMC 2 cut(s) 192, 463
BstUI CGCG 1 cut(s) 950
BstV1I GCAGC 1 cut(s) 1045
BstX2I RGATCY 2 cut(s) 427, 686
BstYI RGATCY 2 cut(s) 427, 686
BsuRI GGCC 2 cut(s) 190, 254
BtgI CCRYGG 2 cut(s) 455, 948
BtrI CACGTC 1 cut(s) 258
BtsCI GGATG 4 cut(s) 59, 513, 958, 1000
BtsIMutI CAGTG 2 cut(s) 84, 1140
Cac8I GCNNGC 2 cut(s) 346, 841
CciI TCATGA 1 cut(s) 1135
Cfr13I GGNCC 5 cut(s) 188, 189, 389, 596, 653
Cfr42I CCGCGG 1 cut(s) 951
CseI GACGC 2 cut(s) 741, 903
Csp6I GTAC 3 cut(s) 611, 782, 866
CspCI CAANNNNNGTGG 2 cut(s) 244, 279
CviAII CATG 5 cut(s) 122, 773, 800, 836, 1136
CviQI GTAC 3 cut(s) 611, 782, 866
DdeI CTNAG 8 cut(s) 27, 45, 213, 377, 973, 981, 1143, 1212
DpnI GATC 7 cut(s) 231, 243, 267, 429, 631, 688, 966
DpnII GATC 7 cut(s) 229, 241, 265, 427, 629, 686, 964
DriI GACNNNNNGTC 1 cut(s) 1144
Eam1105I GACNNNNNGTC 1 cut(s) 1144
Ecl136II GAGCTC 1 cut(s) 332
Eco130I CCWWGG 1 cut(s) 464
Eco24I GRGCYC 2 cut(s) 192, 334
Eco47I GGWCC 3 cut(s) 389, 596, 653
Eco53kI GAGCTC 1 cut(s) 332
Eco57I CTGAAG 1 cut(s) 231
Eco91I GGTNACC 1 cut(s) 1102
EcoICRI GAGCTC 1 cut(s) 332
EcoO109I RGGNCCY 2 cut(s) 189, 596
EcoO65I GGTNACC 1 cut(s) 1102
EcoRII CCWGG 2 cut(s) 700, 736
EcoT14I CCWWGG 1 cut(s) 464
EcoT38I GRGCYC 2 cut(s) 192, 334
ErhI CCWWGG 1 cut(s) 464
Esp3I CGTCTC 1 cut(s) 12
FaeI CATG 5 cut(s) 125, 776, 803, 839, 1139
FaqI GGGAC 1 cut(s) 41
FatI CATG 5 cut(s) 121, 772, 799, 835, 1135
FbaI TGATCA 1 cut(s) 964
Fnu4HI GCNGC 2 cut(s) 948, 1059
FokI GGATG 4 cut(s) 46, 500, 965, 1007
FriOI GRGCYC 2 cut(s) 192, 334
Fsp4HI GCNGC 2 cut(s) 948, 1059
FspBI CTAG 3 cut(s) 345, 684, 840
GluI GCNGC 2 cut(s) 948, 1059
GsaI CCCAGC 1 cut(s) 856
GsuI CTGGAG 4 cut(s) 18, 36, 60, 759
HaeIII GGCC 2 cut(s) 190, 254
HapII CCGG 1 cut(s) 269
HgaI GACGC 2 cut(s) 741, 903
Hin1I GRCGYC 2 cut(s) 5, 733
Hin1II CATG 5 cut(s) 125, 776, 803, 839, 1139
HincII GTYRAC 3 cut(s) 988, 1024, 1120
HindII GTYRAC 3 cut(s) 988, 1024, 1120
HindIII AAGCTT 1 cut(s) 531
HinfI GANTC 6 cut(s) 137, 400, 493, 741, 878, 1145
HpaII CCGG 1 cut(s) 269
HphI GGTGA 3 cut(s) 144, 314, 797
Hpy166II GTNNAC 6 cut(s) 207, 305, 656, 988, 1024, 1120
Hpy188I TCNGA 5 cut(s) 250, 492, 498, 883, 1111
Hpy188III TCNNGA 5 cut(s) 35, 131, 875, 968, 1136
Hpy8I GTNNAC 6 cut(s) 207, 305, 656, 988, 1024, 1120
Hpy99I CGWCG 1 cut(s) 735
HpyAV CCTTC 4 cut(s) 51, 255, 346, 651
HpyCH4III ACNGT 3 cut(s) 456, 781, 1117
HpyCH4IV ACGT 1 cut(s) 257
HpyCH4V TGCA 2 cut(s) 772, 815
HpyF10VI GCNNNNNNNGC 1 cut(s) 845
HpyF3I CTNAG 8 cut(s) 27, 45, 213, 377, 973, 981, 1143, 1212
HpySE526I ACGT 1 cut(s) 257
Hsp92I GRCGYC 2 cut(s) 5, 733
Hsp92II CATG 5 cut(s) 125, 776, 803, 839, 1139
Ksp22I TGATCA 1 cut(s) 964
KspI CCGCGG 1 cut(s) 951
Kzo9I GATC 7 cut(s) 229, 241, 265, 427, 629, 686, 964
LmnI GCTCC 1 cut(s) 718
Lsp1109I GCAGC 1 cut(s) 1045
LweI GCATC 4 cut(s) 151, 522, 745, 901
MaeI CTAG 3 cut(s) 345, 684, 840
MaeII ACGT 1 cut(s) 257
MaeIII GTNAC 2 cut(s) 742, 1102
MalI GATC 7 cut(s) 231, 243, 267, 429, 631, 688, 966
MboI GATC 7 cut(s) 229, 241, 265, 427, 629, 686, 964
MboII GAAGA 2 cut(s) 437, 681
MflI RGATCY 2 cut(s) 427, 686
MhlI GDGCHC 3 cut(s) 192, 334, 463
MluCI AATT 5 cut(s) 16, 472, 543, 766, 1153
MlyI GAGTC 3 cut(s) 750, 887, 1154
MmeI TCCRAC 3 cut(s) 268, 747, 861
MroXI GAANNNNTTC 1 cut(s) 888
MseI TTAA 3 cut(s) 318, 444, 930
MslI CAYNNNNRTG 2 cut(s) 120, 810
MspA1I CMGCKG 1 cut(s) 950
MspI CCGG 1 cut(s) 269
MspR9I CCNGG 3 cut(s) 270, 702, 738
Mva1269I GAATGC 1 cut(s) 1093
MvaI CCWGG 2 cut(s) 702, 738
MvnI CGCG 1 cut(s) 950
MwoI GCNNNNNNNGC 1 cut(s) 845
NciI CCSGG 1 cut(s) 270
NdeII GATC 7 cut(s) 229, 241, 265, 427, 629, 686, 964
NheI GCTAGC 2 cut(s) 344, 839
NlaIII CATG 5 cut(s) 125, 776, 803, 839, 1139
NlaIV GGNNCC 5 cut(s) 190, 462, 597, 654, 885
NmuCI GTSAC 1 cut(s) 742
OliI CACNNNNGTG 1 cut(s) 810
PagI TCATGA 1 cut(s) 1135
PctI GAATGC 1 cut(s) 1093
PdmI GAANNNNTTC 1 cut(s) 888
PfeI GAWTC 3 cut(s) 137, 400, 493
PflMI CCANNNNNTGG 1 cut(s) 859
PkrI GCNGC 2 cut(s) 949, 1060
PleI GAGTC 3 cut(s) 749, 886, 1153
PpsI GAGTC 3 cut(s) 749, 886, 1153
PpuMI RGGWCCY 1 cut(s) 596
Psp124BI GAGCTC 1 cut(s) 334
Psp5II RGGWCCY 1 cut(s) 596
Psp6I CCWGG 2 cut(s) 700, 736
PspEI GGTNACC 1 cut(s) 1102
PspFI CCCAGC 1 cut(s) 852
PspGI CCWGG 2 cut(s) 700, 736
PspN4I GGNNCC 5 cut(s) 190, 462, 597, 654, 885
PspOMI GGGCCC 1 cut(s) 188
PspPI GGNCC 5 cut(s) 188, 189, 389, 596, 653
PspPPI RGGWCCY 1 cut(s) 596
PsuI RGATCY 2 cut(s) 427, 686
RsaI GTAC 3 cut(s) 612, 783, 867
RsaNI GTAC 3 cut(s) 611, 782, 866
RseI CAYNNNNRTG 2 cut(s) 120, 810
SacI GAGCTC 1 cut(s) 334
SacII CCGCGG 1 cut(s) 951
SaqAI TTAA 3 cut(s) 318, 444, 930
SatI GCNGC 2 cut(s) 948, 1059
Sau3AI GATC 7 cut(s) 229, 241, 265, 427, 629, 686, 964
Sau96I GGNCC 5 cut(s) 188, 189, 389, 596, 653
SchI GAGTC 3 cut(s) 750, 887, 1154
ScrFI CCNGG 3 cut(s) 270, 702, 738
SduI GDGCHC 3 cut(s) 192, 334, 463
SfaNI GCATC 4 cut(s) 151, 522, 745, 901
Sfr303I CCGCGG 1 cut(s) 951
SgrBI CCGCGG 1 cut(s) 951
SinI GGWCC 3 cut(s) 389, 596, 653
SmiMI CAYNNNNRTG 2 cut(s) 120, 810
Sse9I AATT 5 cut(s) 16, 472, 543, 766, 1153
SsiI CCGC 2 cut(s) 948, 950
SspMI CTAG 3 cut(s) 345, 684, 840
SstI GAGCTC 1 cut(s) 334
StyD4I CCNGG 3 cut(s) 268, 700, 736
StyI CCWWGG 1 cut(s) 464
TaaI ACNGT 3 cut(s) 456, 781, 1117
TaiI ACGT 1 cut(s) 260
TaqI TCGA 3 cut(s) 237, 628, 730
TasI AATT 5 cut(s) 16, 472, 543, 766, 1153
TatI WGTACW 1 cut(s) 781
TauI GCSGC 1 cut(s) 950
TfiI GAWTC 3 cut(s) 137, 400, 493
Tru1I TTAA 3 cut(s) 318, 444, 930
Tru9I TTAA 3 cut(s) 318, 444, 930
TscAI CASTG 2 cut(s) 84, 1147
TseFI GTSAC 1 cut(s) 742
TseI GCWGC 1 cut(s) 1058
Tsp45I GTSAC 1 cut(s) 742
TspDTI ATGAA 4 cut(s) 150, 516, 788, 1124
TspGWI ACGGA 3 cut(s) 159, 192, 537
TspRI CASTG 2 cut(s) 84, 1147
Van91I CCANNNNNTGG 1 cut(s) 859
VpaK11BI GGWCC 3 cut(s) 389, 596, 653
XapI RAATTY 3 cut(s) 472, 543, 1153
XmnI GAANNNNTTC 1 cut(s) 888
XspI CTAG 3 cut(s) 345, 684, 840
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.