Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 231 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 185 |
| AcoI | YGGCCR | 1 cut(s) | 38 |
| AcuI | CTGAAG | 1 cut(s) | 114 |
| AfaI | GTAC | 1 cut(s) | 310 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 185 |
| AflIII | ACRYGT | 1 cut(s) | 326 |
| AgsI | TTSAA | 1 cut(s) | 251 |
| AjnI | CCWGG | 1 cut(s) | 40 |
| AluBI | AGCT | 3 cut(s) | 139, 151, 351 |
| AluI | AGCT | 3 cut(s) | 139, 151, 351 |
| AoxI | GGCC | 1 cut(s) | 38 |
| BccI | CCATC | 1 cut(s) | 179 |
| BceAI | ACGGC | 1 cut(s) | 53 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 107, 141 |
| BciT130I | CCWGG | 1 cut(s) | 42 |
| BciVI | GTATCC | 2 cut(s) | 100, 341 |
| BfaI | CTAG | 3 cut(s) | 111, 140, 352 |
| BfuI | GTATCC | 2 cut(s) | 100, 341 |
| Bme1390I | CCNGG | 1 cut(s) | 42 |
| BmrFI | CCNGG | 1 cut(s) | 42 |
| BmsI | GCATC | 1 cut(s) | 115 |
| BpuEI | CTTGAG | 1 cut(s) | 39 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 185 |
| Bse3DI | GCAATG | 1 cut(s) | 197 |
| BseBI | CCWGG | 1 cut(s) | 42 |
| BseGI | GGATG | 3 cut(s) | 130, 190, 253 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 185 |
| BseMI | GCAATG | 1 cut(s) | 197 |
| BshFI | GGCC | 1 cut(s) | 40 |
| BslFI | GGGAC | 1 cut(s) | 35 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 185 |
| BsmFI | GGGAC | 1 cut(s) | 35 |
| BsnI | GGCC | 1 cut(s) | 40 |
| Bsp143I | GATC | 1 cut(s) | 300 |
| BspANI | GGCC | 1 cut(s) | 40 |
| BsrDI | GCAATG | 1 cut(s) | 197 |
| BssMI | GATC | 1 cut(s) | 300 |
| Bst2UI | CCWGG | 1 cut(s) | 42 |
| BstDEI | CTNAG | 2 cut(s) | 11, 147 |
| BstF5I | GGATG | 3 cut(s) | 130, 190, 253 |
| BstKTI | GATC | 1 cut(s) | 303 |
| BstMBI | GATC | 1 cut(s) | 300 |
| BstNI | CCWGG | 1 cut(s) | 42 |
| BstNSI | RCATGY | 1 cut(s) | 330 |
| BstSCI | CCNGG | 1 cut(s) | 40 |
| BsuI | GTATCC | 2 cut(s) | 100, 341 |
| BsuRI | GGCC | 1 cut(s) | 40 |
| BtsCI | GGATG | 3 cut(s) | 130, 190, 253 |
| Csp6I | GTAC | 1 cut(s) | 309 |
| CviAII | CATG | 1 cut(s) | 327 |
| CviJI | RGCY | 5 cut(s) | 40, 139, 151, 201, 351 |
| CviKI_1 | RGCY | 5 cut(s) | 40, 139, 151, 201, 351 |
| CviQI | GTAC | 1 cut(s) | 309 |
| DdeI | CTNAG | 2 cut(s) | 11, 147 |
| DpnI | GATC | 1 cut(s) | 302 |
| DpnII | GATC | 1 cut(s) | 300 |
| EaeI | YGGCCR | 1 cut(s) | 38 |
| Eco57I | CTGAAG | 1 cut(s) | 114 |
| EcoRII | CCWGG | 1 cut(s) | 40 |
| FaeI | CATG | 1 cut(s) | 330 |
| FaiI | YATR | 4 cut(s) | 231, 264, 324, 328 |
| FaqI | GGGAC | 1 cut(s) | 35 |
| FatI | CATG | 1 cut(s) | 326 |
| FokI | GGATG | 3 cut(s) | 137, 197, 240 |
| FspBI | CTAG | 3 cut(s) | 111, 140, 352 |
| HaeIII | GGCC | 1 cut(s) | 40 |
| Hin1II | CATG | 1 cut(s) | 330 |
| HindIII | AAGCTT | 1 cut(s) | 149 |
| HinfI | GANTC | 1 cut(s) | 114 |
| Hpy166II | GTNNAC | 1 cut(s) | 35 |
| Hpy188I | TCNGA | 1 cut(s) | 133 |
| Hpy188III | TCNNGA | 2 cut(s) | 86, 248 |
| Hpy8I | GTNNAC | 1 cut(s) | 35 |
| HpyF3I | CTNAG | 2 cut(s) | 11, 147 |
| Hsp92II | CATG | 1 cut(s) | 330 |
| Kzo9I | GATC | 1 cut(s) | 300 |
| LpnPI | CCDG | 3 cut(s) | 27, 54, 291 |
| LweI | GCATC | 1 cut(s) | 115 |
| MaeI | CTAG | 3 cut(s) | 111, 140, 352 |
| MalI | GATC | 1 cut(s) | 302 |
| MboI | GATC | 1 cut(s) | 300 |
| MboII | GAAGA | 1 cut(s) | 63 |
| MluCI | AATT | 2 cut(s) | 19, 226 |
| MlyI | GAGTC | 1 cut(s) | 108 |
| MmeI | TCCRAC | 1 cut(s) | 203 |
| MnlI | CCTC | 3 cut(s) | 63, 267, 344 |
| MseI | TTAA | 1 cut(s) | 101 |
| MspR9I | CCNGG | 1 cut(s) | 42 |
| MvaI | CCWGG | 1 cut(s) | 42 |
| NdeII | GATC | 1 cut(s) | 300 |
| NlaIII | CATG | 1 cut(s) | 330 |
| NspI | RCATGY | 1 cut(s) | 330 |
| PciI | ACATGT | 1 cut(s) | 326 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 185 |
| PleI | GAGTC | 1 cut(s) | 108 |
| PpsI | GAGTC | 1 cut(s) | 108 |
| PscI | ACATGT | 1 cut(s) | 326 |
| PsiI | TTATAA | 1 cut(s) | 231 |
| Psp6I | CCWGG | 1 cut(s) | 40 |
| PspGI | CCWGG | 1 cut(s) | 40 |
| RsaI | GTAC | 1 cut(s) | 310 |
| RsaNI | GTAC | 1 cut(s) | 309 |
| SaqAI | TTAA | 1 cut(s) | 101 |
| Sau3AI | GATC | 1 cut(s) | 300 |
| SchI | GAGTC | 1 cut(s) | 108 |
| ScrFI | CCNGG | 1 cut(s) | 42 |
| SetI | ASST | 5 cut(s) | 46, 65, 141, 153, 353 |
| SfaNI | GCATC | 1 cut(s) | 115 |
| SmlI | CTYRAG | 1 cut(s) | 54 |
| SmoI | CTYRAG | 1 cut(s) | 54 |
| Sse9I | AATT | 2 cut(s) | 19, 226 |
| SspI | AATATT | 1 cut(s) | 235 |
| SspMI | CTAG | 3 cut(s) | 111, 140, 352 |
| StyD4I | CCNGG | 1 cut(s) | 40 |
| TaqI | TCGA | 1 cut(s) | 117 |
| TasI | AATT | 2 cut(s) | 19, 226 |
| Tru1I | TTAA | 1 cut(s) | 101 |
| Tru9I | TTAA | 1 cut(s) | 101 |
| TspDTI | ATGAA | 2 cut(s) | 234, 257 |
| TspGWI | ACGGA | 1 cut(s) | 197 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 185 |
| XceI | RCATGY | 1 cut(s) | 330 |
| XspI | CTAG | 3 cut(s) | 111, 140, 352 |