Prupe.6G199800_v2.0.a1

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000110
Physical Location & Seq
Forward (+)
20686075 .. 20689810
3736 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G199800.3

Sequence Viewer

Length: 2718 bp
ATGGCGTCAGTTTCAGCAGACCTCTTCATTGGCAAATTTGTAGCAATTCTCGAGAGTGAAGCAGCCTCCATAGCGTGTGTTCGTGATCAAGTTGATGAGATTAAGCAGGAGCTGGTATTCATGAAATCCTTCTTAGAGGATGCTGACGGCGGAGAGCAGGCACATACACAAGTAGAGAAAGCGTGGGTCGCAAGCGTTCGAGACTTGGCCAATGATGTTGAAAACACCATTGATGAGTTCATGTATCACGTGTACGAGCAGCGAAATGGCGGTCGATTTGCCAGGTGGATCCACAAAACCATTCACTTTCCAAAGCACCTTTGGTATAAGCGTCAAATAGCCAACAAGTTACAGAAATTCTTGGTGGCGATTAGAGCTATTCCAGAGAGAAATCAGAGATATCGTGGTGCTGCAGCTGTAGAAGGAAAAAGCACTTCTGAGGATATTCGGAGATGGGTGCAGAACCAAGCGGAGTCTTCTCTTTATCAGAAGGAGGATGAACTTGTCGGGATTGAAGGCGATAAGAACACGTTACTGGGATGGCTGATGGATGAAGCGAAGCAGCAAACTGTTGTGTCCGTGGTCGGGATGGGAGGATCAGGGAAGACAACTCTAGTTGCAAGGACCTTCAAAGATGACATTGTAAAGAGACATTTCGAATGCTATGCGTGGATTACTGTTTCCCAGTCTTATGTGATTGAAGACTTACTTAGAAGATTGATCAAAGAATTCCACAAAGCAAAGAAGGAAGAGGTCCCTGCAGACATGAATGCCATGAGTTATAACGAATTGTTGGAGATTTTGGTGAACTACTTGGAGACTAAAAGGTACCTAATTGTATTGGATGACGTGTGGGATGTCCACCTTTGGGACAAAATAAGGTTTTCATTTCCAGATAAACAACTTGGAAGTCGAGTCATGCTTACAACTCGAAGAGAAGACATAGGATCCTCTTCTTTTGGAGTTGAAAGCCATGTTCACAAGATTCGACCGCTGGAAATGGGTGATGCGTGGGAGCTCTTCAGCATGAAAGCATTCTCAAGTTATCAGAACAAATCTTGTTCACCTGAACTTCTGCCATTAGCTCGGGAACTTGTGGAAAAGTGTGAAGGCCTACCACTCGCGATCGTAGCCTTAAGTGGTCTCATGTCTTCGAAGAAGTCACTTAATGATTGGAGCAAAGTCTACAATAGCTTAAATTGGCATCTAACAAACAATTCTTTGTTAGAACCTATGAAGAGCATCTTGTTGCTTAGTTTCAATGATTTGCCATACAGATTGAAGCAGTGCTTTCTATATTGTTCCCTTTTCCCAGAAGATCATGTGATCAGGAATAATAGGCTCATTAGATTGTGGATCGCTGAAGGATTTGTTGAACATGTCAAAGGGGTCACACCAGAAGAAGTTGCAAAGGGCTATCTTATGGAACTCATTTTTCGTAACATGCTACAGGAAAGGTTTGTAATAGCCCACCCAGCATGTAAGATGCATGATCTTTTGCGAGATATTGCTCTGGCTATAGCAAACAAAGATAAGTTTTGCGCTGTACATGATGGAAGTGAAACAGTAGAAGAAACTGGGGCACTCCGTTTGTCAATTCAAACAACTAATGGAGAAATTGGATCATGCACAGGTATATCACGGCTCCGTTCATTTCTCGTCTTTACCACTGGCGTATCCTCATTCTCTTTCTCAAATAAATTACCTTTTGACCTTAAATTGTTGAAGGTTCTAGATTTGGAGGATATCCCAATAGATAATCTGCCAGACGGAGTAACGAGCTTATTCAATTTAAAATATTTAAATTTGAATGGAACTCTAATTAAGGAGCTTCCAGAATCCATTGGACAGCTCCGCAACCTTCAGACCTTGAACATCACGGGGTCAAAAATAGAGGCACTTCCAAGAGGGATTTCCAAGTTGCTAAACTTACGCCATTTACTTGTGGGTGGGTTCATTTCCAGAAAGGTAATTGGGGTAAGAATACCATCAAGTATTAGTAAGATGAAGAAATTGCAATCTTTGTTCTATATTGAATCAGAAGGAAACATTATTAGACTTATTGGAAGTATGACCCAGCTTACTTTCCTTGGCATTACAAATGTGAAAGAAAGAGACGAGGAGGACCTATGTGCCTCAATTCAAGAGATGGAGGTCCTTTCCTGCTTGTATTTATATGTAGCTGATGGAGAGGAATTTCTTCGAGTTGACGCATTGTCTTCACCGCCTCCCTACCTTGATAGACTTAGATTGGTCGGCAAACTGGAAAAGGTTCCACATTGGTTTTGTTCGCTCCACTCTCTCACATACATGCATCTGCAAGGGTCCAGACTTGAAGAAGATATACTACCTCATATTGAAGCATTGCCCTCTCTACTTTATCTTTCCCTTATTAATGCCTCTGTTAGGGAAGAGTTATGTTTCAACAGAGGCTTTGCGAAGCTTCGGCATTTGTGGTTTTATGATCTCGCATTATTAACTAAGATAACTATAGAAAAAGGGGCGATGCCAAATCTCGAGTTCTTAAAGATTCATAGTTGCTTGACATTAGAAACATTGCCACAGGGTATTGAGCACCTTACTAAACTGCAACGATACAGATTTGATAATGTTTCAGAGAAGTTTAGAGAGTCCATAAAAGAAGGAGGTGTGGATCATCCAAGGATGCTACTCGTCGATGAGAGATGTAAGAAATGTACAAACAAGTCCTGGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

906

Amino Acids

103.51

Weight (kDa)

6.52

Isoelectric Point (pI)

49.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 783
Acc65I GGTACC 1 cut(s) 828
AccB1I GGYRCC 1 cut(s) 828
AccI GTMKAC 1 cut(s) 1185
AccII CGCG 1 cut(s) 1124
AciI CCGC 6 cut(s) 150, 270, 470, 992, 1855, 2225
AclWI GGATC 8 cut(s) 283, 296, 604, 942, 955, 1364, 1630, 2661
AcoI YGGCCR 1 cut(s) 207
AcsI RAATTY 5 cut(s) 35, 356, 728, 1804, 2195
AcuI CTGAAG 3 cut(s) 1006, 1383, 1847
AcvI CACGTG 1 cut(s) 250
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 4 cut(s) 254, 830, 1548, 2698
AfiI CCNNNNNNNGG 3 cut(s) 585, 868, 2406
AflII CTTAAG 1 cut(s) 1135
AflIII ACRYGT 4 cut(s) 249, 528, 849, 1378
AhdI GACNNNNNGTC 1 cut(s) 2215
AjiI CACGTC 1 cut(s) 850
AjnI CCWGG 2 cut(s) 281, 2708
AjuI GAANNNNNNNTTGG 2 cut(s) 1897, 1929
Alw21I GWGCWC 2 cut(s) 1020, 2577
Alw26I GTCTC 5 cut(s) 195, 643, 812, 1148, 2109
AlwI GGATC 8 cut(s) 283, 296, 604, 942, 955, 1364, 1630, 2661
AlwNI CAGNNNCTG 1 cut(s) 112
Ama87I CYCGRG 3 cut(s) 50, 1086, 2516
AoxI GGCC 2 cut(s) 207, 1111
ApeKI GCWGC 5 cut(s) 62, 259, 410, 413, 562
ApoI RAATTY 5 cut(s) 35, 356, 728, 1804, 2195
ArsI GACNNNNNNTTYG 2 cut(s) 256, 288
AseI ATTAAT 1 cut(s) 2394
Asp700I GAANNNNTTC 4 cut(s) 128, 1034, 2199, 2271
Asp718I GGTACC 1 cut(s) 828
AspLEI GCGC 1 cut(s) 1544
AspS9I GGNCC 5 cut(s) 624, 754, 2125, 2155, 2325
AsuHPI GGTGA 4 cut(s) 817, 1016, 1056, 2214
AsuII TTCGAA 2 cut(s) 657, 1154
AvaI CYCGRG 3 cut(s) 50, 1086, 2516
AvaII GGWCC 5 cut(s) 624, 754, 2125, 2155, 2325
BaeGI GKGCMC 1 cut(s) 1585
BaeI ACNNNNGTAYC 2 cut(s) 1659, 1692
BalI TGGCCA 1 cut(s) 209
BamHI GGATCC 2 cut(s) 288, 947
BanI GGYRCC 1 cut(s) 828
BanII GRGCYC 1 cut(s) 1020
BarI GAAGNNNNNNTAC 4 cut(s) 2328, 2331, 2360, 2363
BbrPI CACGTG 1 cut(s) 250
BbsI GAAGAC 6 cut(s) 468, 611, 708, 945, 1143, 2211
Bbv12I GWGCWC 2 cut(s) 1020, 2577
BbvI GCAGC 5 cut(s) 74, 271, 397, 425, 574
BccI CCATC 8 cut(s) 447, 534, 541, 583, 1547, 1996, 2143, 2180
BceAI ACGGC 2 cut(s) 163, 1658
BcgI CGANNNNNNTGC 2 cut(s) 647, 681
BciT130I CCWGG 2 cut(s) 283, 2710
BciVI GTATCC 1 cut(s) 1687
BclI TGATCA 3 cut(s) 85, 720, 1326
BcoDI GTCTC 5 cut(s) 195, 643, 812, 1148, 2109
BfaI CTAG 2 cut(s) 614, 1733
BfmI CTRYAG 6 cut(s) 411, 417, 759, 1448, 1518, 2490
BfrI CTTAAG 1 cut(s) 1135
BfuI GTATCC 1 cut(s) 1687
BisI GCNGC 5 cut(s) 63, 260, 411, 414, 563
BlsI GCNGC 5 cut(s) 64, 261, 412, 415, 564
Bme1390I CCNGG 2 cut(s) 283, 2710
Bme18I GGWCC 5 cut(s) 624, 754, 2125, 2155, 2325
BmeRI GACNNNNNGTC 1 cut(s) 2215
BmeT110I CYCGRG 3 cut(s) 50, 1086, 2516
BmgBI CACGTC 1 cut(s) 850
BmgT120I GGNCC 5 cut(s) 624, 754, 2125, 2155, 2325
BmiI GGNNCC 7 cut(s) 290, 756, 830, 949, 1646, 2274, 2326
BmrFI CCNGG 2 cut(s) 283, 2710
BmrI ACTGGG 3 cut(s) 545, 679, 1587
BmsI GCATC 8 cut(s) 130, 997, 1213, 1251, 1476, 2323, 2496, 2655
BmuI ACTGGG 3 cut(s) 545, 679, 1587
BpiI GAAGAC 6 cut(s) 468, 611, 708, 945, 1143, 2211
Bpu14I TTCGAA 2 cut(s) 657, 1154
BpuEI CTTGAG 1 cut(s) 1024
BsaAI YACGTR 1 cut(s) 250
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 1148
BsaJI CCNNGG 4 cut(s) 579, 2089, 2660, 2709
Bsc4I CCNNNNNNNGG 3 cut(s) 585, 868, 2406
Bse1I ACTGG 5 cut(s) 540, 685, 1582, 1675, 2268
Bse3DI GCAATG 2 cut(s) 2363, 2555
BseBI CCWGG 2 cut(s) 283, 2710
BseDI CCNNGG 4 cut(s) 579, 2089, 2660, 2709
BseGI GGATG 9 cut(s) 145, 502, 545, 556, 594, 850, 862, 2656, 2670
BseLI CCNNNNNNNGG 3 cut(s) 585, 868, 2406
BseMI GCAATG 2 cut(s) 2363, 2555
BseMII CTCAG 1 cut(s) 429
BseNI ACTGG 5 cut(s) 540, 685, 1582, 1675, 2268
BseRI GAGGAG 1 cut(s) 2135
BseSI GKGCMC 1 cut(s) 1585
BseXI GCAGC 5 cut(s) 74, 271, 397, 425, 574
BseYI CCCAGC 2 cut(s) 1474, 2076
BsgI GTGCAG 1 cut(s) 479
Bsh1236I CGCG 1 cut(s) 1124
Bsh1285I CGRYCG 3 cut(s) 274, 992, 1128
BshFI GGCC 2 cut(s) 209, 1113
BshNI GGYRCC 1 cut(s) 828
BsiEI CGRYCG 3 cut(s) 274, 992, 1128
BsiHKAI GWGCWC 2 cut(s) 1020, 2577
BsiHKCI CYCGRG 3 cut(s) 50, 1086, 2516
BslFI GGGAC 2 cut(s) 740, 884
BslI CCNNNNNNNGG 3 cut(s) 585, 868, 2406
BsmAI GTCTC 5 cut(s) 195, 643, 812, 1148, 2109
BsmBI CGTCTC 1 cut(s) 2109
BsmFI GGGAC 2 cut(s) 740, 884
BsmI GAATGC 3 cut(s) 665, 775, 1034
BsnI GGCC 2 cut(s) 209, 1113
Bso31I GGTCTC 1 cut(s) 1148
BsoBI CYCGRG 3 cut(s) 50, 1086, 2516
Bsp119I TTCGAA 2 cut(s) 657, 1154
Bsp1286I GDGCHC 3 cut(s) 1020, 1585, 2577
Bsp1407I TGTACA 2 cut(s) 1546, 2696
Bsp68I TCGCGA 1 cut(s) 1124
BspACI CCGC 6 cut(s) 150, 270, 470, 992, 1855, 2225
BspANI GGCC 2 cut(s) 209, 1113
BspCNI CTCAG 1 cut(s) 430
BspFNI CGCG 1 cut(s) 1124
BspHI TCATGA 1 cut(s) 120
BspLI GGNNCC 7 cut(s) 290, 756, 830, 949, 1646, 2274, 2326
BspMAI CTGCAG 2 cut(s) 415, 763
BspPI GGATC 8 cut(s) 283, 296, 604, 942, 955, 1364, 1630, 2661
BspQI GCTCTTC 2 cut(s) 1025, 1232
BspT104I TTCGAA 2 cut(s) 657, 1154
BspT107I GGYRCC 1 cut(s) 828
BspTI CTTAAG 1 cut(s) 1135
BspTNI GGTCTC 1 cut(s) 1148
BsrDI GCAATG 2 cut(s) 2363, 2555
BsrGI TGTACA 2 cut(s) 1546, 2696
BsrI ACTGG 5 cut(s) 540, 685, 1582, 1675, 2268
BssECI CCNNGG 4 cut(s) 579, 2089, 2660, 2709
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 2 cut(s) 2089, 2660
Bst2UI CCWGG 2 cut(s) 283, 2710
Bst4CI ACNGT 3 cut(s) 571, 679, 1567
Bst6I CTCTTC 7 cut(s) 29, 744, 928, 958, 1025, 1232, 2406
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 1135
BstAUI TGTACA 2 cut(s) 1546, 2696
BstBAI YACGTR 1 cut(s) 250
BstBI TTCGAA 2 cut(s) 657, 1154
BstC8I GCNNGC 2 cut(s) 159, 193
BstDEI CTNAG 6 cut(s) 133, 438, 710, 1253, 2246, 2481
BstDSI CCRYGG 1 cut(s) 579
BstENI CCTNNNNNAGG 1 cut(s) 2404
BstF5I GGATG 9 cut(s) 145, 502, 545, 556, 594, 850, 862, 2656, 2670
BstFNI CGCG 1 cut(s) 1124
BstHHI GCGC 1 cut(s) 1544
BstMAI GTCTC 5 cut(s) 195, 643, 812, 1148, 2109
BstMCI CGRYCG 3 cut(s) 274, 992, 1128
BstMWI GCNNNNNNNGC 5 cut(s) 71, 188, 374, 1130, 1475
BstNI CCWGG 2 cut(s) 283, 2710
BstNSI RCATGY 4 cut(s) 1382, 1447, 1482, 2314
BstSCI CCNGG 2 cut(s) 281, 2708
BstSFI CTRYAG 6 cut(s) 411, 417, 759, 1448, 1518, 2490
BstSLI GKGCMC 1 cut(s) 1585
BstUI CGCG 1 cut(s) 1124
BstV1I GCAGC 5 cut(s) 74, 271, 397, 425, 574
BstV2I GAAGAC 6 cut(s) 468, 611, 708, 945, 1143, 2211
BstX2I RGATCY 2 cut(s) 288, 947
BstYI RGATCY 2 cut(s) 288, 947
BsuI GTATCC 1 cut(s) 1687
BsuRI GGCC 2 cut(s) 209, 1113
BtgI CCRYGG 1 cut(s) 579
BtgZI GCGATG 1 cut(s) 2519
BtrI CACGTC 1 cut(s) 850
BtsCI GGATG 9 cut(s) 145, 502, 545, 556, 594, 850, 862, 2656, 2670
BtsI GCAGTG 1 cut(s) 1292
BtsIMutI CAGTG 2 cut(s) 1292, 1668
BtuMI TCGCGA 1 cut(s) 1124
Cac8I GCNNGC 2 cut(s) 159, 193
CaiI CAGNNNCTG 1 cut(s) 112
CciI TCATGA 1 cut(s) 120
CfoI GCGC 1 cut(s) 1544
Cfr13I GGNCC 5 cut(s) 624, 754, 2125, 2155, 2325
CseI GACGC 2 cut(s) 320, 2219
Csp6I GTAC 4 cut(s) 253, 829, 1547, 2697
CviQI GTAC 4 cut(s) 253, 829, 1547, 2697
DdeI CTNAG 6 cut(s) 133, 438, 710, 1253, 2246, 2481
DraI TTTAAA 2 cut(s) 1794, 1803
DriI GACNNNNNGTC 1 cut(s) 2215
EaeI YGGCCR 1 cut(s) 207
Eam1104I CTCTTC 7 cut(s) 29, 744, 928, 958, 1025, 1232, 2406
Eam1105I GACNNNNNGTC 1 cut(s) 2215
EarI CTCTTC 7 cut(s) 29, 744, 928, 958, 1025, 1232, 2406
EciI GGCGGA 1 cut(s) 165
Ecl136II GAGCTC 1 cut(s) 1018
Eco130I CCWWGG 2 cut(s) 2089, 2660
Eco147I AGGCCT 1 cut(s) 1113
Eco24I GRGCYC 1 cut(s) 1020
Eco31I GGTCTC 1 cut(s) 1148
Eco32I GATATC 2 cut(s) 401, 1747
Eco47I GGWCC 5 cut(s) 624, 754, 2125, 2155, 2325
Eco53kI GAGCTC 1 cut(s) 1018
Eco57I CTGAAG 3 cut(s) 1006, 1383, 1847
Eco72I CACGTG 1 cut(s) 250
Eco88I CYCGRG 3 cut(s) 50, 1086, 2516
EcoICRI GAGCTC 1 cut(s) 1018
EcoNI CCTNNNNNAGG 1 cut(s) 2404
EcoO109I RGGNCCY 4 cut(s) 624, 754, 2125, 2155
EcoRI GAATTC 1 cut(s) 728
EcoRII CCWGG 2 cut(s) 281, 2708
EcoRV GATATC 2 cut(s) 401, 1747
EcoT14I CCWWGG 2 cut(s) 2089, 2660
EcoT22I ATGCAT 2 cut(s) 1491, 2316
EcoT38I GRGCYC 1 cut(s) 1020
ErhI CCWWGG 2 cut(s) 2089, 2660
Esp3I CGTCTC 1 cut(s) 2109
FalI AAGNNNNNCTT 6 cut(s) 693, 725, 1229, 1261, 1274, 1306
FaqI GGGAC 2 cut(s) 740, 884
FbaI TGATCA 3 cut(s) 85, 720, 1326
FblI GTMKAC 1 cut(s) 1185
Fnu4HI GCNGC 5 cut(s) 63, 260, 411, 414, 563
FokI GGATG 9 cut(s) 152, 509, 552, 563, 601, 857, 869, 2643, 2677
FriOI GRGCYC 1 cut(s) 1020
Fsp4HI GCNGC 5 cut(s) 63, 260, 411, 414, 563
FspBI CTAG 2 cut(s) 614, 1733
GlaI GCGC 1 cut(s) 1543
GluI GCNGC 5 cut(s) 63, 260, 411, 414, 563
GsaI CCCAGC 2 cut(s) 1478, 2080
HaeIII GGCC 2 cut(s) 209, 1113
HgaI GACGC 2 cut(s) 320, 2219
HhaI GCGC 1 cut(s) 1544
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 1 cut(s) 1542
HinP1I GCGC 1 cut(s) 1542
HincII GTYRAC 1 cut(s) 2209
HindII GTYRAC 1 cut(s) 2209
HindIII AAGCTT 1 cut(s) 2441
HinfI GANTC 7 cut(s) 473, 915, 985, 1838, 2036, 2530, 2630
HphI GGTGA 4 cut(s) 817, 1016, 1056, 2214
Hpy166II GTNNAC 7 cut(s) 253, 808, 862, 979, 1064, 1186, 2209
Hpy188I TCNGA 8 cut(s) 396, 439, 450, 489, 1050, 1866, 2041, 2617
Hpy8I GTNNAC 7 cut(s) 253, 808, 862, 979, 1064, 1186, 2209
Hpy99I CGWCG 1 cut(s) 2678
HpyCH4III ACNGT 3 cut(s) 571, 679, 1567
HpyCH4IV ACGT 3 cut(s) 249, 530, 849
HpyF10VI GCNNNNNNNGC 5 cut(s) 71, 188, 374, 1130, 1475
HpyF3I CTNAG 6 cut(s) 133, 438, 710, 1253, 2246, 2481
HpySE526I ACGT 3 cut(s) 249, 530, 849
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 1 cut(s) 1542
KpnI GGTACC 1 cut(s) 832
Ksp22I TGATCA 3 cut(s) 85, 720, 1326
LguI GCTCTTC 2 cut(s) 1025, 1232
LmnI GCTCC 7 cut(s) 109, 1015, 1176, 1650, 1828, 1857, 2298
Lsp1109I GCAGC 5 cut(s) 74, 271, 397, 425, 574
LweI GCATC 8 cut(s) 130, 997, 1213, 1251, 1476, 2323, 2496, 2655
MaeI CTAG 2 cut(s) 614, 1733
MaeII ACGT 3 cut(s) 249, 530, 849
MaeIII GTNAC 6 cut(s) 348, 531, 1161, 1390, 1439, 1774
MflI RGATCY 2 cut(s) 288, 947
MhlI GDGCHC 3 cut(s) 1020, 1585, 2577
MlsI TGGCCA 1 cut(s) 209
MluNI TGGCCA 1 cut(s) 209
MlyI GAGTC 3 cut(s) 482, 924, 2639
MmeI TCCRAC 1 cut(s) 774
Mox20I TGGCCA 1 cut(s) 209
Mph1103I ATGCAT 2 cut(s) 1491, 2316
MroXI GAANNNNTTC 4 cut(s) 128, 1034, 2199, 2271
MscI TGGCCA 1 cut(s) 209
MslI CAYNNNNRTG 1 cut(s) 2309
Msp20I TGGCCA 1 cut(s) 209
MspA1I CMGCKG 2 cut(s) 416, 994
MspCI CTTAAG 1 cut(s) 1135
MspR9I CCNGG 2 cut(s) 283, 2710
Mva1269I GAATGC 3 cut(s) 665, 775, 1034
MvaI CCWGG 2 cut(s) 283, 2710
MvnI CGCG 1 cut(s) 1124
MwoI GCNNNNNNNGC 5 cut(s) 71, 188, 374, 1130, 1475
NlaIV GGNNCC 7 cut(s) 290, 756, 830, 949, 1646, 2274, 2326
NmuCI GTSAC 2 cut(s) 1161, 1390
NruI TCGCGA 1 cut(s) 1124
NsiI ATGCAT 2 cut(s) 1491, 2316
NspI RCATGY 4 cut(s) 1382, 1447, 1482, 2314
NspV TTCGAA 2 cut(s) 657, 1154
PaeR7I CTCGAG 2 cut(s) 50, 2516
PagI TCATGA 1 cut(s) 120
PceI AGGCCT 1 cut(s) 1113
PciI ACATGT 1 cut(s) 1378
PciSI GCTCTTC 2 cut(s) 1025, 1232
PctI GAATGC 3 cut(s) 665, 775, 1034
PdmI GAANNNNTTC 4 cut(s) 128, 1034, 2199, 2271
PfeI GAWTC 4 cut(s) 985, 1838, 2036, 2530
PkrI GCNGC 5 cut(s) 64, 261, 412, 415, 564
Ple19I CGATCG 1 cut(s) 1128
PleI GAGTC 3 cut(s) 481, 923, 2638
PmaCI CACGTG 1 cut(s) 250
PmlI CACGTG 1 cut(s) 250
PpsI GAGTC 3 cut(s) 481, 923, 2638
Ppu21I YACGTR 1 cut(s) 250
PpuMI RGGWCCY 4 cut(s) 624, 754, 2125, 2155
PscI ACATGT 1 cut(s) 1378
PshBI ATTAAT 1 cut(s) 2394
PsiI TTATAA 1 cut(s) 783
Psp124BI GAGCTC 1 cut(s) 1020
Psp5II RGGWCCY 4 cut(s) 624, 754, 2125, 2155
Psp6I CCWGG 2 cut(s) 281, 2708
PspCI CACGTG 1 cut(s) 250
PspFI CCCAGC 2 cut(s) 1474, 2076
PspGI CCWGG 2 cut(s) 281, 2708
PspN4I GGNNCC 7 cut(s) 290, 756, 830, 949, 1646, 2274, 2326
PspPI GGNCC 5 cut(s) 624, 754, 2125, 2155, 2325
PspPPI RGGWCCY 4 cut(s) 624, 754, 2125, 2155
PstI CTGCAG 2 cut(s) 415, 763
PstNI CAGNNNCTG 1 cut(s) 112
PsuI RGATCY 2 cut(s) 288, 947
PvuI CGATCG 1 cut(s) 1128
PvuII CAGCTG 1 cut(s) 416
RruI TCGCGA 1 cut(s) 1124
RsaI GTAC 4 cut(s) 254, 830, 1548, 2698
RsaNI GTAC 4 cut(s) 253, 829, 1547, 2697
RseI CAYNNNNRTG 1 cut(s) 2309
SacI GAGCTC 1 cut(s) 1020
SapI GCTCTTC 2 cut(s) 1025, 1232
SatI GCNGC 5 cut(s) 63, 260, 411, 414, 563
Sau96I GGNCC 5 cut(s) 624, 754, 2125, 2155, 2325
SchI GAGTC 3 cut(s) 482, 924, 2639
ScrFI CCNGG 2 cut(s) 283, 2710
SduI GDGCHC 3 cut(s) 1020, 1585, 2577
SfaNI GCATC 8 cut(s) 130, 997, 1213, 1251, 1476, 2323, 2496, 2655
SfcI CTRYAG 6 cut(s) 411, 417, 759, 1448, 1518, 2490
Sfr274I CTCGAG 2 cut(s) 50, 2516
SfuI TTCGAA 2 cut(s) 657, 1154
SinI GGWCC 5 cut(s) 624, 754, 2125, 2155, 2325
SlaI CTCGAG 2 cut(s) 50, 2516
SmiI ATTTAAAT 1 cut(s) 1803
SmiMI CAYNNNNRTG 1 cut(s) 2309
SmlI CTYRAG 4 cut(s) 50, 1039, 1135, 2516
SmoI CTYRAG 4 cut(s) 50, 1039, 1135, 2516
SseBI AGGCCT 1 cut(s) 1113
SsiI CCGC 6 cut(s) 150, 270, 470, 992, 1855, 2225
SspI AATATT 1 cut(s) 1799
SspMI CTAG 2 cut(s) 614, 1733
SstI GAGCTC 1 cut(s) 1020
StuI AGGCCT 1 cut(s) 1113
StyD4I CCNGG 2 cut(s) 281, 2708
StyI CCWWGG 2 cut(s) 2089, 2660
SwaI ATTTAAAT 1 cut(s) 1803
TaaI ACNGT 3 cut(s) 571, 679, 1567
TaiI ACGT 3 cut(s) 252, 533, 852
TatI WGTACW 2 cut(s) 1546, 2696
TfiI GAWTC 4 cut(s) 985, 1838, 2036, 2530
TscAI CASTG 2 cut(s) 1292, 1675
TseFI GTSAC 2 cut(s) 1161, 1390
TseI GCWGC 5 cut(s) 62, 259, 410, 413, 562
Tsp45I GTSAC 2 cut(s) 1161, 1390
TspGWI ACGGA 4 cut(s) 568, 1577, 1637, 1785
TspRI CASTG 2 cut(s) 1292, 1675
Vha464I CTTAAG 1 cut(s) 1135
VpaK11BI GGWCC 5 cut(s) 624, 754, 2125, 2155, 2325
VspI ATTAAT 1 cut(s) 2394
XagI CCTNNNNNAGG 1 cut(s) 2404
XapI RAATTY 5 cut(s) 35, 356, 728, 1804, 2195
XbaI TCTAGA 1 cut(s) 1732
XceI RCATGY 4 cut(s) 1382, 1447, 1482, 2314
XcmI CCANNNNNNNNNTGG 1 cut(s) 318
XhoI CTCGAG 2 cut(s) 50, 2516
XmiI GTMKAC 1 cut(s) 1185
XmnI GAANNNNTTC 4 cut(s) 128, 1034, 2199, 2271
XspI CTAG 2 cut(s) 614, 1733
Zsp2I ATGCAT 2 cut(s) 1491, 2316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.