Rmu_ssc0000372.1_g000018

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000372.1
OG0000147
Physical Location & Seq
Forward (+)
59498 .. 62103
2606 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000372.1_g000018.1.cds

Sequence Viewer

Length: 2022 bp
atggcttcacatgaccatcttgcagcaagattggagaacacttgtcacattgacgaggttcaagacacagtgtctcttttgggagctcacattgttgatgtcatgcccaacattggtggcataaagggggcgatcaggttagcgtggaaggactttggtcctctccagattgttcacctaaaggggaatctcttctccattagggtttcagctgaggcctcaatgaagattacggagggaggtctctggaatattgaaaaccttcgtttcaatgtcatcagatggcttcctaccgggtacatcaatgatgctcctctacatctcatttcattctgggtccagatttctggcctcacttatgaaaaaatgaacgctgagaattctcgactcataggctttgagatcggggatgtgttacaagttgaggatatttgtgatgcagatgccacccttcggggttatctcagagttaaaccaggtgaagaaagaccggagaatgtttggtatggctcttggatgaaaaggaaaatccggcaaactcttcatccgttcgactttggaatgcccaccaaaaggcaatggcaccgccctagttccaggaaattcatgggtagggaaaatctctcttcgagatcccctactgattgtgaccggtctacaacgtcgtctatgttgaagcatcttcccttgcccgacgtgccagaccctgatggtgactatccaggtataagttcaaatttgaatcagtccgctgacactcctaccatcctatgccctaccaccctgaccaaggcctcacccttcttctctccctgtgaccacatggagaacccaaaggtgacagctttcccaagccctagctggttaaaggtagctgtcactaccactagaacccatgttagctgggctgagaaaaactctaggcctaatcctccaaagagccttaaaaggaaaatccctacaccaaacccaaacaactacaggtccaaaaacttgttaacccggattgatgatgccttgttttctcccaacataagcccatccttgacccaaacaacaaactacactctttgcccaaatctggcccttgccactgctccagccttgcatatcccaaaaacttttcaacgtgtcaaaccaccatcaaaagggaaagaacctctcctctccttgcctggttcccacaacaaaaaaacacttgcttgcttaacacaaaaagacccatctcgaaaaccaattttgaattctctccccgccatcaaaaagccagacttgtctctactcctggtgatggtagttcaagtcaatctgttctccctcagccggtcctgggtgggggtggcctcgaaagatataggagaactggtcctaggcacaggacaaatgaagcagcgagtggctgatcttgcaatcgaagtgacagagcatttgggtaccatcgtgcttccaggaagagaagggtgggtaagttccctgaccccagtctcaatttggggcaatcccctctccagggcggtggtgactggccgacagtcacaagtccccaatgagtacactactctcttggaactgtcagggtttagggaaggccttgacagtccaaaaattgggggacctcataaaggaaactcggtccctccggtcgggactgctggtggccttgccctctggtggcggcaggatgttaaggctgtccctcctcagccttggatttgtattggtgacctaaatgagttgttttcgaatgacgagaaggaaggtggtatccctcttccttggaataggcctcggttcctgcaagatttcatgaactcgaattctctctttgatcttggtttttgtggccccaagtttacctgggagaacaagagagatgatggcctgatcttagagcgtttagacagggctatgggaaattccgactggcttcaagccctgcctgactcaaaaattacccatttagctcgcaccagatctgatcactgtccccttcttgtttccttcaaacctcctggtccctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 Exo_endo_phos_2 RNase_H RVT_1 zf-CCHC_4

Protein Analysis

673

Amino Acids

74.75

Weight (kDa)

9.11

Isoelectric Point (pI)

48.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000147)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10354 FvH4_1g17131 FvH4_2g11611 FvH4_2g33851 FvH4_3g32112 FvH4_3g35052 FvH4_3g44611 FvH4_4g05921 FvH4_4g06411 FvH4_4g06792 FvH4_4g10365 FvH4_4g21422 FvH4_4g22401 FvH4_4g30261 FvH4_5g08843 FvH4_5g14731 FvH4_5g24781 FvH4_5g26231 FvH4_5g31282 FvH4_6g23371 FvH4_6g38511 FvH4_7g01171 FvH4_7g03341 FvH4_7g06171 FvH4_7g32472
prunus_persica Prupe.2G036900_v2.0.a1
pyrus_communis pycom02g19900 pycom03g01520 pycom05g10510 pycom16g23820
rosa_chinensis RchiOBHm_Chr1g0316031 RchiOBHm_Chr1g0342451 RchiOBHm_Chr1g0344541 RchiOBHm_Chr1g0364721 RchiOBHm_Chr2g0133541 RchiOBHm_Chr2g0134511 RchiOBHm_Chr2g0145891 RchiOBHm_Chr2g0163241 RchiOBHm_Chr5g0027201 RchiOBHm_Chr5g0027881 RchiOBHm_Chr5g0047471 RchiOBHm_Chr7g0210901
rosa_laevigata RLG00000011116 RLG00000017964 RLG00000018128 RLG00000018387 RLG00000018829 RLG00000019353 RLG00000028973 RLG00000035870 RLG00000036629
rosa_multiflora Rmu_co8126340.1_g000001 Rmu_co8216750.1_g000001 Rmu_co8222072.1_g000001 Rmu_co8332453.1_g000001 Rmu_co8349913.1_g000001 Rmu_co8405337.1_g000001 Rmu_sc0000041.1_g000012 Rmu_sc0000166.1_g000029 Rmu_sc0000251.1_g000019 Rmu_sc0000271.1_g000028 Rmu_sc0000509.1_g000036 Rmu_sc0000543.1_g000048 Rmu_sc0000808.1_g000003 Rmu_sc0000847.1_g000040 Rmu_sc0000972.1_g000020 Rmu_sc0001260.1_g000001 Rmu_sc0001464.1_g000026 Rmu_sc0001616.1_g000003 Rmu_sc0001669.1_g000001 Rmu_sc0002005.1_g000001 Rmu_sc0002014.1_g000010 Rmu_sc0002082.1_g000033 Rmu_sc0002302.1_g000024 Rmu_sc0002531.1_g000045 Rmu_sc0003276.1_g000002 Rmu_sc0003737.1_g000007 Rmu_sc0003832.1_g000022 Rmu_sc0004080.1_g000011 Rmu_sc0004487.1_g000009 Rmu_sc0004988.1_g000018 Rmu_sc0004988.1_g000019 Rmu_sc0005254.1_g000002 Rmu_sc0005733.1_g000004 Rmu_sc0006413.1_g000006 Rmu_sc0007121.1_g000013 Rmu_sc0007869.1_g000006 Rmu_sc0008035.1_g000015 Rmu_sc0008279.1_g000017 Rmu_sc0008351.1_g000014 Rmu_sc0008957.1_g000007 Rmu_sc0009012.1_g000007 Rmu_sc0010556.1_g000009 Rmu_sc0012889.1_g000003 Rmu_sc0019808.1_g000004 Rmu_sc0028113.1_g000001 Rmu_sc0031202.1_g000001 Rmu_sc0034436.1_g000001 Rmu_sc0034445.1_g000001 Rmu_sc0040044.1_g000001 Rmu_ssc0000062.1_g000032 Rmu_ssc0000372.1_g000018
rosa_roxburghii Rroxscaffold_1G00001520 Rroxscaffold_1G00039990 Rroxscaffold_1G00046370 Rroxscaffold_2G00110140 Rroxscaffold_2G00131420 Rroxscaffold_3G00222390 Rroxscaffold_5G00336040 Rroxscaffold_5G00338000 Rroxscaffold_5G00344030 Rroxscaffold_5G00363460 Rroxscaffold_6G00402000 Rroxscaffold_7G00194940
rosa_rugosa Rorug01G0106500 Rorug01G0111300 Rorug01G0247000 Rorug02G0318100.1 Rorug02G0318200 Rorug02G0459500 Rorug03G0108100 Rorug03G0200500 Rorug03G0232500 Rorug03G0240600 Rorug04G0105300 Rorug04G0256600 Rorug06G0079300 Rorug06G0082700 Rorug06G0095600 Rorug06G0179000 Rorug07G0113500 Rorug07G0271100
rosa_samantha Rh1AG087200 Rh1CG085300 Rh1DG013200 Rh1DG091700 Rh1DG091800 Rh1DG338300 Rh2AG375400 Rh2AG407000 Rh2AG513500 Rh2BG277700 Rh2BG371200 Rh2BG376100 Rh2BG580500 Rh2CG354300 Rh2DG200100 Rh2DG388000 Rh2DG393500 Rh2DG426400 Rh3CG304800 Rh4AG044600 Rh4AG220500 Rh4BG379300 Rh4CG007100 Rh4CG030300 Rh4CG038000 Rh4CG114900 Rh4CG393700 Rh5AG124900 Rh5AG342300 Rh5BG414400 Rh5CG263800 Rh5CG439000 Rh5DG231100 Rh5DG566900 Rh6AG138600 Rh6AG200000 Rh6AG253100 Rh6AG390900 Rh6AG441600 Rh6BG194700 Rh6BG225800 Rh6BG256100 Rh6CG231700 Rh6CG231900 Rh6CG312200 Rh6CG453700 Rh6DG219400 Rh7AG357700 Rh7AG442000 Rh7CG425700 Rh7CG474600 Rh7CG494100 Rh7DG253900 Rh7DG294700 Rh7DG401600 Rh7DG461300
rosa_wichuraiana Rw1G001190 Rw2G047020 Rw4G003490 Rw5G039690 Rw6G010450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1433
AccB1I GGYRCC 2 cut(s) 582, 1433
AccB7I CCANNNNNTGG 1 cut(s) 1607
AccI GTMKAC 1 cut(s) 656
AciI CCGC 5 cut(s) 586, 750, 1254, 1514, 1675
AclWI GGATC 1 cut(s) 627
AcoI YGGCCR 1 cut(s) 1525
AcsI RAATTY 6 cut(s) 379, 602, 736, 1243, 1816, 1915
AfaI GTAC 3 cut(s) 299, 1435, 1553
AflIII ACRYGT 1 cut(s) 1129
AgeI ACCGGT 1 cut(s) 651
AhdI GACNNNNNGTC 1 cut(s) 70
AjiI CACGTC 1 cut(s) 697
AjuI GAANNNNNNNTTGG 2 cut(s) 1228, 1260
AluBI AGCT 7 cut(s) 86, 212, 845, 861, 875, 903, 1964
AluI AGCT 7 cut(s) 86, 212, 845, 861, 875, 903, 1964
Alw21I GWGCWC 1 cut(s) 88
Alw26I GTCTC 4 cut(s) 78, 248, 1281, 1489
AlwI GGATC 1 cut(s) 627
AlwNI CAGNNNCTG 1 cut(s) 707
ApeKI GCWGC 2 cut(s) 23, 1390
ApoI RAATTY 6 cut(s) 379, 602, 736, 1243, 1816, 1915
ArsI GACNNNNNNTTYG 2 cut(s) 1411, 1443
AsiGI ACCGGT 1 cut(s) 651
Asp700I GAANNNNTTC 2 cut(s) 191, 261
Asp718I GGTACC 1 cut(s) 1433
AspA2I CCTAGG 1 cut(s) 1369
AsuC2I CCSGG 2 cut(s) 295, 1003
AsuHPI GGTGA 8 cut(s) 167, 491, 725, 789, 850, 1300, 1531, 1733
AsuII TTCGAA 1 cut(s) 1742
AvaII GGWCC 8 cut(s) 158, 337, 984, 1326, 1366, 1613, 1633, 2015
AvrII CCTAGG 1 cut(s) 1369
BaeI ACNNNNGTAYC 2 cut(s) 1425, 1458
BanI GGYRCC 2 cut(s) 582, 1433
BanII GRGCYC 1 cut(s) 88
Bbv12I GWGCWC 1 cut(s) 88
BbvCI CCTCAGC 3 cut(s) 213, 1319, 1701
BbvI GCAGC 2 cut(s) 35, 1402
BciVI GTATCC 1 cut(s) 1775
BclI TGATCA 1 cut(s) 1978
BcnI CCSGG 2 cut(s) 295, 1003
BcoDI GTCTC 4 cut(s) 78, 248, 1281, 1489
BfaI CTAG 5 cut(s) 591, 858, 888, 921, 1370
BfmI CTRYAG 1 cut(s) 979
BfuI GTATCC 1 cut(s) 1775
BglII AGATCT 1 cut(s) 1973
BisI GCNGC 3 cut(s) 24, 1391, 1676
BlnI CCTAGG 1 cut(s) 1369
BlsI GCNGC 3 cut(s) 25, 1392, 1677
Bme18I GGWCC 8 cut(s) 158, 337, 984, 1326, 1366, 1613, 1633, 2015
BmeRI GACNNNNNGTC 1 cut(s) 70
BmgBI CACGTC 1 cut(s) 697
BmiI GGNNCC 9 cut(s) 338, 584, 1180, 1435, 1614, 1635, 1793, 1846, 2017
BmrI ACTGGG 1 cut(s) 1475
BmsI GCATC 5 cut(s) 298, 427, 433, 688, 1003
BmuI ACTGGG 1 cut(s) 1475
BoxI GACNNNNGTC 2 cut(s) 156, 1481
BplI GAGNNNNNCTC 2 cut(s) 902, 934
BpmI CTGGAG 3 cut(s) 149, 1083, 1492
Bpu10I CCTNAGC 3 cut(s) 213, 1319, 1701
Bpu14I TTCGAA 1 cut(s) 1742
BpuMI CCSGG 2 cut(s) 295, 1003
BsaI GGTCTC 1 cut(s) 248
BsaJI CCNNGG 8 cut(s) 789, 1329, 1369, 1509, 1706, 1775, 1787, 1857
BsaWI WCCGGW 3 cut(s) 490, 651, 1639
BsaXI ACNNNNNCTCC 2 cut(s) 1350, 1380
Bse118I RCCGGY 2 cut(s) 651, 1323
Bse1I ACTGG 4 cut(s) 1368, 1481, 1528, 1928
Bse3DI GCAATG 1 cut(s) 584
BseDI CCNNGG 8 cut(s) 789, 1329, 1369, 1509, 1706, 1775, 1787, 1857
BseGI GGATG 6 cut(s) 415, 522, 544, 765, 1040, 1687
BseMI GCAATG 1 cut(s) 584
BseMII CTCAG 6 cut(s) 204, 366, 478, 900, 1333, 1715
BseNI ACTGG 4 cut(s) 1368, 1481, 1528, 1928
BseRI GAGGAG 3 cut(s) 303, 1154, 1689
BseXI GCAGC 2 cut(s) 35, 1402
BseYI CCCAGC 1 cut(s) 903
Bsh1285I CGRYCG 1 cut(s) 1644
BshNI GGYRCC 2 cut(s) 582, 1433
BshTI ACCGGT 1 cut(s) 651
BsiEI CGRYCG 1 cut(s) 1644
BsiHKAI GWGCWC 1 cut(s) 88
BsiSI CCGG 7 cut(s) 294, 491, 532, 652, 1003, 1324, 1640
BslFI GGGAC 7 cut(s) 1526, 1619, 1626, 1660, 1679, 1971, 2001
BsmAI GTCTC 4 cut(s) 78, 248, 1281, 1489
BsmFI GGGAC 7 cut(s) 1526, 1619, 1626, 1660, 1679, 1971, 2001
BsmI GAATGC 1 cut(s) 567
Bso31I GGTCTC 1 cut(s) 248
Bsp119I TTCGAA 1 cut(s) 1742
Bsp1286I GDGCHC 1 cut(s) 88
Bsp143I GATC 8 cut(s) 132, 402, 632, 1402, 1828, 1884, 1973, 1978
BspACI CCGC 5 cut(s) 586, 750, 1254, 1514, 1675
BspCNI CTCAG 6 cut(s) 205, 367, 477, 901, 1332, 1714
BspHI TCATGA 1 cut(s) 1806
BspLI GGNNCC 9 cut(s) 338, 584, 1180, 1435, 1614, 1635, 1793, 1846, 2017
BspPI GGATC 1 cut(s) 627
BspT104I TTCGAA 1 cut(s) 1742
BspT107I GGYRCC 2 cut(s) 582, 1433
BspTNI GGTCTC 1 cut(s) 248
BsrDI GCAATG 1 cut(s) 584
BsrFI RCCGGY 2 cut(s) 651, 1323
BsrI ACTGG 4 cut(s) 1368, 1481, 1528, 1928
BssAI RCCGGY 2 cut(s) 651, 1323
BssECI CCNNGG 8 cut(s) 789, 1329, 1369, 1509, 1706, 1775, 1787, 1857
BssMI GATC 8 cut(s) 132, 402, 632, 1402, 1828, 1884, 1973, 1978
BssT1I CCWWGG 4 cut(s) 789, 1369, 1706, 1775
Bst4CI ACNGT 5 cut(s) 70, 1533, 1572, 1598, 1985
Bst6I CTCTTC 5 cut(s) 197, 546, 631, 1447, 1776
BstBI TTCGAA 1 cut(s) 1742
BstC8I GCNNGC 2 cut(s) 1204, 1966
BstDEI CTNAG 7 cut(s) 213, 375, 464, 909, 1319, 1701, 1888
BstEII GGTNACC 1 cut(s) 1721
BstENI CCTNNNNNAGG 2 cut(s) 788, 1620
BstF5I GGATG 6 cut(s) 415, 522, 544, 765, 1040, 1687
BstKTI GATC 8 cut(s) 135, 405, 635, 1405, 1831, 1887, 1976, 1981
BstMAI GTCTC 4 cut(s) 78, 248, 1281, 1489
BstMBI GATC 8 cut(s) 132, 402, 632, 1402, 1828, 1884, 1973, 1978
BstMCI CGRYCG 1 cut(s) 1644
BstMWI GCNNNNNNNGC 2 cut(s) 697, 1406
BstPAI GACNNNNGTC 2 cut(s) 156, 1481
BstPI GGTNACC 1 cut(s) 1721
BstSFI CTRYAG 1 cut(s) 979
BstV1I GCAGC 2 cut(s) 35, 1402
BstX2I RGATCY 2 cut(s) 632, 1973
BstXI CCANNNNNNTGG 2 cut(s) 347, 1516
BstYI RGATCY 2 cut(s) 632, 1973
BsuI GTATCC 1 cut(s) 1775
BtrI CACGTC 1 cut(s) 697
BtsCI GGATG 6 cut(s) 415, 522, 544, 765, 1040, 1687
BtsI GCAGTG 1 cut(s) 1092
BtsIMutI CAGTG 3 cut(s) 75, 1092, 1981
Cac8I GCNNGC 2 cut(s) 1204, 1966
CaiI CAGNNNCTG 1 cut(s) 707
CciI TCATGA 1 cut(s) 1806
Cfr10I RCCGGY 2 cut(s) 651, 1323
CsiI ACCWGGT 1 cut(s) 475
Csp6I GTAC 3 cut(s) 298, 1434, 1552
CspAI ACCGGT 1 cut(s) 651
CspCI CAANNNNNGTGG 2 cut(s) 97, 132
CviAII CATG 6 cut(s) 11, 103, 607, 823, 896, 1807
CviQI GTAC 3 cut(s) 298, 1434, 1552
DdeI CTNAG 7 cut(s) 213, 375, 464, 909, 1319, 1701, 1888
DpnI GATC 8 cut(s) 134, 404, 634, 1404, 1830, 1886, 1975, 1980
DpnII GATC 8 cut(s) 132, 402, 632, 1402, 1828, 1884, 1973, 1978
DriI GACNNNNNGTC 1 cut(s) 70
EaeI YGGCCR 1 cut(s) 1525
Eam1104I CTCTTC 5 cut(s) 197, 546, 631, 1447, 1776
Eam1105I GACNNNNNGTC 1 cut(s) 70
EarI CTCTTC 5 cut(s) 197, 546, 631, 1447, 1776
Ecl136II GAGCTC 1 cut(s) 86
Eco130I CCWWGG 4 cut(s) 789, 1369, 1706, 1775
Eco147I AGGCCT 5 cut(s) 218, 794, 925, 1590, 1786
Eco24I GRGCYC 1 cut(s) 88
Eco31I GGTCTC 1 cut(s) 248
Eco47I GGWCC 8 cut(s) 158, 337, 984, 1326, 1366, 1613, 1633, 2015
Eco53kI GAGCTC 1 cut(s) 86
Eco91I GGTNACC 1 cut(s) 1721
EcoICRI GAGCTC 1 cut(s) 86
EcoNI CCTNNNNNAGG 2 cut(s) 788, 1620
EcoO109I RGGNCCY 1 cut(s) 1613
EcoO65I GGTNACC 1 cut(s) 1721
EcoRI GAATTC 3 cut(s) 379, 1243, 1816
EcoT14I CCWWGG 4 cut(s) 789, 1369, 1706, 1775
EcoT38I GRGCYC 1 cut(s) 88
ErhI CCWWGG 4 cut(s) 789, 1369, 1706, 1775
FaeI CATG 6 cut(s) 14, 106, 610, 826, 899, 1810
FalI AAGNNNNNCTT 2 cut(s) 1256, 1288
FaqI GGGAC 7 cut(s) 1526, 1619, 1626, 1660, 1679, 1971, 2001
FatI CATG 6 cut(s) 10, 102, 606, 822, 895, 1806
FauI CCCGC 1 cut(s) 1261
FbaI TGATCA 1 cut(s) 1978
FblI GTMKAC 1 cut(s) 656
Fnu4HI GCNGC 3 cut(s) 24, 1391, 1676
FokI GGATG 6 cut(s) 422, 529, 531, 752, 1027, 1694
FriOI GRGCYC 1 cut(s) 88
Fsp4HI GCNGC 3 cut(s) 24, 1391, 1676
FspBI CTAG 5 cut(s) 591, 858, 888, 921, 1370
GluI GCNGC 3 cut(s) 24, 1391, 1676
GsaI CCCAGC 1 cut(s) 907
GsuI CTGGAG 3 cut(s) 149, 1083, 1492
HapII CCGG 7 cut(s) 294, 491, 532, 652, 1003, 1324, 1640
Hin1II CATG 6 cut(s) 14, 106, 610, 826, 899, 1810
HincII GTYRAC 1 cut(s) 999
HindII GTYRAC 1 cut(s) 999
HinfI GANTC 4 cut(s) 187, 387, 742, 1943
HpaI GTTAAC 1 cut(s) 999
HpaII CCGG 7 cut(s) 294, 491, 532, 652, 1003, 1324, 1640
HphI GGTGA 8 cut(s) 167, 491, 725, 789, 850, 1300, 1531, 1733
Hpy166II GTNNAC 5 cut(s) 175, 657, 999, 1554, 1854
Hpy188I TCNGA 4 cut(s) 281, 467, 1921, 1978
Hpy188III TCNNGA 9 cut(s) 62, 166, 247, 340, 384, 630, 1227, 1645, 1807
Hpy8I GTNNAC 5 cut(s) 175, 657, 999, 1554, 1854
Hpy99I CGWCG 2 cut(s) 667, 698
HpyCH4III ACNGT 5 cut(s) 70, 1533, 1572, 1598, 1985
HpyCH4IV ACGT 3 cut(s) 662, 696, 1129
HpyCH4V TGCA 5 cut(s) 23, 440, 1108, 1409, 1798
HpyF10VI GCNNNNNNNGC 2 cut(s) 697, 1406
HpyF3I CTNAG 7 cut(s) 213, 375, 464, 909, 1319, 1701, 1888
HpySE526I ACGT 3 cut(s) 662, 696, 1129
Hsp92II CATG 6 cut(s) 14, 106, 610, 826, 899, 1810
KpnI GGTACC 1 cut(s) 1437
Ksp22I TGATCA 1 cut(s) 1978
KspAI GTTAAC 1 cut(s) 999
Kzo9I GATC 8 cut(s) 132, 402, 632, 1402, 1828, 1884, 1973, 1978
LmnI GCTCC 3 cut(s) 83, 316, 1102
Lsp1109I GCAGC 2 cut(s) 35, 1402
LweI GCATC 5 cut(s) 298, 427, 433, 688, 1003
MabI ACCWGGT 1 cut(s) 475
MaeI CTAG 5 cut(s) 591, 858, 888, 921, 1370
MaeII ACGT 3 cut(s) 662, 696, 1129
MalI GATC 8 cut(s) 134, 404, 634, 1404, 1830, 1886, 1975, 1980
MboI GATC 8 cut(s) 132, 402, 632, 1402, 1828, 1884, 1973, 1978
MboII GAAGA 9 cut(s) 184, 238, 494, 533, 618, 674, 796, 1464, 1763
MflI RGATCY 2 cut(s) 632, 1973
MhlI GDGCHC 1 cut(s) 88
MlyI GAGTC 2 cut(s) 381, 1937
MmeI TCCRAC 1 cut(s) 1944
MroXI GAANNNNTTC 2 cut(s) 191, 261
MseI TTAA 6 cut(s) 471, 866, 945, 998, 1208, 1686
MspA1I CMGCKG 2 cut(s) 212, 752
MspI CCGG 7 cut(s) 294, 491, 532, 652, 1003, 1324, 1640
Mva1269I GAATGC 1 cut(s) 567
MwoI GCNNNNNNNGC 2 cut(s) 697, 1406
NciI CCSGG 2 cut(s) 295, 1003
NdeII GATC 8 cut(s) 132, 402, 632, 1402, 1828, 1884, 1973, 1978
NlaIII CATG 6 cut(s) 14, 106, 610, 826, 899, 1810
NlaIV GGNNCC 9 cut(s) 338, 584, 1180, 1435, 1614, 1635, 1793, 1846, 2017
NspV TTCGAA 1 cut(s) 1742
PagI TCATGA 1 cut(s) 1806
PceI AGGCCT 5 cut(s) 218, 794, 925, 1590, 1786
PctI GAATGC 1 cut(s) 567
PdmI GAANNNNTTC 2 cut(s) 191, 261
PfeI GAWTC 2 cut(s) 187, 742
PflMI CCANNNNNTGG 1 cut(s) 1607
PfoI TCCNGGA 2 cut(s) 596, 1447
PinAI ACCGGT 1 cut(s) 651
PkrI GCNGC 3 cut(s) 25, 1392, 1677
PleI GAGTC 2 cut(s) 381, 1937
PpsI GAGTC 2 cut(s) 381, 1937
PpuMI RGGWCCY 1 cut(s) 1613
PshAI GACNNNNGTC 2 cut(s) 156, 1481
Psp124BI GAGCTC 1 cut(s) 88
Psp5II RGGWCCY 1 cut(s) 1613
PspEI GGTNACC 1 cut(s) 1721
PspFI CCCAGC 1 cut(s) 903
PspN4I GGNNCC 9 cut(s) 338, 584, 1180, 1435, 1614, 1635, 1793, 1846, 2017
PspPPI RGGWCCY 1 cut(s) 1613
PstNI CAGNNNCTG 1 cut(s) 707
PsuI RGATCY 2 cut(s) 632, 1973
PvuII CAGCTG 1 cut(s) 212
RsaI GTAC 3 cut(s) 299, 1435, 1553
RsaNI GTAC 3 cut(s) 298, 1434, 1552
SacI GAGCTC 1 cut(s) 88
SaqAI TTAA 6 cut(s) 471, 866, 945, 998, 1208, 1686
SatI GCNGC 3 cut(s) 24, 1391, 1676
Sau3AI GATC 8 cut(s) 132, 402, 632, 1402, 1828, 1884, 1973, 1978
SchI GAGTC 2 cut(s) 381, 1937
SduI GDGCHC 1 cut(s) 88
SexAI ACCWGGT 1 cut(s) 475
SfaNI GCATC 5 cut(s) 298, 427, 433, 688, 1003
SfcI CTRYAG 1 cut(s) 979
SfuI TTCGAA 1 cut(s) 1742
SinI GGWCC 8 cut(s) 158, 337, 984, 1326, 1366, 1613, 1633, 2015
SseBI AGGCCT 5 cut(s) 218, 794, 925, 1590, 1786
SsiI CCGC 5 cut(s) 586, 750, 1254, 1514, 1675
SspI AATATT 1 cut(s) 253
SspMI CTAG 5 cut(s) 591, 858, 888, 921, 1370
SstI GAGCTC 1 cut(s) 88
StuI AGGCCT 5 cut(s) 218, 794, 925, 1590, 1786
StyI CCWWGG 4 cut(s) 789, 1369, 1706, 1775
TaaI ACNGT 5 cut(s) 70, 1533, 1572, 1598, 1985
TaiI ACGT 3 cut(s) 665, 699, 1132
TaqI TCGA 8 cut(s) 385, 552, 629, 1228, 1346, 1413, 1742, 1814
TaqII GACCGA 1 cut(s) 1621
TatI WGTACW 1 cut(s) 1551
TauI GCSGC 1 cut(s) 1678
TfiI GAWTC 2 cut(s) 187, 742
Tru1I TTAA 6 cut(s) 471, 866, 945, 998, 1208, 1686
Tru9I TTAA 6 cut(s) 471, 866, 945, 998, 1208, 1686
TscAI CASTG 3 cut(s) 75, 1099, 1988
TseI GCWGC 2 cut(s) 23, 1390
TspGWI ACGGA 2 cut(s) 248, 537
TspRI CASTG 3 cut(s) 75, 1099, 1988
Van91I CCANNNNNTGG 1 cut(s) 1607
VpaK11BI GGWCC 8 cut(s) 158, 337, 984, 1326, 1366, 1613, 1633, 2015
XagI CCTNNNNNAGG 2 cut(s) 788, 1620
XapI RAATTY 6 cut(s) 379, 602, 736, 1243, 1816, 1915
XcmI CCANNNNNNNNNTGG 3 cut(s) 604, 858, 1488
XmaJI CCTAGG 1 cut(s) 1369
XmiI GTMKAC 1 cut(s) 656
XmnI GAANNNNTTC 2 cut(s) 191, 261
XspI CTAG 5 cut(s) 591, 858, 888, 921, 1370
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.