Rmu_sc0000271.1_g000028

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000271.1
OG0000147
Physical Location & Seq
Forward (+)
138027 .. 143057
5031 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000271.1_g000028.1.cds

Sequence Viewer

Length: 1563 bp
atgtttgtcacggaaatcctgtatgggtgcaaactgtctcttttgaatgagcgagagtgccagcaccgtggggtgcagtcgtcggggcggcattaccctagcttcactggtagtatcggtggcagtagcactaacagtcggctcttggagagactaggactggaagcatggtcgctgggtttcaacgaggttgaatctcgtcttcttttgccagttgactccgaagacttgaatgggtatgtggccatcccctctgatgttgcttcgattagtggaaagggaagtggtagagggggttatggaggtagagggtcgtgtggtagaggccggtttgggcgtgggggtggcaggaagggtcgtgggagtgggcctcaagttagaagattcggcaccttcacaaataggcctgggcatagtcgggccgggtcgatttcaggctcaaaccgaagtcgaaccgatccaatcggaatcccatttatgataccgaacaccatattgttggtagcttgggccgaattccggaatcggaccaggtcgatcccagagaagagagcgacgtcggagaagagggagaagttggagatggctgggagagacattggagagttgagagatgagagatccgttgagagagtgagagttgagagatcgagtgtctcaaatgagggatctaagatcggctgtgtgggattgggacgtgccttgacagtccagaaattgggagagctagttcgctctcatgtcctattggtgatcttcttatgtgaaacgaagcaacataactacaaagttaacaacttgagaagaagacttgggcactataaaggtgaaattgtgaaaccatcagacacggcggtgggaggactaaccttgtggtggcgaccagatgttgatgtccaggttatttccaaaaagcataatttgattgattctattattatggtgaaaagtgaaaacaaattctttagagctacttggttctatggtcctccttataatgttgacaaaccagagttctgggcatcggtgaacaactttgctactaatgatgggtgcccatgggtttgcatcggtgattttaacaagattctcagcaatgatgaaaaggagggaggaattccttggagttggaatcggcccctcaactcagaatggcttgatagttgtcccgattcacaggttattcatgagacgacagtcggctctgatcactgcccaaacttactgagcattgctactaagcagaggggtagttctcgctctttcaaatttgaggctatgtgggctactgaccctgattgcagtgaagttgttagtaacaactggagttttggggccagccaaaatccatatattctttggtctcaaaaactgggtgcttgtagaagaaatttgattaagtggagcaaagagaggttcccaaataacaagaaattgattgagtgtctcaatcttgagctctctatcatccaggaggccctaatgggattggaggatagaaatagggaggctgagattacttcggagattcagaggttgtggtctaatgaagaaatattttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

520

Amino Acids

58.33

Weight (kDa)

9.19

Isoelectric Point (pI)

44.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000147)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10354 FvH4_1g17131 FvH4_2g11611 FvH4_2g33851 FvH4_3g32112 FvH4_3g35052 FvH4_3g44611 FvH4_4g05921 FvH4_4g06411 FvH4_4g06792 FvH4_4g10365 FvH4_4g21422 FvH4_4g22401 FvH4_4g30261 FvH4_5g08843 FvH4_5g14731 FvH4_5g24781 FvH4_5g26231 FvH4_5g31282 FvH4_6g23371 FvH4_6g38511 FvH4_7g01171 FvH4_7g03341 FvH4_7g06171 FvH4_7g32472
prunus_persica Prupe.2G036900_v2.0.a1
pyrus_communis pycom02g19900 pycom03g01520 pycom05g10510 pycom16g23820
rosa_chinensis RchiOBHm_Chr1g0316031 RchiOBHm_Chr1g0342451 RchiOBHm_Chr1g0344541 RchiOBHm_Chr1g0364721 RchiOBHm_Chr2g0133541 RchiOBHm_Chr2g0134511 RchiOBHm_Chr2g0145891 RchiOBHm_Chr2g0163241 RchiOBHm_Chr5g0027201 RchiOBHm_Chr5g0027881 RchiOBHm_Chr5g0047471 RchiOBHm_Chr7g0210901
rosa_laevigata RLG00000011116 RLG00000017964 RLG00000018128 RLG00000018387 RLG00000018829 RLG00000019353 RLG00000028973 RLG00000035870 RLG00000036629
rosa_multiflora Rmu_co8126340.1_g000001 Rmu_co8216750.1_g000001 Rmu_co8222072.1_g000001 Rmu_co8332453.1_g000001 Rmu_co8349913.1_g000001 Rmu_co8405337.1_g000001 Rmu_sc0000041.1_g000012 Rmu_sc0000166.1_g000029 Rmu_sc0000251.1_g000019 Rmu_sc0000271.1_g000028 Rmu_sc0000509.1_g000036 Rmu_sc0000543.1_g000048 Rmu_sc0000808.1_g000003 Rmu_sc0000847.1_g000040 Rmu_sc0000972.1_g000020 Rmu_sc0001260.1_g000001 Rmu_sc0001464.1_g000026 Rmu_sc0001616.1_g000003 Rmu_sc0001669.1_g000001 Rmu_sc0002005.1_g000001 Rmu_sc0002014.1_g000010 Rmu_sc0002082.1_g000033 Rmu_sc0002302.1_g000024 Rmu_sc0002531.1_g000045 Rmu_sc0003276.1_g000002 Rmu_sc0003737.1_g000007 Rmu_sc0003832.1_g000022 Rmu_sc0004080.1_g000011 Rmu_sc0004487.1_g000009 Rmu_sc0004988.1_g000018 Rmu_sc0004988.1_g000019 Rmu_sc0005254.1_g000002 Rmu_sc0005733.1_g000004 Rmu_sc0006413.1_g000006 Rmu_sc0007121.1_g000013 Rmu_sc0007869.1_g000006 Rmu_sc0008035.1_g000015 Rmu_sc0008279.1_g000017 Rmu_sc0008351.1_g000014 Rmu_sc0008957.1_g000007 Rmu_sc0009012.1_g000007 Rmu_sc0010556.1_g000009 Rmu_sc0012889.1_g000003 Rmu_sc0019808.1_g000004 Rmu_sc0028113.1_g000001 Rmu_sc0031202.1_g000001 Rmu_sc0034436.1_g000001 Rmu_sc0034445.1_g000001 Rmu_sc0040044.1_g000001 Rmu_ssc0000062.1_g000032 Rmu_ssc0000372.1_g000018
rosa_roxburghii Rroxscaffold_1G00001520 Rroxscaffold_1G00039990 Rroxscaffold_1G00046370 Rroxscaffold_2G00110140 Rroxscaffold_2G00131420 Rroxscaffold_3G00222390 Rroxscaffold_5G00336040 Rroxscaffold_5G00338000 Rroxscaffold_5G00344030 Rroxscaffold_5G00363460 Rroxscaffold_6G00402000 Rroxscaffold_7G00194940
rosa_rugosa Rorug01G0106500 Rorug01G0111300 Rorug01G0247000 Rorug02G0318100.1 Rorug02G0318200 Rorug02G0459500 Rorug03G0108100 Rorug03G0200500 Rorug03G0232500 Rorug03G0240600 Rorug04G0105300 Rorug04G0256600 Rorug06G0079300 Rorug06G0082700 Rorug06G0095600 Rorug06G0179000 Rorug07G0113500 Rorug07G0271100
rosa_samantha Rh1AG087200 Rh1CG085300 Rh1DG013200 Rh1DG091700 Rh1DG091800 Rh1DG338300 Rh2AG375400 Rh2AG407000 Rh2AG513500 Rh2BG277700 Rh2BG371200 Rh2BG376100 Rh2BG580500 Rh2CG354300 Rh2DG200100 Rh2DG388000 Rh2DG393500 Rh2DG426400 Rh3CG304800 Rh4AG044600 Rh4AG220500 Rh4BG379300 Rh4CG007100 Rh4CG030300 Rh4CG038000 Rh4CG114900 Rh4CG393700 Rh5AG124900 Rh5AG342300 Rh5BG414400 Rh5CG263800 Rh5CG439000 Rh5DG231100 Rh5DG566900 Rh6AG138600 Rh6AG200000 Rh6AG253100 Rh6AG390900 Rh6AG441600 Rh6BG194700 Rh6BG225800 Rh6BG256100 Rh6CG231700 Rh6CG231900 Rh6CG312200 Rh6CG453700 Rh6DG219400 Rh7AG357700 Rh7AG442000 Rh7CG425700 Rh7CG474600 Rh7CG494100 Rh7DG253900 Rh7DG294700 Rh7DG401600 Rh7DG461300
rosa_wichuraiana Rw1G001190 Rw2G047020 Rw4G003490 Rw5G039690 Rw6G010450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 996
AatII GACGTC 1 cut(s) 560
AccB1I GGYRCC 2 cut(s) 389, 1053
AccB7I CCANNNNNTGG 1 cut(s) 718
AccIII TCCGGA 1 cut(s) 519
AciI CCGC 2 cut(s) 88, 854
AclWI GGATC 4 cut(s) 452, 532, 615, 676
AcoI YGGCCR 1 cut(s) 243
AcsI RAATTY 5 cut(s) 515, 959, 1116, 1268, 1390
AcyI GRCGYC 1 cut(s) 557
AfiI CCNNNNNNNGG 3 cut(s) 519, 718, 876
AgsI TTSAA 5 cut(s) 46, 184, 194, 232, 1267
AjiI CACGTC 1 cut(s) 698
AjnI CCWGG 4 cut(s) 406, 530, 897, 1470
AleI CACNNNNGTG 1 cut(s) 854
AloI GAACNNNNNNTCC 2 cut(s) 714, 746
AluBI AGCT 5 cut(s) 102, 506, 727, 971, 1459
AluI AGCT 5 cut(s) 102, 506, 727, 971, 1459
Alw21I GWGCWC 1 cut(s) 1461
Alw26I GTCTC 7 cut(s) 42, 145, 588, 661, 1184, 1368, 1451
AlwI GGATC 4 cut(s) 452, 532, 615, 676
Aor13HI TCCGGA 1 cut(s) 519
AoxI GGCC 9 cut(s) 243, 325, 368, 404, 420, 510, 1136, 1335, 1476
ApoI RAATTY 5 cut(s) 515, 959, 1116, 1268, 1390
AspS9I GGNCC 8 cut(s) 368, 420, 510, 528, 986, 1137, 1335, 1477
AsuC2I CCSGG 1 cut(s) 424
AsuHPI GGTGA 5 cut(s) 763, 839, 955, 1039, 1085
AvaII GGWCC 2 cut(s) 528, 986
BaeGI GKGCMC 2 cut(s) 819, 1058
BalI TGGCCA 1 cut(s) 245
BanI GGYRCC 2 cut(s) 389, 1053
BanII GRGCYC 1 cut(s) 1461
BbsI GAAGAC 3 cut(s) 194, 231, 814
Bbv12I GWGCWC 1 cut(s) 1461
BccI CCATC 4 cut(s) 254, 577, 850, 1043
BceAI ACGGC 1 cut(s) 867
BciT130I CCWGG 4 cut(s) 408, 532, 899, 1472
BclI TGATCA 1 cut(s) 1207
BcnI CCSGG 1 cut(s) 424
BcoDI GTCTC 7 cut(s) 42, 145, 588, 661, 1184, 1368, 1451
BfaI CTAG 3 cut(s) 99, 155, 728
BisI GCNGC 1 cut(s) 89
BlsI GCNGC 1 cut(s) 90
Bme1390I CCNGG 5 cut(s) 408, 424, 532, 899, 1472
Bme18I GGWCC 2 cut(s) 528, 986
BmgBI CACGTC 1 cut(s) 698
BmgT120I GGNCC 8 cut(s) 368, 420, 510, 528, 986, 1137, 1335, 1477
BmiI GGNNCC 5 cut(s) 391, 1055, 1139, 1336, 1418
BmrFI CCNGG 5 cut(s) 408, 424, 532, 899, 1472
BmrI ACTGGG 1 cut(s) 1382
BmsI GCATC 2 cut(s) 1031, 1077
BmuI ACTGGG 1 cut(s) 1382
BoxI GACNNNNGTC 1 cut(s) 1196
BpiI GAAGAC 3 cut(s) 194, 231, 814
BplI GAGNNNNNCTC 2 cut(s) 355, 387
BpmI CTGGAG 1 cut(s) 1345
BpuEI CTTGAG 3 cut(s) 357, 820, 1475
BpuMI CCSGG 1 cut(s) 424
BsaHI GRCGYC 1 cut(s) 557
BsaI GGTCTC 1 cut(s) 1368
BsaJI CCNNGG 4 cut(s) 67, 407, 1058, 1121
BsaWI WCCGGW 1 cut(s) 519
BsaXI ACNNNNNCTCC 2 cut(s) 714, 744
Bsc4I CCNNNNNNNGG 3 cut(s) 519, 718, 876
Bse118I RCCGGY 1 cut(s) 327
Bse1I ACTGG 5 cut(s) 112, 165, 212, 1328, 1377
Bse3DI GCAATG 2 cut(s) 1102, 1230
BseAI TCCGGA 1 cut(s) 519
BseBI CCWGG 4 cut(s) 408, 532, 899, 1472
BseDI CCNNGG 4 cut(s) 67, 407, 1058, 1121
BseGI GGATG 2 cut(s) 246, 1467
BseLI CCNNNNNNNGG 3 cut(s) 519, 718, 876
BseMI GCAATG 2 cut(s) 1102, 1230
BseMII CTCAG 4 cut(s) 1105, 1161, 1217, 1503
BseNI ACTGG 5 cut(s) 112, 165, 212, 1328, 1377
BseSI GKGCMC 2 cut(s) 819, 1058
BseYI CCCAGC 2 cut(s) 175, 587
BsgI GTGCAG 1 cut(s) 95
BshFI GGCC 9 cut(s) 245, 327, 370, 406, 422, 512, 1138, 1337, 1478
BshNI GGYRCC 2 cut(s) 389, 1053
BsiHKAI GWGCWC 1 cut(s) 1461
BsiSI CCGG 3 cut(s) 328, 423, 520
BslFI GGGAC 2 cut(s) 708, 1152
BslI CCNNNNNNNGG 3 cut(s) 519, 718, 876
BsmAI GTCTC 7 cut(s) 42, 145, 588, 661, 1184, 1368, 1451
BsmBI CGTCTC 1 cut(s) 1184
BsmFI GGGAC 2 cut(s) 708, 1152
BsnI GGCC 9 cut(s) 245, 327, 370, 406, 422, 512, 1138, 1337, 1478
Bso31I GGTCTC 1 cut(s) 1368
Bsp1286I GDGCHC 3 cut(s) 819, 1058, 1461
Bsp13I TCCGGA 1 cut(s) 519
Bsp143I GATC 8 cut(s) 457, 537, 620, 647, 668, 675, 753, 1207
Bsp19I CCATGG 1 cut(s) 1058
BspACI CCGC 2 cut(s) 88, 854
BspANI GGCC 9 cut(s) 245, 327, 370, 406, 422, 512, 1138, 1337, 1478
BspCNI CTCAG 4 cut(s) 1104, 1160, 1218, 1504
BspEI TCCGGA 1 cut(s) 519
BspHI TCATGA 1 cut(s) 1186
BspLI GGNNCC 5 cut(s) 391, 1055, 1139, 1336, 1418
BspPI GGATC 4 cut(s) 452, 532, 615, 676
BspT107I GGYRCC 2 cut(s) 389, 1053
BspTNI GGTCTC 1 cut(s) 1368
BsrDI GCAATG 2 cut(s) 1102, 1230
BsrFI RCCGGY 1 cut(s) 327
BsrI ACTGG 5 cut(s) 112, 165, 212, 1328, 1377
BssAI RCCGGY 1 cut(s) 327
BssECI CCNNGG 4 cut(s) 67, 407, 1058, 1121
BssMI GATC 8 cut(s) 457, 537, 620, 647, 668, 675, 753, 1207
BssNI GRCGYC 1 cut(s) 557
BssT1I CCWWGG 2 cut(s) 1058, 1121
Bst2UI CCWGG 4 cut(s) 408, 532, 899, 1472
Bst4CI ACNGT 5 cut(s) 36, 68, 137, 709, 1198
Bst6I CTCTTC 2 cut(s) 542, 560
BstACI GRCGYC 1 cut(s) 557
BstC8I GCNNGC 2 cut(s) 62, 1339
BstDEI CTNAG 6 cut(s) 672, 1091, 1147, 1226, 1239, 1512
BstDSI CCRYGG 2 cut(s) 67, 1058
BstF5I GGATG 2 cut(s) 246, 1467
BstKTI GATC 8 cut(s) 460, 540, 623, 650, 671, 678, 756, 1210
BstMAI GTCTC 7 cut(s) 42, 145, 588, 661, 1184, 1368, 1451
BstMBI GATC 8 cut(s) 457, 537, 620, 647, 668, 675, 753, 1207
BstMWI GCNNNNNNNGC 1 cut(s) 1283
BstNI CCWGG 4 cut(s) 408, 532, 899, 1472
BstPAI GACNNNNGTC 1 cut(s) 1196
BstSCI CCNGG 5 cut(s) 406, 422, 530, 897, 1470
BstSLI GKGCMC 2 cut(s) 819, 1058
BstV2I GAAGAC 3 cut(s) 194, 231, 814
BstX2I RGATCY 2 cut(s) 620, 668
BstXI CCANNNNNNTGG 3 cut(s) 68, 499, 1017
BstYI RGATCY 2 cut(s) 620, 668
BsuRI GGCC 9 cut(s) 245, 327, 370, 406, 422, 512, 1138, 1337, 1478
BtgI CCRYGG 2 cut(s) 67, 1058
BtrI CACGTC 1 cut(s) 698
BtsCI GGATG 2 cut(s) 246, 1467
BtsI GCAGTG 2 cut(s) 1210, 1309
BtsIMutI CAGTG 3 cut(s) 105, 1210, 1309
Cac8I GCNNGC 2 cut(s) 62, 1339
CciI TCATGA 1 cut(s) 1186
Cfr10I RCCGGY 1 cut(s) 327
Cfr13I GGNCC 8 cut(s) 368, 420, 510, 528, 986, 1137, 1335, 1477
CsiI ACCWGGT 1 cut(s) 530
CviAII CATG 4 cut(s) 168, 740, 1059, 1187
DdeI CTNAG 6 cut(s) 672, 1091, 1147, 1226, 1239, 1512
DpnI GATC 8 cut(s) 459, 539, 622, 649, 670, 677, 755, 1209
DpnII GATC 8 cut(s) 457, 537, 620, 647, 668, 675, 753, 1207
EaeI YGGCCR 1 cut(s) 243
Eam1104I CTCTTC 2 cut(s) 542, 560
EarI CTCTTC 2 cut(s) 542, 560
Ecl136II GAGCTC 1 cut(s) 1459
Eco130I CCWWGG 2 cut(s) 1058, 1121
Eco147I AGGCCT 1 cut(s) 406
Eco24I GRGCYC 1 cut(s) 1461
Eco31I GGTCTC 1 cut(s) 1368
Eco47I GGWCC 2 cut(s) 528, 986
Eco53kI GAGCTC 1 cut(s) 1459
EcoICRI GAGCTC 1 cut(s) 1459
EcoO109I RGGNCCY 1 cut(s) 1477
EcoRI GAATTC 2 cut(s) 515, 1116
EcoRII CCWGG 4 cut(s) 406, 530, 897, 1470
EcoT14I CCWWGG 2 cut(s) 1058, 1121
EcoT38I GRGCYC 1 cut(s) 1461
ErhI CCWWGG 2 cut(s) 1058, 1121
Esp3I CGTCTC 1 cut(s) 1184
FaeI CATG 4 cut(s) 171, 743, 1062, 1190
FaqI GGGAC 2 cut(s) 708, 1152
FatI CATG 4 cut(s) 167, 739, 1058, 1186
FbaI TGATCA 1 cut(s) 1207
Fnu4HI GCNGC 1 cut(s) 89
FokI GGATG 2 cut(s) 233, 1454
FriOI GRGCYC 1 cut(s) 1461
Fsp4HI GCNGC 1 cut(s) 89
FspBI CTAG 3 cut(s) 99, 155, 728
GluI GCNGC 1 cut(s) 89
GsaI CCCAGC 2 cut(s) 179, 591
GsuI CTGGAG 1 cut(s) 1345
HaeIII GGCC 9 cut(s) 245, 327, 370, 406, 422, 512, 1138, 1337, 1478
HapII CCGG 3 cut(s) 328, 423, 520
Hin1I GRCGYC 1 cut(s) 557
Hin1II CATG 4 cut(s) 171, 743, 1062, 1190
HincII GTYRAC 3 cut(s) 217, 793, 1003
HindII GTYRAC 3 cut(s) 217, 793, 1003
HpaI GTTAAC 1 cut(s) 793
HpaII CCGG 3 cut(s) 328, 423, 520
HphI GGTGA 5 cut(s) 763, 839, 955, 1039, 1085
Hpy166II GTNNAC 4 cut(s) 217, 793, 1003, 1030
Hpy188III TCNNGA 5 cut(s) 520, 712, 1169, 1187, 1454
Hpy8I GTNNAC 4 cut(s) 217, 793, 1003, 1030
Hpy99I CGWCG 3 cut(s) 85, 559, 562
HpyAV CCTTC 2 cut(s) 346, 403
HpyCH4III ACNGT 5 cut(s) 36, 68, 137, 709, 1198
HpyCH4IV ACGT 2 cut(s) 557, 697
HpyCH4V TGCA 4 cut(s) 30, 76, 1068, 1302
HpyF10VI GCNNNNNNNGC 1 cut(s) 1283
HpyF3I CTNAG 6 cut(s) 672, 1091, 1147, 1226, 1239, 1512
HpySE526I ACGT 2 cut(s) 557, 697
Hsp92I GRCGYC 1 cut(s) 557
Hsp92II CATG 4 cut(s) 171, 743, 1062, 1190
Kpn2I TCCGGA 1 cut(s) 519
Ksp22I TGATCA 1 cut(s) 1207
KspAI GTTAAC 1 cut(s) 793
Kzo9I GATC 8 cut(s) 457, 537, 620, 647, 668, 675, 753, 1207
LmnI GCTCC 1 cut(s) 1404
LweI GCATC 2 cut(s) 1031, 1077
MabI ACCWGGT 1 cut(s) 530
MaeI CTAG 3 cut(s) 99, 155, 728
MaeII ACGT 2 cut(s) 557, 697
MaeIII GTNAC 2 cut(s) 7, 1316
MalI GATC 8 cut(s) 459, 539, 622, 649, 670, 677, 755, 1209
MboI GATC 8 cut(s) 457, 537, 620, 647, 668, 675, 753, 1207
MflI RGATCY 2 cut(s) 620, 668
MhlI GDGCHC 3 cut(s) 819, 1058, 1461
MlsI TGGCCA 1 cut(s) 245
MluCI AATT 9 cut(s) 515, 716, 831, 919, 959, 1116, 1268, 1390, 1433
MluNI TGGCCA 1 cut(s) 245
MlyI GAGTC 1 cut(s) 212
MmeI TCCRAC 3 cut(s) 540, 558, 1109
Mox20I TGGCCA 1 cut(s) 245
MroI TCCGGA 1 cut(s) 519
MscI TGGCCA 1 cut(s) 245
MseI TTAA 3 cut(s) 792, 1080, 1398
MslI CAYNNNNRTG 1 cut(s) 854
Msp20I TGGCCA 1 cut(s) 245
MspI CCGG 3 cut(s) 328, 423, 520
MspR9I CCNGG 5 cut(s) 408, 424, 532, 899, 1472
MvaI CCWGG 4 cut(s) 408, 532, 899, 1472
MwoI GCNNNNNNNGC 1 cut(s) 1283
NciI CCSGG 1 cut(s) 424
NcoI CCATGG 1 cut(s) 1058
NdeII GATC 8 cut(s) 457, 537, 620, 647, 668, 675, 753, 1207
NlaIII CATG 4 cut(s) 171, 743, 1062, 1190
NlaIV GGNNCC 5 cut(s) 391, 1055, 1139, 1336, 1418
NmuCI GTSAC 1 cut(s) 7
OliI CACNNNNGTG 1 cut(s) 854
PagI TCATGA 1 cut(s) 1186
PceI AGGCCT 1 cut(s) 406
PfeI GAWTC 9 cut(s) 194, 384, 468, 523, 929, 1087, 1132, 1172, 1528
PflFI GACNNNGTC 1 cut(s) 532
PflMI CCANNNNNTGG 1 cut(s) 718
PfoI TCCNGGA 1 cut(s) 1470
PkrI GCNGC 1 cut(s) 90
PleI GAGTC 1 cut(s) 212
PpsI GAGTC 1 cut(s) 212
PshAI GACNNNNGTC 1 cut(s) 1196
PsiI TTATAA 1 cut(s) 996
Psp124BI GAGCTC 1 cut(s) 1461
Psp6I CCWGG 4 cut(s) 406, 530, 897, 1470
PspFI CCCAGC 2 cut(s) 175, 587
PspGI CCWGG 4 cut(s) 406, 530, 897, 1470
PspN4I GGNNCC 5 cut(s) 391, 1055, 1139, 1336, 1418
PspPI GGNCC 8 cut(s) 368, 420, 510, 528, 986, 1137, 1335, 1477
PsuI RGATCY 2 cut(s) 620, 668
PsyI GACNNNGTC 1 cut(s) 532
RseI CAYNNNNRTG 1 cut(s) 854
SacI GAGCTC 1 cut(s) 1461
SaqAI TTAA 3 cut(s) 792, 1080, 1398
SatI GCNGC 1 cut(s) 89
Sau3AI GATC 8 cut(s) 457, 537, 620, 647, 668, 675, 753, 1207
Sau96I GGNCC 8 cut(s) 368, 420, 510, 528, 986, 1137, 1335, 1477
SchI GAGTC 1 cut(s) 212
ScrFI CCNGG 5 cut(s) 408, 424, 532, 899, 1472
SduI GDGCHC 3 cut(s) 819, 1058, 1461
SexAI ACCWGGT 1 cut(s) 530
SfaNI GCATC 2 cut(s) 1031, 1077
SinI GGWCC 2 cut(s) 528, 986
SmiMI CAYNNNNRTG 1 cut(s) 854
SmlI CTYRAG 3 cut(s) 372, 799, 1454
SmoI CTYRAG 3 cut(s) 372, 799, 1454
Sse9I AATT 9 cut(s) 515, 716, 831, 919, 959, 1116, 1268, 1390, 1433
SseBI AGGCCT 1 cut(s) 406
SsiI CCGC 2 cut(s) 88, 854
SspI AATATT 1 cut(s) 1557
SspMI CTAG 3 cut(s) 99, 155, 728
SstI GAGCTC 1 cut(s) 1461
StuI AGGCCT 1 cut(s) 406
StyD4I CCNGG 5 cut(s) 406, 422, 530, 897, 1470
StyI CCWWGG 2 cut(s) 1058, 1121
TaaI ACNGT 5 cut(s) 36, 68, 137, 709, 1198
TaiI ACGT 2 cut(s) 560, 700
TaqI TCGA 5 cut(s) 266, 428, 451, 536, 650
TasI AATT 9 cut(s) 515, 716, 831, 919, 959, 1116, 1268, 1390, 1433
TauI GCSGC 1 cut(s) 91
TfiI GAWTC 9 cut(s) 194, 384, 468, 523, 929, 1087, 1132, 1172, 1528
Tru1I TTAA 3 cut(s) 792, 1080, 1398
Tru9I TTAA 3 cut(s) 792, 1080, 1398
TscAI CASTG 3 cut(s) 112, 1217, 1309
TseFI GTSAC 1 cut(s) 7
Tsp45I GTSAC 1 cut(s) 7
TspDTI ATGAA 3 cut(s) 1116, 1175, 1563
TspGWI ACGGA 2 cut(s) 26, 613
TspRI CASTG 3 cut(s) 112, 1217, 1309
Tth111I GACNNNGTC 1 cut(s) 532
Van91I CCANNNNNTGG 1 cut(s) 718
VpaK11BI GGWCC 2 cut(s) 528, 986
XapI RAATTY 5 cut(s) 515, 959, 1116, 1268, 1390
XcmI CCANNNNNNNNNTGG 1 cut(s) 1356
XspI CTAG 3 cut(s) 99, 155, 728
ZraI GACGTC 1 cut(s) 558
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.