FvH4_4g21422

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000147
Physical Location & Seq
Reverse (-)
24496978 .. 24498178
1201 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g21422.t1

Sequence Viewer

Length: 1026 bp
ATGGAACTTTATAGGAAAGCCAAGACAAGCACTAAACTCAGACACTTTGTCAAGTTTGGGGGCACAAATAGTACTAGTGGGCAGTACTTAAACTCAGGAACTCCTCATACTGATGAGTCAATTGGAGGTGATCTCCTCCAAGGCGGTGGTGACTGGCCAACAGCCTCAAGAATCTTTGTTAATCCAATAGGTACCAAAGGAGGTTTGGCTCTATCGTGGAGTGATTGTGTTTCAGTTCAAGTACTCTCAAAATTTGTAAACCTCATTGACACAATTGTCACGTTCAAATCAGATGGGTCCAGTGTCAGGGTGTCTTGGTTTTATGGTCCACCGAAGAAGGAAAATAAACCAGCATTCTGGAATAGCATAATGAGTCTTGAAGGAGCTATCAACTTGCCCTGGATTTGCTTAGAAGACTTTAATGAATTCATCTGGCCTCATGAAAAAGAAAGGGGAAATCCTTGGAATCCAGGCAAAAGAAAATACCTAAGAGAGTTTATGCAAGCTAACAATCTAATTGATATCCAGTTTAAGGGGCAGCAATTCACATGGAGCAACAATTGGCCAAATGGGGAACTAATAAAAATCAAGCTTGATCGAAGTGTTGTTAATGCTAATTGGCTTGAGCGATGGCCTGCCTCATGCATTTTTCATTTCCCTATGATTGGCTTTGATCACTGCCCACTAGTTATTGACACTGATCCCCCAAGTAAGAAAGGTCCTAAGCCTTTCAAATTTGAGCCTAGTTGGATTGAAGATCCTGAGTGCTTGGATATTATCTTAGAAGCATGGTCTAATCAATCTGCAGACAATCTTGCACAACAACAATGGACAACAAATCTCCATCAGTGCAATAAAAGCTTAAAGCAATGGAGCAAAAAGTTTTCAAACAATAGAAGAGAGATCGATTCCAATATTGAGAAGCTTCAAGTTTTACAGCAAAGTCCCAATCCGGAAGCCGGTCAGCTTGCTACCAATGTCACCGATAAACTTGCATCCCTTTGGGACAAAAAGGAAAAGTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

342

Amino Acids

39.0

Weight (kDa)

8.41

Isoelectric Point (pI)

36.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000147)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10354 FvH4_1g17131 FvH4_2g11611 FvH4_2g33851 FvH4_3g32112 FvH4_3g35052 FvH4_3g44611 FvH4_4g05921 FvH4_4g06411 FvH4_4g06792 FvH4_4g10365 FvH4_4g21422 FvH4_4g22401 FvH4_4g30261 FvH4_5g08843 FvH4_5g14731 FvH4_5g24781 FvH4_5g26231 FvH4_5g31282 FvH4_6g23371 FvH4_6g38511 FvH4_7g01171 FvH4_7g03341 FvH4_7g06171 FvH4_7g32472
prunus_persica Prupe.2G036900_v2.0.a1
pyrus_communis pycom02g19900 pycom03g01520 pycom05g10510 pycom16g23820
rosa_chinensis RchiOBHm_Chr1g0316031 RchiOBHm_Chr1g0342451 RchiOBHm_Chr1g0344541 RchiOBHm_Chr1g0364721 RchiOBHm_Chr2g0133541 RchiOBHm_Chr2g0134511 RchiOBHm_Chr2g0145891 RchiOBHm_Chr2g0163241 RchiOBHm_Chr5g0027201 RchiOBHm_Chr5g0027881 RchiOBHm_Chr5g0047471 RchiOBHm_Chr7g0210901
rosa_laevigata RLG00000011116 RLG00000017964 RLG00000018128 RLG00000018387 RLG00000018829 RLG00000019353 RLG00000028973 RLG00000035870 RLG00000036629
rosa_multiflora Rmu_co8126340.1_g000001 Rmu_co8216750.1_g000001 Rmu_co8222072.1_g000001 Rmu_co8332453.1_g000001 Rmu_co8349913.1_g000001 Rmu_co8405337.1_g000001 Rmu_sc0000041.1_g000012 Rmu_sc0000166.1_g000029 Rmu_sc0000251.1_g000019 Rmu_sc0000271.1_g000028 Rmu_sc0000509.1_g000036 Rmu_sc0000543.1_g000048 Rmu_sc0000808.1_g000003 Rmu_sc0000847.1_g000040 Rmu_sc0000972.1_g000020 Rmu_sc0001260.1_g000001 Rmu_sc0001464.1_g000026 Rmu_sc0001616.1_g000003 Rmu_sc0001669.1_g000001 Rmu_sc0002005.1_g000001 Rmu_sc0002014.1_g000010 Rmu_sc0002082.1_g000033 Rmu_sc0002302.1_g000024 Rmu_sc0002531.1_g000045 Rmu_sc0003276.1_g000002 Rmu_sc0003737.1_g000007 Rmu_sc0003832.1_g000022 Rmu_sc0004080.1_g000011 Rmu_sc0004487.1_g000009 Rmu_sc0004988.1_g000018 Rmu_sc0004988.1_g000019 Rmu_sc0005254.1_g000002 Rmu_sc0005733.1_g000004 Rmu_sc0006413.1_g000006 Rmu_sc0007121.1_g000013 Rmu_sc0007869.1_g000006 Rmu_sc0008035.1_g000015 Rmu_sc0008279.1_g000017 Rmu_sc0008351.1_g000014 Rmu_sc0008957.1_g000007 Rmu_sc0009012.1_g000007 Rmu_sc0010556.1_g000009 Rmu_sc0012889.1_g000003 Rmu_sc0019808.1_g000004 Rmu_sc0028113.1_g000001 Rmu_sc0031202.1_g000001 Rmu_sc0034436.1_g000001 Rmu_sc0034445.1_g000001 Rmu_sc0040044.1_g000001 Rmu_ssc0000062.1_g000032 Rmu_ssc0000372.1_g000018
rosa_roxburghii Rroxscaffold_1G00001520 Rroxscaffold_1G00039990 Rroxscaffold_1G00046370 Rroxscaffold_2G00110140 Rroxscaffold_2G00131420 Rroxscaffold_3G00222390 Rroxscaffold_5G00336040 Rroxscaffold_5G00338000 Rroxscaffold_5G00344030 Rroxscaffold_5G00363460 Rroxscaffold_6G00402000 Rroxscaffold_7G00194940
rosa_rugosa Rorug01G0106500 Rorug01G0111300 Rorug01G0247000 Rorug02G0318100.1 Rorug02G0318200 Rorug02G0459500 Rorug03G0108100 Rorug03G0200500 Rorug03G0232500 Rorug03G0240600 Rorug04G0105300 Rorug04G0256600 Rorug06G0079300 Rorug06G0082700 Rorug06G0095600 Rorug06G0179000 Rorug07G0113500 Rorug07G0271100
rosa_samantha Rh1AG087200 Rh1CG085300 Rh1DG013200 Rh1DG091700 Rh1DG091800 Rh1DG338300 Rh2AG375400 Rh2AG407000 Rh2AG513500 Rh2BG277700 Rh2BG371200 Rh2BG376100 Rh2BG580500 Rh2CG354300 Rh2DG200100 Rh2DG388000 Rh2DG393500 Rh2DG426400 Rh3CG304800 Rh4AG044600 Rh4AG220500 Rh4BG379300 Rh4CG007100 Rh4CG030300 Rh4CG038000 Rh4CG114900 Rh4CG393700 Rh5AG124900 Rh5AG342300 Rh5BG414400 Rh5CG263800 Rh5CG439000 Rh5DG231100 Rh5DG566900 Rh6AG138600 Rh6AG200000 Rh6AG253100 Rh6AG390900 Rh6AG441600 Rh6BG194700 Rh6BG225800 Rh6BG256100 Rh6CG231700 Rh6CG231900 Rh6CG312200 Rh6CG453700 Rh6DG219400 Rh7AG357700 Rh7AG442000 Rh7CG425700 Rh7CG474600 Rh7CG494100 Rh7DG253900 Rh7DG294700 Rh7DG401600 Rh7DG461300
rosa_wichuraiana Rw1G001190 Rw2G047020 Rw4G003490 Rw5G039690 Rw6G010450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 275
Acc65I GGTACC 1 cut(s) 191
AccB1I GGYRCC 1 cut(s) 191
AccIII TCCGGA 1 cut(s) 952
AciI CCGC 1 cut(s) 144
AclWI GGATC 2 cut(s) 695, 752
AcoI YGGCCR 2 cut(s) 155, 563
AcsI RAATTY 3 cut(s) 251, 425, 734
AfaI GTAC 4 cut(s) 73, 86, 193, 243
AfiI CCNNNNNNNGG 4 cut(s) 306, 532, 665, 959
AgsI TTSAA 7 cut(s) 239, 286, 380, 733, 755, 888, 929
AhdI GACNNNNNGTC 1 cut(s) 47
AhlI ACTAGT 2 cut(s) 74, 685
AjnI CCWGG 2 cut(s) 398, 469
AluBI AGCT 6 cut(s) 386, 506, 592, 861, 925, 967
AluI AGCT 6 cut(s) 386, 506, 592, 861, 925, 967
AlwI GGATC 2 cut(s) 695, 752
Aor13HI TCCGGA 1 cut(s) 952
AoxI GGCC 4 cut(s) 155, 434, 563, 632
ApeKI GCWGC 1 cut(s) 538
ApoI RAATTY 3 cut(s) 251, 425, 734
Asp718I GGTACC 1 cut(s) 191
AspS9I GGNCC 3 cut(s) 297, 326, 719
AsuHPI GGTGA 3 cut(s) 140, 161, 973
AvaII GGWCC 3 cut(s) 297, 326, 719
BaeGI GKGCMC 1 cut(s) 65
BalI TGGCCA 2 cut(s) 157, 565
BanI GGYRCC 1 cut(s) 191
BbsI GAAGAC 1 cut(s) 420
BbvI GCAGC 1 cut(s) 550
BccI CCATC 3 cut(s) 287, 624, 852
BcgI CGANNNNNNTGC 2 cut(s) 974, 1008
BciT130I CCWGG 2 cut(s) 400, 471
BclI TGATCA 1 cut(s) 673
BcuI ACTAGT 2 cut(s) 74, 685
BfaI CTAG 3 cut(s) 75, 686, 744
BfmI CTRYAG 1 cut(s) 804
BisI GCNGC 1 cut(s) 539
BlsI GCNGC 1 cut(s) 540
BmcAI AGTACT 3 cut(s) 73, 86, 243
Bme1390I CCNGG 2 cut(s) 400, 471
Bme18I GGWCC 3 cut(s) 297, 326, 719
BmeRI GACNNNNNGTC 1 cut(s) 47
BmgT120I GGNCC 3 cut(s) 297, 326, 719
BmiI GGNNCC 2 cut(s) 193, 298
BmrFI CCNGG 2 cut(s) 400, 471
BmsI GCATC 1 cut(s) 1004
BpiI GAAGAC 1 cut(s) 420
BplI GAGNNNNNCTC 2 cut(s) 117, 149
Bpu10I CCTNAGC 1 cut(s) 723
BpuEI CTTGAG 2 cut(s) 151, 644
Bsa29I ATCGAT 1 cut(s) 906
BsaJI CCNNGG 3 cut(s) 139, 398, 461
BsaWI WCCGGW 1 cut(s) 952
BsaXI ACNNNNNCTCC 2 cut(s) 211, 241
Bsc4I CCNNNNNNNGG 4 cut(s) 306, 532, 665, 959
Bse118I RCCGGY 1 cut(s) 959
Bse1I ACTGG 3 cut(s) 158, 300, 526
Bse3DI GCAATG 1 cut(s) 875
BseAI TCCGGA 1 cut(s) 952
BseBI CCWGG 2 cut(s) 400, 471
BseCI ATCGAT 1 cut(s) 906
BseDI CCNNGG 3 cut(s) 139, 398, 461
BseGI GGATG 1 cut(s) 995
BseLI CCNNNNNNNGG 4 cut(s) 306, 532, 665, 959
BseMI GCAATG 1 cut(s) 875
BseMII CTCAG 3 cut(s) 52, 108, 753
BseNI ACTGG 3 cut(s) 158, 300, 526
BseRI GAGGAG 2 cut(s) 93, 125
BseSI GKGCMC 1 cut(s) 65
BseXI GCAGC 1 cut(s) 550
BshFI GGCC 4 cut(s) 157, 436, 565, 634
BshNI GGYRCC 1 cut(s) 191
BshVI ATCGAT 1 cut(s) 906
BsiSI CCGG 2 cut(s) 953, 960
BslFI GGGAC 2 cut(s) 930, 1019
BslI CCNNNNNNNGG 4 cut(s) 306, 532, 665, 959
BsmFI GGGAC 2 cut(s) 930, 1019
BsmI GAATGC 1 cut(s) 353
BsnI GGCC 4 cut(s) 157, 436, 565, 634
Bsp1286I GDGCHC 1 cut(s) 65
Bsp13I TCCGGA 1 cut(s) 952
Bsp143I GATC 6 cut(s) 130, 595, 673, 700, 757, 903
BspACI CCGC 1 cut(s) 144
BspANI GGCC 4 cut(s) 157, 436, 565, 634
BspCNI CTCAG 3 cut(s) 51, 107, 754
BspDI ATCGAT 1 cut(s) 906
BspEI TCCGGA 1 cut(s) 952
BspHI TCATGA 1 cut(s) 439
BspLI GGNNCC 2 cut(s) 193, 298
BspMAI CTGCAG 1 cut(s) 808
BspPI GGATC 2 cut(s) 695, 752
BspT107I GGYRCC 1 cut(s) 191
BsrDI GCAATG 1 cut(s) 875
BsrFI RCCGGY 1 cut(s) 959
BsrI ACTGG 3 cut(s) 158, 300, 526
BssAI RCCGGY 1 cut(s) 959
BssECI CCNNGG 3 cut(s) 139, 398, 461
BssMI GATC 6 cut(s) 130, 595, 673, 700, 757, 903
BssT1I CCWWGG 2 cut(s) 139, 461
Bst2UI CCWGG 2 cut(s) 400, 471
Bst6I CTCTTC 1 cut(s) 892
BstC8I GCNNGC 3 cut(s) 504, 636, 969
BstDEI CTNAG 7 cut(s) 38, 94, 409, 488, 723, 762, 781
BstF5I GGATG 1 cut(s) 995
BstKTI GATC 6 cut(s) 133, 598, 676, 703, 760, 906
BstMBI GATC 6 cut(s) 130, 595, 673, 700, 757, 903
BstMWI GCNNNNNNNGC 1 cut(s) 858
BstNI CCWGG 2 cut(s) 400, 471
BstSCI CCNGG 2 cut(s) 398, 469
BstSFI CTRYAG 1 cut(s) 804
BstSLI GKGCMC 1 cut(s) 65
BstV1I GCAGC 1 cut(s) 550
BstV2I GAAGAC 1 cut(s) 420
BstX2I RGATCY 1 cut(s) 757
BstXI CCANNNNNNTGG 2 cut(s) 146, 357
BstYI RGATCY 1 cut(s) 757
Bsu15I ATCGAT 1 cut(s) 906
BsuRI GGCC 4 cut(s) 157, 436, 565, 634
BsuTUI ATCGAT 1 cut(s) 906
BtgZI GCGATG 1 cut(s) 643
BtsCI GGATG 1 cut(s) 995
BtsI GCAGTG 1 cut(s) 676
BtsIMutI CAGTG 4 cut(s) 307, 676, 696, 854
Cac8I GCNNGC 3 cut(s) 504, 636, 969
CciI TCATGA 1 cut(s) 439
Cfr10I RCCGGY 1 cut(s) 959
Cfr13I GGNCC 3 cut(s) 297, 326, 719
ClaI ATCGAT 1 cut(s) 906
Csp6I GTAC 4 cut(s) 72, 85, 192, 242
CviAII CATG 4 cut(s) 440, 549, 642, 789
CviQI GTAC 4 cut(s) 72, 85, 192, 242
DdeI CTNAG 7 cut(s) 38, 94, 409, 488, 723, 762, 781
DpnI GATC 6 cut(s) 132, 597, 675, 702, 759, 905
DpnII GATC 6 cut(s) 130, 595, 673, 700, 757, 903
DrdI GACNNNNNNGTC 1 cut(s) 275
DriI GACNNNNNGTC 1 cut(s) 47
DseDI GACNNNNNNGTC 1 cut(s) 275
EaeI YGGCCR 2 cut(s) 155, 563
Eam1104I CTCTTC 1 cut(s) 892
Eam1105I GACNNNNNGTC 1 cut(s) 47
EarI CTCTTC 1 cut(s) 892
Eco130I CCWWGG 2 cut(s) 139, 461
Eco32I GATATC 1 cut(s) 523
Eco47I GGWCC 3 cut(s) 297, 326, 719
EcoO109I RGGNCCY 1 cut(s) 719
EcoRI GAATTC 1 cut(s) 425
EcoRII CCWGG 2 cut(s) 398, 469
EcoRV GATATC 1 cut(s) 523
EcoT14I CCWWGG 2 cut(s) 139, 461
EcoT22I ATGCAT 1 cut(s) 647
ErhI CCWWGG 2 cut(s) 139, 461
FaeI CATG 4 cut(s) 443, 552, 645, 792
FaqI GGGAC 2 cut(s) 930, 1019
FatI CATG 4 cut(s) 439, 548, 641, 788
FbaI TGATCA 1 cut(s) 673
Fnu4HI GCNGC 1 cut(s) 539
FokI GGATG 1 cut(s) 982
Fsp4HI GCNGC 1 cut(s) 539
FspBI CTAG 3 cut(s) 75, 686, 744
GluI GCNGC 1 cut(s) 539
HaeIII GGCC 4 cut(s) 157, 436, 565, 634
HapII CCGG 2 cut(s) 953, 960
Hin1II CATG 4 cut(s) 443, 552, 645, 792
HindIII AAGCTT 3 cut(s) 590, 859, 923
HinfI GANTC 5 cut(s) 116, 171, 373, 466, 908
HpaII CCGG 2 cut(s) 953, 960
HphI GGTGA 3 cut(s) 140, 161, 973
Hpy166II GTNNAC 2 cut(s) 259, 329
Hpy188I TCNGA 2 cut(s) 41, 292
Hpy188III TCNNGA 7 cut(s) 96, 168, 358, 377, 440, 761, 953
Hpy8I GTNNAC 2 cut(s) 259, 329
HpyAV CCTTC 2 cut(s) 331, 374
HpyCH4IV ACGT 1 cut(s) 281
HpyCH4V TGCA 6 cut(s) 502, 645, 806, 818, 852, 995
HpyF10VI GCNNNNNNNGC 1 cut(s) 858
HpyF3I CTNAG 7 cut(s) 38, 94, 409, 488, 723, 762, 781
HpySE526I ACGT 1 cut(s) 281
Hsp92II CATG 4 cut(s) 443, 552, 645, 792
Kpn2I TCCGGA 1 cut(s) 952
KpnI GGTACC 1 cut(s) 195
Ksp22I TGATCA 1 cut(s) 673
Kzo9I GATC 6 cut(s) 130, 595, 673, 700, 757, 903
LmnI GCTCC 3 cut(s) 383, 552, 873
Lsp1109I GCAGC 1 cut(s) 550
LweI GCATC 1 cut(s) 1004
MaeI CTAG 3 cut(s) 75, 686, 744
MaeII ACGT 1 cut(s) 281
MaeIII GTNAC 3 cut(s) 149, 277, 979
MalI GATC 6 cut(s) 132, 597, 675, 702, 759, 905
MboI GATC 6 cut(s) 130, 595, 673, 700, 757, 903
MboII GAAGA 4 cut(s) 346, 425, 767, 909
MfeI CAATTG 3 cut(s) 120, 273, 559
MflI RGATCY 1 cut(s) 757
MhlI GDGCHC 1 cut(s) 65
MlsI TGGCCA 2 cut(s) 157, 565
MluCI AATT 9 cut(s) 120, 251, 273, 425, 516, 542, 559, 616, 734
MluNI TGGCCA 2 cut(s) 157, 565
MlyI GAGTC 2 cut(s) 125, 382
MmeI TCCRAC 1 cut(s) 728
MnlI CCTC 8 cut(s) 114, 119, 146, 175, 194, 272, 447, 649
Mox20I TGGCCA 2 cut(s) 157, 565
Mph1103I ATGCAT 1 cut(s) 647
MroI TCCGGA 1 cut(s) 952
MscI TGGCCA 2 cut(s) 157, 565
MseI TTAA 6 cut(s) 89, 180, 420, 531, 609, 863
MslI CAYNNNNRTG 1 cut(s) 111
Msp20I TGGCCA 2 cut(s) 157, 565
MspI CCGG 2 cut(s) 953, 960
MspR9I CCNGG 2 cut(s) 400, 471
MunI CAATTG 3 cut(s) 120, 273, 559
Mva1269I GAATGC 1 cut(s) 353
MvaI CCWGG 2 cut(s) 400, 471
MwoI GCNNNNNNNGC 1 cut(s) 858
NdeII GATC 6 cut(s) 130, 595, 673, 700, 757, 903
NlaIII CATG 4 cut(s) 443, 552, 645, 792
NlaIV GGNNCC 2 cut(s) 193, 298
NmuCI GTSAC 3 cut(s) 149, 277, 979
NsiI ATGCAT 1 cut(s) 647
PagI TCATGA 1 cut(s) 439
PctI GAATGC 1 cut(s) 353
PfeI GAWTC 3 cut(s) 171, 466, 908
PkrI GCNGC 1 cut(s) 540
PleI GAGTC 2 cut(s) 124, 381
PpsI GAGTC 2 cut(s) 124, 381
PpuMI RGGWCCY 1 cut(s) 719
Psp5II RGGWCCY 1 cut(s) 719
Psp6I CCWGG 2 cut(s) 398, 469
PspGI CCWGG 2 cut(s) 398, 469
PspN4I GGNNCC 2 cut(s) 193, 298
PspPI GGNCC 3 cut(s) 297, 326, 719
PspPPI RGGWCCY 1 cut(s) 719
PsrI GAACNNNNNNTAC 2 cut(s) 91, 123
PstI CTGCAG 1 cut(s) 808
PsuI RGATCY 1 cut(s) 757
RsaI GTAC 4 cut(s) 73, 86, 193, 243
RsaNI GTAC 4 cut(s) 72, 85, 192, 242
RseI CAYNNNNRTG 1 cut(s) 111
SaqAI TTAA 6 cut(s) 89, 180, 420, 531, 609, 863
SatI GCNGC 1 cut(s) 539
Sau3AI GATC 6 cut(s) 130, 595, 673, 700, 757, 903
Sau96I GGNCC 3 cut(s) 297, 326, 719
ScaI AGTACT 3 cut(s) 73, 86, 243
SchI GAGTC 2 cut(s) 125, 382
ScrFI CCNGG 2 cut(s) 400, 471
SduI GDGCHC 1 cut(s) 65
SfaNI GCATC 1 cut(s) 1004
SfcI CTRYAG 1 cut(s) 804
SinI GGWCC 3 cut(s) 297, 326, 719
SmiMI CAYNNNNRTG 1 cut(s) 111
SmlI CTYRAG 2 cut(s) 166, 623
SmoI CTYRAG 2 cut(s) 166, 623
SpeI ACTAGT 2 cut(s) 74, 685
Sse9I AATT 9 cut(s) 120, 251, 273, 425, 516, 542, 559, 616, 734
SsiI CCGC 1 cut(s) 144
SspI AATATT 1 cut(s) 916
SspMI CTAG 3 cut(s) 75, 686, 744
StyD4I CCNGG 2 cut(s) 398, 469
StyI CCWWGG 2 cut(s) 139, 461
TaiI ACGT 1 cut(s) 284
TaqI TCGA 2 cut(s) 598, 906
TasI AATT 9 cut(s) 120, 251, 273, 425, 516, 542, 559, 616, 734
TatI WGTACW 3 cut(s) 71, 84, 241
TfiI GAWTC 3 cut(s) 171, 466, 908
Tru1I TTAA 6 cut(s) 89, 180, 420, 531, 609, 863
Tru9I TTAA 6 cut(s) 89, 180, 420, 531, 609, 863
TscAI CASTG 4 cut(s) 307, 683, 703, 854
TseFI GTSAC 3 cut(s) 149, 277, 979
TseI GCWGC 1 cut(s) 538
Tsp45I GTSAC 3 cut(s) 149, 277, 979
TspDTI ATGAA 4 cut(s) 418, 438, 456, 641
TspRI CASTG 4 cut(s) 307, 683, 703, 854
VpaK11BI GGWCC 3 cut(s) 297, 326, 719
XapI RAATTY 3 cut(s) 251, 425, 734
XcmI CCANNNNNNNNNTGG 1 cut(s) 202
XspI CTAG 3 cut(s) 75, 686, 744
ZrmI AGTACT 3 cut(s) 73, 86, 243
Zsp2I ATGCAT 1 cut(s) 647
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.