ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 204 |
| AcoI | YGGCCR | 1 cut(s) | 91 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 188, 193 |
| AgsI | TTSAA | 1 cut(s) | 425 |
| AhlI | ACTAGT | 1 cut(s) | 287 |
| AjnI | CCWGG | 1 cut(s) | 71 |
| AluBI | AGCT | 3 cut(s) | 7, 169, 520 |
| AluI | AGCT | 3 cut(s) | 7, 169, 520 |
| AlwI | GGATC | 1 cut(s) | 204 |
| AoxI | GGCC | 3 cut(s) | 91, 450, 489 |
| ApeKI | GCWGC | 2 cut(s) | 4, 413 |
| AspS9I | GGNCC | 4 cut(s) | 59, 162, 273, 450 |
| AvaII | GGWCC | 3 cut(s) | 59, 162, 273 |
| BauI | CACGAG | 1 cut(s) | 139 |
| BbsI | GAAGAC | 1 cut(s) | 522 |
| BbvI | GCAGC | 2 cut(s) | 16, 425 |
| BccI | CCATC | 2 cut(s) | 183, 215 |
| BceAI | ACGGC | 1 cut(s) | 106 |
| BciT130I | CCWGG | 1 cut(s) | 73 |
| BcuI | ACTAGT | 1 cut(s) | 287 |
| BfaI | CTAG | 1 cut(s) | 288 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 482 |
| BisI | GCNGC | 2 cut(s) | 5, 414 |
| BlsI | GCNGC | 2 cut(s) | 6, 415 |
| Bme1390I | CCNGG | 1 cut(s) | 73 |
| Bme18I | GGWCC | 3 cut(s) | 59, 162, 273 |
| BmgT120I | GGNCC | 4 cut(s) | 59, 162, 273, 450 |
| BmiI | GGNNCC | 3 cut(s) | 164, 243, 260 |
| BmrFI | CCNGG | 1 cut(s) | 73 |
| BmsI | GCATC | 1 cut(s) | 319 |
| BpiI | GAAGAC | 1 cut(s) | 522 |
| BsaJI | CCNNGG | 2 cut(s) | 187, 453 |
| BsaWI | WCCGGW | 1 cut(s) | 61 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 188, 193 |
| BseBI | CCWGG | 1 cut(s) | 73 |
| BseDI | CCNNGG | 2 cut(s) | 187, 453 |
| BseGI | GGATG | 2 cut(s) | 280, 354 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 188, 193 |
| BseMII | CTCAG | 1 cut(s) | 513 |
| BseXI | GCAGC | 2 cut(s) | 16, 425 |
| BseYI | CCCAGC | 1 cut(s) | 165 |
| BshFI | GGCC | 3 cut(s) | 93, 452, 491 |
| BsiSI | CCGG | 2 cut(s) | 62, 495 |
| BslFI | GGGAC | 2 cut(s) | 148, 189 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 188, 193 |
| BsmFI | GGGAC | 2 cut(s) | 148, 189 |
| BsnI | GGCC | 3 cut(s) | 93, 452, 491 |
| Bsp143I | GATC | 3 cut(s) | 43, 196, 305 |
| BspANI | GGCC | 3 cut(s) | 93, 452, 491 |
| BspCNI | CTCAG | 1 cut(s) | 512 |
| BspLI | GGNNCC | 3 cut(s) | 164, 243, 260 |
| BspPI | GGATC | 1 cut(s) | 204 |
| BspQI | GCTCTTC | 1 cut(s) | 176 |
| BssECI | CCNNGG | 2 cut(s) | 187, 453 |
| BssMI | GATC | 3 cut(s) | 43, 196, 305 |
| BssSI | CACGAG | 1 cut(s) | 139 |
| BssT1I | CCWWGG | 1 cut(s) | 187 |
| Bst2BI | CACGAG | 1 cut(s) | 139 |
| Bst2UI | CCWGG | 1 cut(s) | 73 |
| Bst4CI | ACNGT | 1 cut(s) | 457 |
| Bst6I | CTCTTC | 1 cut(s) | 176 |
| BstDEI | CTNAG | 1 cut(s) | 499 |
| BstDSI | CCRYGG | 1 cut(s) | 453 |
| BstF5I | GGATG | 2 cut(s) | 280, 354 |
| BstKTI | GATC | 3 cut(s) | 46, 199, 308 |
| BstMBI | GATC | 3 cut(s) | 43, 196, 305 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 482 |
| BstNI | CCWGG | 1 cut(s) | 73 |
| BstSCI | CCNGG | 1 cut(s) | 71 |
| BstV1I | GCAGC | 2 cut(s) | 16, 425 |
| BstV2I | GAAGAC | 1 cut(s) | 522 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 214 |
| BsuRI | GGCC | 3 cut(s) | 93, 452, 491 |
| BtgI | CCRYGG | 1 cut(s) | 453 |
| BtsCI | GGATG | 2 cut(s) | 280, 354 |
| BtsI | GCAGTG | 1 cut(s) | 28 |
| BtsIMutI | CAGTG | 1 cut(s) | 28 |
| Cfr13I | GGNCC | 4 cut(s) | 59, 162, 273, 450 |
| CpoI | CGGWCCG | 1 cut(s) | 59 |
| CsiI | ACCWGGT | 1 cut(s) | 71 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 251, 286 |
| CspI | CGGWCCG | 1 cut(s) | 59 |
| CviAII | CATG | 2 cut(s) | 95, 376 |
| DdeI | CTNAG | 1 cut(s) | 499 |
| DpnI | GATC | 3 cut(s) | 45, 198, 307 |
| DpnII | GATC | 3 cut(s) | 43, 196, 305 |
| EaeI | YGGCCR | 1 cut(s) | 91 |
| Eam1104I | CTCTTC | 1 cut(s) | 176 |
| EarI | CTCTTC | 1 cut(s) | 176 |
| Eco130I | CCWWGG | 1 cut(s) | 187 |
| Eco47I | GGWCC | 3 cut(s) | 59, 162, 273 |
| EcoRII | CCWGG | 1 cut(s) | 71 |
| EcoT14I | CCWWGG | 1 cut(s) | 187 |
| ErhI | CCWWGG | 1 cut(s) | 187 |
| FaeI | CATG | 2 cut(s) | 98, 379 |
| FaiI | YATR | 5 cut(s) | 96, 369, 377, 474, 512 |
| FaqI | GGGAC | 2 cut(s) | 148, 189 |
| FatI | CATG | 2 cut(s) | 94, 375 |
| Fnu4HI | GCNGC | 2 cut(s) | 5, 414 |
| FokI | GGATG | 2 cut(s) | 267, 361 |
| Fsp4HI | GCNGC | 2 cut(s) | 5, 414 |
| FspBI | CTAG | 1 cut(s) | 288 |
| GluI | GCNGC | 2 cut(s) | 5, 414 |
| GsaI | CCCAGC | 1 cut(s) | 169 |
| HaeIII | GGCC | 3 cut(s) | 93, 452, 491 |
| HapII | CCGG | 2 cut(s) | 62, 495 |
| Hin1II | CATG | 2 cut(s) | 98, 379 |
| HinfI | GANTC | 2 cut(s) | 323, 418 |
| HpaII | CCGG | 2 cut(s) | 62, 495 |
| Hpy166II | GTNNAC | 2 cut(s) | 69, 273 |
| Hpy188I | TCNGA | 6 cut(s) | 43, 196, 305, 328, 465, 584 |
| Hpy188III | TCNNGA | 2 cut(s) | 14, 422 |
| Hpy8I | GTNNAC | 2 cut(s) | 69, 273 |
| Hpy99I | CGWCG | 1 cut(s) | 584 |
| HpyAV | CCTTC | 1 cut(s) | 368 |
| HpyCH4III | ACNGT | 1 cut(s) | 457 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 81, 149, 371 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 482 |
| HpyF3I | CTNAG | 1 cut(s) | 499 |
| Hsp92II | CATG | 2 cut(s) | 98, 379 |
| Kzo9I | GATC | 3 cut(s) | 43, 196, 305 |
| LguI | GCTCTTC | 1 cut(s) | 176 |
| LmnI | GCTCC | 2 cut(s) | 247, 337 |
| Lsp1109I | GCAGC | 2 cut(s) | 16, 425 |
| LweI | GCATC | 1 cut(s) | 319 |
| MabI | ACCWGGT | 1 cut(s) | 71 |
| MaeI | CTAG | 1 cut(s) | 288 |
| MalI | GATC | 3 cut(s) | 45, 198, 307 |
| MboI | GATC | 3 cut(s) | 43, 196, 305 |
| MboII | GAAGA | 2 cut(s) | 163, 522 |
| MfeI | CAATTG | 1 cut(s) | 266 |
| MluCI | AATT | 4 cut(s) | 234, 266, 310, 386 |
| MlyI | GAGTC | 1 cut(s) | 317 |
| MmeI | TCCRAC | 2 cut(s) | 286, 562 |
| MnlI | CCTC | 5 cut(s) | 192, 258, 499, 502, 567 |
| MseI | TTAA | 4 cut(s) | 132, 237, 389, 480 |
| MslI | CAYNNNNRTG | 2 cut(s) | 93, 366 |
| MspI | CCGG | 2 cut(s) | 62, 495 |
| MspR9I | CCNGG | 1 cut(s) | 73 |
| MunI | CAATTG | 1 cut(s) | 266 |
| MvaI | CCWGG | 1 cut(s) | 73 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 482 |
| NdeII | GATC | 3 cut(s) | 43, 196, 305 |
| NlaIII | CATG | 2 cut(s) | 98, 379 |
| NlaIV | GGNNCC | 3 cut(s) | 164, 243, 260 |
| PciSI | GCTCTTC | 1 cut(s) | 176 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 461 |
| PfeI | GAWTC | 1 cut(s) | 418 |
| PflFI | GACNNNGTC | 1 cut(s) | 299 |
| PkrI | GCNGC | 2 cut(s) | 6, 415 |
| PleI | GAGTC | 1 cut(s) | 317 |
| PpsI | GAGTC | 1 cut(s) | 317 |
| Psp6I | CCWGG | 1 cut(s) | 71 |
| PspFI | CCCAGC | 1 cut(s) | 165 |
| PspGI | CCWGG | 1 cut(s) | 71 |
| PspN4I | GGNNCC | 3 cut(s) | 164, 243, 260 |
| PspPI | GGNCC | 4 cut(s) | 59, 162, 273, 450 |
| PsyI | GACNNNGTC | 1 cut(s) | 299 |
| RseI | CAYNNNNRTG | 2 cut(s) | 93, 366 |
| Rsr2I | CGGWCCG | 1 cut(s) | 59 |
| RsrII | CGGWCCG | 1 cut(s) | 59 |
| SapI | GCTCTTC | 1 cut(s) | 176 |
| SaqAI | TTAA | 4 cut(s) | 132, 237, 389, 480 |
| SatI | GCNGC | 2 cut(s) | 5, 414 |
| Sau3AI | GATC | 3 cut(s) | 43, 196, 305 |
| Sau96I | GGNCC | 4 cut(s) | 59, 162, 273, 450 |
| SchI | GAGTC | 1 cut(s) | 317 |
| ScrFI | CCNGG | 1 cut(s) | 73 |
| SetI | ASST | 9 cut(s) | 9, 74, 171, 250, 360, 438, 510, 522, 578 |
| SexAI | ACCWGGT | 1 cut(s) | 71 |
| SfaNI | GCATC | 1 cut(s) | 319 |
| SinI | GGWCC | 3 cut(s) | 59, 162, 273 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 93, 366 |
| SpeI | ACTAGT | 1 cut(s) | 287 |
| Sse9I | AATT | 4 cut(s) | 234, 266, 310, 386 |
| SspMI | CTAG | 1 cut(s) | 288 |
| StyD4I | CCNGG | 1 cut(s) | 71 |
| StyI | CCWWGG | 1 cut(s) | 187 |
| TaaI | ACNGT | 1 cut(s) | 457 |
| TaqI | TCGA | 1 cut(s) | 504 |
| TaqII | GACCGA | 1 cut(s) | 150 |
| TasI | AATT | 4 cut(s) | 234, 266, 310, 386 |
| TfiI | GAWTC | 1 cut(s) | 418 |
| Tru1I | TTAA | 4 cut(s) | 132, 237, 389, 480 |
| Tru9I | TTAA | 4 cut(s) | 132, 237, 389, 480 |
| TscAI | CASTG | 1 cut(s) | 35 |
| TseI | GCWGC | 2 cut(s) | 4, 413 |
| TspDTI | ATGAA | 2 cut(s) | 350, 392 |
| TspGWI | ACGGA | 1 cut(s) | 72 |
| TspRI | CASTG | 1 cut(s) | 35 |
| Tth111I | GACNNNGTC | 1 cut(s) | 299 |
| VpaK11BI | GGWCC | 3 cut(s) | 59, 162, 273 |
| XspI | CTAG | 1 cut(s) | 288 |