FvH4_2g14930

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000110
Physical Location & Seq
Forward (+)
13117315 .. 13119465
2151 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g14930.t1

Sequence Viewer

Length: 2151 bp
ATGAGCTACAGGGAATTGCTAGAGATACTGGTGAACTACTTGGAGTTTAAAAGATATGTTGTTGTTCTGGATGATGTGTGGAATATCCAACTTTTGAGAGAAATAAGGGTATCACTTCAAGATAGATGGCTTGGAAGTCGAGTTCTGCTAACAACTAGAAAAGATGATGTAGCATTAGAGATACTGGTGAACTACTTGGAGTTTAAAAGATATGTTGTTGTTCTGGATGATGTGTGGAATATCCAACTTTTGAGAGAAATAAGGGTATCACTTCAAGATAGATGGCTTGGAAGTCGAGTTCTGCTAACAACTAGAAAAGATGATGTAGCATTCCATTCTTTTGGAGTTGAAAGCCTTGTTCATCGCATTCAACCCTTGGAGAACAATGACTCCGGGGAGCTCTTCAGCAGAAAGGCATTCTTAACTTATCATAATAAGTGTTGTTCAATAGAGCTTGAGCCATTAGCTTGCGAACTAGTGCCAAAGTGTAAAGGCCTACCTTTGGCTATCGTGACTCTAGGTGGTCTTATGTCTTCAAAGAAATCATCTACTGAGTGGAGAGAAGTATGCAACAACTTAACTTGGCATCTTACAAACGATCACTATCTGGAACCGGTGAAGAGCATTTTGTTGCTTAGTTACAATGATTTGCCATACCGTTGGAAGCATTGTTTCTTATATTGTTCCCTCTTCCCTGAAGATCATTTGATCGGAAGATACAGGTTTGTTAGATTGTGGATAGCTGAAGGTTTTATTGAACATGTCAATGGGGTGACACTAGAAGACCTCGCAGAGAGGTACCTTATAGAGCTAACATTTCGCAGCATGTTGCAATTTGTAAAGAAGGATTCTCAATCTAGAATCCCAGAACAGTGCATGATGCATGATCTCATGAGGGAGATTGCTCTATCAACTTCAGAAAGAGAAAAATTTGGTGTTGTATTTGATAGGAGAGGAGTAATGGAAGAAACAAGAGTTCGCCGTTTGGCGATTCATACAACTGAAGGAGACATTGGATCATGCACAGGTATGTTGCACCTTCGCTCATTACTTGTGTTTCCTTCTGGCTTACATTCTCCAATGTTACCGAATACATGGTCTTCTGTGTTCTACTTGTTGAGAGTTCTAGATTTGGAATATGTACCAATTGATAAGCTTCCAAACAATCTAGTGTATTTGTTCAATTTAAGATATTTGAATCTTAGAGGAACTCGGATTAAAAGGCTTCCAAAATACATTGGAAGGCTCCACAACCTTCAAACCTTGGACATCAGTGACACAAACATAAAGATACTTCCTAGTGGAAGTTCACAGTTGATAAACTTGCGCCATCTGTACATGGGACATTTCAATGAGACTGGATTTGAGACTTTCATATGTGCTCGTGGGATTAAAGCGTCATCACATATATCTATGTTCAAGAAGTTGCAAGATTTATTTTTTGTTCAGTCAGATAAAAACATGATCAGACTTCTGAGAAACATGACCCAACTTAGGATGCTTGGCATTACAAATGTAAAAGAAAGTGATGAAATAGAGCTCTGTGCCTCAATTCAGAAGATGAAAATCCTGGTCTGGTTGAATTTATCGGTAAGTGATACCTCGGAGGGATTTCTTCGAATTGATGCACTTTCTTCACCTCCACCATATCTTGAGTCCCTTTTGTTACGTGGTAAACTGGAAATGGTACCATTTTGGTTTCGCTCATTACAGTGCCTCACACATATAGATCTGCTATGGTGTAGACTTGAAGAAGATTTACTGCTTCACATTGAGGCGCTTCCGTGTCTGGAACGTATTCTCCTTGATAATACTTACGTTGGGAAAGAGATGAGTTTCAGTAGAGGCTTTGCAAAGCTCACACATTTGGAGATGTTCAATTTCGGAGTACTGAATACCATAAGTGTAGAAAAAGGGGTGATGCCAAATCTCCAATACCTGGGACTTCGAAATTGCAAAAAATTGAAGACATTGCCTCATGGTCTTGAAAACCTTACTCGTCTTGAAAAATTGTATTTGGAGTCTGTTACAAGGAAACTCGTAGAGTCCATACGAGAAGGAGGTGTAGATCGTCCAAAGGTACAACATATCCAAATAATCGACCATCATTACAGAACATCTTCTGGGTTGTCTTACGAAAGCTTGTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

717

Amino Acids

83.52

Weight (kDa)

8.44

Isoelectric Point (pI)

55.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 4 - 58 4.8e-12 NB-ARC domain
NB-ARC PF00931 62 - 140 4.4e-16 NB-ARC domain
WHD_DRP PF23559 230 - 302 1e-19 Disease resistance protein Winged helix domain
LRR_14 PF23598 346 - 674 1.8e-41 Leucine-rich repeat region
LRR_4 PF12799 395 - 428 9.3e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 395 - 449 2e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 798, 1687
AccB1I GGYRCC 2 cut(s) 798, 1687
AccB7I CCANNNNNTGG 1 cut(s) 1939
AccI GTMKAC 1 cut(s) 1744
AclWI GGATC 1 cut(s) 1024
AcsI RAATTY 2 cut(s) 929, 1582
AcuI CTGAAG 5 cut(s) 388, 717, 765, 900, 1023
AfaI GTAC 6 cut(s) 800, 1143, 1337, 1689, 1890, 2082
AfiI CCNNNNNNNGG 3 cut(s) 502, 1494, 1939
AflIII ACRYGT 1 cut(s) 760
AgeI ACCGGT 1 cut(s) 613
AhlI ACTAGT 1 cut(s) 475
AjnI CCWGG 2 cut(s) 1569, 1938
AjuI GAANNNNNNNTTGG 2 cut(s) 996, 1028
AloI GAACNNNNNNTCC 8 cut(s) 126, 158, 282, 314, 374, 406, 1785, 1817
Alw21I GWGCWC 3 cut(s) 402, 1384, 1542
Alw26I GTCTC 3 cut(s) 1002, 1349, 1361
AlwI GGATC 1 cut(s) 1024
AoxI GGCC 1 cut(s) 493
ApeKI GCWGC 1 cut(s) 822
ApoI RAATTY 2 cut(s) 929, 1582
ArsI GACNNNNNNTTYG 2 cut(s) 1082, 1114
AsiGI ACCGGT 1 cut(s) 613
Asp700I GAANNNNTTC 2 cut(s) 1797, 2119
Asp718I GGTACC 2 cut(s) 798, 1687
AspLEI GCGC 2 cut(s) 1329, 1780
AsuC2I CCSGG 1 cut(s) 394
AsuHPI GGTGA 6 cut(s) 43, 199, 628, 784, 1629, 1930
AsuII TTCGAA 2 cut(s) 1618, 1948
BanI GGYRCC 2 cut(s) 798, 1687
BanII GRGCYC 2 cut(s) 402, 1542
BarI GAAGNNNNNNTAC 2 cut(s) 1743, 1775
BauI CACGAG 1 cut(s) 1383
BbsI GAAGAC 4 cut(s) 525, 789, 1092, 1973
Bbv12I GWGCWC 3 cut(s) 402, 1384, 1542
BbvI GCAGC 1 cut(s) 834
BccI CCATC 4 cut(s) 120, 276, 1338, 2112
BceAI ACGGC 1 cut(s) 966
BciT130I CCWGG 2 cut(s) 1571, 1940
BclI TGATCA 1 cut(s) 1464
BcnI CCSGG 1 cut(s) 394
BcoDI GTCTC 3 cut(s) 1002, 1349, 1361
BcuI ACTAGT 1 cut(s) 475
BfmI CTRYAG 1 cut(s) 7
BfoI RGCGCY 1 cut(s) 1781
BglII AGATCT 1 cut(s) 1729
BisI GCNGC 1 cut(s) 823
BlsI GCNGC 1 cut(s) 824
BmcAI AGTACT 1 cut(s) 1890
Bme1390I CCNGG 3 cut(s) 394, 1571, 1940
BmiI GGNNCC 4 cut(s) 612, 800, 1247, 1689
BmrFI CCNGG 3 cut(s) 394, 1571, 1940
BmsI GCATC 5 cut(s) 595, 870, 1488, 1615, 1911
BpiI GAAGAC 4 cut(s) 525, 789, 1092, 1973
Bpu14I TTCGAA 2 cut(s) 1618, 1948
BpuEI CTTGAG 2 cut(s) 476, 1673
BpuMI CCSGG 1 cut(s) 394
BsaAI YACGTR 1 cut(s) 1670
BsaBI GATNNNNATC 2 cut(s) 603, 1565
BsaJI CCNNGG 5 cut(s) 375, 393, 1263, 1602, 1939
BsaWI WCCGGW 1 cut(s) 613
BsaXI ACNNNNNCTCC 4 cut(s) 374, 404, 1785, 1815
Bsc4I CCNNNNNNNGG 3 cut(s) 502, 1494, 1939
Bse118I RCCGGY 1 cut(s) 613
Bse1I ACTGG 4 cut(s) 33, 189, 1363, 1683
Bse3DI GCAATG 1 cut(s) 1970
Bse8I GATNNNNATC 2 cut(s) 603, 1565
BseBI CCWGG 2 cut(s) 1571, 1940
BseDI CCNNGG 5 cut(s) 375, 393, 1263, 1602, 1939
BseGI GGATG 3 cut(s) 76, 232, 1503
BseJI GATNNNNATC 2 cut(s) 603, 1565
BseLI CCNNNNNNNGG 3 cut(s) 502, 1494, 1939
BseMI GCAATG 1 cut(s) 1970
BseMII CTCAG 2 cut(s) 543, 1466
BseNI ACTGG 4 cut(s) 33, 189, 1363, 1683
BseRI GAGGAG 1 cut(s) 969
BseXI GCAGC 1 cut(s) 834
BshFI GGCC 1 cut(s) 495
BshNI GGYRCC 2 cut(s) 798, 1687
BshTI ACCGGT 1 cut(s) 613
BsiHKAI GWGCWC 3 cut(s) 402, 1384, 1542
BsiSI CCGG 2 cut(s) 393, 614
BslFI GGGAC 3 cut(s) 1356, 1642, 1956
BslI CCNNNNNNNGG 3 cut(s) 502, 1494, 1939
BsmAI GTCTC 3 cut(s) 1002, 1349, 1361
BsmFI GGGAC 3 cut(s) 1356, 1642, 1956
BsmI GAATGC 3 cut(s) 329, 366, 416
BsnI GGCC 1 cut(s) 495
Bsp119I TTCGAA 2 cut(s) 1618, 1948
Bsp1286I GDGCHC 3 cut(s) 402, 1384, 1542
Bsp1407I TGTACA 1 cut(s) 1335
Bsp143I GATC 8 cut(s) 598, 700, 708, 886, 1016, 1464, 1729, 2068
BspANI GGCC 1 cut(s) 495
BspCNI CTCAG 2 cut(s) 544, 1467
BspHI TCATGA 1 cut(s) 891
BspLI GGNNCC 4 cut(s) 612, 800, 1247, 1689
BspPI GGATC 1 cut(s) 1024
BspQI GCTCTTC 2 cut(s) 407, 614
BspT104I TTCGAA 2 cut(s) 1618, 1948
BspT107I GGYRCC 2 cut(s) 798, 1687
BsrDI GCAATG 1 cut(s) 1970
BsrFI RCCGGY 1 cut(s) 613
BsrGI TGTACA 1 cut(s) 1335
BsrI ACTGG 4 cut(s) 33, 189, 1363, 1683
BssAI RCCGGY 1 cut(s) 613
BssECI CCNNGG 5 cut(s) 375, 393, 1263, 1602, 1939
BssMI GATC 8 cut(s) 598, 700, 708, 886, 1016, 1464, 1729, 2068
BssSI CACGAG 1 cut(s) 1383
BssT1I CCWWGG 2 cut(s) 375, 1263
Bst2BI CACGAG 1 cut(s) 1383
Bst2UI CCWGG 2 cut(s) 1571, 1940
Bst4CI ACNGT 4 cut(s) 659, 873, 1314, 1713
Bst6I CTCTTC 3 cut(s) 407, 614, 695
BstAUI TGTACA 1 cut(s) 1335
BstBAI YACGTR 1 cut(s) 1670
BstBI TTCGAA 2 cut(s) 1618, 1948
BstC8I GCNNGC 1 cut(s) 469
BstDEI CTNAG 5 cut(s) 552, 635, 1202, 1475, 1493
BstF5I GGATG 3 cut(s) 76, 232, 1503
BstH2I RGCGCY 1 cut(s) 1781
BstHHI GCGC 2 cut(s) 1329, 1780
BstKTI GATC 8 cut(s) 601, 703, 711, 889, 1019, 1467, 1732, 2071
BstMAI GTCTC 3 cut(s) 1002, 1349, 1361
BstMBI GATC 8 cut(s) 598, 700, 708, 886, 1016, 1464, 1729, 2068
BstNI CCWGG 2 cut(s) 1571, 1940
BstNSI RCATGY 2 cut(s) 764, 829
BstSCI CCNGG 3 cut(s) 392, 1569, 1938
BstSFI CTRYAG 1 cut(s) 7
BstV1I GCAGC 1 cut(s) 834
BstV2I GAAGAC 4 cut(s) 525, 789, 1092, 1973
BstX2I RGATCY 1 cut(s) 1729
BstXI CCANNNNNNTGG 2 cut(s) 341, 660
BstYI RGATCY 1 cut(s) 1729
BsuRI GGCC 1 cut(s) 495
BtgZI GCGATG 1 cut(s) 347
BtsCI GGATG 3 cut(s) 76, 232, 1503
BtsIMutI CAGTG 3 cut(s) 878, 1279, 1718
Cac8I GCNNGC 1 cut(s) 469
CciI TCATGA 1 cut(s) 891
CfoI GCGC 2 cut(s) 1329, 1780
Cfr10I RCCGGY 1 cut(s) 613
CseI GACGC 1 cut(s) 1386
Csp6I GTAC 6 cut(s) 799, 1142, 1336, 1688, 1889, 2081
CspAI ACCGGT 1 cut(s) 613
CviQI GTAC 6 cut(s) 799, 1142, 1336, 1688, 1889, 2081
DdeI CTNAG 5 cut(s) 552, 635, 1202, 1475, 1493
DpnI GATC 8 cut(s) 600, 702, 710, 888, 1018, 1466, 1731, 2070
DpnII GATC 8 cut(s) 598, 700, 708, 886, 1016, 1464, 1729, 2068
DraI TTTAAA 2 cut(s) 49, 205
Eam1104I CTCTTC 3 cut(s) 407, 614, 695
EarI CTCTTC 3 cut(s) 407, 614, 695
Ecl136II GAGCTC 2 cut(s) 400, 1540
Eco130I CCWWGG 2 cut(s) 375, 1263
Eco147I AGGCCT 1 cut(s) 495
Eco24I GRGCYC 2 cut(s) 402, 1542
Eco53kI GAGCTC 2 cut(s) 400, 1540
Eco57I CTGAAG 5 cut(s) 388, 717, 765, 900, 1023
EcoICRI GAGCTC 2 cut(s) 400, 1540
EcoRII CCWGG 2 cut(s) 1569, 1938
EcoT14I CCWWGG 2 cut(s) 375, 1263
EcoT22I ATGCAT 1 cut(s) 885
EcoT38I GRGCYC 2 cut(s) 402, 1542
ErhI CCWWGG 2 cut(s) 375, 1263
FalI AAGNNNNNCTT 2 cut(s) 404, 436
FaqI GGGAC 3 cut(s) 1356, 1642, 1956
FauNDI CATATG 1 cut(s) 1376
FbaI TGATCA 1 cut(s) 1464
FblI GTMKAC 1 cut(s) 1744
Fnu4HI GCNGC 1 cut(s) 823
FokI GGATG 3 cut(s) 83, 239, 1510
FriOI GRGCYC 2 cut(s) 402, 1542
Fsp4HI GCNGC 1 cut(s) 823
GlaI GCGC 2 cut(s) 1328, 1779
GluI GCNGC 1 cut(s) 823
HaeII RGCGCY 1 cut(s) 1781
HaeIII GGCC 1 cut(s) 495
HapII CCGG 2 cut(s) 393, 614
HgaI GACGC 1 cut(s) 1386
HhaI GCGC 2 cut(s) 1329, 1780
Hin6I GCGC 2 cut(s) 1327, 1778
HinP1I GCGC 2 cut(s) 1327, 1778
HindIII AAGCTT 2 cut(s) 1154, 2140
HinfI GANTC 9 cut(s) 389, 514, 848, 861, 991, 1198, 1655, 2021, 2045
HpaII CCGG 2 cut(s) 393, 614
HphI GGTGA 6 cut(s) 43, 199, 628, 784, 1629, 1930
Hpy166II GTNNAC 5 cut(s) 34, 190, 1310, 1676, 1745
Hpy188I TCNGA 9 cut(s) 713, 919, 1215, 1453, 1469, 1476, 1557, 1606, 1886
Hpy8I GTNNAC 5 cut(s) 34, 190, 1310, 1676, 1745
HpyAV CCTTC 8 cut(s) 740, 838, 998, 1049, 1071, 1236, 1265, 2051
HpyCH4III ACNGT 4 cut(s) 659, 873, 1314, 1713
HpyCH4IV ACGT 3 cut(s) 1669, 1795, 1818
HpyF3I CTNAG 5 cut(s) 552, 635, 1202, 1475, 1493
HpySE526I ACGT 3 cut(s) 1669, 1795, 1818
HspAI GCGC 2 cut(s) 1327, 1778
KpnI GGTACC 2 cut(s) 802, 1691
Ksp22I TGATCA 1 cut(s) 1464
Kzo9I GATC 8 cut(s) 598, 700, 708, 886, 1016, 1464, 1729, 2068
LguI GCTCTTC 2 cut(s) 407, 614
LmnI GCTCC 2 cut(s) 397, 1251
Lsp1109I GCAGC 1 cut(s) 834
LweI GCATC 5 cut(s) 595, 870, 1488, 1615, 1911
MaeII ACGT 3 cut(s) 1669, 1795, 1818
MaeIII GTNAC 7 cut(s) 511, 638, 772, 1083, 1274, 1665, 2026
MalI GATC 8 cut(s) 600, 702, 710, 888, 1018, 1466, 1731, 2070
MboI GATC 8 cut(s) 598, 700, 708, 886, 1016, 1464, 1729, 2068
MfeI CAATTG 1 cut(s) 1146
MflI RGATCY 1 cut(s) 1729
MhlI GDGCHC 3 cut(s) 402, 1384, 1542
MlyI GAGTC 5 cut(s) 383, 508, 1664, 2030, 2054
MmeI TCCRAC 3 cut(s) 112, 268, 641
Mph1103I ATGCAT 1 cut(s) 885
MroXI GAANNNNTTC 2 cut(s) 1797, 2119
MseI TTAA 7 cut(s) 48, 204, 422, 578, 1187, 1218, 1392
MslI CAYNNNNRTG 4 cut(s) 765, 1028, 1350, 1711
MspI CCGG 2 cut(s) 393, 614
MspR9I CCNGG 3 cut(s) 394, 1571, 1940
MunI CAATTG 1 cut(s) 1146
Mva1269I GAATGC 3 cut(s) 329, 366, 416
MvaI CCWGG 2 cut(s) 1571, 1940
NciI CCSGG 1 cut(s) 394
NdeI CATATG 1 cut(s) 1376
NdeII GATC 8 cut(s) 598, 700, 708, 886, 1016, 1464, 1729, 2068
NlaIV GGNNCC 4 cut(s) 612, 800, 1247, 1689
NmuCI GTSAC 3 cut(s) 511, 772, 1274
NsiI ATGCAT 1 cut(s) 885
NspI RCATGY 2 cut(s) 764, 829
NspV TTCGAA 2 cut(s) 1618, 1948
PagI TCATGA 1 cut(s) 891
PceI AGGCCT 1 cut(s) 495
PciI ACATGT 1 cut(s) 760
PciSI GCTCTTC 2 cut(s) 407, 614
PctI GAATGC 3 cut(s) 329, 366, 416
PdmI GAANNNNTTC 2 cut(s) 1797, 2119
PfeI GAWTC 4 cut(s) 848, 861, 991, 1198
PflMI CCANNNNNTGG 1 cut(s) 1939
PinAI ACCGGT 1 cut(s) 613
PkrI GCNGC 1 cut(s) 824
PleI GAGTC 5 cut(s) 383, 508, 1663, 2029, 2053
PpsI GAGTC 5 cut(s) 383, 508, 1663, 2029, 2053
Ppu21I YACGTR 1 cut(s) 1670
PscI ACATGT 1 cut(s) 760
Psp124BI GAGCTC 2 cut(s) 402, 1542
Psp6I CCWGG 2 cut(s) 1569, 1938
PspGI CCWGG 2 cut(s) 1569, 1938
PspN4I GGNNCC 4 cut(s) 612, 800, 1247, 1689
PsuI RGATCY 1 cut(s) 1729
RsaI GTAC 6 cut(s) 800, 1143, 1337, 1689, 1890, 2082
RsaNI GTAC 6 cut(s) 799, 1142, 1336, 1688, 1889, 2081
RseI CAYNNNNRTG 4 cut(s) 765, 1028, 1350, 1711
SacI GAGCTC 2 cut(s) 402, 1542
SapI GCTCTTC 2 cut(s) 407, 614
SaqAI TTAA 7 cut(s) 48, 204, 422, 578, 1187, 1218, 1392
SatI GCNGC 1 cut(s) 823
Sau3AI GATC 8 cut(s) 598, 700, 708, 886, 1016, 1464, 1729, 2068
ScaI AGTACT 1 cut(s) 1890
SchI GAGTC 5 cut(s) 383, 508, 1664, 2030, 2054
ScrFI CCNGG 3 cut(s) 394, 1571, 1940
SduI GDGCHC 3 cut(s) 402, 1384, 1542
SfaNI GCATC 5 cut(s) 595, 870, 1488, 1615, 1911
SfcI CTRYAG 1 cut(s) 7
SfuI TTCGAA 2 cut(s) 1618, 1948
SmiMI CAYNNNNRTG 4 cut(s) 765, 1028, 1350, 1711
SmlI CTYRAG 2 cut(s) 455, 1652
SmoI CTYRAG 2 cut(s) 455, 1652
SpeI ACTAGT 1 cut(s) 475
SseBI AGGCCT 1 cut(s) 495
SstI GAGCTC 2 cut(s) 402, 1542
StuI AGGCCT 1 cut(s) 495
StyD4I CCNGG 3 cut(s) 392, 1569, 1938
StyI CCWWGG 2 cut(s) 375, 1263
TaaI ACNGT 4 cut(s) 659, 873, 1314, 1713
TaiI ACGT 3 cut(s) 1672, 1798, 1821
TaqI TCGA 5 cut(s) 139, 295, 1618, 1948, 2100
TatI WGTACW 2 cut(s) 1335, 1888
TfiI GAWTC 4 cut(s) 848, 861, 991, 1198
Tru1I TTAA 7 cut(s) 48, 204, 422, 578, 1187, 1218, 1392
Tru9I TTAA 7 cut(s) 48, 204, 422, 578, 1187, 1218, 1392
TscAI CASTG 3 cut(s) 878, 1279, 1718
TseFI GTSAC 3 cut(s) 511, 772, 1274
TseI GCWGC 1 cut(s) 822
Tsp45I GTSAC 3 cut(s) 511, 772, 1274
TspDTI ATGAA 5 cut(s) 350, 983, 1363, 1545, 1577
TspGWI ACGGA 1 cut(s) 1773
TspRI CASTG 3 cut(s) 878, 1279, 1718
Van91I CCANNNNNTGG 1 cut(s) 1939
XapI RAATTY 2 cut(s) 929, 1582
XbaI TCTAGA 2 cut(s) 857, 1126
XceI RCATGY 2 cut(s) 764, 829
XmiI GTMKAC 1 cut(s) 1744
XmnI GAANNNNTTC 2 cut(s) 1797, 2119
ZrmI AGTACT 1 cut(s) 1890
Zsp2I ATGCAT 1 cut(s) 885
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.