FvH4_3g32112

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000147
Physical Location & Seq
Reverse (-)
27375311 .. 27377421
2111 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g32112.t1

Sequence Viewer

Length: 1641 bp
ATGCGGAGGAAGTCCCTTCTTTCCAAGCCGCAATCTTGGCTCAATCGTCCGGCAAGGGTTCATCGGCGAAAGCCGAGTTCTAGGAGAACGGTGGGATGCGGCGATCCATATTCAAACCATCTCAGGCATAGTCGCCACAACTCTGACGTCGGAATCAGGCCATCTGTGTCACATCCGATGCCTCGGGTTTCAAACTCTGAAGATGCTCTCAAGGTCGCAATCACAACTGCCAAAGTTCATGAGGGTTGGAGCAGCAGAGTCACGGAGCTGAAGAGTTTGGGTCTTTTTCTCGGGACCATTTCTGATTTATCTAGGCCTAGCCCAAGGCCTAATCCTATACCACCCCTCCCTAGAGACCCAACAAAAGGCAAAGGCCCAGCCCTCCCGTCAATCCGGATTGAAGCCTTCCCTCATTCAGAACGACAATCACCAAATCAACACACTTTTCATTCCAAACCCAGAAATGCCTCTGTCACCCCTTCCATCTCTCTCCCGTCCTCCTCGGACGAGGATATTTCTCCAATTGTGGTAGATCTGTTCCAAGCTCTTCAATCCGTGGGAGAGGTTCAGTTGGAGGTCGGGGCCATGGAAGAAGGGCTTCAGAGTATCCAGCCACAAGGGATCAATGAGTCAAACCATGGCGTGGAACTGTCAAGGTCTTGGACGGGCCTTGACAGTTCAGAAGCTAGGGGAGATGATATGCTCCCATTCTCCGTCCGTGCTTTGTGGTGGAGGCCTGAGGTCTCGATCGATATAATTTATAAGGACAGAAATCTCATTGATACTCTCATTGTCTTCACCAATCTAAATTCTACCATCAGAGTCACCTTTTTCTATGGTCCTCCATACCCTGAAGACAAAGAAGCTTTCTGGTCATCTCTTTCCTGCCTGGATGTTTCTAATTCAATCCCTTGGATTTGTCTCGGGGATTTTAATGAAATTGTCTCAAATGATGAGAAGGAGGGGGGCATTCCTTGGCACTGGAACCGCCCGAGATATCTCAGAGATTTCATGGATAAGTTTGCTCTCATTGACCTGAAGTTCATAGGGCCGAAGCTCACCTGGGAAAGCAGGAGGGAAAATGTGGATGAGGTGACAAAGGAAAGGTTGGATAGAGTAATAGGTAATGACTGTTGGCTTTGTTCTTGGCCGGAGGCGAGGGTGATTCATGAACCAAGGGTGGGTTCAGACCACTGTCCCCTCATTCTTTATGCACAGGCCCGTGTTTGTAAAGGCCCCAATTTGTTCCATTTCGAAGCAGGTTGGGCTGAGGACCCGAAATGCGAGGAAGTGATCAAGTCCTCTTGGGTTTCTGACTCTCTCTTGGAACCCTTCTCTCTGTGGGACTCAAATTTACGGGCTTGTCGCACTAGTCTTTTGACTTGGAGTAAGTTGAAATTTCCAAATAGTAGTGCAGAGATCAAAGCTTTATCGTGGGAGTTGCAAGGCTTGCAAGAGGGTAAGTCTTTTCCTCTTTTGATTGCTAGAGAAAAGGTGATCCTTTCACACTTGGAAAGAGCATGGAAGAGAGAAGAGTGCTTCTGGAAGCAGAGATCTAGAATCAAGTGGTTATGTGAAGGAGATAGAAACACAAAGTTTTTTCACCTTACCACTCAACAGAAGGCAGAGAAACAAAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

547

Amino Acids

62.39

Weight (kDa)

8.54

Isoelectric Point (pI)

52.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000147)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10354 FvH4_1g17131 FvH4_2g11611 FvH4_2g33851 FvH4_3g32112 FvH4_3g35052 FvH4_3g44611 FvH4_4g05921 FvH4_4g06411 FvH4_4g06792 FvH4_4g10365 FvH4_4g21422 FvH4_4g22401 FvH4_4g30261 FvH4_5g08843 FvH4_5g14731 FvH4_5g24781 FvH4_5g26231 FvH4_5g31282 FvH4_6g23371 FvH4_6g38511 FvH4_7g01171 FvH4_7g03341 FvH4_7g06171 FvH4_7g32472
prunus_persica Prupe.2G036900_v2.0.a1
pyrus_communis pycom02g19900 pycom03g01520 pycom05g10510 pycom16g23820
rosa_chinensis RchiOBHm_Chr1g0316031 RchiOBHm_Chr1g0342451 RchiOBHm_Chr1g0344541 RchiOBHm_Chr1g0364721 RchiOBHm_Chr2g0133541 RchiOBHm_Chr2g0134511 RchiOBHm_Chr2g0145891 RchiOBHm_Chr2g0163241 RchiOBHm_Chr5g0027201 RchiOBHm_Chr5g0027881 RchiOBHm_Chr5g0047471 RchiOBHm_Chr7g0210901
rosa_laevigata RLG00000011116 RLG00000017964 RLG00000018128 RLG00000018387 RLG00000018829 RLG00000019353 RLG00000028973 RLG00000035870 RLG00000036629
rosa_multiflora Rmu_co8126340.1_g000001 Rmu_co8216750.1_g000001 Rmu_co8222072.1_g000001 Rmu_co8332453.1_g000001 Rmu_co8349913.1_g000001 Rmu_co8405337.1_g000001 Rmu_sc0000041.1_g000012 Rmu_sc0000166.1_g000029 Rmu_sc0000251.1_g000019 Rmu_sc0000271.1_g000028 Rmu_sc0000509.1_g000036 Rmu_sc0000543.1_g000048 Rmu_sc0000808.1_g000003 Rmu_sc0000847.1_g000040 Rmu_sc0000972.1_g000020 Rmu_sc0001260.1_g000001 Rmu_sc0001464.1_g000026 Rmu_sc0001616.1_g000003 Rmu_sc0001669.1_g000001 Rmu_sc0002005.1_g000001 Rmu_sc0002014.1_g000010 Rmu_sc0002082.1_g000033 Rmu_sc0002302.1_g000024 Rmu_sc0002531.1_g000045 Rmu_sc0003276.1_g000002 Rmu_sc0003737.1_g000007 Rmu_sc0003832.1_g000022 Rmu_sc0004080.1_g000011 Rmu_sc0004487.1_g000009 Rmu_sc0004988.1_g000018 Rmu_sc0004988.1_g000019 Rmu_sc0005254.1_g000002 Rmu_sc0005733.1_g000004 Rmu_sc0006413.1_g000006 Rmu_sc0007121.1_g000013 Rmu_sc0007869.1_g000006 Rmu_sc0008035.1_g000015 Rmu_sc0008279.1_g000017 Rmu_sc0008351.1_g000014 Rmu_sc0008957.1_g000007 Rmu_sc0009012.1_g000007 Rmu_sc0010556.1_g000009 Rmu_sc0012889.1_g000003 Rmu_sc0019808.1_g000004 Rmu_sc0028113.1_g000001 Rmu_sc0031202.1_g000001 Rmu_sc0034436.1_g000001 Rmu_sc0034445.1_g000001 Rmu_sc0040044.1_g000001 Rmu_ssc0000062.1_g000032 Rmu_ssc0000372.1_g000018
rosa_roxburghii Rroxscaffold_1G00001520 Rroxscaffold_1G00039990 Rroxscaffold_1G00046370 Rroxscaffold_2G00110140 Rroxscaffold_2G00131420 Rroxscaffold_3G00222390 Rroxscaffold_5G00336040 Rroxscaffold_5G00338000 Rroxscaffold_5G00344030 Rroxscaffold_5G00363460 Rroxscaffold_6G00402000 Rroxscaffold_7G00194940
rosa_rugosa Rorug01G0106500 Rorug01G0111300 Rorug01G0247000 Rorug02G0318100.1 Rorug02G0318200 Rorug02G0459500 Rorug03G0108100 Rorug03G0200500 Rorug03G0232500 Rorug03G0240600 Rorug04G0105300 Rorug04G0256600 Rorug06G0079300 Rorug06G0082700 Rorug06G0095600 Rorug06G0179000 Rorug07G0113500 Rorug07G0271100
rosa_samantha Rh1AG087200 Rh1CG085300 Rh1DG013200 Rh1DG091700 Rh1DG091800 Rh1DG338300 Rh2AG375400 Rh2AG407000 Rh2AG513500 Rh2BG277700 Rh2BG371200 Rh2BG376100 Rh2BG580500 Rh2CG354300 Rh2DG200100 Rh2DG388000 Rh2DG393500 Rh2DG426400 Rh3CG304800 Rh4AG044600 Rh4AG220500 Rh4BG379300 Rh4CG007100 Rh4CG030300 Rh4CG038000 Rh4CG114900 Rh4CG393700 Rh5AG124900 Rh5AG342300 Rh5BG414400 Rh5CG263800 Rh5CG439000 Rh5DG231100 Rh5DG566900 Rh6AG138600 Rh6AG200000 Rh6AG253100 Rh6AG390900 Rh6AG441600 Rh6BG194700 Rh6BG225800 Rh6BG256100 Rh6CG231700 Rh6CG231900 Rh6CG312200 Rh6CG453700 Rh6DG219400 Rh7AG357700 Rh7AG442000 Rh7CG425700 Rh7CG474600 Rh7CG494100 Rh7DG253900 Rh7DG294700 Rh7DG401600 Rh7DG461300
rosa_wichuraiana Rw1G001190 Rw2G047020 Rw4G003490 Rw5G039690 Rw6G010450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 762
AatII GACGTC 1 cut(s) 150
Acc36I ACCTGC 1 cut(s) 1250
AccB7I CCANNNNNTGG 1 cut(s) 643
AccIII TCCGGA 1 cut(s) 393
AciI CCGC 4 cut(s) 4, 29, 99, 988
AclWI GGATC 3 cut(s) 98, 629, 1492
AcoI YGGCCR 1 cut(s) 1148
AcsI RAATTY 3 cut(s) 808, 1351, 1397
AcuI CTGAAG 5 cut(s) 219, 290, 584, 873, 1058
AcyI GRCGYC 1 cut(s) 147
AfiI CCNNNNNNNGG 3 cut(s) 365, 643, 1181
AgsI TTSAA 6 cut(s) 114, 192, 401, 551, 906, 1396
AhlI ACTAGT 1 cut(s) 1370
AjnI CCWGG 2 cut(s) 888, 1061
AjuI GAANNNNNNNTTGG 2 cut(s) 1168, 1200
AluBI AGCT 6 cut(s) 268, 545, 686, 866, 1057, 1427
AluI AGCT 6 cut(s) 268, 545, 686, 866, 1057, 1427
Alw26I GTCTC 4 cut(s) 348, 748, 926, 949
AlwI GGATC 3 cut(s) 98, 629, 1492
Ama87I CYCGRG 4 cut(s) 183, 290, 923, 991
Aor13HI TCCGGA 1 cut(s) 393
ApeKI GCWGC 1 cut(s) 252
ApoI RAATTY 3 cut(s) 808, 1351, 1397
Asp700I GAANNNNTTC 1 cut(s) 597
AspS9I GGNCC 9 cut(s) 294, 374, 582, 667, 839, 1049, 1219, 1235, 1273
AsuHPI GGTGA 9 cut(s) 420, 466, 790, 817, 1051, 1105, 1174, 1507, 1595
AsuII TTCGAA 1 cut(s) 1254
AvaI CYCGRG 4 cut(s) 183, 290, 923, 991
AvaII GGWCC 3 cut(s) 294, 839, 1273
AxyI CCTNAGG 1 cut(s) 738
BbsI GAAGAC 2 cut(s) 787, 861
BbvCI CCTCAGC 1 cut(s) 1269
BbvI GCAGC 1 cut(s) 264
BccI CCATC 4 cut(s) 126, 169, 491, 824
BciT130I CCWGG 2 cut(s) 890, 1063
BciVI GTATCC 1 cut(s) 617
BclI TGATCA 1 cut(s) 1293
BcoDI GTCTC 4 cut(s) 348, 748, 926, 949
BcuI ACTAGT 1 cut(s) 1370
BfaI CTAG 8 cut(s) 81, 312, 318, 351, 687, 1371, 1485, 1557
BfuAI ACCTGC 1 cut(s) 1250
BfuI GTATCC 1 cut(s) 617
BglII AGATCT 2 cut(s) 532, 1553
BisI GCNGC 3 cut(s) 29, 100, 253
BlsI GCNGC 3 cut(s) 30, 101, 254
Bme1390I CCNGG 2 cut(s) 890, 1063
Bme18I GGWCC 3 cut(s) 294, 839, 1273
BmeT110I CYCGRG 4 cut(s) 183, 290, 923, 991
BmgT120I GGNCC 9 cut(s) 294, 374, 582, 667, 839, 1049, 1219, 1235, 1273
BmiI GGNNCC 6 cut(s) 295, 583, 986, 1237, 1275, 1329
BmrFI CCNGG 2 cut(s) 890, 1063
BmsI GCATC 3 cut(s) 86, 168, 193
BoxI GACNNNNGTC 1 cut(s) 1194
BpiI GAAGAC 2 cut(s) 787, 861
Bpu10I CCTNAGC 1 cut(s) 1269
Bpu14I TTCGAA 1 cut(s) 1254
BpuEI CTTGAG 1 cut(s) 194
Bsa29I ATCGAT 1 cut(s) 750
BsaHI GRCGYC 1 cut(s) 147
BsaI GGTCTC 2 cut(s) 348, 748
BsaWI WCCGGW 1 cut(s) 393
BsaXI ACNNNNNCTCC 2 cut(s) 330, 360
Bsc4I CCNNNNNNNGG 3 cut(s) 365, 643, 1181
Bse1I ACTGG 1 cut(s) 986
Bse21I CCTNAGG 1 cut(s) 738
BseAI TCCGGA 1 cut(s) 393
BseBI CCWGG 2 cut(s) 890, 1063
BseCI ATCGAT 1 cut(s) 750
BseGI GGATG 4 cut(s) 101, 172, 898, 1093
BseLI CCNNNNNNNGG 3 cut(s) 365, 643, 1181
BseMII CTCAG 4 cut(s) 136, 729, 1015, 1260
BseNI ACTGG 1 cut(s) 986
BseRI GAGGAG 1 cut(s) 490
BseXI GCAGC 1 cut(s) 264
BseYI CCCAGC 1 cut(s) 376
BsgI GTGCAG 1 cut(s) 1434
Bsh1285I CGRYCG 1 cut(s) 750
BshVI ATCGAT 1 cut(s) 750
BsiEI CGRYCG 1 cut(s) 750
BsiHKCI CYCGRG 4 cut(s) 183, 290, 923, 991
BsiSI CCGG 3 cut(s) 50, 394, 1151
BslFI GGGAC 3 cut(s) 307, 1182, 1358
BslI CCNNNNNNNGG 3 cut(s) 365, 643, 1181
BsmAI GTCTC 4 cut(s) 348, 748, 926, 949
BsmFI GGGAC 3 cut(s) 307, 1182, 1358
BsmI GAATGC 1 cut(s) 969
Bso31I GGTCTC 2 cut(s) 348, 748
BsoBI CYCGRG 4 cut(s) 183, 290, 923, 991
Bsp119I TTCGAA 1 cut(s) 1254
Bsp13I TCCGGA 1 cut(s) 393
Bsp143I GATC 8 cut(s) 103, 532, 621, 747, 1293, 1419, 1497, 1553
Bsp19I CCATGG 2 cut(s) 585, 637
BspACI CCGC 4 cut(s) 4, 29, 99, 988
BspCNI CTCAG 4 cut(s) 135, 730, 1014, 1261
BspDI ATCGAT 1 cut(s) 750
BspEI TCCGGA 1 cut(s) 393
BspHI TCATGA 2 cut(s) 238, 1168
BspLI GGNNCC 6 cut(s) 295, 583, 986, 1237, 1275, 1329
BspMI ACCTGC 1 cut(s) 1250
BspPI GGATC 3 cut(s) 98, 629, 1492
BspQI GCTCTTC 1 cut(s) 552
BspT104I TTCGAA 1 cut(s) 1254
BspTNI GGTCTC 2 cut(s) 348, 748
BsrI ACTGG 1 cut(s) 986
BssMI GATC 8 cut(s) 103, 532, 621, 747, 1293, 1419, 1497, 1553
BssNI GRCGYC 1 cut(s) 147
BssT1I CCWWGG 6 cut(s) 323, 585, 637, 911, 974, 1175
Bst2UI CCWGG 2 cut(s) 890, 1063
Bst4CI ACNGT 5 cut(s) 91, 651, 677, 1133, 1196
Bst6I CTCTTC 4 cut(s) 266, 552, 1520, 1527
BstACI GRCGYC 1 cut(s) 147
BstAPI GCANNNNNTGC 1 cut(s) 1450
BstBI TTCGAA 1 cut(s) 1254
BstC8I GCNNGC 1 cut(s) 1451
BstDEI CTNAG 4 cut(s) 122, 738, 1001, 1269
BstDSI CCRYGG 3 cut(s) 555, 585, 637
BstF5I GGATG 4 cut(s) 101, 172, 898, 1093
BstKTI GATC 8 cut(s) 106, 535, 624, 750, 1296, 1422, 1500, 1556
BstMAI GTCTC 4 cut(s) 348, 748, 926, 949
BstMBI GATC 8 cut(s) 103, 532, 621, 747, 1293, 1419, 1497, 1553
BstMCI CGRYCG 1 cut(s) 750
BstMWI GCNNNNNNNGC 3 cut(s) 37, 1265, 1450
BstNI CCWGG 2 cut(s) 890, 1063
BstPAI GACNNNNGTC 1 cut(s) 1194
BstSCI CCNGG 2 cut(s) 888, 1061
BstV1I GCAGC 1 cut(s) 264
BstV2I GAAGAC 2 cut(s) 787, 861
BstX2I RGATCY 2 cut(s) 532, 1553
BstYI RGATCY 2 cut(s) 532, 1553
Bsu15I ATCGAT 1 cut(s) 750
Bsu36I CCTNAGG 1 cut(s) 738
BsuI GTATCC 1 cut(s) 617
BsuTUI ATCGAT 1 cut(s) 750
BtgI CCRYGG 3 cut(s) 555, 585, 637
BtsCI GGATG 4 cut(s) 101, 172, 898, 1093
BtsIMutI CAGTG 2 cut(s) 979, 1192
BveI ACCTGC 1 cut(s) 1250
Cac8I GCNNGC 1 cut(s) 1451
CciI TCATGA 2 cut(s) 238, 1168
Cfr13I GGNCC 9 cut(s) 294, 374, 582, 667, 839, 1049, 1219, 1235, 1273
ClaI ATCGAT 1 cut(s) 750
CviAII CATG 6 cut(s) 239, 586, 638, 1012, 1169, 1521
DdeI CTNAG 4 cut(s) 122, 738, 1001, 1269
DpnI GATC 8 cut(s) 105, 534, 623, 749, 1295, 1421, 1499, 1555
DpnII GATC 8 cut(s) 103, 532, 621, 747, 1293, 1419, 1497, 1553
EaeI YGGCCR 1 cut(s) 1148
Eam1104I CTCTTC 4 cut(s) 266, 552, 1520, 1527
EarI CTCTTC 4 cut(s) 266, 552, 1520, 1527
Eco130I CCWWGG 6 cut(s) 323, 585, 637, 911, 974, 1175
Eco147I AGGCCT 3 cut(s) 316, 328, 736
Eco31I GGTCTC 2 cut(s) 348, 748
Eco32I GATATC 1 cut(s) 998
Eco47I GGWCC 3 cut(s) 294, 839, 1273
Eco57I CTGAAG 5 cut(s) 219, 290, 584, 873, 1058
Eco81I CCTNAGG 1 cut(s) 738
Eco88I CYCGRG 4 cut(s) 183, 290, 923, 991
EcoO109I RGGNCCY 2 cut(s) 1235, 1273
EcoRII CCWGG 2 cut(s) 888, 1061
EcoRV GATATC 1 cut(s) 998
EcoT14I CCWWGG 6 cut(s) 323, 585, 637, 911, 974, 1175
ErhI CCWWGG 6 cut(s) 323, 585, 637, 911, 974, 1175
FaeI CATG 6 cut(s) 242, 589, 641, 1015, 1172, 1524
FalI AAGNNNNNCTT 2 cut(s) 582, 614
FaqI GGGAC 3 cut(s) 307, 1182, 1358
FatI CATG 6 cut(s) 238, 585, 637, 1011, 1168, 1520
FbaI TGATCA 1 cut(s) 1293
Fnu4HI GCNGC 3 cut(s) 29, 100, 253
FokI GGATG 4 cut(s) 108, 159, 905, 1100
Fsp4HI GCNGC 3 cut(s) 29, 100, 253
FspBI CTAG 8 cut(s) 81, 312, 318, 351, 687, 1371, 1485, 1557
GluI GCNGC 3 cut(s) 29, 100, 253
GsaI CCCAGC 1 cut(s) 380
HapII CCGG 3 cut(s) 50, 394, 1151
Hin1I GRCGYC 1 cut(s) 147
Hin1II CATG 6 cut(s) 242, 589, 641, 1015, 1172, 1524
HindIII AAGCTT 2 cut(s) 864, 1425
HinfI GANTC 8 cut(s) 153, 258, 629, 822, 1165, 1316, 1346, 1560
HpaII CCGG 3 cut(s) 50, 394, 1151
HphI GGTGA 9 cut(s) 420, 466, 790, 817, 1051, 1105, 1174, 1507, 1595
Hpy188III TCNNGA 7 cut(s) 239, 292, 394, 745, 1169, 1543, 1557
Hpy99I CGWCG 1 cut(s) 152
HpyAV CCTTC 8 cut(s) 26, 415, 489, 587, 952, 1342, 1571, 1615
HpyCH4III ACNGT 5 cut(s) 91, 651, 677, 1133, 1196
HpyCH4IV ACGT 1 cut(s) 147
HpyCH4V TGCA 4 cut(s) 1214, 1415, 1444, 1453
HpyF10VI GCNNNNNNNGC 3 cut(s) 37, 1265, 1450
HpyF3I CTNAG 4 cut(s) 122, 738, 1001, 1269
HpySE526I ACGT 1 cut(s) 147
Hsp92I GRCGYC 1 cut(s) 147
Hsp92II CATG 6 cut(s) 242, 589, 641, 1015, 1172, 1524
Kpn2I TCCGGA 1 cut(s) 393
Ksp22I TGATCA 1 cut(s) 1293
Kzo9I GATC 8 cut(s) 103, 532, 621, 747, 1293, 1419, 1497, 1553
LguI GCTCTTC 1 cut(s) 552
LmnI GCTCC 3 cut(s) 249, 265, 708
Lsp1109I GCAGC 1 cut(s) 264
LweI GCATC 3 cut(s) 86, 168, 193
MaeI CTAG 8 cut(s) 81, 312, 318, 351, 687, 1371, 1485, 1557
MaeII ACGT 1 cut(s) 147
MaeIII GTNAC 5 cut(s) 168, 259, 472, 823, 1093
MalI GATC 8 cut(s) 105, 534, 623, 749, 1295, 1421, 1499, 1555
MboI GATC 8 cut(s) 103, 532, 621, 747, 1293, 1419, 1497, 1553
MboII GAAGA 8 cut(s) 212, 283, 539, 602, 787, 866, 1537, 1544
MfeI CAATTG 1 cut(s) 522
MflI RGATCY 2 cut(s) 532, 1553
MluCI AATT 8 cut(s) 522, 756, 808, 901, 939, 1240, 1351, 1397
MlyI GAGTC 5 cut(s) 267, 638, 831, 1310, 1340
MmeI TCCRAC 4 cut(s) 130, 227, 552, 1089
MroI TCCGGA 1 cut(s) 393
MroXI GAANNNNTTC 1 cut(s) 597
MseI TTAA 1 cut(s) 933
MspI CCGG 3 cut(s) 50, 394, 1151
MspR9I CCNGG 2 cut(s) 890, 1063
MunI CAATTG 1 cut(s) 522
Mva1269I GAATGC 1 cut(s) 969
MvaI CCWGG 2 cut(s) 890, 1063
MwoI GCNNNNNNNGC 3 cut(s) 37, 1265, 1450
NcoI CCATGG 2 cut(s) 585, 637
NdeII GATC 8 cut(s) 103, 532, 621, 747, 1293, 1419, 1497, 1553
NlaIII CATG 6 cut(s) 242, 589, 641, 1015, 1172, 1524
NlaIV GGNNCC 6 cut(s) 295, 583, 986, 1237, 1275, 1329
NmeAIII GCCGAG 1 cut(s) 99
NmuCI GTSAC 5 cut(s) 168, 259, 472, 823, 1093
NspV TTCGAA 1 cut(s) 1254
PagI TCATGA 2 cut(s) 238, 1168
PceI AGGCCT 3 cut(s) 316, 328, 736
PciSI GCTCTTC 1 cut(s) 552
PctI GAATGC 1 cut(s) 969
PdmI GAANNNNTTC 1 cut(s) 597
PfeI GAWTC 3 cut(s) 153, 1165, 1560
PflMI CCANNNNNTGG 1 cut(s) 643
PkrI GCNGC 3 cut(s) 30, 101, 254
Ple19I CGATCG 1 cut(s) 750
PleI GAGTC 5 cut(s) 266, 637, 830, 1310, 1340
PpsI GAGTC 5 cut(s) 266, 637, 830, 1310, 1340
PpuMI RGGWCCY 1 cut(s) 1273
PshAI GACNNNNGTC 1 cut(s) 1194
PsiI TTATAA 1 cut(s) 762
Psp5II RGGWCCY 1 cut(s) 1273
Psp6I CCWGG 2 cut(s) 888, 1061
PspFI CCCAGC 1 cut(s) 376
PspGI CCWGG 2 cut(s) 888, 1061
PspN4I GGNNCC 6 cut(s) 295, 583, 986, 1237, 1275, 1329
PspPI GGNCC 9 cut(s) 294, 374, 582, 667, 839, 1049, 1219, 1235, 1273
PspPPI RGGWCCY 1 cut(s) 1273
PsuI RGATCY 2 cut(s) 532, 1553
PvuI CGATCG 1 cut(s) 750
SapI GCTCTTC 1 cut(s) 552
SaqAI TTAA 1 cut(s) 933
SatI GCNGC 3 cut(s) 29, 100, 253
Sau3AI GATC 8 cut(s) 103, 532, 621, 747, 1293, 1419, 1497, 1553
Sau96I GGNCC 9 cut(s) 294, 374, 582, 667, 839, 1049, 1219, 1235, 1273
SchI GAGTC 5 cut(s) 267, 638, 831, 1310, 1340
ScrFI CCNGG 2 cut(s) 890, 1063
SfaNI GCATC 3 cut(s) 86, 168, 193
SfuI TTCGAA 1 cut(s) 1254
SinI GGWCC 3 cut(s) 294, 839, 1273
SmlI CTYRAG 1 cut(s) 209
SmoI CTYRAG 1 cut(s) 209
SpeI ACTAGT 1 cut(s) 1370
Sse9I AATT 8 cut(s) 522, 756, 808, 901, 939, 1240, 1351, 1397
SseBI AGGCCT 3 cut(s) 316, 328, 736
SsiI CCGC 4 cut(s) 4, 29, 99, 988
SspMI CTAG 8 cut(s) 81, 312, 318, 351, 687, 1371, 1485, 1557
StuI AGGCCT 3 cut(s) 316, 328, 736
StyD4I CCNGG 2 cut(s) 888, 1061
StyI CCWWGG 6 cut(s) 323, 585, 637, 911, 974, 1175
TaaI ACNGT 5 cut(s) 91, 651, 677, 1133, 1196
TaiI ACGT 1 cut(s) 150
TaqI TCGA 3 cut(s) 746, 750, 1254
TasI AATT 8 cut(s) 522, 756, 808, 901, 939, 1240, 1351, 1397
TauI GCSGC 2 cut(s) 31, 102
TfiI GAWTC 3 cut(s) 153, 1165, 1560
Tru1I TTAA 1 cut(s) 933
Tru9I TTAA 1 cut(s) 933
TscAI CASTG 2 cut(s) 986, 1199
TseFI GTSAC 5 cut(s) 168, 259, 472, 823, 1093
TseI GCWGC 1 cut(s) 252
Tsp45I GTSAC 5 cut(s) 168, 259, 472, 823, 1093
TspDTI ATGAA 8 cut(s) 50, 227, 437, 951, 1000, 1033, 1157, 1185
TspGWI ACGGA 4 cut(s) 278, 544, 703, 707
TspRI CASTG 2 cut(s) 986, 1199
Van91I CCANNNNNTGG 1 cut(s) 643
VpaK11BI GGWCC 3 cut(s) 294, 839, 1273
XapI RAATTY 3 cut(s) 808, 1351, 1397
XbaI TCTAGA 1 cut(s) 1556
XmnI GAANNNNTTC 1 cut(s) 597
XspI CTAG 8 cut(s) 81, 312, 318, 351, 687, 1371, 1485, 1557
ZraI GACGTC 1 cut(s) 148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.