ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 2 cut(s) | 5, 175 |
| AgsI | TTSAA | 2 cut(s) | 52, 148 |
| AleI | CACNNNNGTG | 1 cut(s) | 233 |
| AluBI | AGCT | 1 cut(s) | 109 |
| AluI | AGCT | 1 cut(s) | 109 |
| Alw21I | GWGCWC | 1 cut(s) | 111 |
| AoxI | GGCC | 1 cut(s) | 217 |
| AspS9I | GGNCC | 1 cut(s) | 8 |
| AsuHPI | GGTGA | 4 cut(s) | 80, 107, 247, 260 |
| AvaII | GGWCC | 1 cut(s) | 8 |
| BanII | GRGCYC | 1 cut(s) | 111 |
| BbsI | GAAGAC | 1 cut(s) | 166 |
| Bbv12I | GWGCWC | 1 cut(s) | 111 |
| Bme18I | GGWCC | 1 cut(s) | 8 |
| BmgT120I | GGNCC | 1 cut(s) | 8 |
| BmiI | GGNNCC | 1 cut(s) | 10 |
| BpiI | GAAGAC | 1 cut(s) | 166 |
| BsaJI | CCNNGG | 1 cut(s) | 80 |
| Bse1I | ACTGG | 1 cut(s) | 204 |
| BseDI | CCNNGG | 1 cut(s) | 80 |
| BseMII | CTCAG | 1 cut(s) | 24 |
| BseNI | ACTGG | 1 cut(s) | 204 |
| BseRI | GAGGAG | 1 cut(s) | 101 |
| BshFI | GGCC | 1 cut(s) | 219 |
| BsiHKAI | GWGCWC | 1 cut(s) | 111 |
| BslFI | GGGAC | 1 cut(s) | 125 |
| BsmFI | GGGAC | 1 cut(s) | 125 |
| BsmI | GAATGC | 1 cut(s) | 49 |
| BsnI | GGCC | 1 cut(s) | 219 |
| Bsp1286I | GDGCHC | 1 cut(s) | 111 |
| Bsp19I | CCATGG | 1 cut(s) | 80 |
| BspANI | GGCC | 1 cut(s) | 219 |
| BspCNI | CTCAG | 1 cut(s) | 25 |
| BspLI | GGNNCC | 1 cut(s) | 10 |
| BsrI | ACTGG | 1 cut(s) | 204 |
| BssECI | CCNNGG | 1 cut(s) | 80 |
| BssT1I | CCWWGG | 1 cut(s) | 80 |
| Bst4CI | ACNGT | 2 cut(s) | 8, 165 |
| BstDEI | CTNAG | 1 cut(s) | 33 |
| BstDSI | CCRYGG | 1 cut(s) | 80 |
| BstEII | GGTNACC | 1 cut(s) | 95 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 216 |
| BstPI | GGTNACC | 1 cut(s) | 95 |
| BstV2I | GAAGAC | 1 cut(s) | 166 |
| BsuRI | GGCC | 1 cut(s) | 219 |
| BtgI | CCRYGG | 1 cut(s) | 80 |
| Cfr13I | GGNCC | 1 cut(s) | 8 |
| Csp6I | GTAC | 2 cut(s) | 4, 174 |
| CviAII | CATG | 1 cut(s) | 81 |
| CviJI | RGCY | 3 cut(s) | 109, 210, 219 |
| CviKI_1 | RGCY | 3 cut(s) | 109, 210, 219 |
| CviQI | GTAC | 2 cut(s) | 4, 174 |
| DdeI | CTNAG | 1 cut(s) | 33 |
| Ecl136II | GAGCTC | 1 cut(s) | 109 |
| Eco130I | CCWWGG | 1 cut(s) | 80 |
| Eco24I | GRGCYC | 1 cut(s) | 111 |
| Eco47I | GGWCC | 1 cut(s) | 8 |
| Eco53kI | GAGCTC | 1 cut(s) | 109 |
| Eco91I | GGTNACC | 1 cut(s) | 95 |
| EcoICRI | GAGCTC | 1 cut(s) | 109 |
| EcoO65I | GGTNACC | 1 cut(s) | 95 |
| EcoT14I | CCWWGG | 1 cut(s) | 80 |
| EcoT22I | ATGCAT | 1 cut(s) | 49 |
| EcoT38I | GRGCYC | 1 cut(s) | 111 |
| ErhI | CCWWGG | 1 cut(s) | 80 |
| FaeI | CATG | 1 cut(s) | 84 |
| FaiI | YATR | 4 cut(s) | 82, 123, 172, 213 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 214, 246 |
| FaqI | GGGAC | 1 cut(s) | 125 |
| FatI | CATG | 1 cut(s) | 80 |
| FriOI | GRGCYC | 1 cut(s) | 111 |
| HaeIII | GGCC | 1 cut(s) | 219 |
| Hin1II | CATG | 1 cut(s) | 84 |
| HinfI | GANTC | 1 cut(s) | 148 |
| HphI | GGTGA | 4 cut(s) | 80, 107, 247, 260 |
| Hpy166II | GTNNAC | 1 cut(s) | 228 |
| Hpy188I | TCNGA | 1 cut(s) | 34 |
| Hpy8I | GTNNAC | 1 cut(s) | 228 |
| HpyAV | CCTTC | 2 cut(s) | 125, 239 |
| HpyCH4III | ACNGT | 2 cut(s) | 8, 165 |
| HpyCH4V | TGCA | 1 cut(s) | 47 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 216 |
| HpyF3I | CTNAG | 1 cut(s) | 33 |
| Hsp92II | CATG | 1 cut(s) | 84 |
| LmnI | GCTCC | 1 cut(s) | 114 |
| LpnPI | CCDG | 1 cut(s) | 185 |
| MaeIII | GTNAC | 3 cut(s) | 68, 95, 195 |
| MboII | GAAGA | 1 cut(s) | 171 |
| MhlI | GDGCHC | 1 cut(s) | 111 |
| MmeI | TCCRAC | 1 cut(s) | 20 |
| MnlI | CCTC | 1 cut(s) | 122 |
| Mph1103I | ATGCAT | 1 cut(s) | 49 |
| MseI | TTAA | 1 cut(s) | 265 |
| MslI | CAYNNNNRTG | 1 cut(s) | 233 |
| Mva1269I | GAATGC | 1 cut(s) | 49 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 216 |
| NcoI | CCATGG | 1 cut(s) | 80 |
| NlaIII | CATG | 1 cut(s) | 84 |
| NlaIV | GGNNCC | 1 cut(s) | 10 |
| NmuCI | GTSAC | 2 cut(s) | 68, 95 |
| NsiI | ATGCAT | 1 cut(s) | 49 |
| OliI | CACNNNNGTG | 1 cut(s) | 233 |
| PctI | GAATGC | 1 cut(s) | 49 |
| PfeI | GAWTC | 1 cut(s) | 148 |
| Psp124BI | GAGCTC | 1 cut(s) | 111 |
| PspEI | GGTNACC | 1 cut(s) | 95 |
| PspN4I | GGNNCC | 1 cut(s) | 10 |
| PspPI | GGNCC | 1 cut(s) | 8 |
| RsaI | GTAC | 2 cut(s) | 5, 175 |
| RsaNI | GTAC | 2 cut(s) | 4, 174 |
| RseI | CAYNNNNRTG | 1 cut(s) | 233 |
| SacI | GAGCTC | 1 cut(s) | 111 |
| SaqAI | TTAA | 1 cut(s) | 265 |
| Sau96I | GGNCC | 1 cut(s) | 8 |
| SduI | GDGCHC | 1 cut(s) | 111 |
| SetI | ASST | 5 cut(s) | 102, 111, 136, 227, 250 |
| SgeI | CNNG | 4 cut(s) | 77, 93, 212, 243 |
| SinI | GGWCC | 1 cut(s) | 8 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 233 |
| SstI | GAGCTC | 1 cut(s) | 111 |
| StyI | CCWWGG | 1 cut(s) | 80 |
| TaaI | ACNGT | 2 cut(s) | 8, 165 |
| TaqI | TCGA | 1 cut(s) | 157 |
| TatI | WGTACW | 1 cut(s) | 173 |
| TfiI | GAWTC | 1 cut(s) | 148 |
| Tru1I | TTAA | 1 cut(s) | 265 |
| Tru9I | TTAA | 1 cut(s) | 265 |
| TseFI | GTSAC | 2 cut(s) | 68, 95 |
| Tsp45I | GTSAC | 2 cut(s) | 68, 95 |
| TspDTI | ATGAA | 1 cut(s) | 138 |
| VpaK11BI | GGWCC | 1 cut(s) | 8 |
| Zsp2I | ATGCAT | 1 cut(s) | 49 |