FvH4_2g33851

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000147
Physical Location & Seq
Reverse (-)
25285265 .. 25289057
3793 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g33851.t1

Sequence Viewer

Length: 1362 bp
ATGCTGAAATTCTCATTGCTGAAGCTAAAGGACTCGAGAGCAGAACTGCAAGCTGCCATTATCCATGACAAGTTCTTTCTGGCTTTCTCTGCCTACCGCATCCATCAAGTTGAAGCTCTTCTCCTTTTAAAAAACCTAAGAGCAAGTCTCCTCTCTAGGTCTTCGTTAGGAAGGCAGACTTCCTCGACCTCAACCTTATCTCCGCCGGAGAAAGTAGGCGGTGGCCACCGTGGCCAGGTATGTAAATCTCTTCCGATTCCCACCTACTTTAGGTCTCAGAAGAGAACGAGGGCTTTACAAGATGATACTCTCATGTATGAATCTGCAGAGAATGATGGCAATGCTTTTCTACTAAGCTTGGTGATGATGATAACCTTGTCTATTGAATCTGCTGAGAAGGAAGGCTGTGCGTCAACAGTTGATGTCTTATGTATCCTAGATACTAGGTCATCTTCATCTATCTTAAAGAGGACCAGCAATTTACCTTTTGATGAATCTCATGTGGTGCTTGCAATTGGACAATCTGGTGGTATTAATCTTCTGTGGAATTCTAAGCTTGCCATTCACTTGGACAAACAAGCATGTAGATCACTGATTTTTGAACATTTAGATAGAGCAGTAGTAAATTCAAATTTCCTTAACTTCTTTCCAGATGCTAAATTGGAAAACCTCCCAATTGTTACTTTTGATCATGGCCCTATTTGTCTTACCCTGGACTCTCCTAGAAGAAATGTCCCCAAACAATTTAAGTTTGAGGCGATTTGGTTGTCTCATCCTAACTTTATCCCTCTTGTTGAGAGCATTTGGAACCAGAGATTGGAAGCTAACCCTATGCATAATTTCATTGCTATTGCAGGACAGTTTTCCAACCGTGCTAGAGCCTGGAACAAAGCTGATTTTGGCAATATGTTCAAAAGAATGGAGGACCTGAATAAAGAGAGTGAAGAAATCCAACAACAACTGATGAATTTCCTGAACTCTATTTATTTGAAACAGAAAGACTCGCACATAAGGGATAACTTATTAGACTTGTGGAAGCAGGAAGAAATTTTTTGGGCACAAAAAGCTAAGGCTAATTGGCTCAAGCTTGGAGACAAGAACACAAAGTTTTTTCAAGCTCAAGCAAATATCCGGAAAAAAGTTGATTGCATATCAAAGCTACAGGATAGCAGTGGCAACTGGACGAATGATGAGGAATCTATTGCCACCATCCTAATACAGGATTTCAAGAAAAGATTCTGCCAAGACACTACCTTAAACACAGATAACATAATGAATTTTATTTCAGTTATTGAACCTGTTATTAATGCTAACGATAACTTCTTGCTTATGCAGCAAGTTACAGATGATGAAATTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

454

Amino Acids

51.72

Weight (kDa)

7.63

Isoelectric Point (pI)

46.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000147)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10354 FvH4_1g17131 FvH4_2g11611 FvH4_2g33851 FvH4_3g32112 FvH4_3g35052 FvH4_3g44611 FvH4_4g05921 FvH4_4g06411 FvH4_4g06792 FvH4_4g10365 FvH4_4g21422 FvH4_4g22401 FvH4_4g30261 FvH4_5g08843 FvH4_5g14731 FvH4_5g24781 FvH4_5g26231 FvH4_5g31282 FvH4_6g23371 FvH4_6g38511 FvH4_7g01171 FvH4_7g03341 FvH4_7g06171 FvH4_7g32472
prunus_persica Prupe.2G036900_v2.0.a1
pyrus_communis pycom02g19900 pycom03g01520 pycom05g10510 pycom16g23820
rosa_chinensis RchiOBHm_Chr1g0316031 RchiOBHm_Chr1g0342451 RchiOBHm_Chr1g0344541 RchiOBHm_Chr1g0364721 RchiOBHm_Chr2g0133541 RchiOBHm_Chr2g0134511 RchiOBHm_Chr2g0145891 RchiOBHm_Chr2g0163241 RchiOBHm_Chr5g0027201 RchiOBHm_Chr5g0027881 RchiOBHm_Chr5g0047471 RchiOBHm_Chr7g0210901
rosa_laevigata RLG00000011116 RLG00000017964 RLG00000018128 RLG00000018387 RLG00000018829 RLG00000019353 RLG00000028973 RLG00000035870 RLG00000036629
rosa_multiflora Rmu_co8126340.1_g000001 Rmu_co8216750.1_g000001 Rmu_co8222072.1_g000001 Rmu_co8332453.1_g000001 Rmu_co8349913.1_g000001 Rmu_co8405337.1_g000001 Rmu_sc0000041.1_g000012 Rmu_sc0000166.1_g000029 Rmu_sc0000251.1_g000019 Rmu_sc0000271.1_g000028 Rmu_sc0000509.1_g000036 Rmu_sc0000543.1_g000048 Rmu_sc0000808.1_g000003 Rmu_sc0000847.1_g000040 Rmu_sc0000972.1_g000020 Rmu_sc0001260.1_g000001 Rmu_sc0001464.1_g000026 Rmu_sc0001616.1_g000003 Rmu_sc0001669.1_g000001 Rmu_sc0002005.1_g000001 Rmu_sc0002014.1_g000010 Rmu_sc0002082.1_g000033 Rmu_sc0002302.1_g000024 Rmu_sc0002531.1_g000045 Rmu_sc0003276.1_g000002 Rmu_sc0003737.1_g000007 Rmu_sc0003832.1_g000022 Rmu_sc0004080.1_g000011 Rmu_sc0004487.1_g000009 Rmu_sc0004988.1_g000018 Rmu_sc0004988.1_g000019 Rmu_sc0005254.1_g000002 Rmu_sc0005733.1_g000004 Rmu_sc0006413.1_g000006 Rmu_sc0007121.1_g000013 Rmu_sc0007869.1_g000006 Rmu_sc0008035.1_g000015 Rmu_sc0008279.1_g000017 Rmu_sc0008351.1_g000014 Rmu_sc0008957.1_g000007 Rmu_sc0009012.1_g000007 Rmu_sc0010556.1_g000009 Rmu_sc0012889.1_g000003 Rmu_sc0019808.1_g000004 Rmu_sc0028113.1_g000001 Rmu_sc0031202.1_g000001 Rmu_sc0034436.1_g000001 Rmu_sc0034445.1_g000001 Rmu_sc0040044.1_g000001 Rmu_ssc0000062.1_g000032 Rmu_ssc0000372.1_g000018
rosa_roxburghii Rroxscaffold_1G00001520 Rroxscaffold_1G00039990 Rroxscaffold_1G00046370 Rroxscaffold_2G00110140 Rroxscaffold_2G00131420 Rroxscaffold_3G00222390 Rroxscaffold_5G00336040 Rroxscaffold_5G00338000 Rroxscaffold_5G00344030 Rroxscaffold_5G00363460 Rroxscaffold_6G00402000 Rroxscaffold_7G00194940
rosa_rugosa Rorug01G0106500 Rorug01G0111300 Rorug01G0247000 Rorug02G0318100.1 Rorug02G0318200 Rorug02G0459500 Rorug03G0108100 Rorug03G0200500 Rorug03G0232500 Rorug03G0240600 Rorug04G0105300 Rorug04G0256600 Rorug06G0079300 Rorug06G0082700 Rorug06G0095600 Rorug06G0179000 Rorug07G0113500 Rorug07G0271100
rosa_samantha Rh1AG087200 Rh1CG085300 Rh1DG013200 Rh1DG091700 Rh1DG091800 Rh1DG338300 Rh2AG375400 Rh2AG407000 Rh2AG513500 Rh2BG277700 Rh2BG371200 Rh2BG376100 Rh2BG580500 Rh2CG354300 Rh2DG200100 Rh2DG388000 Rh2DG393500 Rh2DG426400 Rh3CG304800 Rh4AG044600 Rh4AG220500 Rh4BG379300 Rh4CG007100 Rh4CG030300 Rh4CG038000 Rh4CG114900 Rh4CG393700 Rh5AG124900 Rh5AG342300 Rh5BG414400 Rh5CG263800 Rh5CG439000 Rh5DG231100 Rh5DG566900 Rh6AG138600 Rh6AG200000 Rh6AG253100 Rh6AG390900 Rh6AG441600 Rh6BG194700 Rh6BG225800 Rh6BG256100 Rh6CG231700 Rh6CG231900 Rh6CG312200 Rh6CG453700 Rh6DG219400 Rh7AG357700 Rh7AG442000 Rh7CG425700 Rh7CG474600 Rh7CG494100 Rh7DG253900 Rh7DG294700 Rh7DG401600 Rh7DG461300
rosa_wichuraiana Rw1G001190 Rw2G047020 Rw4G003490 Rw5G039690 Rw6G010450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 817
AccIII TCCGGA 1 cut(s) 1131
AciI CCGC 3 cut(s) 97, 203, 219
AcoI YGGCCR 2 cut(s) 223, 232
AcsI RAATTY 8 cut(s) 8, 547, 625, 631, 967, 1047, 1276, 1353
AcuI CTGAAG 1 cut(s) 41
AfiI CCNNNNNNNGG 4 cut(s) 235, 270, 817, 1219
AgsI TTSAA 9 cut(s) 113, 386, 602, 630, 913, 991, 1115, 1228, 1295
AjnI CCWGG 3 cut(s) 234, 711, 881
AjuI GAANNNNNNNTTGG 2 cut(s) 800, 832
Alw26I GTCTC 4 cut(s) 152, 279, 774, 1086
Ama87I CYCGRG 1 cut(s) 34
Aor13HI TCCGGA 1 cut(s) 1131
AoxI GGCC 3 cut(s) 223, 232, 694
ApeKI GCWGC 2 cut(s) 53, 1333
ApoI RAATTY 8 cut(s) 8, 547, 625, 631, 967, 1047, 1276, 1353
AseI ATTAAT 2 cut(s) 534, 1305
Asp700I GAANNNNTTC 2 cut(s) 117, 1235
AspS9I GGNCC 3 cut(s) 471, 695, 925
AsuHPI GGTGA 1 cut(s) 373
AvaI CYCGRG 1 cut(s) 34
AvaII GGWCC 2 cut(s) 471, 925
BaeGI GKGCMC 1 cut(s) 1060
BalI TGGCCA 2 cut(s) 225, 234
BbsI GAAGAC 1 cut(s) 153
BbvI GCAGC 2 cut(s) 40, 1345
BccI CCATC 3 cut(s) 111, 329, 1217
BciT130I CCWGG 3 cut(s) 236, 713, 883
BciVI GTATCC 1 cut(s) 443
BclI TGATCA 1 cut(s) 688
BcoDI GTCTC 4 cut(s) 152, 279, 774, 1086
BfaI CTAG 5 cut(s) 156, 437, 444, 723, 876
BfmI CTRYAG 2 cut(s) 324, 1160
BfuI GTATCC 1 cut(s) 443
BglI GCCNNNNNGGC 1 cut(s) 231
BisI GCNGC 2 cut(s) 54, 1334
BlsI GCNGC 2 cut(s) 55, 1335
Bme1390I CCNGG 3 cut(s) 236, 713, 883
Bme18I GGWCC 2 cut(s) 471, 925
BmeT110I CYCGRG 1 cut(s) 34
BmgT120I GGNCC 3 cut(s) 471, 695, 925
BmiI GGNNCC 1 cut(s) 809
BmrFI CCNGG 3 cut(s) 236, 713, 883
BmsI GCATC 2 cut(s) 108, 643
BpiI GAAGAC 1 cut(s) 153
BplI GAGNNNNNCTC 2 cut(s) 132, 164
Bpu10I CCTNAGC 1 cut(s) 1068
BpuEI CTTGAG 2 cut(s) 1067, 1104
BsaI GGTCTC 1 cut(s) 279
BsaJI CCNNGG 2 cut(s) 229, 711
BsaWI WCCGGW 1 cut(s) 1131
BsaXI ACNNNNNCTCC 2 cut(s) 184, 214
Bsc4I CCNNNNNNNGG 4 cut(s) 235, 270, 817, 1219
Bse1I ACTGG 1 cut(s) 1184
Bse3DI GCAATG 3 cut(s) 14, 346, 843
BseAI TCCGGA 1 cut(s) 1131
BseBI CCWGG 3 cut(s) 236, 713, 883
BseDI CCNNGG 2 cut(s) 229, 711
BseGI GGATG 3 cut(s) 99, 772, 1209
BseLI CCNNNNNNNGG 4 cut(s) 235, 270, 817, 1219
BseMI GCAATG 3 cut(s) 14, 346, 843
BseMII CTCAG 2 cut(s) 290, 384
BseNI ACTGG 1 cut(s) 1184
BseRI GAGGAG 1 cut(s) 140
BseSI GKGCMC 1 cut(s) 1060
BseXI GCAGC 2 cut(s) 40, 1345
BshFI GGCC 3 cut(s) 225, 234, 696
BsiHKCI CYCGRG 1 cut(s) 34
BsiSI CCGG 2 cut(s) 206, 1132
BslFI GGGAC 1 cut(s) 719
BslI CCNNNNNNNGG 4 cut(s) 235, 270, 817, 1219
BsmAI GTCTC 4 cut(s) 152, 279, 774, 1086
BsmFI GGGAC 1 cut(s) 719
BsnI GGCC 3 cut(s) 225, 234, 696
Bso31I GGTCTC 1 cut(s) 279
BsoBI CYCGRG 1 cut(s) 34
Bsp1286I GDGCHC 1 cut(s) 1060
Bsp13I TCCGGA 1 cut(s) 1131
Bsp143I GATC 2 cut(s) 587, 688
BspACI CCGC 3 cut(s) 97, 203, 219
BspANI GGCC 3 cut(s) 225, 234, 696
BspCNI CTCAG 2 cut(s) 289, 385
BspEI TCCGGA 1 cut(s) 1131
BspLI GGNNCC 1 cut(s) 809
BspMAI CTGCAG 1 cut(s) 328
BspQI GCTCTTC 1 cut(s) 123
BspTNI GGTCTC 1 cut(s) 279
BsrDI GCAATG 3 cut(s) 14, 346, 843
BsrI ACTGG 1 cut(s) 1184
BssECI CCNNGG 2 cut(s) 229, 711
BssMI GATC 2 cut(s) 587, 688
Bst2UI CCWGG 3 cut(s) 236, 713, 883
Bst4CI ACNGT 4 cut(s) 230, 418, 861, 872
Bst6I CTCTTC 3 cut(s) 123, 255, 275
BstC8I GCNNGC 3 cut(s) 51, 510, 558
BstDEI CTNAG 6 cut(s) 137, 276, 353, 393, 552, 1068
BstDSI CCRYGG 1 cut(s) 229
BstENI CCTNNNNNAGG 2 cut(s) 268, 1217
BstF5I GGATG 3 cut(s) 99, 772, 1209
BstKTI GATC 2 cut(s) 590, 691
BstMAI GTCTC 4 cut(s) 152, 279, 774, 1086
BstMBI GATC 2 cut(s) 587, 688
BstMWI GCNNNNNNNGC 4 cut(s) 89, 231, 1064, 1333
BstNI CCWGG 3 cut(s) 236, 713, 883
BstNSI RCATGY 1 cut(s) 585
BstSCI CCNGG 3 cut(s) 234, 711, 881
BstSFI CTRYAG 2 cut(s) 324, 1160
BstSLI GKGCMC 1 cut(s) 1060
BstV1I GCAGC 2 cut(s) 40, 1345
BstV2I GAAGAC 1 cut(s) 153
BstXI CCANNNNNNTGG 1 cut(s) 568
BsuI GTATCC 1 cut(s) 443
BsuRI GGCC 3 cut(s) 225, 234, 696
BtgI CCRYGG 1 cut(s) 229
BtsCI GGATG 3 cut(s) 99, 772, 1209
BtsI GCAGTG 1 cut(s) 1177
BtsIMutI CAGTG 2 cut(s) 590, 1177
Cac8I GCNNGC 3 cut(s) 51, 510, 558
Cfr13I GGNCC 3 cut(s) 471, 695, 925
CseI GACGC 1 cut(s) 399
CviAII CATG 5 cut(s) 65, 313, 500, 582, 692
DdeI CTNAG 6 cut(s) 137, 276, 353, 393, 552, 1068
DpnI GATC 2 cut(s) 589, 690
DpnII GATC 2 cut(s) 587, 688
DraI TTTAAA 1 cut(s) 129
EaeI YGGCCR 2 cut(s) 223, 232
Eam1104I CTCTTC 3 cut(s) 123, 255, 275
EarI CTCTTC 3 cut(s) 123, 255, 275
EciI GGCGGA 1 cut(s) 192
Eco31I GGTCTC 1 cut(s) 279
Eco47I GGWCC 2 cut(s) 471, 925
Eco57I CTGAAG 1 cut(s) 41
Eco88I CYCGRG 1 cut(s) 34
EcoNI CCTNNNNNAGG 2 cut(s) 268, 1217
EcoO109I RGGNCCY 1 cut(s) 925
EcoRI GAATTC 1 cut(s) 547
EcoRII CCWGG 3 cut(s) 234, 711, 881
EcoT22I ATGCAT 1 cut(s) 837
FaeI CATG 5 cut(s) 68, 316, 503, 585, 695
FalI AAGNNNNNCTT 2 cut(s) 163, 195
FaqI GGGAC 1 cut(s) 719
FatI CATG 5 cut(s) 64, 312, 499, 581, 691
FbaI TGATCA 1 cut(s) 688
Fnu4HI GCNGC 2 cut(s) 54, 1334
FokI GGATG 3 cut(s) 86, 759, 1196
Fsp4HI GCNGC 2 cut(s) 54, 1334
FspBI CTAG 5 cut(s) 156, 437, 444, 723, 876
GluI GCNGC 2 cut(s) 54, 1334
HaeIII GGCC 3 cut(s) 225, 234, 696
HapII CCGG 2 cut(s) 206, 1132
HgaI GACGC 1 cut(s) 399
Hin1II CATG 5 cut(s) 68, 316, 503, 585, 695
HincII GTYRAC 1 cut(s) 414
HindII GTYRAC 1 cut(s) 414
HindIII AAGCTT 3 cut(s) 355, 554, 1085
HinfI GANTC 9 cut(s) 32, 256, 320, 386, 494, 716, 1001, 1196, 1236
HpaII CCGG 2 cut(s) 206, 1132
HphI GGTGA 1 cut(s) 373
Hpy166II GTNNAC 1 cut(s) 414
Hpy188I TCNGA 2 cut(s) 255, 279
Hpy188III TCNNGA 5 cut(s) 36, 650, 973, 1132, 1228
Hpy8I GTNNAC 1 cut(s) 414
HpyAV CCTTC 3 cut(s) 165, 391, 395
HpyCH4III ACNGT 4 cut(s) 230, 418, 861, 872
HpyCH4V TGCA 7 cut(s) 49, 326, 512, 835, 854, 1149, 1333
HpyF10VI GCNNNNNNNGC 4 cut(s) 89, 231, 1064, 1333
HpyF3I CTNAG 6 cut(s) 137, 276, 353, 393, 552, 1068
Hsp92II CATG 5 cut(s) 68, 316, 503, 585, 695
Kpn2I TCCGGA 1 cut(s) 1131
Ksp22I TGATCA 1 cut(s) 688
Kzo9I GATC 2 cut(s) 587, 688
LguI GCTCTTC 1 cut(s) 123
Lsp1109I GCAGC 2 cut(s) 40, 1345
LweI GCATC 2 cut(s) 108, 643
MaeI CTAG 5 cut(s) 156, 437, 444, 723, 876
MaeIII GTNAC 2 cut(s) 679, 1339
MalI GATC 2 cut(s) 589, 690
MboI GATC 2 cut(s) 587, 688
MboII GAAGA 9 cut(s) 110, 153, 242, 292, 444, 530, 738, 956, 1055
MfeI CAATTG 2 cut(s) 513, 675
MhlI GDGCHC 1 cut(s) 1060
MlsI TGGCCA 2 cut(s) 225, 234
MluNI TGGCCA 2 cut(s) 225, 234
MlyI GAGTC 3 cut(s) 26, 710, 995
MmeI TCCRAC 2 cut(s) 891, 976
Mox20I TGGCCA 2 cut(s) 225, 234
Mph1103I ATGCAT 1 cut(s) 837
MroI TCCGGA 1 cut(s) 1131
MroXI GAANNNNTTC 2 cut(s) 117, 1235
MscI TGGCCA 2 cut(s) 225, 234
MseI TTAA 7 cut(s) 128, 464, 534, 639, 747, 1256, 1305
Msp20I TGGCCA 2 cut(s) 225, 234
MspI CCGG 2 cut(s) 206, 1132
MspR9I CCNGG 3 cut(s) 236, 713, 883
MunI CAATTG 2 cut(s) 513, 675
MvaI CCWGG 3 cut(s) 236, 713, 883
MwoI GCNNNNNNNGC 4 cut(s) 89, 231, 1064, 1333
NdeII GATC 2 cut(s) 587, 688
NlaIII CATG 5 cut(s) 68, 316, 503, 585, 695
NlaIV GGNNCC 1 cut(s) 809
NsiI ATGCAT 1 cut(s) 837
NspI RCATGY 1 cut(s) 585
PaeR7I CTCGAG 1 cut(s) 34
PciSI GCTCTTC 1 cut(s) 123
PdmI GAANNNNTTC 2 cut(s) 117, 1235
PfeI GAWTC 6 cut(s) 256, 320, 386, 494, 1196, 1236
PflMI CCANNNNNTGG 1 cut(s) 817
PkrI GCNGC 2 cut(s) 55, 1335
PleI GAGTC 3 cut(s) 26, 710, 995
PpsI GAGTC 3 cut(s) 26, 710, 995
PpuMI RGGWCCY 1 cut(s) 925
PshBI ATTAAT 2 cut(s) 534, 1305
Psp5II RGGWCCY 1 cut(s) 925
Psp6I CCWGG 3 cut(s) 234, 711, 881
PspGI CCWGG 3 cut(s) 234, 711, 881
PspN4I GGNNCC 1 cut(s) 809
PspPI GGNCC 3 cut(s) 471, 695, 925
PspPPI RGGWCCY 1 cut(s) 925
PstI CTGCAG 1 cut(s) 328
SapI GCTCTTC 1 cut(s) 123
SaqAI TTAA 7 cut(s) 128, 464, 534, 639, 747, 1256, 1305
SatI GCNGC 2 cut(s) 54, 1334
Sau3AI GATC 2 cut(s) 587, 688
Sau96I GGNCC 3 cut(s) 471, 695, 925
SchI GAGTC 3 cut(s) 26, 710, 995
ScrFI CCNGG 3 cut(s) 236, 713, 883
SduI GDGCHC 1 cut(s) 1060
SfaNI GCATC 2 cut(s) 108, 643
SfcI CTRYAG 2 cut(s) 324, 1160
SfiI GGCCNNNNNGGCC 1 cut(s) 231
Sfr274I CTCGAG 1 cut(s) 34
SinI GGWCC 2 cut(s) 471, 925
SlaI CTCGAG 1 cut(s) 34
SmlI CTYRAG 3 cut(s) 34, 1082, 1119
SmoI CTYRAG 3 cut(s) 34, 1082, 1119
SsiI CCGC 3 cut(s) 97, 203, 219
SspMI CTAG 5 cut(s) 156, 437, 444, 723, 876
StyD4I CCNGG 3 cut(s) 234, 711, 881
TaaI ACNGT 4 cut(s) 230, 418, 861, 872
TaqI TCGA 2 cut(s) 35, 185
TfiI GAWTC 6 cut(s) 256, 320, 386, 494, 1196, 1236
Tru1I TTAA 7 cut(s) 128, 464, 534, 639, 747, 1256, 1305
Tru9I TTAA 7 cut(s) 128, 464, 534, 639, 747, 1256, 1305
TscAI CASTG 2 cut(s) 597, 1177
TseI GCWGC 2 cut(s) 53, 1333
TspDTI ATGAA 6 cut(s) 333, 444, 507, 832, 980, 1289
TspRI CASTG 2 cut(s) 597, 1177
Van91I CCANNNNNTGG 1 cut(s) 817
VpaK11BI GGWCC 2 cut(s) 471, 925
VspI ATTAAT 2 cut(s) 534, 1305
XagI CCTNNNNNAGG 2 cut(s) 268, 1217
XapI RAATTY 8 cut(s) 8, 547, 625, 631, 967, 1047, 1276, 1353
XceI RCATGY 1 cut(s) 585
XhoI CTCGAG 1 cut(s) 34
XmnI GAANNNNTTC 2 cut(s) 117, 1235
XspI CTAG 5 cut(s) 156, 437, 444, 723, 876
Zsp2I ATGCAT 1 cut(s) 837
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.