ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 149 |
| AccI | GTMKAC | 1 cut(s) | 440 |
| AclWI | GGATC | 1 cut(s) | 71 |
| AcsI | RAATTY | 2 cut(s) | 53, 286 |
| AcuI | CTGAAG | 1 cut(s) | 39 |
| AgsI | TTSAA | 3 cut(s) | 316, 338, 399 |
| AjnI | CCWGG | 1 cut(s) | 35 |
| AluBI | AGCT | 2 cut(s) | 23, 104 |
| AluI | AGCT | 2 cut(s) | 23, 104 |
| Alw26I | GTCTC | 2 cut(s) | 136, 364 |
| AlwI | GGATC | 1 cut(s) | 71 |
| AoxI | GGCC | 1 cut(s) | 430 |
| ApoI | RAATTY | 2 cut(s) | 53, 286 |
| AspS9I | GGNCC | 2 cut(s) | 415, 431 |
| AvaII | GGWCC | 1 cut(s) | 415 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 156, 189, 314, 347 |
| BccI | CCATC | 1 cut(s) | 89 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 50, 84 |
| BciT130I | CCWGG | 1 cut(s) | 37 |
| BcoDI | GTCTC | 2 cut(s) | 136, 364 |
| Bme1390I | CCNGG | 1 cut(s) | 37 |
| Bme18I | GGWCC | 1 cut(s) | 415 |
| BmgT120I | GGNCC | 2 cut(s) | 415, 431 |
| BmiI | GGNNCC | 1 cut(s) | 416 |
| BmrFI | CCNGG | 1 cut(s) | 37 |
| BsaJI | CCNNGG | 2 cut(s) | 293, 427 |
| Bse1I | ACTGG | 2 cut(s) | 94, 385 |
| Bse3DI | GCAATG | 1 cut(s) | 504 |
| BseBI | CCWGG | 1 cut(s) | 37 |
| BseDI | CCNNGG | 2 cut(s) | 293, 427 |
| BseGI | GGATG | 1 cut(s) | 121 |
| BseMI | GCAATG | 1 cut(s) | 504 |
| BseMII | CTCAG | 1 cut(s) | 162 |
| BseNI | ACTGG | 2 cut(s) | 94, 385 |
| BshFI | GGCC | 1 cut(s) | 432 |
| BslFI | GGGAC | 1 cut(s) | 428 |
| BsmAI | GTCTC | 2 cut(s) | 136, 364 |
| BsmFI | GGGAC | 1 cut(s) | 428 |
| BsnI | GGCC | 1 cut(s) | 432 |
| Bsp143I | GATC | 2 cut(s) | 61, 76 |
| BspANI | GGCC | 1 cut(s) | 432 |
| BspCNI | CTCAG | 1 cut(s) | 161 |
| BspLI | GGNNCC | 1 cut(s) | 416 |
| BspPI | GGATC | 1 cut(s) | 71 |
| BsrDI | GCAATG | 1 cut(s) | 504 |
| BsrI | ACTGG | 2 cut(s) | 94, 385 |
| BssECI | CCNNGG | 2 cut(s) | 293, 427 |
| BssMI | GATC | 2 cut(s) | 61, 76 |
| BssNAI | GTATAC | 1 cut(s) | 441 |
| BssT1I | CCWWGG | 2 cut(s) | 293, 427 |
| Bst1107I | GTATAC | 1 cut(s) | 441 |
| Bst2UI | CCWGG | 1 cut(s) | 37 |
| Bst4CI | ACNGT | 3 cut(s) | 124, 130, 327 |
| BstDEI | CTNAG | 2 cut(s) | 148, 435 |
| BstF5I | GGATG | 1 cut(s) | 121 |
| BstKTI | GATC | 2 cut(s) | 64, 79 |
| BstMAI | GTCTC | 2 cut(s) | 136, 364 |
| BstMBI | GATC | 2 cut(s) | 61, 76 |
| BstNI | CCWGG | 1 cut(s) | 37 |
| BstSCI | CCNGG | 1 cut(s) | 35 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 366 |
| BstZ17I | GTATAC | 1 cut(s) | 441 |
| BsuRI | GGCC | 1 cut(s) | 432 |
| BtsCI | GGATG | 1 cut(s) | 121 |
| BtsIMutI | CAGTG | 1 cut(s) | 332 |
| Cfr13I | GGNCC | 2 cut(s) | 415, 431 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 73, 108 |
| CviAII | CATG | 2 cut(s) | 214, 230 |
| CviJI | RGCY | 5 cut(s) | 23, 104, 298, 351, 432 |
| CviKI_1 | RGCY | 5 cut(s) | 23, 104, 298, 351, 432 |
| DdeI | CTNAG | 2 cut(s) | 148, 435 |
| DpnI | GATC | 2 cut(s) | 63, 78 |
| DpnII | GATC | 2 cut(s) | 61, 76 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 149 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 149 |
| Eco130I | CCWWGG | 2 cut(s) | 293, 427 |
| Eco47I | GGWCC | 1 cut(s) | 415 |
| Eco57I | CTGAAG | 1 cut(s) | 39 |
| EcoO109I | RGGNCCY | 2 cut(s) | 415, 431 |
| EcoRII | CCWGG | 1 cut(s) | 35 |
| EcoT14I | CCWWGG | 2 cut(s) | 293, 427 |
| ErhI | CCWWGG | 2 cut(s) | 293, 427 |
| FaeI | CATG | 2 cut(s) | 217, 233 |
| FaiI | YATR | 7 cut(s) | 215, 219, 231, 267, 441, 455, 509 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 233, 265 |
| FaqI | GGGAC | 1 cut(s) | 428 |
| FatI | CATG | 2 cut(s) | 213, 229 |
| FblI | GTMKAC | 1 cut(s) | 440 |
| FokI | GGATG | 1 cut(s) | 128 |
| HaeIII | GGCC | 1 cut(s) | 432 |
| Hin1II | CATG | 2 cut(s) | 217, 233 |
| HincII | GTYRAC | 1 cut(s) | 154 |
| HindII | GTYRAC | 1 cut(s) | 154 |
| HinfI | GANTC | 1 cut(s) | 372 |
| Hpy166II | GTNNAC | 2 cut(s) | 154, 441 |
| Hpy8I | GTNNAC | 2 cut(s) | 154, 441 |
| HpyCH4III | ACNGT | 3 cut(s) | 124, 130, 327 |
| HpyCH4V | TGCA | 2 cut(s) | 71, 404 |
| HpyF3I | CTNAG | 2 cut(s) | 148, 435 |
| Hsp92II | CATG | 2 cut(s) | 217, 233 |
| Kzo9I | GATC | 2 cut(s) | 61, 76 |
| LmnI | GCTCC | 1 cut(s) | 361 |
| LpnPI | CCDG | 6 cut(s) | 22, 30, 49, 75, 155, 398 |
| MaeIII | GTNAC | 1 cut(s) | 124 |
| MalI | GATC | 2 cut(s) | 63, 78 |
| MboI | GATC | 2 cut(s) | 61, 76 |
| MfeI | CAATTG | 1 cut(s) | 72 |
| MluCI | AATT | 4 cut(s) | 53, 72, 286, 407 |
| MlyI | GAGTC | 1 cut(s) | 366 |
| MnlI | CCTC | 2 cut(s) | 341, 450 |
| MslI | CAYNNNNRTG | 1 cut(s) | 234 |
| MspR9I | CCNGG | 1 cut(s) | 37 |
| MunI | CAATTG | 1 cut(s) | 72 |
| MvaI | CCWGG | 1 cut(s) | 37 |
| NdeII | GATC | 2 cut(s) | 61, 76 |
| NlaIII | CATG | 2 cut(s) | 217, 233 |
| NlaIV | GGNNCC | 1 cut(s) | 416 |
| PfoI | TCCNGGA | 1 cut(s) | 35 |
| PleI | GAGTC | 1 cut(s) | 366 |
| PpsI | GAGTC | 1 cut(s) | 366 |
| PpuMI | RGGWCCY | 1 cut(s) | 415 |
| Psp5II | RGGWCCY | 1 cut(s) | 415 |
| Psp6I | CCWGG | 1 cut(s) | 35 |
| PspGI | CCWGG | 1 cut(s) | 35 |
| PspN4I | GGNNCC | 1 cut(s) | 416 |
| PspPI | GGNCC | 2 cut(s) | 415, 431 |
| PspPPI | RGGWCCY | 1 cut(s) | 415 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 431, 463 |
| RseI | CAYNNNNRTG | 1 cut(s) | 234 |
| Sau3AI | GATC | 2 cut(s) | 61, 76 |
| Sau96I | GGNCC | 2 cut(s) | 415, 431 |
| SchI | GAGTC | 1 cut(s) | 366 |
| ScrFI | CCNGG | 1 cut(s) | 37 |
| SetI | ASST | 5 cut(s) | 19, 25, 106, 193, 420 |
| SinI | GGWCC | 1 cut(s) | 415 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 234 |
| Sse9I | AATT | 4 cut(s) | 53, 72, 286, 407 |
| StyD4I | CCNGG | 1 cut(s) | 35 |
| StyI | CCWWGG | 2 cut(s) | 293, 427 |
| TaaI | ACNGT | 3 cut(s) | 124, 130, 327 |
| TasI | AATT | 4 cut(s) | 53, 72, 286, 407 |
| TscAI | CASTG | 1 cut(s) | 332 |
| TspDTI | ATGAA | 3 cut(s) | 202, 252, 382 |
| TspRI | CASTG | 1 cut(s) | 332 |
| VpaK11BI | GGWCC | 1 cut(s) | 415 |
| XapI | RAATTY | 2 cut(s) | 53, 286 |
| XmiI | GTMKAC | 1 cut(s) | 440 |