Rorug03G0240600

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000147
Physical Location & Seq
Reverse (-)
22483579 .. 22484769
1191 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0240600.1

Sequence Viewer

Length: 1191 bp
ATGGCGATGCGAGACAAAATTAGGGAATCGACAAAAGTTAAAAGACACTGGCCTGGAAAAGCCCCAGAGTGGGCAAATGATCGTGATACCTGCTCCTCCGACGAAGAAGGGATTACCATCTTGTACAAATCCTTCTCAACTCGTGATGATGATCCTAGACTACGTCGTTTGGCCGAGAGTAGGAGTGTAAAGAGGCGCTTCCGCCATGCCGAGATTGTTGAAACAACTGAAGAGGAGGAGGAGGAAGAAGAAGAGGACGCAGAGACTTTCGAGGAAAGAAGAAGAAGGATTAAGGAGAGGTTGCTTCGTCAGAGGGAGCAGAAACAACAAGAGGAGTTTGAGACTGATGACTACTGCTCGGAAGACGAATCCGATGAGGACTACTCAGAAGAAGAAGAAGAAGAAGAAGAGGATGAGATTGCTGGTGAAGTAGTTACAGTGAAGCCTGTATTTTTGTCCAAGTCCACAAGAGACACGATAGTTGAACGTAAGAGACTTGAGGAGGCCGAAGAGCAGGCCCTGGAAGCGAGGAGAAGGGAGCTGGAGGAGAGGAAGAAAGAGACAAAGAGAATGGTGCTCGAAGAGATTCGGAAAGACGAAGAGATTCACAAGGGTTTGATGAATCAGGATTCGGCAAATGATGATGTTGACACTGACAATGATCCTGAGGAGGATACTAAAGCAGCTTGGAAGGCAAGAGAGAGGGCCAGGCTCAAGAAGGAGAGGGCAGCAAGGGAAGCAGTCATTTTGAAGGAGATAGAGAAGATGAATGATCAAGAGAGGAGGGAGTACTGGGAGAGGAAGAATCCTGCCTCACCTCCTGCGCCACAGCCCCGAAAGAGGAAGATTAAGTTCATGCAGAGAGATCACCACAGGGGAGCTTTCTTCCGTTCGGACTCTGATGATGAAGATGGCGTTTTAGAAAGAGATTATTCGGCCCCAACCGGAGAGGATAAGATGGATAAAACAAGACTGCCCAAGGTGATGCAGGTCAAGAATTTCGGGCGTAGGGGAAGGGCTAAATGGACTCATCTTGTCAATGAGGATACTACTGATTGGGACAGCCCGTGGATGTGGAATGATCGTCAAGGGTCAAGGTATAATGTGAAAATGGCAGCCATGAATGCACCAATAGCAAGACCAAAAGGAAACAAGAGATTGAGGTTCTCTGTGGATGAAGATGAACTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

396

Amino Acids

47.42

Weight (kDa)

5.12

Isoelectric Point (pI)

73.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFAP1 PF06991 136 - 350 2.7e-51 Microfibril-associated/Pre-mRNA processing
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000147)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10354 FvH4_1g17131 FvH4_2g11611 FvH4_2g33851 FvH4_3g32112 FvH4_3g35052 FvH4_3g44611 FvH4_4g05921 FvH4_4g06411 FvH4_4g06792 FvH4_4g10365 FvH4_4g21422 FvH4_4g22401 FvH4_4g30261 FvH4_5g08843 FvH4_5g14731 FvH4_5g24781 FvH4_5g26231 FvH4_5g31282 FvH4_6g23371 FvH4_6g38511 FvH4_7g01171 FvH4_7g03341 FvH4_7g06171 FvH4_7g32472
prunus_persica Prupe.2G036900_v2.0.a1
pyrus_communis pycom02g19900 pycom03g01520 pycom05g10510 pycom16g23820
rosa_chinensis RchiOBHm_Chr1g0316031 RchiOBHm_Chr1g0342451 RchiOBHm_Chr1g0344541 RchiOBHm_Chr1g0364721 RchiOBHm_Chr2g0133541 RchiOBHm_Chr2g0134511 RchiOBHm_Chr2g0145891 RchiOBHm_Chr2g0163241 RchiOBHm_Chr5g0027201 RchiOBHm_Chr5g0027881 RchiOBHm_Chr5g0047471 RchiOBHm_Chr7g0210901
rosa_laevigata RLG00000011116 RLG00000017964 RLG00000018128 RLG00000018387 RLG00000018829 RLG00000019353 RLG00000028973 RLG00000035870 RLG00000036629
rosa_multiflora Rmu_co8126340.1_g000001 Rmu_co8216750.1_g000001 Rmu_co8222072.1_g000001 Rmu_co8332453.1_g000001 Rmu_co8349913.1_g000001 Rmu_co8405337.1_g000001 Rmu_sc0000041.1_g000012 Rmu_sc0000166.1_g000029 Rmu_sc0000251.1_g000019 Rmu_sc0000271.1_g000028 Rmu_sc0000509.1_g000036 Rmu_sc0000543.1_g000048 Rmu_sc0000808.1_g000003 Rmu_sc0000847.1_g000040 Rmu_sc0000972.1_g000020 Rmu_sc0001260.1_g000001 Rmu_sc0001464.1_g000026 Rmu_sc0001616.1_g000003 Rmu_sc0001669.1_g000001 Rmu_sc0002005.1_g000001 Rmu_sc0002014.1_g000010 Rmu_sc0002082.1_g000033 Rmu_sc0002302.1_g000024 Rmu_sc0002531.1_g000045 Rmu_sc0003276.1_g000002 Rmu_sc0003737.1_g000007 Rmu_sc0003832.1_g000022 Rmu_sc0004080.1_g000011 Rmu_sc0004487.1_g000009 Rmu_sc0004988.1_g000018 Rmu_sc0004988.1_g000019 Rmu_sc0005254.1_g000002 Rmu_sc0005733.1_g000004 Rmu_sc0006413.1_g000006 Rmu_sc0007121.1_g000013 Rmu_sc0007869.1_g000006 Rmu_sc0008035.1_g000015 Rmu_sc0008279.1_g000017 Rmu_sc0008351.1_g000014 Rmu_sc0008957.1_g000007 Rmu_sc0009012.1_g000007 Rmu_sc0010556.1_g000009 Rmu_sc0012889.1_g000003 Rmu_sc0019808.1_g000004 Rmu_sc0028113.1_g000001 Rmu_sc0031202.1_g000001 Rmu_sc0034436.1_g000001 Rmu_sc0034445.1_g000001 Rmu_sc0040044.1_g000001 Rmu_ssc0000062.1_g000032 Rmu_ssc0000372.1_g000018
rosa_roxburghii Rroxscaffold_1G00001520 Rroxscaffold_1G00039990 Rroxscaffold_1G00046370 Rroxscaffold_2G00110140 Rroxscaffold_2G00131420 Rroxscaffold_3G00222390 Rroxscaffold_5G00336040 Rroxscaffold_5G00338000 Rroxscaffold_5G00344030 Rroxscaffold_5G00363460 Rroxscaffold_6G00402000 Rroxscaffold_7G00194940
rosa_rugosa Rorug01G0106500 Rorug01G0111300 Rorug01G0247000 Rorug02G0318100.1 Rorug02G0318200 Rorug02G0459500 Rorug03G0108100 Rorug03G0200500 Rorug03G0232500 Rorug03G0240600 Rorug04G0105300 Rorug04G0256600 Rorug06G0079300 Rorug06G0082700 Rorug06G0095600 Rorug06G0179000 Rorug07G0113500 Rorug07G0271100
rosa_samantha Rh1AG087200 Rh1CG085300 Rh1DG013200 Rh1DG091700 Rh1DG091800 Rh1DG338300 Rh2AG375400 Rh2AG407000 Rh2AG513500 Rh2BG277700 Rh2BG371200 Rh2BG376100 Rh2BG580500 Rh2CG354300 Rh2DG200100 Rh2DG388000 Rh2DG393500 Rh2DG426400 Rh3CG304800 Rh4AG044600 Rh4AG220500 Rh4BG379300 Rh4CG007100 Rh4CG030300 Rh4CG038000 Rh4CG114900 Rh4CG393700 Rh5AG124900 Rh5AG342300 Rh5BG414400 Rh5CG263800 Rh5CG439000 Rh5DG231100 Rh5DG566900 Rh6AG138600 Rh6AG200000 Rh6AG253100 Rh6AG390900 Rh6AG441600 Rh6BG194700 Rh6BG225800 Rh6BG256100 Rh6CG231700 Rh6CG231900 Rh6CG312200 Rh6CG453700 Rh6DG219400 Rh7AG357700 Rh7AG442000 Rh7CG425700 Rh7CG474600 Rh7CG494100 Rh7DG253900 Rh7DG294700 Rh7DG401600 Rh7DG461300
rosa_wichuraiana Rw1G001190 Rw2G047020 Rw4G003490 Rw5G039690 Rw6G010450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 98, 979
AciI CCGC 1 cut(s) 202
AclWI GGATC 2 cut(s) 146, 656
AcoI YGGCCR 1 cut(s) 171
AcsI RAATTY 1 cut(s) 997
AcuI CTGAAG 1 cut(s) 249
AfaI GTAC 2 cut(s) 125, 791
AfiI CCNNNNNNNGG 4 cut(s) 69, 70, 180, 840
AgsI TTSAA 3 cut(s) 221, 485, 751
AjnI CCWGG 3 cut(s) 52, 519, 707
AluBI AGCT 3 cut(s) 541, 686, 881
AluI AGCT 3 cut(s) 541, 686, 881
Alw21I GWGCWC 1 cut(s) 579
Alw26I GTCTC 6 cut(s) 6, 257, 335, 465, 487, 554
AlwI GGATC 2 cut(s) 146, 656
AlwNI CAGNNNCTG 1 cut(s) 520
AoxI GGCC 6 cut(s) 50, 171, 504, 516, 705, 936
ApeKI GCWGC 3 cut(s) 683, 728, 1115
ApoI RAATTY 1 cut(s) 997
Asp700I GAANNNNTTC 2 cut(s) 585, 603
AspLEI GCGC 2 cut(s) 198, 826
AspS9I GGNCC 3 cut(s) 517, 705, 937
AsuHPI GGTGA 4 cut(s) 437, 807, 860, 994
AxyI CCTNAGG 1 cut(s) 666
BarI GAAGNNNNNNTAC 2 cut(s) 116, 148
BauI CACGAG 1 cut(s) 141
BbsI GAAGAC 1 cut(s) 369
Bbv12I GWGCWC 1 cut(s) 579
BbvI GCAGC 3 cut(s) 695, 740, 1127
BccI CCATC 3 cut(s) 125, 905, 952
BciT130I CCWGG 3 cut(s) 54, 521, 709
BciVI GTATCC 2 cut(s) 667, 1039
BclI TGATCA 1 cut(s) 772
BcoDI GTCTC 6 cut(s) 6, 257, 335, 465, 487, 554
BfaI CTAG 1 cut(s) 156
BfoI RGCGCY 1 cut(s) 199
BfuAI ACCTGC 2 cut(s) 98, 979
BfuI GTATCC 2 cut(s) 667, 1039
BisI GCNGC 3 cut(s) 684, 729, 1116
BlsI GCNGC 3 cut(s) 685, 730, 1117
BmcAI AGTACT 1 cut(s) 791
Bme1390I CCNGG 3 cut(s) 54, 521, 709
BmgT120I GGNCC 3 cut(s) 517, 705, 937
BmiI GGNNCC 1 cut(s) 939
BmrFI CCNGG 3 cut(s) 54, 521, 709
BmrI ACTGGG 1 cut(s) 802
BmsI GCATC 1 cut(s) 975
BmuI ACTGGG 1 cut(s) 802
BpiI GAAGAC 1 cut(s) 369
BplI GAGNNNNNCTC 2 cut(s) 368, 400
BpmI CTGGAG 1 cut(s) 563
BpuEI CTTGAG 2 cut(s) 518, 698
BsaBI GATNNNNATC 2 cut(s) 116, 150
BsaJI CCNNGG 3 cut(s) 519, 978, 1067
BsaWI WCCGGW 1 cut(s) 944
Bsc4I CCNNNNNNNGG 4 cut(s) 69, 70, 180, 840
Bse1I ACTGG 2 cut(s) 53, 797
Bse21I CCTNAGG 1 cut(s) 666
Bse8I GATNNNNATC 2 cut(s) 116, 150
BseBI CCWGG 3 cut(s) 54, 521, 709
BseDI CCNNGG 3 cut(s) 519, 978, 1067
BseGI GGATG 3 cut(s) 418, 1077, 1180
BseJI GATNNNNATC 2 cut(s) 116, 150
BseLI CCNNNNNNNGG 4 cut(s) 69, 70, 180, 840
BseMII CTCAG 2 cut(s) 399, 657
BseNI ACTGG 2 cut(s) 53, 797
BseXI GCAGC 3 cut(s) 695, 740, 1127
BshFI GGCC 6 cut(s) 52, 173, 506, 518, 707, 938
BsiHKAI GWGCWC 1 cut(s) 579
BsiSI CCGG 1 cut(s) 945
BslFI GGGAC 1 cut(s) 1073
BslI CCNNNNNNNGG 4 cut(s) 69, 70, 180, 840
BsmAI GTCTC 6 cut(s) 6, 257, 335, 465, 487, 554
BsmFI GGGAC 1 cut(s) 1073
BsmI GAATGC 1 cut(s) 1129
BsnI GGCC 6 cut(s) 52, 173, 506, 518, 707, 938
Bsp1286I GDGCHC 1 cut(s) 579
Bsp1407I TGTACA 1 cut(s) 123
Bsp143I GATC 6 cut(s) 79, 151, 661, 772, 865, 1081
BspACI CCGC 1 cut(s) 202
BspANI GGCC 6 cut(s) 52, 173, 506, 518, 707, 938
BspCNI CTCAG 2 cut(s) 398, 658
BspLI GGNNCC 1 cut(s) 939
BspMI ACCTGC 2 cut(s) 98, 979
BspPI GGATC 2 cut(s) 146, 656
BspQI GCTCTTC 1 cut(s) 504
BsrGI TGTACA 1 cut(s) 123
BsrI ACTGG 2 cut(s) 53, 797
BssECI CCNNGG 3 cut(s) 519, 978, 1067
BssMI GATC 6 cut(s) 79, 151, 661, 772, 865, 1081
BssSI CACGAG 1 cut(s) 141
BssT1I CCWWGG 1 cut(s) 978
Bst2BI CACGAG 1 cut(s) 141
Bst2UI CCWGG 3 cut(s) 54, 521, 709
Bst4CI ACNGT 1 cut(s) 439
Bst6I CTCTTC 6 cut(s) 225, 246, 402, 504, 576, 594
BstAUI TGTACA 1 cut(s) 123
BstC8I GCNNGC 1 cut(s) 516
BstDEI CTNAG 2 cut(s) 385, 666
BstDSI CCRYGG 1 cut(s) 1067
BstF5I GGATG 3 cut(s) 418, 1077, 1180
BstH2I RGCGCY 1 cut(s) 199
BstHHI GCGC 2 cut(s) 198, 826
BstKTI GATC 6 cut(s) 82, 154, 664, 775, 868, 1084
BstMAI GTCTC 6 cut(s) 6, 257, 335, 465, 487, 554
BstMBI GATC 6 cut(s) 79, 151, 661, 772, 865, 1081
BstMWI GCNNNNNNNGC 5 cut(s) 524, 692, 737, 1124, 1133
BstNI CCWGG 3 cut(s) 54, 521, 709
BstSCI CCNGG 3 cut(s) 52, 519, 707
BstV1I GCAGC 3 cut(s) 695, 740, 1127
BstV2I GAAGAC 1 cut(s) 369
Bsu36I CCTNAGG 1 cut(s) 666
BsuI GTATCC 2 cut(s) 667, 1039
BsuRI GGCC 6 cut(s) 52, 173, 506, 518, 707, 938
BtgI CCRYGG 1 cut(s) 1067
BtgZI GCGATG 1 cut(s) 20
BtsCI GGATG 3 cut(s) 418, 1077, 1180
BtsIMutI CAGTG 3 cut(s) 46, 444, 651
BveI ACCTGC 2 cut(s) 98, 979
Cac8I GCNNGC 1 cut(s) 516
CaiI CAGNNNCTG 1 cut(s) 520
CfoI GCGC 2 cut(s) 198, 826
Cfr13I GGNCC 3 cut(s) 517, 705, 937
CseI GACGC 1 cut(s) 266
Csp6I GTAC 2 cut(s) 124, 790
CviAII CATG 3 cut(s) 206, 856, 1120
CviQI GTAC 2 cut(s) 124, 790
DdeI CTNAG 2 cut(s) 385, 666
DpnI GATC 6 cut(s) 81, 153, 663, 774, 867, 1083
DpnII GATC 6 cut(s) 79, 151, 661, 772, 865, 1081
EaeI YGGCCR 1 cut(s) 171
Eam1104I CTCTTC 6 cut(s) 225, 246, 402, 504, 576, 594
EarI CTCTTC 6 cut(s) 225, 246, 402, 504, 576, 594
EciI GGCGGA 1 cut(s) 191
Eco130I CCWWGG 1 cut(s) 978
Eco57I CTGAAG 1 cut(s) 249
Eco81I CCTNAGG 1 cut(s) 666
EcoO109I RGGNCCY 1 cut(s) 517
EcoRII CCWGG 3 cut(s) 52, 519, 707
EcoT14I CCWWGG 1 cut(s) 978
ErhI CCWWGG 1 cut(s) 978
FaeI CATG 3 cut(s) 209, 859, 1123
FaiI YATR 4 cut(s) 207, 857, 1101, 1121
FalI AAGNNNNNCTT 3 cut(s) 182, 214, 1170
FaqI GGGAC 1 cut(s) 1073
FatI CATG 3 cut(s) 205, 855, 1119
FbaI TGATCA 1 cut(s) 772
Fnu4HI GCNGC 3 cut(s) 684, 729, 1116
FokI GGATG 3 cut(s) 425, 1084, 1187
Fsp4HI GCNGC 3 cut(s) 684, 729, 1116
FspBI CTAG 1 cut(s) 156
GlaI GCGC 2 cut(s) 197, 825
GluI GCNGC 3 cut(s) 684, 729, 1116
GsuI CTGGAG 1 cut(s) 563
HaeII RGCGCY 1 cut(s) 199
HaeIII GGCC 6 cut(s) 52, 173, 506, 518, 707, 938
HapII CCGG 1 cut(s) 945
HgaI GACGC 1 cut(s) 266
HhaI GCGC 2 cut(s) 198, 826
Hin1II CATG 3 cut(s) 209, 859, 1123
Hin6I GCGC 2 cut(s) 196, 824
HinP1I GCGC 2 cut(s) 196, 824
HincII GTYRAC 1 cut(s) 649
HindII GTYRAC 1 cut(s) 649
HinfI GANTC 9 cut(s) 26, 368, 586, 604, 622, 629, 805, 896, 1027
HpaII CCGG 1 cut(s) 945
HphI GGTGA 4 cut(s) 437, 807, 860, 994
Hpy166II GTNNAC 2 cut(s) 465, 649
Hpy188I TCNGA 8 cut(s) 100, 312, 361, 373, 388, 591, 895, 901
Hpy188III TCNNGA 7 cut(s) 83, 143, 626, 665, 715, 776, 994
Hpy8I GTNNAC 2 cut(s) 465, 649
Hpy99I CGWCG 2 cut(s) 104, 168
HpyAV CCTTC 8 cut(s) 101, 142, 279, 528, 685, 712, 745, 1008
HpyCH4III ACNGT 1 cut(s) 439
HpyCH4IV ACGT 2 cut(s) 163, 487
HpyCH4V TGCA 3 cut(s) 859, 988, 1127
HpyF10VI GCNNNNNNNGC 5 cut(s) 524, 692, 737, 1124, 1133
HpyF3I CTNAG 2 cut(s) 385, 666
HpySE526I ACGT 2 cut(s) 163, 487
Hsp92II CATG 3 cut(s) 209, 859, 1123
HspAI GCGC 2 cut(s) 196, 824
Ksp22I TGATCA 1 cut(s) 772
Kzo9I GATC 6 cut(s) 79, 151, 661, 772, 865, 1081
LguI GCTCTTC 1 cut(s) 504
LmnI GCTCC 4 cut(s) 98, 316, 538, 878
Lsp1109I GCAGC 3 cut(s) 695, 740, 1127
LweI GCATC 1 cut(s) 975
MaeI CTAG 1 cut(s) 156
MaeII ACGT 2 cut(s) 163, 487
MaeIII GTNAC 1 cut(s) 433
MalI GATC 6 cut(s) 81, 153, 663, 774, 867, 1083
MboI GATC 6 cut(s) 79, 151, 661, 772, 865, 1081
MhlI GDGCHC 1 cut(s) 579
MluCI AATT 2 cut(s) 18, 997
MlyI GAGTC 2 cut(s) 890, 1021
MmeI TCCRAC 1 cut(s) 123
MroXI GAANNNNTTC 2 cut(s) 585, 603
MseI TTAA 4 cut(s) 39, 291, 849, 1189
MspI CCGG 1 cut(s) 945
MspR9I CCNGG 3 cut(s) 54, 521, 709
Mva1269I GAATGC 1 cut(s) 1129
MvaI CCWGG 3 cut(s) 54, 521, 709
MwoI GCNNNNNNNGC 5 cut(s) 524, 692, 737, 1124, 1133
NdeII GATC 6 cut(s) 79, 151, 661, 772, 865, 1081
NlaIII CATG 3 cut(s) 209, 859, 1123
NlaIV GGNNCC 1 cut(s) 939
NmeAIII GCCGAG 2 cut(s) 199, 235
PciSI GCTCTTC 1 cut(s) 504
PctI GAATGC 1 cut(s) 1129
PdmI GAANNNNTTC 2 cut(s) 585, 603
PfeI GAWTC 7 cut(s) 26, 368, 586, 604, 622, 629, 805
PflFI GACNNNGTC 1 cut(s) 162
PkrI GCNGC 3 cut(s) 685, 730, 1117
PleI GAGTC 2 cut(s) 890, 1021
PpsI GAGTC 2 cut(s) 890, 1021
Psp6I CCWGG 3 cut(s) 52, 519, 707
PspGI CCWGG 3 cut(s) 52, 519, 707
PspN4I GGNNCC 1 cut(s) 939
PspPI GGNCC 3 cut(s) 517, 705, 937
PstNI CAGNNNCTG 1 cut(s) 520
PsyI GACNNNGTC 1 cut(s) 162
RsaI GTAC 2 cut(s) 125, 791
RsaNI GTAC 2 cut(s) 124, 790
SapI GCTCTTC 1 cut(s) 504
SaqAI TTAA 4 cut(s) 39, 291, 849, 1189
SatI GCNGC 3 cut(s) 684, 729, 1116
Sau3AI GATC 6 cut(s) 79, 151, 661, 772, 865, 1081
Sau96I GGNCC 3 cut(s) 517, 705, 937
ScaI AGTACT 1 cut(s) 791
SchI GAGTC 2 cut(s) 890, 1021
ScrFI CCNGG 3 cut(s) 54, 521, 709
SduI GDGCHC 1 cut(s) 579
SfaNI GCATC 1 cut(s) 975
SmlI CTYRAG 2 cut(s) 497, 713
SmoI CTYRAG 2 cut(s) 497, 713
Sse9I AATT 2 cut(s) 18, 997
SsiI CCGC 1 cut(s) 202
SspMI CTAG 1 cut(s) 156
StyD4I CCNGG 3 cut(s) 52, 519, 707
StyI CCWWGG 1 cut(s) 978
TaaI ACNGT 1 cut(s) 439
TaiI ACGT 2 cut(s) 166, 490
TaqI TCGA 3 cut(s) 29, 270, 579
TasI AATT 2 cut(s) 18, 997
TatI WGTACW 2 cut(s) 123, 789
TfiI GAWTC 7 cut(s) 26, 368, 586, 604, 622, 629, 805
Tru1I TTAA 4 cut(s) 39, 291, 849, 1189
Tru9I TTAA 4 cut(s) 39, 291, 849, 1189
TscAI CASTG 3 cut(s) 53, 444, 658
TseI GCWGC 3 cut(s) 683, 728, 1115
TspDTI ATGAA 6 cut(s) 635, 782, 844, 921, 1136, 1191
TspGWI ACGGA 1 cut(s) 878
TspRI CASTG 3 cut(s) 53, 444, 658
Tth111I GACNNNGTC 1 cut(s) 162
XapI RAATTY 1 cut(s) 997
XmnI GAANNNNTTC 2 cut(s) 585, 603
XspI CTAG 1 cut(s) 156
ZrmI AGTACT 1 cut(s) 791
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.