FvH4_6g38511

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000147
Physical Location & Seq
Forward (+)
30456442 .. 30459911
3470 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g38511.t1

Sequence Viewer

Length: 1665 bp
ATGGCCTGGTTTTCGAGGCTTTTCATGCTCATCTCCTCCTCTCTTACCTTCAACAGCGATTCGAGTGTGATTGGGTTCGAATCTGTGGATGTTTGTGAGGATATTGGCCAGCCAATCTTGGCAATTTGGTGGCTTGAGGATCGGTTGTCGGATGAGAAATGGCTACCTCTTACGTTGTTGTGTGCCCGTATAAAGATCCTGGGGGTTAAATCTTTTCATGAAGGTGATGATTGCCCAGTCTTTCTCAAGGACAAATCTACTTATGGTCATGGTCATGTTCTTCGCCTTCCTGGACTTGTCTTGAATCAGGTAAAATTAGACCAGATACTGTCATGGAATAGTCAGGGAAGTGCCTGGGATGGTTTTGTGGCACAATCCCATTTCTATGTTTCTTGCTTAGTTCCTGATGTTTTTTATATTATGGATACCAGAGCTGCAGCCAATACTCTGGATAAATTGAAAAAGCTTTATTTTGATGATGCCTTTGTTATTCCTGCTTTGGGACAATGTGGAGGTCTTGTGCTTCTTTGGAAAACCTCTTCTGTTAAAATTGATGTGATTCATTCTCATGATAGGTTTATTCATTGCCTCATTACTGACCACAGAGACTCTAAATCTACCTATGCAATGTTTGTGTATGCTTTTCCTCAGAAACCAAAACAAGCGGCTCTCTGGAATGATTTAGCTTGTCTGAAGCCTGCAAACCATGAAAATTGGCTCCTTATTGGCAATTTTAATGCCATCACTTGTTTGGATGAAAAACTTGGCGGTAACCAAGTGGTCACTCAATATATGATTAATTTTTATGATTTCTTAAACAGCTCAGATCTTTTCTCTCTCAGAGCTTCTGGTTTGCCTTATACTTGGACAAATAAACATGAAGATGGTACTCTTATTTTTGAGAGACTTGATAGAGCTTGTGTGAACACAAATTTACTAAATGATTGTCCGGATATCTCCCTAGAAAACCTTCCAATTATAGGTTCAGATCATGGACCTGTTTGCCTCACTCTGAATGACACTAAAAAGAAAGTTGCTAAAAGCTTCAAATTTGAAGCAATCTGGCTTTCTCACAAAGACTTCAAACCCTTGGTGGAACTTTATTGGAAACAGAATTTAAACGATAACCCCTTGTTAAATTTCACTACTATTGCAGGTCAATTTGCCAATCAAGCAAAGCAATGGAGCAAGAATGTGCTTGGAAGTCTCACCAGACAGCTAGAAGACTTAAATGAACGAGCCAGCGTTATACAACAACAACTAATGATTTCTCCAATGTCTAACTATTTAAAGGAACAAGATCTCAAGACTAAAGAGGAATTCTTGAAACTTTACAGGGAAGAAGAACTCTTCTGGGCTCAGAGAGCAAAGGCAAATTGGCTCAATTTGGGTGACAGGAATACGAGATTTTTCCAAGCTCAGGCTAACATAAGAAGGAAATCTAACTATATTTCTAAAATTAAAGATAATGCTGGAAATTGGGCCACTTCTGAACAAGATATTGTTGATGTATTGTTACAGGATTTTAAAAAACGTTTTCACATGGACTCTGCTCCTAGCCATAATGCTCTTGACGATTTTATTTCCGCAAGGAAAAAGCAAAATAACTCTACTGCTTGGAATGGAGTATTGGACTCAAGAGAACTGATACTTAAAGGTATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

555

Amino Acids

63.43

Weight (kDa)

6.54

Isoelectric Point (pI)

34.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000147)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10354 FvH4_1g17131 FvH4_2g11611 FvH4_2g33851 FvH4_3g32112 FvH4_3g35052 FvH4_3g44611 FvH4_4g05921 FvH4_4g06411 FvH4_4g06792 FvH4_4g10365 FvH4_4g21422 FvH4_4g22401 FvH4_4g30261 FvH4_5g08843 FvH4_5g14731 FvH4_5g24781 FvH4_5g26231 FvH4_5g31282 FvH4_6g23371 FvH4_6g38511 FvH4_7g01171 FvH4_7g03341 FvH4_7g06171 FvH4_7g32472
prunus_persica Prupe.2G036900_v2.0.a1
pyrus_communis pycom02g19900 pycom03g01520 pycom05g10510 pycom16g23820
rosa_chinensis RchiOBHm_Chr1g0316031 RchiOBHm_Chr1g0342451 RchiOBHm_Chr1g0344541 RchiOBHm_Chr1g0364721 RchiOBHm_Chr2g0133541 RchiOBHm_Chr2g0134511 RchiOBHm_Chr2g0145891 RchiOBHm_Chr2g0163241 RchiOBHm_Chr5g0027201 RchiOBHm_Chr5g0027881 RchiOBHm_Chr5g0047471 RchiOBHm_Chr7g0210901
rosa_laevigata RLG00000011116 RLG00000017964 RLG00000018128 RLG00000018387 RLG00000018829 RLG00000019353 RLG00000028973 RLG00000035870 RLG00000036629
rosa_multiflora Rmu_co8126340.1_g000001 Rmu_co8216750.1_g000001 Rmu_co8222072.1_g000001 Rmu_co8332453.1_g000001 Rmu_co8349913.1_g000001 Rmu_co8405337.1_g000001 Rmu_sc0000041.1_g000012 Rmu_sc0000166.1_g000029 Rmu_sc0000251.1_g000019 Rmu_sc0000271.1_g000028 Rmu_sc0000509.1_g000036 Rmu_sc0000543.1_g000048 Rmu_sc0000808.1_g000003 Rmu_sc0000847.1_g000040 Rmu_sc0000972.1_g000020 Rmu_sc0001260.1_g000001 Rmu_sc0001464.1_g000026 Rmu_sc0001616.1_g000003 Rmu_sc0001669.1_g000001 Rmu_sc0002005.1_g000001 Rmu_sc0002014.1_g000010 Rmu_sc0002082.1_g000033 Rmu_sc0002302.1_g000024 Rmu_sc0002531.1_g000045 Rmu_sc0003276.1_g000002 Rmu_sc0003737.1_g000007 Rmu_sc0003832.1_g000022 Rmu_sc0004080.1_g000011 Rmu_sc0004487.1_g000009 Rmu_sc0004988.1_g000018 Rmu_sc0004988.1_g000019 Rmu_sc0005254.1_g000002 Rmu_sc0005733.1_g000004 Rmu_sc0006413.1_g000006 Rmu_sc0007121.1_g000013 Rmu_sc0007869.1_g000006 Rmu_sc0008035.1_g000015 Rmu_sc0008279.1_g000017 Rmu_sc0008351.1_g000014 Rmu_sc0008957.1_g000007 Rmu_sc0009012.1_g000007 Rmu_sc0010556.1_g000009 Rmu_sc0012889.1_g000003 Rmu_sc0019808.1_g000004 Rmu_sc0028113.1_g000001 Rmu_sc0031202.1_g000001 Rmu_sc0034436.1_g000001 Rmu_sc0034445.1_g000001 Rmu_sc0040044.1_g000001 Rmu_ssc0000062.1_g000032 Rmu_ssc0000372.1_g000018
rosa_roxburghii Rroxscaffold_1G00001520 Rroxscaffold_1G00039990 Rroxscaffold_1G00046370 Rroxscaffold_2G00110140 Rroxscaffold_2G00131420 Rroxscaffold_3G00222390 Rroxscaffold_5G00336040 Rroxscaffold_5G00338000 Rroxscaffold_5G00344030 Rroxscaffold_5G00363460 Rroxscaffold_6G00402000 Rroxscaffold_7G00194940
rosa_rugosa Rorug01G0106500 Rorug01G0111300 Rorug01G0247000 Rorug02G0318100.1 Rorug02G0318200 Rorug02G0459500 Rorug03G0108100 Rorug03G0200500 Rorug03G0232500 Rorug03G0240600 Rorug04G0105300 Rorug04G0256600 Rorug06G0079300 Rorug06G0082700 Rorug06G0095600 Rorug06G0179000 Rorug07G0113500 Rorug07G0271100
rosa_samantha Rh1AG087200 Rh1CG085300 Rh1DG013200 Rh1DG091700 Rh1DG091800 Rh1DG338300 Rh2AG375400 Rh2AG407000 Rh2AG513500 Rh2BG277700 Rh2BG371200 Rh2BG376100 Rh2BG580500 Rh2CG354300 Rh2DG200100 Rh2DG388000 Rh2DG393500 Rh2DG426400 Rh3CG304800 Rh4AG044600 Rh4AG220500 Rh4BG379300 Rh4CG007100 Rh4CG030300 Rh4CG038000 Rh4CG114900 Rh4CG393700 Rh5AG124900 Rh5AG342300 Rh5BG414400 Rh5CG263800 Rh5CG439000 Rh5DG231100 Rh5DG566900 Rh6AG138600 Rh6AG200000 Rh6AG253100 Rh6AG390900 Rh6AG441600 Rh6BG194700 Rh6BG225800 Rh6BG256100 Rh6CG231700 Rh6CG231900 Rh6CG312200 Rh6CG453700 Rh6DG219400 Rh7AG357700 Rh7AG442000 Rh7CG425700 Rh7CG474600 Rh7CG494100 Rh7DG253900 Rh7DG294700 Rh7DG401600 Rh7DG461300
rosa_wichuraiana Rw1G001190 Rw2G047020 Rw4G003490 Rw5G039690 Rw6G010450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1145
AccIII TCCGGA 1 cut(s) 949
AciI CCGC 3 cut(s) 665, 768, 1587
AclI AACGTT 1 cut(s) 1534
AclWI GGATC 2 cut(s) 147, 190
AcoI YGGCCR 1 cut(s) 106
AcsI RAATTY 5 cut(s) 931, 1049, 1114, 1138, 1319
AcuI CTGAAG 1 cut(s) 713
AfaI GTAC 1 cut(s) 889
AfiI CCNNNNNNNGG 3 cut(s) 500, 980, 1420
AgsI TTSAA 7 cut(s) 52, 304, 460, 1048, 1055, 1084, 1327
AjnI CCWGG 4 cut(s) 5, 198, 289, 353
AjuI GAANNNNNNNTTGG 4 cut(s) 967, 999, 1613, 1645
AluBI AGCT 9 cut(s) 434, 466, 686, 822, 845, 917, 1044, 1219, 1418
AluI AGCT 9 cut(s) 434, 466, 686, 822, 845, 917, 1044, 1219, 1418
Alw26I GTCTC 3 cut(s) 600, 898, 1211
AlwI GGATC 2 cut(s) 147, 190
AlwNI CAGNNNCTG 1 cut(s) 328
Aor13HI TCCGGA 1 cut(s) 949
AoxI GGCC 3 cut(s) 3, 106, 1482
ApeKI GCWGC 2 cut(s) 434, 437
ApoI RAATTY 5 cut(s) 931, 1049, 1114, 1138, 1319
AseI ATTAAT 1 cut(s) 798
Asp700I GAANNNNTTC 1 cut(s) 969
AspS9I GGNCC 2 cut(s) 995, 1482
AsuHPI GGTGA 3 cut(s) 236, 1201, 1403
AsuII TTCGAA 1 cut(s) 78
AvaII GGWCC 1 cut(s) 995
BaeGI GKGCMC 1 cut(s) 187
BalI TGGCCA 1 cut(s) 108
BanII GRGCYC 1 cut(s) 1360
BbsI GAAGAC 1 cut(s) 1230
BbvI GCAGC 2 cut(s) 421, 449
BccI CCATC 3 cut(s) 353, 749, 878
BciT130I CCWGG 4 cut(s) 7, 200, 291, 355
BciVI GTATCC 1 cut(s) 418
BcoDI GTCTC 3 cut(s) 600, 898, 1211
BfaI CTAG 3 cut(s) 962, 1220, 1557
BfmI CTRYAG 1 cut(s) 435
BfuAI ACCTGC 1 cut(s) 1145
BfuI GTATCC 1 cut(s) 418
BglII AGATCT 2 cut(s) 826, 1300
BisI GCNGC 3 cut(s) 435, 438, 666
BlsI GCNGC 3 cut(s) 436, 439, 667
Bme1390I CCNGG 4 cut(s) 7, 200, 291, 355
Bme18I GGWCC 1 cut(s) 995
BmgT120I GGNCC 2 cut(s) 995, 1482
BmiI GGNNCC 1 cut(s) 719
BmrFI CCNGG 4 cut(s) 7, 200, 291, 355
BmrI ACTGGG 1 cut(s) 230
BmsI GCATC 1 cut(s) 469
BmuI ACTGGG 1 cut(s) 230
BpiI GAAGAC 1 cut(s) 1230
Bpu10I CCTNAGC 1 cut(s) 1419
Bpu14I TTCGAA 1 cut(s) 78
BpuEI CTTGAG 4 cut(s) 155, 230, 1289, 1621
BsaJI CCNNGG 3 cut(s) 199, 354, 1089
BsaWI WCCGGW 1 cut(s) 949
BsaXI ACNNNNNCTCC 2 cut(s) 504, 534
Bsc4I CCNNNNNNNGG 3 cut(s) 500, 980, 1420
Bse1I ACTGG 1 cut(s) 236
Bse3DI GCAATG 3 cut(s) 583, 633, 1187
BseAI TCCGGA 1 cut(s) 949
BseBI CCWGG 4 cut(s) 7, 200, 291, 355
BseDI CCNNGG 3 cut(s) 199, 354, 1089
BseGI GGATG 4 cut(s) 94, 157, 364, 760
BseLI CCNNNNNNNGG 3 cut(s) 500, 980, 1420
BseMI GCAATG 3 cut(s) 583, 633, 1187
BseMII CTCAG 5 cut(s) 662, 837, 853, 1373, 1433
BseNI ACTGG 1 cut(s) 236
BseRI GAGGAG 2 cut(s) 25, 28
BseSI GKGCMC 1 cut(s) 187
BseXI GCAGC 2 cut(s) 421, 449
BshFI GGCC 3 cut(s) 5, 108, 1484
BsiSI CCGG 1 cut(s) 950
BslFI GGGAC 1 cut(s) 516
BslI CCNNNNNNNGG 3 cut(s) 500, 980, 1420
BsmAI GTCTC 3 cut(s) 600, 898, 1211
BsmFI GGGAC 1 cut(s) 516
BsnI GGCC 3 cut(s) 5, 108, 1484
Bsp119I TTCGAA 1 cut(s) 78
Bsp1286I GDGCHC 2 cut(s) 187, 1360
Bsp13I TCCGGA 1 cut(s) 949
Bsp143I GATC 5 cut(s) 139, 195, 826, 988, 1300
BspACI CCGC 3 cut(s) 665, 768, 1587
BspANI GGCC 3 cut(s) 5, 108, 1484
BspCNI CTCAG 5 cut(s) 661, 836, 852, 1372, 1432
BspEI TCCGGA 1 cut(s) 949
BspHI TCATGA 2 cut(s) 217, 568
BspLI GGNNCC 1 cut(s) 719
BspMAI CTGCAG 1 cut(s) 439
BspMI ACCTGC 1 cut(s) 1145
BspPI GGATC 2 cut(s) 147, 190
BspT104I TTCGAA 1 cut(s) 78
BsrDI GCAATG 3 cut(s) 583, 633, 1187
BsrI ACTGG 1 cut(s) 236
BssECI CCNNGG 3 cut(s) 199, 354, 1089
BssMI GATC 5 cut(s) 139, 195, 826, 988, 1300
BssT1I CCWWGG 1 cut(s) 1089
Bst2UI CCWGG 4 cut(s) 7, 200, 291, 355
Bst4CI ACNGT 1 cut(s) 330
Bst6I CTCTTC 2 cut(s) 544, 1355
BstBI TTCGAA 1 cut(s) 78
BstC8I GCNNGC 3 cut(s) 110, 699, 1243
BstDEI CTNAG 6 cut(s) 397, 648, 823, 839, 1359, 1419
BstEII GGTNACC 1 cut(s) 770
BstF5I GGATG 4 cut(s) 94, 157, 364, 760
BstKTI GATC 5 cut(s) 142, 198, 829, 991, 1303
BstMAI GTCTC 3 cut(s) 600, 898, 1211
BstMBI GATC 5 cut(s) 139, 195, 826, 988, 1300
BstMWI GCNNNNNNNGC 3 cut(s) 25, 1172, 1364
BstNI CCWGG 4 cut(s) 7, 200, 291, 355
BstPI GGTNACC 1 cut(s) 770
BstSCI CCNGG 4 cut(s) 5, 198, 289, 353
BstSFI CTRYAG 1 cut(s) 435
BstSLI GKGCMC 1 cut(s) 187
BstV1I GCAGC 2 cut(s) 421, 449
BstV2I GAAGAC 1 cut(s) 1230
BstX2I RGATCY 3 cut(s) 195, 826, 1300
BstXI CCANNNNNNTGG 1 cut(s) 448
BstYI RGATCY 3 cut(s) 195, 826, 1300
BsuI GTATCC 1 cut(s) 418
BsuRI GGCC 3 cut(s) 5, 108, 1484
BtsCI GGATG 4 cut(s) 94, 157, 364, 760
BveI ACCTGC 1 cut(s) 1145
Cac8I GCNNGC 3 cut(s) 110, 699, 1243
CaiI CAGNNNCTG 1 cut(s) 328
CciI TCATGA 2 cut(s) 217, 568
Cfr13I GGNCC 2 cut(s) 995, 1482
Csp6I GTAC 1 cut(s) 888
CviQI GTAC 1 cut(s) 888
DdeI CTNAG 6 cut(s) 397, 648, 823, 839, 1359, 1419
DpnI GATC 5 cut(s) 141, 197, 828, 990, 1302
DpnII GATC 5 cut(s) 139, 195, 826, 988, 1300
DraI TTTAAA 3 cut(s) 1119, 1290, 1528
EaeI YGGCCR 1 cut(s) 106
Eam1104I CTCTTC 2 cut(s) 544, 1355
EarI CTCTTC 2 cut(s) 544, 1355
Eco130I CCWWGG 1 cut(s) 1089
Eco24I GRGCYC 1 cut(s) 1360
Eco32I GATATC 1 cut(s) 955
Eco47I GGWCC 1 cut(s) 995
Eco57I CTGAAG 1 cut(s) 713
Eco91I GGTNACC 1 cut(s) 770
EcoO65I GGTNACC 1 cut(s) 770
EcoRI GAATTC 1 cut(s) 1319
EcoRII CCWGG 4 cut(s) 5, 198, 289, 353
EcoRV GATATC 1 cut(s) 955
EcoT14I CCWWGG 1 cut(s) 1089
EcoT38I GRGCYC 1 cut(s) 1360
ErhI CCWWGG 1 cut(s) 1089
FaqI GGGAC 1 cut(s) 516
Fnu4HI GCNGC 3 cut(s) 435, 438, 666
FokI GGATG 4 cut(s) 101, 164, 371, 767
FriOI GRGCYC 1 cut(s) 1360
Fsp4HI GCNGC 3 cut(s) 435, 438, 666
FspBI CTAG 3 cut(s) 962, 1220, 1557
GluI GCNGC 3 cut(s) 435, 438, 666
HaeIII GGCC 3 cut(s) 5, 108, 1484
HapII CCGG 1 cut(s) 950
HindIII AAGCTT 2 cut(s) 464, 1042
HinfI GANTC 7 cut(s) 59, 80, 304, 559, 608, 1547, 1634
HpaII CCGG 1 cut(s) 950
HphI GGTGA 3 cut(s) 236, 1201, 1403
Hpy166II GTNNAC 1 cut(s) 925
Hpy188I TCNGA 9 cut(s) 151, 651, 693, 826, 842, 988, 1014, 1362, 1492
Hpy8I GTNNAC 1 cut(s) 925
HpyAV CCTTC 5 cut(s) 58, 215, 296, 980, 1428
HpyCH4III ACNGT 1 cut(s) 330
HpyCH4IV ACGT 2 cut(s) 173, 1534
HpyCH4V TGCA 4 cut(s) 437, 626, 701, 1154
HpyF10VI GCNNNNNNNGC 3 cut(s) 25, 1172, 1364
HpyF3I CTNAG 6 cut(s) 397, 648, 823, 839, 1359, 1419
HpySE526I ACGT 2 cut(s) 173, 1534
Kpn2I TCCGGA 1 cut(s) 949
Kzo9I GATC 5 cut(s) 139, 195, 826, 988, 1300
LmnI GCTCC 3 cut(s) 723, 1185, 1558
Lsp1109I GCAGC 2 cut(s) 421, 449
LweI GCATC 1 cut(s) 469
MaeI CTAG 3 cut(s) 962, 1220, 1557
MaeII ACGT 2 cut(s) 173, 1534
MaeIII GTNAC 4 cut(s) 770, 781, 1391, 1515
MalI GATC 5 cut(s) 141, 197, 828, 990, 1302
MboI GATC 5 cut(s) 139, 195, 826, 988, 1300
MboII GAAGA 7 cut(s) 272, 531, 893, 1235, 1342, 1352, 1355
MflI RGATCY 3 cut(s) 195, 826, 1300
MhlI GDGCHC 2 cut(s) 187, 1360
MlsI TGGCCA 1 cut(s) 108
MluNI TGGCCA 1 cut(s) 108
MlyI GAGTC 3 cut(s) 602, 1541, 1628
MmeI TCCRAC 1 cut(s) 129
Mox20I TGGCCA 1 cut(s) 108
MroI TCCGGA 1 cut(s) 949
MroXI GAANNNNTTC 1 cut(s) 969
MscI TGGCCA 1 cut(s) 108
MslI CAYNNNNRTG 5 cut(s) 222, 273, 384, 567, 882
Msp20I TGGCCA 1 cut(s) 108
MspI CCGG 1 cut(s) 950
MspR9I CCNGG 4 cut(s) 7, 200, 291, 355
MvaI CCWGG 4 cut(s) 7, 200, 291, 355
MwoI GCNNNNNNNGC 3 cut(s) 25, 1172, 1364
NdeII GATC 5 cut(s) 139, 195, 826, 988, 1300
NlaIV GGNNCC 1 cut(s) 719
NmuCI GTSAC 2 cut(s) 781, 1391
NspV TTCGAA 1 cut(s) 78
PagI TCATGA 2 cut(s) 217, 568
PdmI GAANNNNTTC 1 cut(s) 969
PfeI GAWTC 4 cut(s) 59, 80, 304, 559
PfoI TCCNGGA 1 cut(s) 289
PkrI GCNGC 3 cut(s) 436, 439, 667
PleI GAGTC 3 cut(s) 602, 1541, 1628
PpsI GAGTC 3 cut(s) 602, 1541, 1628
PshBI ATTAAT 1 cut(s) 798
Psp1406I AACGTT 1 cut(s) 1534
Psp6I CCWGG 4 cut(s) 5, 198, 289, 353
PspEI GGTNACC 1 cut(s) 770
PspGI CCWGG 4 cut(s) 5, 198, 289, 353
PspN4I GGNNCC 1 cut(s) 719
PspPI GGNCC 2 cut(s) 995, 1482
PstI CTGCAG 1 cut(s) 439
PstNI CAGNNNCTG 1 cut(s) 328
PsuI RGATCY 3 cut(s) 195, 826, 1300
RsaI GTAC 1 cut(s) 889
RsaNI GTAC 1 cut(s) 888
RseI CAYNNNNRTG 5 cut(s) 222, 273, 384, 567, 882
SatI GCNGC 3 cut(s) 435, 438, 666
Sau3AI GATC 5 cut(s) 139, 195, 826, 988, 1300
Sau96I GGNCC 2 cut(s) 995, 1482
SchI GAGTC 3 cut(s) 602, 1541, 1628
ScrFI CCNGG 4 cut(s) 7, 200, 291, 355
SduI GDGCHC 2 cut(s) 187, 1360
SfaNI GCATC 1 cut(s) 469
SfcI CTRYAG 1 cut(s) 435
SfuI TTCGAA 1 cut(s) 78
SinI GGWCC 1 cut(s) 995
SmiMI CAYNNNNRTG 5 cut(s) 222, 273, 384, 567, 882
SmlI CTYRAG 4 cut(s) 134, 245, 1304, 1636
SmoI CTYRAG 4 cut(s) 134, 245, 1304, 1636
SsiI CCGC 3 cut(s) 665, 768, 1587
SspMI CTAG 3 cut(s) 962, 1220, 1557
StyD4I CCNGG 4 cut(s) 5, 198, 289, 353
StyI CCWWGG 1 cut(s) 1089
TaaI ACNGT 1 cut(s) 330
TaiI ACGT 2 cut(s) 176, 1537
TaqI TCGA 3 cut(s) 14, 62, 78
TauI GCSGC 1 cut(s) 668
TfiI GAWTC 4 cut(s) 59, 80, 304, 559
TseFI GTSAC 2 cut(s) 781, 1391
TseI GCWGC 2 cut(s) 434, 437
Tsp45I GTSAC 2 cut(s) 781, 1391
TspDTI ATGAA 9 cut(s) 13, 206, 234, 551, 572, 723, 771, 894, 1248
VpaK11BI GGWCC 1 cut(s) 995
VspI ATTAAT 1 cut(s) 798
XapI RAATTY 5 cut(s) 931, 1049, 1114, 1138, 1319
XcmI CCANNNNNNNNNTGG 1 cut(s) 748
XmnI GAANNNNTTC 1 cut(s) 969
XspI CTAG 3 cut(s) 962, 1220, 1557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.