Rmu_sc0034445.1_g000001

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0034445.1
OG0000147
Physical Location & Seq
Reverse (-)
2 .. 2013
2012 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0034445.1_g000001.1.cds

Sequence Viewer

Length: 1428 bp
acttccctatacccatttgctctgataatttagatgggcctgccttgtcccctgtcaaagcaaacaatgtgttgttagttgagttgcccatcagtacttcagaggaccactgtgcagcccagcctcctcctgtaaaaagaaaaagacaatcaaaaaagaaagatgaaacaatagaggtggggacaaagaaacctagagtacccattagtcccagtcttcgtttgtcttctggaagtggaagagctaggggaagaggcagaggaggtaaaactggaagaggaaggggaaaatccgtgcttatctcggagtctcccctagttgatgtggcaggtagaggggagcctttgacaagtgtatctactgcccagaatgatgatgtctctcttactgtccctttgattatggctaaaggattggggaagaccttgacagttcagactctccgggagatcacacactcccattgccctgattttgtttttatttctgaaacacatcaatgtagtagctatgttaacaatgtacgaaaccaattaggcttcgaaaatggttttaatgtcgaccctatcaataaggcaggtggacttacactttggtggaaatctgattttgtagtggaggttgtagatttttctaagcactttattgatacttggatcactcttcctagtaccatgacaaaggttcgggtctcttggctgtatggtcctccctatgtaacagaaaaggcagatttttggagtagatggattaatcaaaggcgaggagttgacacatgtcttacccacctcacccgtgtagggtctgatcataaccttatcgtcctaagcactggaccaaatttggagagacacatgcccagctttaaatttgagtctttttgggtagatgataaggattgtgcccctataattgaggataattggttgtcagatactacggtcccaagtgtcacaaactggtccaataacctcaaaaggtgcagggtccacttaaggaattggagtaagaaaaagttcccgaagtgtaacaaagtggaaataaagaagtgtctagctgaccttgaagactgtcagcgtcttcatccttttgatagttcggagcagcagctagagatctctgcaaaacttgtcttttctggggtgtctcctatggttactgtcgagatgaataattcgctcttggcccctgtttctctgttggaagtaagggatgctgctcaccaattgggagctctaaaagccccgggaccagatggtttccttggcttattttatcagaagtattggggaatagttaagcaagtgatttgggatactgctagggacttccaaaagggagcaatgaagctgagggggctcaactcaacacatattgtcctcatccccaagatcccaaacccagagcgaacatcacaattccggccta
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

475

Amino Acids

53.06

Weight (kDa)

9.29

Isoelectric Point (pI)

34.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000147)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10354 FvH4_1g17131 FvH4_2g11611 FvH4_2g33851 FvH4_3g32112 FvH4_3g35052 FvH4_3g44611 FvH4_4g05921 FvH4_4g06411 FvH4_4g06792 FvH4_4g10365 FvH4_4g21422 FvH4_4g22401 FvH4_4g30261 FvH4_5g08843 FvH4_5g14731 FvH4_5g24781 FvH4_5g26231 FvH4_5g31282 FvH4_6g23371 FvH4_6g38511 FvH4_7g01171 FvH4_7g03341 FvH4_7g06171 FvH4_7g32472
prunus_persica Prupe.2G036900_v2.0.a1
pyrus_communis pycom02g19900 pycom03g01520 pycom05g10510 pycom16g23820
rosa_chinensis RchiOBHm_Chr1g0316031 RchiOBHm_Chr1g0342451 RchiOBHm_Chr1g0344541 RchiOBHm_Chr1g0364721 RchiOBHm_Chr2g0133541 RchiOBHm_Chr2g0134511 RchiOBHm_Chr2g0145891 RchiOBHm_Chr2g0163241 RchiOBHm_Chr5g0027201 RchiOBHm_Chr5g0027881 RchiOBHm_Chr5g0047471 RchiOBHm_Chr7g0210901
rosa_laevigata RLG00000011116 RLG00000017964 RLG00000018128 RLG00000018387 RLG00000018829 RLG00000019353 RLG00000028973 RLG00000035870 RLG00000036629
rosa_multiflora Rmu_co8126340.1_g000001 Rmu_co8216750.1_g000001 Rmu_co8222072.1_g000001 Rmu_co8332453.1_g000001 Rmu_co8349913.1_g000001 Rmu_co8405337.1_g000001 Rmu_sc0000041.1_g000012 Rmu_sc0000166.1_g000029 Rmu_sc0000251.1_g000019 Rmu_sc0000271.1_g000028 Rmu_sc0000509.1_g000036 Rmu_sc0000543.1_g000048 Rmu_sc0000808.1_g000003 Rmu_sc0000847.1_g000040 Rmu_sc0000972.1_g000020 Rmu_sc0001260.1_g000001 Rmu_sc0001464.1_g000026 Rmu_sc0001616.1_g000003 Rmu_sc0001669.1_g000001 Rmu_sc0002005.1_g000001 Rmu_sc0002014.1_g000010 Rmu_sc0002082.1_g000033 Rmu_sc0002302.1_g000024 Rmu_sc0002531.1_g000045 Rmu_sc0003276.1_g000002 Rmu_sc0003737.1_g000007 Rmu_sc0003832.1_g000022 Rmu_sc0004080.1_g000011 Rmu_sc0004487.1_g000009 Rmu_sc0004988.1_g000018 Rmu_sc0004988.1_g000019 Rmu_sc0005254.1_g000002 Rmu_sc0005733.1_g000004 Rmu_sc0006413.1_g000006 Rmu_sc0007121.1_g000013 Rmu_sc0007869.1_g000006 Rmu_sc0008035.1_g000015 Rmu_sc0008279.1_g000017 Rmu_sc0008351.1_g000014 Rmu_sc0008957.1_g000007 Rmu_sc0009012.1_g000007 Rmu_sc0010556.1_g000009 Rmu_sc0012889.1_g000003 Rmu_sc0019808.1_g000004 Rmu_sc0028113.1_g000001 Rmu_sc0031202.1_g000001 Rmu_sc0034436.1_g000001 Rmu_sc0034445.1_g000001 Rmu_sc0040044.1_g000001 Rmu_ssc0000062.1_g000032 Rmu_ssc0000372.1_g000018
rosa_roxburghii Rroxscaffold_1G00001520 Rroxscaffold_1G00039990 Rroxscaffold_1G00046370 Rroxscaffold_2G00110140 Rroxscaffold_2G00131420 Rroxscaffold_3G00222390 Rroxscaffold_5G00336040 Rroxscaffold_5G00338000 Rroxscaffold_5G00344030 Rroxscaffold_5G00363460 Rroxscaffold_6G00402000 Rroxscaffold_7G00194940
rosa_rugosa Rorug01G0106500 Rorug01G0111300 Rorug01G0247000 Rorug02G0318100.1 Rorug02G0318200 Rorug02G0459500 Rorug03G0108100 Rorug03G0200500 Rorug03G0232500 Rorug03G0240600 Rorug04G0105300 Rorug04G0256600 Rorug06G0079300 Rorug06G0082700 Rorug06G0095600 Rorug06G0179000 Rorug07G0113500 Rorug07G0271100
rosa_samantha Rh1AG087200 Rh1CG085300 Rh1DG013200 Rh1DG091700 Rh1DG091800 Rh1DG338300 Rh2AG375400 Rh2AG407000 Rh2AG513500 Rh2BG277700 Rh2BG371200 Rh2BG376100 Rh2BG580500 Rh2CG354300 Rh2DG200100 Rh2DG388000 Rh2DG393500 Rh2DG426400 Rh3CG304800 Rh4AG044600 Rh4AG220500 Rh4BG379300 Rh4CG007100 Rh4CG030300 Rh4CG038000 Rh4CG114900 Rh4CG393700 Rh5AG124900 Rh5AG342300 Rh5BG414400 Rh5CG263800 Rh5CG439000 Rh5DG231100 Rh5DG566900 Rh6AG138600 Rh6AG200000 Rh6AG253100 Rh6AG390900 Rh6AG441600 Rh6BG194700 Rh6BG225800 Rh6BG256100 Rh6CG231700 Rh6CG231900 Rh6CG312200 Rh6CG453700 Rh6DG219400 Rh7AG357700 Rh7AG442000 Rh7CG425700 Rh7CG474600 Rh7CG494100 Rh7DG253900 Rh7DG294700 Rh7DG401600 Rh7DG461300
rosa_wichuraiana Rw1G001190 Rw2G047020 Rw4G003490 Rw5G039690 Rw6G010450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 568
Acc36I ACCTGC 2 cut(s) 319, 568
AccI GTMKAC 1 cut(s) 560
AclWI GGATC 2 cut(s) 664, 1386
AcsI RAATTY 2 cut(s) 840, 868
AcuI CTGAAG 1 cut(s) 83
AfaI GTAC 4 cut(s) 96, 200, 524, 672
AfiI CCNNNNNNNGG 1 cut(s) 800
AflII CTTAAG 1 cut(s) 993
AflIII ACRYGT 1 cut(s) 775
AgsI TTSAA 1 cut(s) 1066
AleI CACNNNNGTG 1 cut(s) 594
AluBI AGCT 7 cut(s) 244, 509, 863, 1057, 1110, 1234, 1350
AluI AGCT 7 cut(s) 244, 509, 863, 1057, 1110, 1234, 1350
Alw21I GWGCWC 1 cut(s) 1236
Alw26I GTCTC 5 cut(s) 314, 384, 696, 843, 1151
AlwI GGATC 2 cut(s) 664, 1386
Ama87I CYCGRG 1 cut(s) 1245
AoxI GGCC 3 cut(s) 37, 1184, 1423
ApeKI GCWGC 4 cut(s) 115, 1104, 1107, 1216
ApoI RAATTY 2 cut(s) 840, 868
ArsI GACNNNNNNTTYG 2 cut(s) 575, 607
AseI ATTAAT 1 cut(s) 752
Asp700I GAANNNNTTC 1 cut(s) 1015
AspS9I GGNCC 9 cut(s) 37, 105, 706, 835, 942, 962, 987, 1185, 1249
AsuC2I CCSGG 3 cut(s) 445, 1246, 1247
AsuHPI GGTGA 2 cut(s) 783, 1213
AsuII TTCGAA 1 cut(s) 542
AvaI CYCGRG 1 cut(s) 1245
AvaII GGWCC 7 cut(s) 105, 706, 835, 942, 962, 987, 1249
BaeGI GKGCMC 1 cut(s) 906
BaeI ACNNNNGTAYC 4 cut(s) 338, 371, 926, 959
BanII GRGCYC 2 cut(s) 1236, 1361
BbsI GAAGAC 5 cut(s) 208, 218, 427, 1072, 1073
Bbv12I GWGCWC 1 cut(s) 1236
BbvCI CCTCAGC 1 cut(s) 1351
BbvI GCAGC 4 cut(s) 127, 1116, 1119, 1203
BccI CCATC 4 cut(s) 28, 97, 740, 1249
BciVI GTATCC 1 cut(s) 1308
BclI TGATCA 1 cut(s) 807
BcnI CCSGG 3 cut(s) 445, 1246, 1247
BcoDI GTCTC 5 cut(s) 314, 384, 696, 843, 1151
BfaI CTAG 7 cut(s) 194, 245, 316, 668, 1054, 1111, 1322
BfrI CTTAAG 1 cut(s) 993
BfuAI ACCTGC 2 cut(s) 319, 568
BfuI GTATCC 1 cut(s) 1308
BglII AGATCT 1 cut(s) 1115
BisI GCNGC 4 cut(s) 116, 1105, 1108, 1217
BlsI GCNGC 4 cut(s) 117, 1106, 1109, 1218
BmcAI AGTACT 1 cut(s) 96
Bme1390I CCNGG 3 cut(s) 445, 1246, 1247
Bme18I GGWCC 7 cut(s) 105, 706, 835, 942, 962, 987, 1249
BmeT110I CYCGRG 1 cut(s) 1245
BmgT120I GGNCC 9 cut(s) 37, 105, 706, 835, 942, 962, 987, 1185, 1249
BmiI GGNNCC 5 cut(s) 341, 944, 988, 1187, 1250
BmrFI CCNGG 3 cut(s) 445, 1246, 1247
BmrI ACTGGG 1 cut(s) 206
BmsI GCATC 1 cut(s) 1203
BmuI ACTGGG 1 cut(s) 206
BoxI GACNNNNGTC 1 cut(s) 776
BpiI GAAGAC 5 cut(s) 208, 218, 427, 1072, 1073
Bpu10I CCTNAGC 2 cut(s) 826, 1351
Bpu14I TTCGAA 1 cut(s) 542
BpuMI CCSGG 3 cut(s) 445, 1246, 1247
BsaI GGTCTC 1 cut(s) 696
BsaJI CCNNGG 3 cut(s) 1244, 1245, 1263
Bsc4I CCNNNNNNNGG 1 cut(s) 800
Bse1I ACTGG 4 cut(s) 212, 276, 837, 964
Bse3DI GCAATG 2 cut(s) 462, 1349
BseDI CCNNGG 3 cut(s) 1244, 1245, 1263
BseGI GGATG 3 cut(s) 1083, 1218, 1382
BseLI CCNNNNNNNGG 1 cut(s) 800
BseMI GCAATG 2 cut(s) 462, 1349
BseMII CTCAG 1 cut(s) 1342
BseNI ACTGG 4 cut(s) 212, 276, 837, 964
BseRI GAGGAG 3 cut(s) 116, 275, 779
BseSI GKGCMC 1 cut(s) 906
BseXI GCAGC 4 cut(s) 127, 1116, 1119, 1203
BseYI CCCAGC 2 cut(s) 119, 859
BsgI GTGCAG 2 cut(s) 134, 1002
BshFI GGCC 3 cut(s) 39, 1186, 1425
BsiHKAI GWGCWC 1 cut(s) 1236
BsiHKCI CYCGRG 1 cut(s) 1245
BsiSI CCGG 3 cut(s) 444, 1246, 1422
BslFI GGGAC 7 cut(s) 33, 194, 195, 376, 928, 1262, 1339
BslI CCNNNNNNNGG 1 cut(s) 800
BsmAI GTCTC 5 cut(s) 314, 384, 696, 843, 1151
BsmFI GGGAC 7 cut(s) 33, 194, 195, 376, 928, 1262, 1339
BsnI GGCC 3 cut(s) 39, 1186, 1425
Bso31I GGTCTC 1 cut(s) 696
BsoBI CYCGRG 1 cut(s) 1245
Bsp119I TTCGAA 1 cut(s) 542
Bsp1286I GDGCHC 3 cut(s) 906, 1236, 1361
Bsp143I GATC 5 cut(s) 449, 656, 807, 1115, 1391
BspANI GGCC 3 cut(s) 39, 1186, 1425
BspCNI CTCAG 1 cut(s) 1343
BspLI GGNNCC 5 cut(s) 341, 944, 988, 1187, 1250
BspMI ACCTGC 2 cut(s) 319, 568
BspPI GGATC 2 cut(s) 664, 1386
BspQI GCTCTTC 1 cut(s) 234
BspT104I TTCGAA 1 cut(s) 542
BspTI CTTAAG 1 cut(s) 993
BspTNI GGTCTC 1 cut(s) 696
BsrDI GCAATG 2 cut(s) 462, 1349
BsrI ACTGG 4 cut(s) 212, 276, 837, 964
BssECI CCNNGG 3 cut(s) 1244, 1245, 1263
BssMI GATC 5 cut(s) 449, 656, 807, 1115, 1391
BssT1I CCWWGG 1 cut(s) 1263
Bst4CI ACNGT 6 cut(s) 112, 390, 432, 942, 1072, 1161
Bst6I CTCTTC 4 cut(s) 234, 246, 270, 668
BstAFI CTTAAG 1 cut(s) 993
BstBI TTCGAA 1 cut(s) 542
BstC8I GCNNGC 1 cut(s) 41
BstDEI CTNAG 3 cut(s) 635, 826, 1351
BstF5I GGATG 3 cut(s) 1083, 1218, 1382
BstKTI GATC 5 cut(s) 452, 659, 810, 1118, 1394
BstMAI GTCTC 5 cut(s) 314, 384, 696, 843, 1151
BstMBI GATC 5 cut(s) 449, 656, 807, 1115, 1391
BstMWI GCNNNNNNNGC 2 cut(s) 1240, 1356
BstNSI RCATGY 2 cut(s) 779, 858
BstPAI GACNNNNGTC 1 cut(s) 776
BstSCI CCNGG 3 cut(s) 443, 1244, 1245
BstSLI GKGCMC 1 cut(s) 906
BstV1I GCAGC 4 cut(s) 127, 1116, 1119, 1203
BstV2I GAAGAC 5 cut(s) 208, 218, 427, 1072, 1073
BstX2I RGATCY 2 cut(s) 1115, 1391
BstYI RGATCY 2 cut(s) 1115, 1391
BsuI GTATCC 1 cut(s) 1308
BsuRI GGCC 3 cut(s) 39, 1186, 1425
BtsCI GGATG 3 cut(s) 1083, 1218, 1382
BtsIMutI CAGTG 2 cut(s) 108, 830
BveI ACCTGC 2 cut(s) 319, 568
Cac8I GCNNGC 1 cut(s) 41
Cfr13I GGNCC 9 cut(s) 37, 105, 706, 835, 942, 962, 987, 1185, 1249
Cfr9I CCCGGG 1 cut(s) 1245
CseI GACGC 1 cut(s) 1066
Csp6I GTAC 4 cut(s) 95, 199, 523, 671
CspCI CAANNNNNGTGG 2 cut(s) 158, 193
CviAII CATG 3 cut(s) 675, 776, 855
CviQI GTAC 4 cut(s) 95, 199, 523, 671
DdeI CTNAG 3 cut(s) 635, 826, 1351
DpnI GATC 5 cut(s) 451, 658, 809, 1117, 1393
DpnII GATC 5 cut(s) 449, 656, 807, 1115, 1391
DraI TTTAAA 1 cut(s) 867
Eam1104I CTCTTC 4 cut(s) 234, 246, 270, 668
EarI CTCTTC 4 cut(s) 234, 246, 270, 668
Ecl136II GAGCTC 1 cut(s) 1234
Eco130I CCWWGG 1 cut(s) 1263
Eco24I GRGCYC 2 cut(s) 1236, 1361
Eco31I GGTCTC 1 cut(s) 696
Eco47I GGWCC 7 cut(s) 105, 706, 835, 942, 962, 987, 1249
Eco53kI GAGCTC 1 cut(s) 1234
Eco57I CTGAAG 1 cut(s) 83
Eco88I CYCGRG 1 cut(s) 1245
EcoICRI GAGCTC 1 cut(s) 1234
EcoT14I CCWWGG 1 cut(s) 1263
EcoT38I GRGCYC 2 cut(s) 1236, 1361
ErhI CCWWGG 1 cut(s) 1263
FaeI CATG 3 cut(s) 678, 779, 858
FaqI GGGAC 7 cut(s) 33, 194, 195, 376, 928, 1262, 1339
FatI CATG 3 cut(s) 674, 775, 854
FbaI TGATCA 1 cut(s) 807
FblI GTMKAC 1 cut(s) 560
Fnu4HI GCNGC 4 cut(s) 116, 1105, 1108, 1217
FokI GGATG 3 cut(s) 1070, 1225, 1369
FriOI GRGCYC 2 cut(s) 1236, 1361
Fsp4HI GCNGC 4 cut(s) 116, 1105, 1108, 1217
FspBI CTAG 7 cut(s) 194, 245, 316, 668, 1054, 1111, 1322
GluI GCNGC 4 cut(s) 116, 1105, 1108, 1217
GsaI CCCAGC 2 cut(s) 123, 863
HaeIII GGCC 3 cut(s) 39, 1186, 1425
HapII CCGG 3 cut(s) 444, 1246, 1422
HgaI GACGC 1 cut(s) 1066
Hin1II CATG 3 cut(s) 678, 779, 858
HincII GTYRAC 3 cut(s) 516, 561, 771
HindII GTYRAC 3 cut(s) 516, 561, 771
HinfI GANTC 3 cut(s) 307, 438, 874
HpaI GTTAAC 1 cut(s) 516
HpaII CCGG 3 cut(s) 444, 1246, 1422
HphI GGTGA 2 cut(s) 783, 1213
Hpy166II GTNNAC 5 cut(s) 516, 561, 583, 771, 990
Hpy188III TCNNGA 3 cut(s) 230, 1020, 1164
Hpy8I GTNNAC 5 cut(s) 516, 561, 583, 771, 990
HpyAV CCTTC 1 cut(s) 275
HpyCH4III ACNGT 6 cut(s) 112, 390, 432, 942, 1072, 1161
HpyCH4V TGCA 3 cut(s) 115, 983, 1123
HpyF10VI GCNNNNNNNGC 2 cut(s) 1240, 1356
HpyF3I CTNAG 3 cut(s) 635, 826, 1351
Hsp92II CATG 3 cut(s) 678, 779, 858
Ksp22I TGATCA 1 cut(s) 807
KspAI GTTAAC 1 cut(s) 516
Kzo9I GATC 5 cut(s) 449, 656, 807, 1115, 1391
LguI GCTCTTC 1 cut(s) 234
LmnI GCTCC 4 cut(s) 339, 1101, 1231, 1339
Lsp1109I GCAGC 4 cut(s) 127, 1116, 1119, 1203
LweI GCATC 1 cut(s) 1203
MaeI CTAG 7 cut(s) 194, 245, 316, 668, 1054, 1111, 1322
MaeIII GTNAC 4 cut(s) 717, 951, 1027, 1155
MalI GATC 5 cut(s) 451, 658, 809, 1117, 1393
MboI GATC 5 cut(s) 449, 656, 807, 1115, 1391
MboII GAAGA 9 cut(s) 208, 218, 251, 263, 287, 432, 655, 1072, 1078
MfeI CAATTG 1 cut(s) 1225
MflI RGATCY 2 cut(s) 1115, 1391
MhlI GDGCHC 3 cut(s) 906, 1236, 1361
MlyI GAGTC 3 cut(s) 316, 432, 883
MmeI TCCRAC 1 cut(s) 1181
MroXI GAANNNNTTC 1 cut(s) 1015
MseI TTAA 6 cut(s) 515, 554, 752, 866, 994, 1298
MslI CAYNNNNRTG 2 cut(s) 498, 594
MspCI CTTAAG 1 cut(s) 993
MspI CCGG 3 cut(s) 444, 1246, 1422
MspR9I CCNGG 3 cut(s) 445, 1246, 1247
MunI CAATTG 1 cut(s) 1225
MwoI GCNNNNNNNGC 2 cut(s) 1240, 1356
NciI CCSGG 3 cut(s) 445, 1246, 1247
NdeII GATC 5 cut(s) 449, 656, 807, 1115, 1391
NlaIII CATG 3 cut(s) 678, 779, 858
NlaIV GGNNCC 5 cut(s) 341, 944, 988, 1187, 1250
NmuCI GTSAC 1 cut(s) 951
NspI RCATGY 2 cut(s) 779, 858
NspV TTCGAA 1 cut(s) 542
OliI CACNNNNGTG 1 cut(s) 594
PaqCI CACCTGC 1 cut(s) 568
PciI ACATGT 1 cut(s) 775
PciSI GCTCTTC 1 cut(s) 234
PdmI GAANNNNTTC 1 cut(s) 1015
PfoI TCCNGGA 1 cut(s) 443
PkrI GCNGC 4 cut(s) 117, 1106, 1109, 1218
PleI GAGTC 3 cut(s) 315, 432, 882
PpsI GAGTC 3 cut(s) 315, 432, 882
PscI ACATGT 1 cut(s) 775
PshAI GACNNNNGTC 1 cut(s) 776
PshBI ATTAAT 1 cut(s) 752
Psp124BI GAGCTC 1 cut(s) 1236
PspFI CCCAGC 2 cut(s) 119, 859
PspN4I GGNNCC 5 cut(s) 341, 944, 988, 1187, 1250
PspPI GGNCC 9 cut(s) 37, 105, 706, 835, 942, 962, 987, 1185, 1249
PsuI RGATCY 2 cut(s) 1115, 1391
RsaI GTAC 4 cut(s) 96, 200, 524, 672
RsaNI GTAC 4 cut(s) 95, 199, 523, 671
RseI CAYNNNNRTG 2 cut(s) 498, 594
SacI GAGCTC 1 cut(s) 1236
SalI GTCGAC 1 cut(s) 559
SapI GCTCTTC 1 cut(s) 234
SaqAI TTAA 6 cut(s) 515, 554, 752, 866, 994, 1298
SatI GCNGC 4 cut(s) 116, 1105, 1108, 1217
Sau3AI GATC 5 cut(s) 449, 656, 807, 1115, 1391
Sau96I GGNCC 9 cut(s) 37, 105, 706, 835, 942, 962, 987, 1185, 1249
ScaI AGTACT 1 cut(s) 96
SchI GAGTC 3 cut(s) 316, 432, 883
ScrFI CCNGG 3 cut(s) 445, 1246, 1247
SduI GDGCHC 3 cut(s) 906, 1236, 1361
SfaNI GCATC 1 cut(s) 1203
SfuI TTCGAA 1 cut(s) 542
SinI GGWCC 7 cut(s) 105, 706, 835, 942, 962, 987, 1249
SmaI CCCGGG 1 cut(s) 1247
SmiMI CAYNNNNRTG 2 cut(s) 498, 594
SmlI CTYRAG 1 cut(s) 993
SmoI CTYRAG 1 cut(s) 993
SspMI CTAG 7 cut(s) 194, 245, 316, 668, 1054, 1111, 1322
SstI GAGCTC 1 cut(s) 1236
StyD4I CCNGG 3 cut(s) 443, 1244, 1245
StyI CCWWGG 1 cut(s) 1263
TaaI ACNGT 6 cut(s) 112, 390, 432, 942, 1072, 1161
TaqI TCGA 3 cut(s) 542, 560, 1163
TatI WGTACW 1 cut(s) 94
Tru1I TTAA 6 cut(s) 515, 554, 752, 866, 994, 1298
Tru9I TTAA 6 cut(s) 515, 554, 752, 866, 994, 1298
TscAI CASTG 2 cut(s) 115, 837
TseFI GTSAC 1 cut(s) 951
TseI GCWGC 4 cut(s) 115, 1104, 1107, 1216
Tsp45I GTSAC 1 cut(s) 951
TspDTI ATGAA 4 cut(s) 179, 1072, 1183, 1360
TspGWI ACGGA 1 cut(s) 282
TspMI CCCGGG 1 cut(s) 1245
TspRI CASTG 2 cut(s) 115, 837
Vha464I CTTAAG 1 cut(s) 993
VpaK11BI GGWCC 7 cut(s) 105, 706, 835, 942, 962, 987, 1249
VspI ATTAAT 1 cut(s) 752
XapI RAATTY 2 cut(s) 840, 868
XceI RCATGY 2 cut(s) 779, 858
XmaI CCCGGG 1 cut(s) 1245
XmiI GTMKAC 1 cut(s) 560
XmnI GAANNNNTTC 1 cut(s) 1015
XspI CTAG 7 cut(s) 194, 245, 316, 668, 1054, 1111, 1322
ZrmI AGTACT 1 cut(s) 96
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.