FvH4_2g11611

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000147
Physical Location & Seq
Forward (+)
10145224 .. 10147469
2246 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g11611.t1

Sequence Viewer

Length: 1605 bp
ATGGCGACCACCATGGCCGGGTTTTCGGGGTTTCAAGCTCCTCTTTTTCTAGGGTTCTCACAATCAGCGATCAGGGAGAGTTTGTTCGGGAGGAAAGTCTGCGTTCAATCCGGTCGAGATGCGGGTCGGAAGTTTGTTCGGATAAGGCGTGGCTTCACATCAATGGGAATCAATAGCAAGCTCGATTCTACCTATGATCGGAGTCTTGTTCCTGCTCTGCCAAATCTTGATATGCCTAAGGTAACATTGGACCAGAACCTTCCTTTTGATAAATCTTATGGTATTGCAGCCTCAGGGCAATGTGGTGGTTTGACAGTTCATTGGAAATCAAAGAAAGATAGGCAGGCTGCTTTTTGGAGTGTTGTGGCTCAATTACAACCTGCAAACCAGGAAGGTTGGGTCCTTATCGGTGACTTTAATGCCATTACTACTCTTGATGAAAAGCTTGGTGGAAACCAAGCAACTGGCTTGCCTTACACTTGGACAAATAAACATGAGGATGACACTCTTATGTTTGAAAGGCTTGATAGAGCCTGTGTCAATGCAAGCTTGCTCAATGAATGTCCCGATCTGAGTCTAGATAATCTTCCAATCATAGGCTCAGATCATGGACCTATTTGTCTTACCCTAAATGTTGCTAGAAAGGAAATTGTTCAAAGTTTTAAATTCGAAGCAGTTTGGTTATCTCACAAAGATTTCAAGCCCTTGGTGGATCATTTTTGGAAACAGAACTTAAATGCTAACCCTCTCTTGAATTTTGTTACAATTGCAGGGCAGTTTGCTAACCAAGCCAAGGCTTGGAAAAAGAATGTTTTTGGAAACCTTTTCAGGAAGCTTGAAGACTTGCATGAAAGAAGTATTTGTATACAACAACAGTTGATGCTCTCTCCCTTTTCTCCCTATGTAAGGGTGCAGGACTTGAGGATTCGAGATGACCTCACAAAGCTTTACAGAGAAGAAGAACTCTTCTGGGCTCAAAGAGCAAAGGCTAATTGGCTCAATTTAGGTGACAGGAACACAAGATTTTTCCAAACACAGGCCAATATTAGAAAGAAATCAAATCATATTTCCAAAATCAAGGACAATGCAGGCAACTGGACCACTTCTGAACAGGATATTGCAGATGTTTTAATCCAGGATTTCAAAAAACGTTTCCACATGGATAATGCTCCTAACTATAATTCTTTACATGATTTCTTATCTGTTGTAGATCCTTGTATTGATGATGCTGATAATGATCTACTTTTAAAACAGATTACAGATGATGAAGTTTGGGAAGCAGTCAATGCTATTGGCGCCCTCAAAGCCCTGGGACCAGACGGTTTGCATGCATCCTTCTATCAGAATTGTTGGATGGAAATAAAAGACACGGTTATTCCCATGATCAAAGGTATCTTTAATGATAGTACCACTTTAAATCTCATTAATCACACTAATATTGCTTTGATCCCTAAGGTTGATGAACCCTCTAAAGGTGCCTTTGCACCAGGAAGGGCCATTCGGGACAATATTCTCATTGCACATGAATTATTCTCTGACTTTCAGAGGAAGAAAGGGAGAGTGGGAGCCTTTGCTCTTAAACTTGATCTAGAAAATTGTAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

535

Amino Acids

60.34

Weight (kDa)

7.99

Isoelectric Point (pI)

28.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000147)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10354 FvH4_1g17131 FvH4_2g11611 FvH4_2g33851 FvH4_3g32112 FvH4_3g35052 FvH4_3g44611 FvH4_4g05921 FvH4_4g06411 FvH4_4g06792 FvH4_4g10365 FvH4_4g21422 FvH4_4g22401 FvH4_4g30261 FvH4_5g08843 FvH4_5g14731 FvH4_5g24781 FvH4_5g26231 FvH4_5g31282 FvH4_6g23371 FvH4_6g38511 FvH4_7g01171 FvH4_7g03341 FvH4_7g06171 FvH4_7g32472
prunus_persica Prupe.2G036900_v2.0.a1
pyrus_communis pycom02g19900 pycom03g01520 pycom05g10510 pycom16g23820
rosa_chinensis RchiOBHm_Chr1g0316031 RchiOBHm_Chr1g0342451 RchiOBHm_Chr1g0344541 RchiOBHm_Chr1g0364721 RchiOBHm_Chr2g0133541 RchiOBHm_Chr2g0134511 RchiOBHm_Chr2g0145891 RchiOBHm_Chr2g0163241 RchiOBHm_Chr5g0027201 RchiOBHm_Chr5g0027881 RchiOBHm_Chr5g0047471 RchiOBHm_Chr7g0210901
rosa_laevigata RLG00000011116 RLG00000017964 RLG00000018128 RLG00000018387 RLG00000018829 RLG00000019353 RLG00000028973 RLG00000035870 RLG00000036629
rosa_multiflora Rmu_co8126340.1_g000001 Rmu_co8216750.1_g000001 Rmu_co8222072.1_g000001 Rmu_co8332453.1_g000001 Rmu_co8349913.1_g000001 Rmu_co8405337.1_g000001 Rmu_sc0000041.1_g000012 Rmu_sc0000166.1_g000029 Rmu_sc0000251.1_g000019 Rmu_sc0000271.1_g000028 Rmu_sc0000509.1_g000036 Rmu_sc0000543.1_g000048 Rmu_sc0000808.1_g000003 Rmu_sc0000847.1_g000040 Rmu_sc0000972.1_g000020 Rmu_sc0001260.1_g000001 Rmu_sc0001464.1_g000026 Rmu_sc0001616.1_g000003 Rmu_sc0001669.1_g000001 Rmu_sc0002005.1_g000001 Rmu_sc0002014.1_g000010 Rmu_sc0002082.1_g000033 Rmu_sc0002302.1_g000024 Rmu_sc0002531.1_g000045 Rmu_sc0003276.1_g000002 Rmu_sc0003737.1_g000007 Rmu_sc0003832.1_g000022 Rmu_sc0004080.1_g000011 Rmu_sc0004487.1_g000009 Rmu_sc0004988.1_g000018 Rmu_sc0004988.1_g000019 Rmu_sc0005254.1_g000002 Rmu_sc0005733.1_g000004 Rmu_sc0006413.1_g000006 Rmu_sc0007121.1_g000013 Rmu_sc0007869.1_g000006 Rmu_sc0008035.1_g000015 Rmu_sc0008279.1_g000017 Rmu_sc0008351.1_g000014 Rmu_sc0008957.1_g000007 Rmu_sc0009012.1_g000007 Rmu_sc0010556.1_g000009 Rmu_sc0012889.1_g000003 Rmu_sc0019808.1_g000004 Rmu_sc0028113.1_g000001 Rmu_sc0031202.1_g000001 Rmu_sc0034436.1_g000001 Rmu_sc0034445.1_g000001 Rmu_sc0040044.1_g000001 Rmu_ssc0000062.1_g000032 Rmu_ssc0000372.1_g000018
rosa_roxburghii Rroxscaffold_1G00001520 Rroxscaffold_1G00039990 Rroxscaffold_1G00046370 Rroxscaffold_2G00110140 Rroxscaffold_2G00131420 Rroxscaffold_3G00222390 Rroxscaffold_5G00336040 Rroxscaffold_5G00338000 Rroxscaffold_5G00344030 Rroxscaffold_5G00363460 Rroxscaffold_6G00402000 Rroxscaffold_7G00194940
rosa_rugosa Rorug01G0106500 Rorug01G0111300 Rorug01G0247000 Rorug02G0318100.1 Rorug02G0318200 Rorug02G0459500 Rorug03G0108100 Rorug03G0200500 Rorug03G0232500 Rorug03G0240600 Rorug04G0105300 Rorug04G0256600 Rorug06G0079300 Rorug06G0082700 Rorug06G0095600 Rorug06G0179000 Rorug07G0113500 Rorug07G0271100
rosa_samantha Rh1AG087200 Rh1CG085300 Rh1DG013200 Rh1DG091700 Rh1DG091800 Rh1DG338300 Rh2AG375400 Rh2AG407000 Rh2AG513500 Rh2BG277700 Rh2BG371200 Rh2BG376100 Rh2BG580500 Rh2CG354300 Rh2DG200100 Rh2DG388000 Rh2DG393500 Rh2DG426400 Rh3CG304800 Rh4AG044600 Rh4AG220500 Rh4BG379300 Rh4CG007100 Rh4CG030300 Rh4CG038000 Rh4CG114900 Rh4CG393700 Rh5AG124900 Rh5AG342300 Rh5BG414400 Rh5CG263800 Rh5CG439000 Rh5DG231100 Rh5DG566900 Rh6AG138600 Rh6AG200000 Rh6AG253100 Rh6AG390900 Rh6AG441600 Rh6BG194700 Rh6BG225800 Rh6BG256100 Rh6CG231700 Rh6CG231900 Rh6CG312200 Rh6CG453700 Rh6DG219400 Rh7AG357700 Rh7AG442000 Rh7CG425700 Rh7CG474600 Rh7CG494100 Rh7DG253900 Rh7DG294700 Rh7DG401600 Rh7DG461300
rosa_wichuraiana Rw1G001190 Rw2G047020 Rw4G003490 Rw5G039690 Rw6G010450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 618
Acc36I ACCTGC 1 cut(s) 388
AccB1I GGYRCC 2 cut(s) 1295, 1475
AccB7I CCANNNNNTGG 1 cut(s) 798
AccI GTMKAC 1 cut(s) 865
AciI CCGC 1 cut(s) 122
AclI AACGTT 1 cut(s) 1150
AclWI GGATC 3 cut(s) 720, 1205, 1441
AcoI YGGCCR 1 cut(s) 15
AcsI RAATTY 2 cut(s) 665, 754
AcyI GRCGYC 1 cut(s) 1296
AfaI GTAC 1 cut(s) 1408
AfiI CCNNNNNNNGG 8 cut(s) 18, 198, 596, 793, 798, 906, 1036, 1472
AgsI TTSAA 8 cut(s) 35, 107, 518, 656, 700, 754, 839, 1144
AjnI CCWGG 4 cut(s) 387, 1134, 1308, 1486
AloI GAACNNNNNNTCC 2 cut(s) 68, 100
AluBI AGCT 6 cut(s) 38, 181, 445, 549, 835, 946
AluI AGCT 6 cut(s) 38, 181, 445, 549, 835, 946
AlwI GGATC 3 cut(s) 720, 1205, 1441
AoxI GGCC 3 cut(s) 15, 1038, 1494
ApeKI GCWGC 2 cut(s) 287, 347
ApoI RAATTY 2 cut(s) 665, 754
AseI ATTAAT 1 cut(s) 1425
Asp700I GAANNNNTTC 1 cut(s) 651
AspLEI GCGC 1 cut(s) 1298
AspS9I GGNCC 6 cut(s) 250, 400, 611, 1098, 1313, 1494
AsuC2I CCSGG 1 cut(s) 19
AsuHPI GGTGA 2 cut(s) 422, 1019
AsuII TTCGAA 1 cut(s) 669
AvaII GGWCC 5 cut(s) 250, 400, 611, 1098, 1313
AxyI CCTNAGG 3 cut(s) 237, 292, 1452
BanI GGYRCC 2 cut(s) 1295, 1475
BanII GRGCYC 1 cut(s) 976
BbsI GAAGAC 1 cut(s) 846
BbvI GCAGC 2 cut(s) 299, 334
BccI CCATC 1 cut(s) 1348
BciT130I CCWGG 4 cut(s) 389, 1136, 1310, 1488
BclI TGATCA 1 cut(s) 1383
BcnI CCSGG 1 cut(s) 19
BfaI CTAG 4 cut(s) 50, 578, 639, 1589
BfoI RGCGCY 1 cut(s) 1299
BfuAI ACCTGC 1 cut(s) 388
BisI GCNGC 2 cut(s) 288, 348
BlsI GCNGC 2 cut(s) 289, 349
Bme1390I CCNGG 5 cut(s) 19, 389, 1136, 1310, 1488
Bme18I GGWCC 5 cut(s) 250, 400, 611, 1098, 1313
BmgT120I GGNCC 6 cut(s) 250, 400, 611, 1098, 1313, 1494
BmiI GGNNCC 5 cut(s) 401, 1297, 1314, 1477, 1567
BmrFI CCNGG 5 cut(s) 19, 389, 1136, 1310, 1488
BmsI GCATC 4 cut(s) 109, 870, 1216, 1340
BpiI GAAGAC 1 cut(s) 846
BplI GAGNNNNNCTC 2 cut(s) 921, 953
Bpu14I TTCGAA 1 cut(s) 669
BpuEI CTTGAG 1 cut(s) 940
BpuMI CCSGG 1 cut(s) 19
BsaBI GATNNNNATC 1 cut(s) 1236
BsaHI GRCGYC 1 cut(s) 1296
BsaJI CCNNGG 5 cut(s) 12, 705, 792, 1308, 1309
BsaWI WCCGGW 1 cut(s) 110
BsaXI ACNNNNNCTCC 2 cut(s) 68, 98
Bsc4I CCNNNNNNNGG 8 cut(s) 18, 198, 596, 793, 798, 906, 1036, 1472
Bse1I ACTGG 2 cut(s) 469, 1100
Bse21I CCTNAGG 3 cut(s) 237, 292, 1452
Bse3DI GCAATG 2 cut(s) 305, 1515
Bse8I GATNNNNATC 1 cut(s) 1236
BseBI CCWGG 4 cut(s) 389, 1136, 1310, 1488
BseDI CCNNGG 5 cut(s) 12, 705, 792, 1308, 1309
BseGI GGATG 3 cut(s) 505, 1331, 1359
BseJI GATNNNNATC 1 cut(s) 1236
BseLI CCNNNNNNNGG 8 cut(s) 18, 198, 596, 793, 798, 906, 1036, 1472
BseMI GCAATG 2 cut(s) 305, 1515
BseMII CTCAG 3 cut(s) 306, 563, 615
BseNI ACTGG 2 cut(s) 469, 1100
BseRI GAGGAG 1 cut(s) 30
BseXI GCAGC 2 cut(s) 299, 334
BsgI GTGCAG 1 cut(s) 932
Bsh1285I CGRYCG 1 cut(s) 115
BshFI GGCC 3 cut(s) 17, 1040, 1496
BshNI GGYRCC 2 cut(s) 1295, 1475
BsiEI CGRYCG 1 cut(s) 115
BsiSI CCGG 2 cut(s) 18, 111
BslFI GGGAC 3 cut(s) 549, 1326, 1517
BslI CCNNNNNNNGG 8 cut(s) 18, 198, 596, 793, 798, 906, 1036, 1472
BsmFI GGGAC 3 cut(s) 549, 1326, 1517
BsnI GGCC 3 cut(s) 17, 1040, 1496
Bsp119I TTCGAA 1 cut(s) 669
Bsp1286I GDGCHC 1 cut(s) 976
Bsp19I CCATGG 1 cut(s) 12
BspACI CCGC 1 cut(s) 122
BspANI GGCC 3 cut(s) 17, 1040, 1496
BspCNI CTCAG 3 cut(s) 305, 564, 614
BspLI GGNNCC 5 cut(s) 401, 1297, 1314, 1477, 1567
BspMI ACCTGC 1 cut(s) 388
BspPI GGATC 3 cut(s) 720, 1205, 1441
BspT104I TTCGAA 1 cut(s) 669
BspT107I GGYRCC 2 cut(s) 1295, 1475
BsrDI GCAATG 2 cut(s) 305, 1515
BsrI ACTGG 2 cut(s) 469, 1100
BssECI CCNNGG 5 cut(s) 12, 705, 792, 1308, 1309
BssNAI GTATAC 1 cut(s) 866
BssNI GRCGYC 1 cut(s) 1296
BssT1I CCWWGG 3 cut(s) 12, 705, 792
Bst1107I GTATAC 1 cut(s) 866
Bst2UI CCWGG 4 cut(s) 389, 1136, 1310, 1488
Bst4CI ACNGT 4 cut(s) 316, 876, 1322, 1372
Bst6I CTCTTC 1 cut(s) 971
BstACI GRCGYC 1 cut(s) 1296
BstAPI GCANNNNNTGC 1 cut(s) 1286
BstBI TTCGAA 1 cut(s) 669
BstC8I GCNNGC 7 cut(s) 179, 345, 470, 547, 551, 1090, 1329
BstDEI CTNAG 5 cut(s) 237, 292, 572, 601, 1452
BstDSI CCRYGG 1 cut(s) 12
BstENI CCTNNNNNAGG 1 cut(s) 904
BstF5I GGATG 3 cut(s) 505, 1331, 1359
BstH2I RGCGCY 1 cut(s) 1299
BstHHI GCGC 1 cut(s) 1298
BstMCI CGRYCG 1 cut(s) 115
BstMWI GCNNNNNNNGC 5 cut(s) 788, 980, 1286, 1295, 1304
BstNI CCWGG 4 cut(s) 389, 1136, 1310, 1488
BstNSI RCATGY 1 cut(s) 1331
BstSCI CCNGG 5 cut(s) 17, 387, 1134, 1308, 1486
BstV1I GCAGC 2 cut(s) 299, 334
BstV2I GAAGAC 1 cut(s) 846
BstX2I RGATCY 1 cut(s) 1210
BstXI CCANNNNNNTGG 1 cut(s) 464
BstYI RGATCY 1 cut(s) 1210
BstZ17I GTATAC 1 cut(s) 866
Bsu36I CCTNAGG 3 cut(s) 237, 292, 1452
BsuRI GGCC 3 cut(s) 17, 1040, 1496
BtgI CCRYGG 1 cut(s) 12
BtsCI GGATG 3 cut(s) 505, 1331, 1359
BveI ACCTGC 1 cut(s) 388
Cac8I GCNNGC 7 cut(s) 179, 345, 470, 547, 551, 1090, 1329
CfoI GCGC 1 cut(s) 1298
Cfr13I GGNCC 6 cut(s) 250, 400, 611, 1098, 1313, 1494
Csp6I GTAC 1 cut(s) 1407
CviAII CATG 9 cut(s) 13, 494, 608, 848, 1159, 1190, 1328, 1381, 1523
CviQI GTAC 1 cut(s) 1407
DdeI CTNAG 5 cut(s) 237, 292, 572, 601, 1452
DinI GGCGCC 1 cut(s) 1297
DraI TTTAAA 3 cut(s) 664, 1248, 1416
DrdI GACNNNNNNGTC 1 cut(s) 618
DseDI GACNNNNNNGTC 1 cut(s) 618
EaeI YGGCCR 1 cut(s) 15
Eam1104I CTCTTC 1 cut(s) 971
EarI CTCTTC 1 cut(s) 971
Eco130I CCWWGG 3 cut(s) 12, 705, 792
Eco24I GRGCYC 1 cut(s) 976
Eco47I GGWCC 5 cut(s) 250, 400, 611, 1098, 1313
Eco81I CCTNAGG 3 cut(s) 237, 292, 1452
EcoNI CCTNNNNNAGG 1 cut(s) 904
EcoO109I RGGNCCY 1 cut(s) 400
EcoRII CCWGG 4 cut(s) 387, 1134, 1308, 1486
EcoT14I CCWWGG 3 cut(s) 12, 705, 792
EcoT22I ATGCAT 1 cut(s) 1333
EcoT38I GRGCYC 1 cut(s) 976
EgeI GGCGCC 1 cut(s) 1297
EheI GGCGCC 1 cut(s) 1297
ErhI CCWWGG 3 cut(s) 12, 705, 792
FaeI CATG 9 cut(s) 16, 497, 611, 851, 1162, 1193, 1331, 1384, 1526
FalI AAGNNNNNCTT 2 cut(s) 27, 59
FaqI GGGAC 3 cut(s) 549, 1326, 1517
FatI CATG 9 cut(s) 12, 493, 607, 847, 1158, 1189, 1327, 1380, 1522
FauI CCCGC 1 cut(s) 115
FbaI TGATCA 1 cut(s) 1383
FblI GTMKAC 1 cut(s) 865
Fnu4HI GCNGC 2 cut(s) 288, 348
FokI GGATG 3 cut(s) 512, 1318, 1366
FriOI GRGCYC 1 cut(s) 976
Fsp4HI GCNGC 2 cut(s) 288, 348
FspBI CTAG 4 cut(s) 50, 578, 639, 1589
GlaI GCGC 1 cut(s) 1297
GluI GCNGC 2 cut(s) 288, 348
HaeII RGCGCY 1 cut(s) 1299
HaeIII GGCC 3 cut(s) 17, 1040, 1496
HapII CCGG 2 cut(s) 18, 111
HhaI GCGC 1 cut(s) 1298
Hin1I GRCGYC 1 cut(s) 1296
Hin1II CATG 9 cut(s) 16, 497, 611, 851, 1162, 1193, 1331, 1384, 1526
Hin6I GCGC 1 cut(s) 1296
HinP1I GCGC 1 cut(s) 1296
HindIII AAGCTT 4 cut(s) 443, 547, 833, 944
HinfI GANTC 5 cut(s) 168, 185, 202, 574, 925
HpaII CCGG 2 cut(s) 18, 111
HphI GGTGA 2 cut(s) 422, 1019
Hpy166II GTNNAC 1 cut(s) 866
Hpy188I TCNGA 9 cut(s) 129, 141, 201, 573, 604, 1108, 1344, 1537, 1545
Hpy8I GTNNAC 1 cut(s) 866
HpyAV CCTTC 4 cut(s) 269, 386, 1345, 1485
HpyCH4III ACNGT 4 cut(s) 316, 876, 1322, 1372
HpyCH4IV ACGT 1 cut(s) 1150
HpyF10VI GCNNNNNNNGC 5 cut(s) 788, 980, 1286, 1295, 1304
HpyF3I CTNAG 5 cut(s) 237, 292, 572, 601, 1452
HpySE526I ACGT 1 cut(s) 1150
Hsp92I GRCGYC 1 cut(s) 1296
Hsp92II CATG 9 cut(s) 16, 497, 611, 851, 1162, 1193, 1331, 1384, 1526
HspAI GCGC 1 cut(s) 1296
KasI GGCGCC 1 cut(s) 1295
Ksp22I TGATCA 1 cut(s) 1383
LmnI GCTCC 3 cut(s) 43, 1174, 1565
Lsp1109I GCAGC 2 cut(s) 299, 334
LweI GCATC 4 cut(s) 109, 870, 1216, 1340
MaeI CTAG 4 cut(s) 50, 578, 639, 1589
MaeII ACGT 1 cut(s) 1150
MaeIII GTNAC 4 cut(s) 241, 410, 760, 1007
MboII GAAGA 6 cut(s) 578, 851, 958, 968, 971, 1561
MfeI CAATTG 1 cut(s) 765
MflI RGATCY 1 cut(s) 1210
MhlI GDGCHC 1 cut(s) 976
Mly113I GGCGCC 1 cut(s) 1296
MlyI GAGTC 2 cut(s) 211, 583
MmeI TCCRAC 2 cut(s) 107, 1331
Mph1103I ATGCAT 1 cut(s) 1333
MroXI GAANNNNTTC 1 cut(s) 651
MseI TTAA 9 cut(s) 417, 663, 734, 1130, 1247, 1398, 1415, 1425, 1578
MslI CAYNNNNRTG 3 cut(s) 161, 498, 509
MspI CCGG 2 cut(s) 18, 111
MspR9I CCNGG 5 cut(s) 19, 389, 1136, 1310, 1488
MunI CAATTG 1 cut(s) 765
MvaI CCWGG 4 cut(s) 389, 1136, 1310, 1488
MwoI GCNNNNNNNGC 5 cut(s) 788, 980, 1286, 1295, 1304
NarI GGCGCC 1 cut(s) 1296
NciI CCSGG 1 cut(s) 19
NcoI CCATGG 1 cut(s) 12
NlaIII CATG 9 cut(s) 16, 497, 611, 851, 1162, 1193, 1331, 1384, 1526
NlaIV GGNNCC 5 cut(s) 401, 1297, 1314, 1477, 1567
NmuCI GTSAC 2 cut(s) 410, 1007
NsiI ATGCAT 1 cut(s) 1333
NspI RCATGY 1 cut(s) 1331
NspV TTCGAA 1 cut(s) 669
PaeI GCATGC 1 cut(s) 1331
PasI CCCWGGG 1 cut(s) 1309
PcsI WCGNNNNNNNCGW 1 cut(s) 145
PdmI GAANNNNTTC 1 cut(s) 651
PfeI GAWTC 3 cut(s) 168, 185, 925
PflMI CCANNNNNTGG 1 cut(s) 798
PfoI TCCNGGA 1 cut(s) 1134
PkrI GCNGC 2 cut(s) 289, 349
PleI GAGTC 2 cut(s) 210, 582
PluTI GGCGCC 1 cut(s) 1299
PpsI GAGTC 2 cut(s) 210, 582
PpuMI RGGWCCY 1 cut(s) 400
PshBI ATTAAT 1 cut(s) 1425
Psp1406I AACGTT 1 cut(s) 1150
Psp5II RGGWCCY 1 cut(s) 400
Psp6I CCWGG 4 cut(s) 387, 1134, 1308, 1486
PspGI CCWGG 4 cut(s) 387, 1134, 1308, 1486
PspN4I GGNNCC 5 cut(s) 401, 1297, 1314, 1477, 1567
PspPI GGNCC 6 cut(s) 250, 400, 611, 1098, 1313, 1494
PspPPI RGGWCCY 1 cut(s) 400
PsuI RGATCY 1 cut(s) 1210
RsaI GTAC 1 cut(s) 1408
RsaNI GTAC 1 cut(s) 1407
RseI CAYNNNNRTG 3 cut(s) 161, 498, 509
SaqAI TTAA 9 cut(s) 417, 663, 734, 1130, 1247, 1398, 1415, 1425, 1578
SatI GCNGC 2 cut(s) 288, 348
Sau96I GGNCC 6 cut(s) 250, 400, 611, 1098, 1313, 1494
SchI GAGTC 2 cut(s) 211, 583
ScrFI CCNGG 5 cut(s) 19, 389, 1136, 1310, 1488
SduI GDGCHC 1 cut(s) 976
SfaNI GCATC 4 cut(s) 109, 870, 1216, 1340
SfoI GGCGCC 1 cut(s) 1297
SfuI TTCGAA 1 cut(s) 669
SinI GGWCC 5 cut(s) 250, 400, 611, 1098, 1313
SmiMI CAYNNNNRTG 3 cut(s) 161, 498, 509
SmlI CTYRAG 1 cut(s) 919
SmoI CTYRAG 1 cut(s) 919
SphI GCATGC 1 cut(s) 1331
SsiI CCGC 1 cut(s) 122
SspDI GGCGCC 1 cut(s) 1295
SspI AATATT 3 cut(s) 1045, 1438, 1510
SspMI CTAG 4 cut(s) 50, 578, 639, 1589
StyD4I CCNGG 5 cut(s) 17, 387, 1134, 1308, 1486
StyI CCWWGG 3 cut(s) 12, 705, 792
TaaI ACNGT 4 cut(s) 316, 876, 1322, 1372
TaiI ACGT 1 cut(s) 1153
TaqI TCGA 4 cut(s) 115, 183, 669, 928
TfiI GAWTC 3 cut(s) 168, 185, 925
Tru1I TTAA 9 cut(s) 417, 663, 734, 1130, 1247, 1398, 1415, 1425, 1578
Tru9I TTAA 9 cut(s) 417, 663, 734, 1130, 1247, 1398, 1415, 1425, 1578
TseFI GTSAC 2 cut(s) 410, 1007
TseI GCWGC 2 cut(s) 287, 347
Tsp45I GTSAC 2 cut(s) 410, 1007
TspDTI ATGAA 7 cut(s) 308, 453, 573, 864, 1281, 1476, 1539
Van91I CCANNNNNTGG 1 cut(s) 798
VpaK11BI GGWCC 5 cut(s) 250, 400, 611, 1098, 1313
VspI ATTAAT 1 cut(s) 1425
XagI CCTNNNNNAGG 1 cut(s) 904
XapI RAATTY 2 cut(s) 665, 754
XbaI TCTAGA 2 cut(s) 577, 1588
XceI RCATGY 1 cut(s) 1331
XmiI GTMKAC 1 cut(s) 865
XmnI GAANNNNTTC 1 cut(s) 651
XspI CTAG 4 cut(s) 50, 578, 639, 1589
Zsp2I ATGCAT 1 cut(s) 1333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.