Rh7DG253900

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000147
Physical Location & Seq
Reverse (-)
26462070 .. 26468442
6373 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG253900.1

Sequence Viewer

Length: 1266 bp
ATGGAGACTCGACAGCAAGAATCAGTACTCAAGCTTTGGATGCGTCAACTTGGTTTTGATCATTTCTTTGTAGTTGATCCAACAAATAATGGGGGTGGTGGTCTTGCTCTCTTTTGGGACAACTCAGTCCAAGTCTCTAGTATTAGCGGCACGGTTAATTATATAAATACTAGTATGTTTTTCATTTCTGAAAATTTCCATTGTAATGTGTCCTGGTTGTATGGAAACCCCCATGTTAAACAAAAGACAGCTTTCTGGCGTTCTTTGTACACAGTCTTCTCCCCTCATGTTTTACCATGGTTGTGCTTGGGGGATTTCAACGAAATTCTATGGCTGCATGAAAAATGGGGTGGCCTCCCTCAGTCACGCTGGAGGATTAATTTGTTCAAAGATTTTCTGAATCATGCCCATCTATCAGATCTTCTTTTCCAAGGGCCGGATTATACTTGGTACTGCTTTCAACATGTTAAGGTGGTTATTAAGGAAAGGTTGGACCGCACCCTTGGCAACAATGCTTGGATTGCAAATCAACCGAACACCCAAGTCTTTCACCTTCCTTTACTTGGTTCAGATCATCGTCCAATTATGCTGGACACTAAACCCACGGAGCGTTTGGCTCCGCCTATCTTCCGCTTCGAACATTTGTGGACTACACACCCATCTAGCATACAGATTGTCCAAGCCAATTGGCAGACTTCTTCTTCCCCATCACAGGCTACAAACTGGGCTTCCAATCTCAATGAGTGCCGAGCTTACCTCTCCTCGTGGGCAAAAGATACTTTTCCAAATTTTGGCAAACTTGATTCTGACAGCCAAAGCAGGATCCAGTCTCTTTTGGACTCTGATCTTCCTGATGCCCATCAGCAAATCACTGCTGTGTCTGATGATATAGCATCCCATTGGGCCCTGGAAGAATTATATTGGAAGCAAAGGTCTAGGGTCTCGTGGCTTGCTCATGGTGACCTTAACACCCGTTACTTCCACCAGGCAACAATCATGTGTCGACGAAGAAATAAGATTCTGAGACTCCAAAATGAGTTTGGTCACTGTAATTCACCACCACATCTGAGAGGTACCTTTGCATGTCGACACTCGGTCAAGGCTTCACGCATCAACAGCAAAGGCCAGCAGTTTCATATGGAGCCTTGTCTCCCCATTCGGCAGTCACAATCCAAATTTCTTATTTCCCTACCACCCACCAATACATTATTCTTCCAACGGCTCTTTTGCCAGCCAGGAGGCCAGGAGCTTCTCCCAATTACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

421

Amino Acids

48.85

Weight (kDa)

8.82

Isoelectric Point (pI)

45.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos PF03372 14 - 192 2.8e-08 Endonuclease/Exonuclease/phosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000147)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10354 FvH4_1g17131 FvH4_2g11611 FvH4_2g33851 FvH4_3g32112 FvH4_3g35052 FvH4_3g44611 FvH4_4g05921 FvH4_4g06411 FvH4_4g06792 FvH4_4g10365 FvH4_4g21422 FvH4_4g22401 FvH4_4g30261 FvH4_5g08843 FvH4_5g14731 FvH4_5g24781 FvH4_5g26231 FvH4_5g31282 FvH4_6g23371 FvH4_6g38511 FvH4_7g01171 FvH4_7g03341 FvH4_7g06171 FvH4_7g32472
prunus_persica Prupe.2G036900_v2.0.a1
pyrus_communis pycom02g19900 pycom03g01520 pycom05g10510 pycom16g23820
rosa_chinensis RchiOBHm_Chr1g0316031 RchiOBHm_Chr1g0342451 RchiOBHm_Chr1g0344541 RchiOBHm_Chr1g0364721 RchiOBHm_Chr2g0133541 RchiOBHm_Chr2g0134511 RchiOBHm_Chr2g0145891 RchiOBHm_Chr2g0163241 RchiOBHm_Chr5g0027201 RchiOBHm_Chr5g0027881 RchiOBHm_Chr5g0047471 RchiOBHm_Chr7g0210901
rosa_laevigata RLG00000011116 RLG00000017964 RLG00000018128 RLG00000018387 RLG00000018829 RLG00000019353 RLG00000028973 RLG00000035870 RLG00000036629
rosa_multiflora Rmu_co8126340.1_g000001 Rmu_co8216750.1_g000001 Rmu_co8222072.1_g000001 Rmu_co8332453.1_g000001 Rmu_co8349913.1_g000001 Rmu_co8405337.1_g000001 Rmu_sc0000041.1_g000012 Rmu_sc0000166.1_g000029 Rmu_sc0000251.1_g000019 Rmu_sc0000271.1_g000028 Rmu_sc0000509.1_g000036 Rmu_sc0000543.1_g000048 Rmu_sc0000808.1_g000003 Rmu_sc0000847.1_g000040 Rmu_sc0000972.1_g000020 Rmu_sc0001260.1_g000001 Rmu_sc0001464.1_g000026 Rmu_sc0001616.1_g000003 Rmu_sc0001669.1_g000001 Rmu_sc0002005.1_g000001 Rmu_sc0002014.1_g000010 Rmu_sc0002082.1_g000033 Rmu_sc0002302.1_g000024 Rmu_sc0002531.1_g000045 Rmu_sc0003276.1_g000002 Rmu_sc0003737.1_g000007 Rmu_sc0003832.1_g000022 Rmu_sc0004080.1_g000011 Rmu_sc0004487.1_g000009 Rmu_sc0004988.1_g000018 Rmu_sc0004988.1_g000019 Rmu_sc0005254.1_g000002 Rmu_sc0005733.1_g000004 Rmu_sc0006413.1_g000006 Rmu_sc0007121.1_g000013 Rmu_sc0007869.1_g000006 Rmu_sc0008035.1_g000015 Rmu_sc0008279.1_g000017 Rmu_sc0008351.1_g000014 Rmu_sc0008957.1_g000007 Rmu_sc0009012.1_g000007 Rmu_sc0010556.1_g000009 Rmu_sc0012889.1_g000003 Rmu_sc0019808.1_g000004 Rmu_sc0028113.1_g000001 Rmu_sc0031202.1_g000001 Rmu_sc0034436.1_g000001 Rmu_sc0034445.1_g000001 Rmu_sc0040044.1_g000001 Rmu_ssc0000062.1_g000032 Rmu_ssc0000372.1_g000018
rosa_roxburghii Rroxscaffold_1G00001520 Rroxscaffold_1G00039990 Rroxscaffold_1G00046370 Rroxscaffold_2G00110140 Rroxscaffold_2G00131420 Rroxscaffold_3G00222390 Rroxscaffold_5G00336040 Rroxscaffold_5G00338000 Rroxscaffold_5G00344030 Rroxscaffold_5G00363460 Rroxscaffold_6G00402000 Rroxscaffold_7G00194940
rosa_rugosa Rorug01G0106500 Rorug01G0111300 Rorug01G0247000 Rorug02G0318100.1 Rorug02G0318200 Rorug02G0459500 Rorug03G0108100 Rorug03G0200500 Rorug03G0232500 Rorug03G0240600 Rorug04G0105300 Rorug04G0256600 Rorug06G0079300 Rorug06G0082700 Rorug06G0095600 Rorug06G0179000 Rorug07G0113500 Rorug07G0271100
rosa_samantha Rh1AG087200 Rh1CG085300 Rh1DG013200 Rh1DG091700 Rh1DG091800 Rh1DG338300 Rh2AG375400 Rh2AG407000 Rh2AG513500 Rh2BG277700 Rh2BG371200 Rh2BG376100 Rh2BG580500 Rh2CG354300 Rh2DG200100 Rh2DG388000 Rh2DG393500 Rh2DG426400 Rh3CG304800 Rh4AG044600 Rh4AG220500 Rh4BG379300 Rh4CG007100 Rh4CG030300 Rh4CG038000 Rh4CG114900 Rh4CG393700 Rh5AG124900 Rh5AG342300 Rh5BG414400 Rh5CG263800 Rh5CG439000 Rh5DG231100 Rh5DG566900 Rh6AG138600 Rh6AG200000 Rh6AG253100 Rh6AG390900 Rh6AG441600 Rh6BG194700 Rh6BG225800 Rh6BG256100 Rh6CG231700 Rh6CG231900 Rh6CG312200 Rh6CG453700 Rh6DG219400 Rh7AG357700 Rh7AG442000 Rh7CG425700 Rh7CG474600 Rh7CG494100 Rh7DG253900 Rh7DG294700 Rh7DG401600 Rh7DG461300
rosa_wichuraiana Rw1G001190 Rw2G047020 Rw4G003490 Rw5G039690 Rw6G010450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 125
Acc65I GGTACC 1 cut(s) 1073
AccB1I GGYRCC 1 cut(s) 1073
AccB7I CCANNNNNTGG 1 cut(s) 791
AccI GTMKAC 2 cut(s) 1003, 1087
AciI CCGC 4 cut(s) 147, 496, 620, 631
AclWI GGATC 3 cut(s) 71, 817, 830
AcsI RAATTY 4 cut(s) 193, 324, 787, 1175
AfaI GTAC 4 cut(s) 27, 269, 452, 1075
AfiI CCNNNNNNNGG 4 cut(s) 436, 563, 712, 791
AflIII ACRYGT 1 cut(s) 463
AgsI TTSAA 3 cut(s) 319, 388, 461
AhdI GACNNNNNGTC 1 cut(s) 1094
AhlI ACTAGT 1 cut(s) 170
AjnI CCWGG 5 cut(s) 212, 906, 984, 1234, 1242
AjuI GAANNNNNNNTTGG 2 cut(s) 1193, 1225
AleI CACNNNNGTG 1 cut(s) 875
AluBI AGCT 4 cut(s) 34, 251, 752, 1249
AluI AGCT 4 cut(s) 34, 251, 752, 1249
Alw26I GTCTC 5 cut(s) 139, 834, 946, 1018, 1154
AlwI GGATC 3 cut(s) 71, 817, 830
AoxI GGCC 5 cut(s) 352, 434, 903, 1123, 1240
ApaI GGGCCC 1 cut(s) 907
ApeKI GCWGC 1 cut(s) 334
ApoI RAATTY 4 cut(s) 193, 324, 787, 1175
AseI ATTAAT 1 cut(s) 378
Asp718I GGTACC 1 cut(s) 1073
AspS9I GGNCC 4 cut(s) 434, 493, 903, 904
AsuHPI GGTGA 3 cut(s) 542, 971, 1047
AsuII TTCGAA 1 cut(s) 636
AvaII GGWCC 1 cut(s) 493
BaeGI GKGCMC 1 cut(s) 907
BamHI GGATCC 1 cut(s) 822
BanI GGYRCC 1 cut(s) 1073
BanII GRGCYC 1 cut(s) 907
BarI GAAGNNNNNNTAC 2 cut(s) 260, 292
BauI CACGAG 2 cut(s) 763, 943
BbsI GAAGAC 1 cut(s) 268
BbvI GCAGC 1 cut(s) 321
BccI CCATC 4 cut(s) 417, 667, 715, 867
BceAI ACGGC 1 cut(s) 1235
BciT130I CCWGG 5 cut(s) 214, 908, 986, 1236, 1244
BclI TGATCA 1 cut(s) 58
BcoDI GTCTC 5 cut(s) 139, 834, 946, 1018, 1154
BcuI ACTAGT 1 cut(s) 170
BfaI CTAG 4 cut(s) 138, 171, 663, 936
BglII AGATCT 1 cut(s) 418
BisI GCNGC 2 cut(s) 148, 335
BlsI GCNGC 2 cut(s) 149, 336
BmcAI AGTACT 1 cut(s) 27
Bme1390I CCNGG 5 cut(s) 214, 908, 986, 1236, 1244
Bme18I GGWCC 1 cut(s) 493
BmeRI GACNNNNNGTC 1 cut(s) 1094
BmgT120I GGNCC 4 cut(s) 434, 493, 903, 904
BmiI GGNNCC 5 cut(s) 618, 824, 905, 1075, 1143
BmrFI CCNGG 5 cut(s) 214, 908, 986, 1236, 1244
BmrI ACTGGG 1 cut(s) 733
BmsI GCATC 4 cut(s) 30, 844, 902, 1119
BmuI ACTGGG 1 cut(s) 733
BpiI GAAGAC 1 cut(s) 268
BplI GAGNNNNNCTC 2 cut(s) 741, 773
BpmI CTGGAG 1 cut(s) 391
Bpu14I TTCGAA 1 cut(s) 636
BpuEI CTTGAG 1 cut(s) 14
BsaBI GATNNNNATC 1 cut(s) 858
BsaI GGTCTC 1 cut(s) 946
BsaJI CCNNGG 5 cut(s) 296, 430, 502, 603, 906
Bsc4I CCNNNNNNNGG 4 cut(s) 436, 563, 712, 791
Bse1I ACTGG 2 cut(s) 728, 826
Bse8I GATNNNNATC 1 cut(s) 858
BseBI CCWGG 5 cut(s) 214, 908, 986, 1236, 1244
BseDI CCNNGG 5 cut(s) 296, 430, 502, 603, 906
BseGI GGATG 2 cut(s) 45, 893
BseJI GATNNNNATC 1 cut(s) 858
BseLI CCNNNNNNNGG 4 cut(s) 436, 563, 712, 791
BseMII CTCAG 4 cut(s) 138, 374, 1013, 1058
BseNI ACTGG 2 cut(s) 728, 826
BseRI GAGGAG 1 cut(s) 751
BseSI GKGCMC 1 cut(s) 907
BseXI GCAGC 1 cut(s) 321
BshFI GGCC 5 cut(s) 354, 436, 905, 1125, 1242
BshNI GGYRCC 1 cut(s) 1073
BsiSI CCGG 1 cut(s) 437
BslFI GGGAC 1 cut(s) 131
BslI CCNNNNNNNGG 4 cut(s) 436, 563, 712, 791
BsmAI GTCTC 5 cut(s) 139, 834, 946, 1018, 1154
BsmFI GGGAC 1 cut(s) 131
BsnI GGCC 5 cut(s) 354, 436, 905, 1125, 1242
Bso31I GGTCTC 1 cut(s) 946
Bsp119I TTCGAA 1 cut(s) 636
Bsp120I GGGCCC 1 cut(s) 903
Bsp1286I GDGCHC 1 cut(s) 907
Bsp1407I TGTACA 1 cut(s) 267
Bsp143I GATC 6 cut(s) 58, 76, 418, 571, 822, 844
Bsp19I CCATGG 1 cut(s) 296
BspACI CCGC 4 cut(s) 147, 496, 620, 631
BspANI GGCC 5 cut(s) 354, 436, 905, 1125, 1242
BspCNI CTCAG 4 cut(s) 137, 373, 1014, 1059
BspLI GGNNCC 5 cut(s) 618, 824, 905, 1075, 1143
BspPI GGATC 3 cut(s) 71, 817, 830
BspT104I TTCGAA 1 cut(s) 636
BspT107I GGYRCC 1 cut(s) 1073
BspTNI GGTCTC 1 cut(s) 946
BsrGI TGTACA 1 cut(s) 267
BsrI ACTGG 2 cut(s) 728, 826
BssECI CCNNGG 5 cut(s) 296, 430, 502, 603, 906
BssMI GATC 6 cut(s) 58, 76, 418, 571, 822, 844
BssSI CACGAG 2 cut(s) 763, 943
BssT1I CCWWGG 3 cut(s) 296, 430, 502
Bst2BI CACGAG 2 cut(s) 763, 943
Bst2UI CCWGG 5 cut(s) 214, 908, 986, 1236, 1244
Bst4CI ACNGT 3 cut(s) 154, 274, 1049
BstAUI TGTACA 1 cut(s) 267
BstBI TTCGAA 1 cut(s) 636
BstC8I GCNNGC 3 cut(s) 951, 1127, 1232
BstDEI CTNAG 4 cut(s) 124, 360, 1022, 1067
BstDSI CCRYGG 2 cut(s) 296, 603
BstEII GGTNACC 1 cut(s) 959
BstF5I GGATG 2 cut(s) 45, 893
BstKTI GATC 6 cut(s) 61, 79, 421, 574, 825, 847
BstMAI GTCTC 5 cut(s) 139, 834, 946, 1018, 1154
BstMBI GATC 6 cut(s) 58, 76, 418, 571, 822, 844
BstMWI GCNNNNNNNGC 4 cut(s) 40, 504, 521, 1116
BstNI CCWGG 5 cut(s) 214, 908, 986, 1236, 1244
BstNSI RCATGY 2 cut(s) 467, 1086
BstPI GGTNACC 1 cut(s) 959
BstSCI CCNGG 5 cut(s) 212, 906, 984, 1234, 1242
BstSLI GKGCMC 1 cut(s) 907
BstV1I GCAGC 1 cut(s) 321
BstV2I GAAGAC 1 cut(s) 268
BstX2I RGATCY 2 cut(s) 418, 822
BstYI RGATCY 2 cut(s) 418, 822
BsuRI GGCC 5 cut(s) 354, 436, 905, 1125, 1242
BtgI CCRYGG 2 cut(s) 296, 603
BtsCI GGATG 2 cut(s) 45, 893
BtsI GCAGTG 1 cut(s) 870
BtsIMutI CAGTG 2 cut(s) 870, 1045
Cac8I GCNNGC 3 cut(s) 951, 1127, 1232
Cfr13I GGNCC 4 cut(s) 434, 493, 903, 904
CseI GACGC 1 cut(s) 32
Csp6I GTAC 4 cut(s) 26, 268, 451, 1074
CviAII CATG 9 cut(s) 233, 287, 297, 338, 404, 464, 956, 997, 1083
CviQI GTAC 4 cut(s) 26, 268, 451, 1074
DdeI CTNAG 4 cut(s) 124, 360, 1022, 1067
DpnI GATC 6 cut(s) 60, 78, 420, 573, 824, 846
DpnII GATC 6 cut(s) 58, 76, 418, 571, 822, 844
DrdI GACNNNNNNGTC 1 cut(s) 125
DriI GACNNNNNGTC 1 cut(s) 1094
DseDI GACNNNNNNGTC 1 cut(s) 125
Eam1105I GACNNNNNGTC 1 cut(s) 1094
EciI GGCGGA 1 cut(s) 609
Eco130I CCWWGG 3 cut(s) 296, 430, 502
Eco24I GRGCYC 1 cut(s) 907
Eco31I GGTCTC 1 cut(s) 946
Eco47I GGWCC 1 cut(s) 493
Eco91I GGTNACC 1 cut(s) 959
EcoO109I RGGNCCY 1 cut(s) 904
EcoO65I GGTNACC 1 cut(s) 959
EcoRII CCWGG 5 cut(s) 212, 906, 984, 1234, 1242
EcoT14I CCWWGG 3 cut(s) 296, 430, 502
EcoT38I GRGCYC 1 cut(s) 907
ErhI CCWWGG 3 cut(s) 296, 430, 502
FaeI CATG 9 cut(s) 236, 290, 300, 341, 407, 467, 959, 1000, 1086
FaqI GGGAC 1 cut(s) 131
FatI CATG 9 cut(s) 232, 286, 296, 337, 403, 463, 955, 996, 1082
FauNDI CATATG 1 cut(s) 1137
FbaI TGATCA 1 cut(s) 58
FblI GTMKAC 2 cut(s) 1003, 1087
Fnu4HI GCNGC 2 cut(s) 148, 335
FokI GGATG 2 cut(s) 52, 880
FriOI GRGCYC 1 cut(s) 907
Fsp4HI GCNGC 2 cut(s) 148, 335
FspBI CTAG 4 cut(s) 138, 171, 663, 936
GluI GCNGC 2 cut(s) 148, 335
GsuI CTGGAG 1 cut(s) 391
HaeIII GGCC 5 cut(s) 354, 436, 905, 1125, 1242
HapII CCGG 1 cut(s) 437
HgaI GACGC 1 cut(s) 32
Hin1II CATG 9 cut(s) 236, 290, 300, 341, 407, 467, 959, 1000, 1086
HincII GTYRAC 3 cut(s) 47, 1004, 1088
HindII GTYRAC 3 cut(s) 47, 1004, 1088
HindIII AAGCTT 1 cut(s) 32
HinfI GANTC 7 cut(s) 7, 20, 400, 803, 839, 1018, 1026
HpaII CCGG 1 cut(s) 437
HphI GGTGA 3 cut(s) 542, 971, 1047
Hpy166II GTNNAC 5 cut(s) 47, 270, 648, 1004, 1088
Hpy188I TCNGA 9 cut(s) 190, 399, 418, 571, 808, 844, 883, 1023, 1068
Hpy188III TCNNGA 1 cut(s) 851
Hpy8I GTNNAC 5 cut(s) 47, 270, 648, 1004, 1088
Hpy99I CGWCG 1 cut(s) 1008
HpyAV CCTTC 1 cut(s) 563
HpyCH4III ACNGT 3 cut(s) 154, 274, 1049
HpyCH4V TGCA 3 cut(s) 337, 524, 1082
HpyF10VI GCNNNNNNNGC 4 cut(s) 40, 504, 521, 1116
HpyF3I CTNAG 4 cut(s) 124, 360, 1022, 1067
Hsp92II CATG 9 cut(s) 236, 290, 300, 341, 407, 467, 959, 1000, 1086
KpnI GGTACC 1 cut(s) 1077
Ksp22I TGATCA 1 cut(s) 58
Kzo9I GATC 6 cut(s) 58, 76, 418, 571, 822, 844
LmnI GCTCC 4 cut(s) 607, 622, 1141, 1246
Lsp1109I GCAGC 1 cut(s) 321
LweI GCATC 4 cut(s) 30, 844, 902, 1119
MaeI CTAG 4 cut(s) 138, 171, 663, 936
MaeIII GTNAC 5 cut(s) 363, 959, 974, 1043, 1164
MalI GATC 6 cut(s) 60, 78, 420, 573, 824, 846
MboI GATC 6 cut(s) 58, 76, 418, 571, 822, 844
MboII GAAGA 9 cut(s) 268, 413, 619, 690, 693, 839, 923, 1020, 1204
MfeI CAATTG 1 cut(s) 685
MflI RGATCY 2 cut(s) 418, 822
MhlI GDGCHC 1 cut(s) 907
MlyI GAGTC 2 cut(s) 833, 1020
MmeI TCCRAC 3 cut(s) 104, 471, 1240
MnlI CCTC 8 cut(s) 294, 365, 366, 369, 767, 772, 1064, 1232
MseI TTAA 6 cut(s) 156, 237, 378, 468, 480, 966
MslI CAYNNNNRTG 3 cut(s) 204, 301, 875
MspI CCGG 1 cut(s) 437
MspR9I CCNGG 5 cut(s) 214, 908, 986, 1236, 1244
MunI CAATTG 1 cut(s) 685
MvaI CCWGG 5 cut(s) 214, 908, 986, 1236, 1244
MwoI GCNNNNNNNGC 4 cut(s) 40, 504, 521, 1116
NcoI CCATGG 1 cut(s) 296
NdeI CATATG 1 cut(s) 1137
NdeII GATC 6 cut(s) 58, 76, 418, 571, 822, 844
NlaIII CATG 9 cut(s) 236, 290, 300, 341, 407, 467, 959, 1000, 1086
NlaIV GGNNCC 5 cut(s) 618, 824, 905, 1075, 1143
NmeAIII GCCGAG 1 cut(s) 773
NmuCI GTSAC 4 cut(s) 363, 959, 1043, 1164
NspI RCATGY 2 cut(s) 467, 1086
NspV TTCGAA 1 cut(s) 636
OliI CACNNNNGTG 1 cut(s) 875
PciI ACATGT 1 cut(s) 463
PfeI GAWTC 4 cut(s) 20, 400, 803, 1018
PflMI CCANNNNNTGG 1 cut(s) 791
PkrI GCNGC 2 cut(s) 149, 336
PleI GAGTC 2 cut(s) 833, 1020
PpsI GAGTC 2 cut(s) 833, 1020
PscI ACATGT 1 cut(s) 463
PshBI ATTAAT 1 cut(s) 378
Psp6I CCWGG 5 cut(s) 212, 906, 984, 1234, 1242
PspEI GGTNACC 1 cut(s) 959
PspGI CCWGG 5 cut(s) 212, 906, 984, 1234, 1242
PspN4I GGNNCC 5 cut(s) 618, 824, 905, 1075, 1143
PspOMI GGGCCC 1 cut(s) 903
PspPI GGNCC 4 cut(s) 434, 493, 903, 904
PsuI RGATCY 2 cut(s) 418, 822
RsaI GTAC 4 cut(s) 27, 269, 452, 1075
RsaNI GTAC 4 cut(s) 26, 268, 451, 1074
RseI CAYNNNNRTG 3 cut(s) 204, 301, 875
SalI GTCGAC 2 cut(s) 1002, 1086
SaqAI TTAA 6 cut(s) 156, 237, 378, 468, 480, 966
SatI GCNGC 2 cut(s) 148, 335
Sau3AI GATC 6 cut(s) 58, 76, 418, 571, 822, 844
Sau96I GGNCC 4 cut(s) 434, 493, 903, 904
ScaI AGTACT 1 cut(s) 27
SchI GAGTC 2 cut(s) 833, 1020
ScrFI CCNGG 5 cut(s) 214, 908, 986, 1236, 1244
SduI GDGCHC 1 cut(s) 907
SfaNI GCATC 4 cut(s) 30, 844, 902, 1119
SfuI TTCGAA 1 cut(s) 636
SinI GGWCC 1 cut(s) 493
SmiMI CAYNNNNRTG 3 cut(s) 204, 301, 875
SmlI CTYRAG 1 cut(s) 29
SmoI CTYRAG 1 cut(s) 29
SpeI ACTAGT 1 cut(s) 170
SsiI CCGC 4 cut(s) 147, 496, 620, 631
SspMI CTAG 4 cut(s) 138, 171, 663, 936
StyD4I CCNGG 5 cut(s) 212, 906, 984, 1234, 1242
StyI CCWWGG 3 cut(s) 296, 430, 502
TaaI ACNGT 3 cut(s) 154, 274, 1049
TaqI TCGA 4 cut(s) 10, 636, 1003, 1087
TaqII GACCGA 1 cut(s) 1084
TatI WGTACW 2 cut(s) 25, 267
TauI GCSGC 1 cut(s) 150
TfiI GAWTC 4 cut(s) 20, 400, 803, 1018
Tru1I TTAA 6 cut(s) 156, 237, 378, 468, 480, 966
Tru9I TTAA 6 cut(s) 156, 237, 378, 468, 480, 966
TscAI CASTG 2 cut(s) 877, 1052
TseFI GTSAC 4 cut(s) 363, 959, 1043, 1164
TseI GCWGC 1 cut(s) 334
Tsp45I GTSAC 4 cut(s) 363, 959, 1043, 1164
TspDTI ATGAA 3 cut(s) 172, 354, 1124
TspGWI ACGGA 1 cut(s) 620
TspRI CASTG 2 cut(s) 877, 1052
Van91I CCANNNNNTGG 1 cut(s) 791
VpaK11BI GGWCC 1 cut(s) 493
VspI ATTAAT 1 cut(s) 378
XapI RAATTY 4 cut(s) 193, 324, 787, 1175
XceI RCATGY 2 cut(s) 467, 1086
XcmI CCANNNNNNNNNTGG 2 cut(s) 610, 1037
XmiI GTMKAC 2 cut(s) 1003, 1087
XspI CTAG 4 cut(s) 138, 171, 663, 936
ZrmI AGTACT 1 cut(s) 27
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.