RchiOBHm_Chr5g0018461

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000110
Physical Location & Seq
Forward (+)
13011494 .. 13014247
2754 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29867

Sequence Viewer

Length: 2754 bp
ATGGCCTCATTAGTAACGGACCTCTTAATTGGAAAACTTGCGACAATTCTTGAGAACGAAGGAACAGCCATAGCCGGTATTCGTGATGAAGTTGATAAGATCAAGGAGGAGTTTCTAAGCATGAAAGCTTTCCTAGTGGATGCGGAGGCCAACAAAGCAAAAACAGAAGGAGAGAAATTGTGGGTTGCAAGAATCAGAAACCTAGCCTATGATGTTGAAGACATCATTGATGAATTCATGTATCACATGTATGAGAAGCAAAGTGGGGGTCGACTTTCAAGGGGGCTACACAAAACCATTCGCGCTCCATGTAATCTTTGGTTCAGGCATAAAATTGCAAAGAAGTTGCAGAAAATTACTGAAATGATCAAAGCCATTCCAGAGAGGAATCAAAGATACAGTGTTGGCCTTGTTGGAGGAGCAACTACATCTGAAGATATTCACAAATTGTTGCAGAGCCAAGCGGAGTCTTCGTTTTTCATTAGGGAAGACGAACTCGTTGGGATTAAAGGCAAGAAGCAAATACTAATGGGATGGCTCATGGATGAAGAGCAACACCAAACTGTTATATCTGTGTTTGGCATGGGAGGTTCTGGGAAGACAACTCTAGTTGCCAAGGTCTTCAACAGTGAAAAGGTGAAGAGACATTTCGATTGTTATGCATGGATTACCGTTTCCCAAACGTATGCTGTGGTAGACTTGTTTCGAAGCTTGATCATGGAATTCCACAAATCAAGGAAGGAAGATTTCCCTGCAAATTTGAATGCCATGAACAGCAAAGATTTGCTAGAGTTACTAATTAACTACTTGGACTCCAAAAGATACCTGGTTGTTCTAGATGACGTGTGGGATATAAAAATTTGGAGCGAAATAAATGTATCACTTCAAGATAGGCAACTCGGAAGTCGAATCATAGTTACAACTCGAAAAGAAGATGTAGCATCCCATTCTTTTGGAGTCAAAAGCCATGTTCACCATATTCAACCCCTGCTAAAGAATGAGGCTTGGGAGCTCTTCTGCAAAAAAGCATTTTCATCTAATGAGCACAAAACTTGTCCACCTGATTTTGTGTCGCTAGCTTGCCAACTTGTGGAAAAGTGTGAAGGCCTTCCTCTGGCTATTGTGGCTTTAGGTGGTCTTATGTCTTCCAAGAAGTCGCTGGATAAATGGGAGCAAGTCTGCAACAGCTTGAATTGGCATCTAGATCACAGTCCATTGCTAGACCCTGTGAAAAATATCTTGTTTCTGAGTTTCAATGATTTGCCATCTCAATTGAAACATTGCTTCCTCTATTTCTCTCTATTCCCAGAAGATTTTGTAATTAAAAGAAAAAGACTTGTTAGATTGTGGATGGCAGAAGGATTTGTTGAACATGTGAAAGGGATCACACCAGAAGAAGTTGCAGACAACTATCTTTGGGAACTTTGTTTCCGCAGTATGTTACAAGTTGTGAGGAGAAATAATACAGGCAGGCCGAAACAAGTTAAGATGCATGATCTGATGCGAGAGCTTGCTTTGTCGACAGCCGAGAAAGAAAAGTTTGGTCATGTATACGACGGGAAAGAAGTAATGGAAGACATCTCAATCCGTCGCTTGTCAATTCACAGAATGGAAGGAGAAATTAAATCATGCCCGGGTATGTCAAACATTCGTTCTCTTCTAGTATTTGCCCCTGACATGTCCTCGTTGTGTTTCTCAAATACACTGGTGTCTCGGTTCAAATTATTGAGGACTCTAGAGTTGCAGGAAGTCCAAATTGATAAACTGCCGGGTGAAGTTGTTTACTTGTTCAACTTGAGATATTTAAATTTGAAGGGCACTTTAATCAAGCAACTTCCAGAGTCCATAGGGCGTCTCCGCAACCTTCAGTTACTGAACATCAAGGATACTAAGATAGAATCACTTCCAAAAGAAATTGCAAAGTTGCTGAACCTGCGCCATCTAGTTATGTATCGCTTCACTGGAAACTATCTGGACTTCAAATATGTGAGTGGGATGAAAGTGCCATCGAATATTTCTCAGTTGCAGAAATTGCAAACTTTATCGATGATTGAATCAGAAGGGGACACTATTAGACATCTCGGCAACCTGACTCAACTTAAGAGCATCGGCATATCGAATGTGAAAGAAAGAGATGAGATTGACCTTTGGGTCTCAATTGAAAAGCTGAATCTGCTTCAATCTGTGGTTTTAATGGCAAGTAATGAAGAGGAAATCCTTCCAGTGAAAGCACAATGTCCACATCTTCCGCGCCTTCGAATACTTTATTTGATTGGCAGACTGCAAACCGCAATACCTTGGTTTTCTTCACTGCAGAGCCTAGGACGTCTGTGTCTGCGTTGGTCTAGACTTGAAGAGGATTTACTACCTCAAATTGAAGCACTGCCCTATCTGACATGGCTTGATCTTTGGAATTCATATGTTGGGGAAGAGTTGTGTTTCCGCAGAGGCTTTGTAAAGCTGGAGAGGTTGGAGTTGTGCAATTTTGCCTCGGTGAAAAAGATTAGTATAGAAAAAGGGGTGATGCCAAATCTCCGGTACTTATGGGTTAAAAACTGCATGGAGTTGAAAACAGTGCCATTGGGCCTTGAATACCTTTCTAATCTACATTCTTTGTCTCTGGAATTTGTTCCCACTGAAATTATACACCCCATTCGGAAAGGAGGTGCAGATCGGTCTAAGATACAACACATTCGTGAGGTCATACATGTTTTCGAACATTCATCCAAGCAGGTCTACGAAAACTTGGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

917

Amino Acids

105.66

Weight (kDa)

8.66

Isoelectric Point (pI)

51.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 8 - 90 1.7e-22 Rx N-terminal domain
NB-ARC PF00931 173 - 347 1e-47 NB-ARC domain
WHD_DRP PF23559 434 - 505 2.4e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 550 - 876 8.3e-42 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 2150, 2331
AatII GACGTC 1 cut(s) 2329
Acc36I ACCTGC 2 cut(s) 1941, 2722
AccB7I CCANNNNNTGG 1 cut(s) 1090
AccI GTMKAC 5 cut(s) 271, 696, 1520, 1551, 2736
AccII CGCG 2 cut(s) 303, 2251
AciI CCGC 7 cut(s) 143, 464, 1432, 1858, 2249, 2289, 2443
AclWI GGATC 1 cut(s) 1391
AcsI RAATTY 7 cut(s) 233, 722, 757, 858, 1807, 2413, 2624
AcuI CTGAAG 2 cut(s) 453, 1850
AcyI GRCGYC 2 cut(s) 1852, 2326
AfaI GTAC 1 cut(s) 2540
AfiI CCNNNNNNNGG 2 cut(s) 1090, 1114
AflII CTTAAG 1 cut(s) 2099
AflIII ACRYGT 5 cut(s) 246, 843, 1372, 1677, 2707
AjiI CACGTC 1 cut(s) 844
AjnI CCWGG 1 cut(s) 825
AleI CACNNNNGTG 1 cut(s) 2694
AloI GAACNNNNNNTCC 2 cut(s) 1413, 1445
AluBI AGCT 8 cut(s) 128, 711, 1012, 1079, 1188, 1510, 2167, 2461
AluI AGCT 8 cut(s) 128, 711, 1012, 1079, 1188, 1510, 2167, 2461
Alw21I GWGCWC 2 cut(s) 1014, 1047
Alw26I GTCTC 5 cut(s) 637, 1716, 1859, 2158, 2622
AlwI GGATC 1 cut(s) 1391
AlwNI CAGNNNCTG 1 cut(s) 1873
Ama87I CYCGRG 1 cut(s) 1633
AoxI GGCC 7 cut(s) 3, 147, 406, 1105, 1472, 2584, 2748
ApoI RAATTY 7 cut(s) 233, 722, 757, 858, 1807, 2413, 2624
ArsI GACNNNNNNTTYG 2 cut(s) 253, 285
Asp700I GAANNNNTTC 6 cut(s) 128, 438, 1107, 1902, 2217, 2628
AspA2I CCTAGG 1 cut(s) 2320
AspLEI GCGC 3 cut(s) 305, 1938, 2253
AspS9I GGNCC 2 cut(s) 19, 2584
AsuC2I CCSGG 3 cut(s) 1634, 1635, 1770
AsuHPI GGTGA 5 cut(s) 649, 965, 1784, 2506, 2533
AsuII TTCGAA 3 cut(s) 706, 2257, 2715
AsuNHI GCTAGC 1 cut(s) 1075
AvaI CYCGRG 1 cut(s) 1633
AvaII GGWCC 1 cut(s) 19
AvrII CCTAGG 1 cut(s) 2320
BaeGI GKGCMC 1 cut(s) 1820
BanII GRGCYC 1 cut(s) 1014
BarI GAAGNNNNNNTAC 2 cut(s) 2346, 2378
BbsI GAAGAC 7 cut(s) 225, 462, 495, 605, 613, 1137, 1581
Bbv12I GWGCWC 2 cut(s) 1014, 1047
BccI CCATC 5 cut(s) 528, 1273, 1345, 1947, 2014
BcgI CGANNNNNNTGC 2 cut(s) 641, 675
BciT130I CCWGG 1 cut(s) 827
BciVI GTATCC 1 cut(s) 1879
BclI TGATCA 2 cut(s) 366, 714
BcnI CCSGG 3 cut(s) 1634, 1635, 1770
BcoDI GTCTC 5 cut(s) 637, 1716, 1859, 2158, 2622
BfmI CTRYAG 1 cut(s) 2312
BfrI CTTAAG 1 cut(s) 2099
BfuAI ACCTGC 2 cut(s) 1941, 2722
BfuI GTATCC 1 cut(s) 1879
BlnI CCTAGG 1 cut(s) 2320
Bme1390I CCNGG 4 cut(s) 827, 1634, 1635, 1770
Bme18I GGWCC 1 cut(s) 19
BmeT110I CYCGRG 1 cut(s) 1633
BmgBI CACGTC 1 cut(s) 844
BmgT120I GGNCC 2 cut(s) 19, 2584
BmrFI CCNGG 4 cut(s) 827, 1634, 1635, 1770
BmsI GCATC 7 cut(s) 130, 950, 1207, 1479, 1491, 2115, 2514
BmtI GCTAGC 1 cut(s) 1079
BpiI GAAGAC 7 cut(s) 225, 462, 495, 605, 613, 1137, 1581
BpmI CTGGAG 1 cut(s) 2483
Bpu14I TTCGAA 3 cut(s) 706, 2257, 2715
BpuEI CTTGAG 2 cut(s) 71, 1816
BpuMI CCSGG 3 cut(s) 1634, 1635, 1770
Bsa29I ATCGAT 1 cut(s) 2045
BsaHI GRCGYC 2 cut(s) 1852, 2326
BsaI GGTCTC 1 cut(s) 2158
BsaJI CCNNGG 5 cut(s) 615, 1633, 2297, 2320, 2490
BsaWI WCCGGW 1 cut(s) 2535
BsaXI ACNNNNNCTCC 4 cut(s) 458, 488, 797, 827
Bsc4I CCNNNNNNNGG 2 cut(s) 1090, 1114
Bse118I RCCGGY 1 cut(s) 74
Bse1I ACTGG 3 cut(s) 1710, 1966, 2222
Bse3DI GCAATG 2 cut(s) 1214, 1279
BseBI CCWGG 1 cut(s) 827
BseCI ATCGAT 1 cut(s) 2045
BseDI CCNNGG 5 cut(s) 615, 1633, 2297, 2320, 2490
BseGI GGATG 7 cut(s) 145, 539, 550, 941, 1356, 2001, 2723
BseLI CCNNNNNNNGG 2 cut(s) 1090, 1114
BseMI GCAATG 2 cut(s) 1214, 1279
BseMII CTCAG 2 cut(s) 1238, 2033
BseNI ACTGG 3 cut(s) 1710, 1966, 2222
BseRI GAGGAG 3 cut(s) 122, 432, 1468
BseSI GKGCMC 1 cut(s) 1820
BsgI GTGCAG 1 cut(s) 2688
Bsh1236I CGCG 2 cut(s) 303, 2251
BshFI GGCC 7 cut(s) 5, 149, 408, 1107, 1474, 2586, 2750
BshVI ATCGAT 1 cut(s) 2045
BsiHKAI GWGCWC 2 cut(s) 1014, 1047
BsiHKCI CYCGRG 1 cut(s) 1633
BsiSI CCGG 4 cut(s) 75, 1634, 1769, 2536
BslFI GGGAC 1 cut(s) 2078
BslI CCNNNNNNNGG 2 cut(s) 1090, 1114
BsmAI GTCTC 5 cut(s) 637, 1716, 1859, 2158, 2622
BsmBI CGTCTC 1 cut(s) 1859
BsmFI GGGAC 1 cut(s) 2078
BsmI GAATGC 1 cut(s) 769
BsnI GGCC 7 cut(s) 5, 149, 408, 1107, 1474, 2586, 2750
Bso31I GGTCTC 1 cut(s) 2158
BsoBI CYCGRG 1 cut(s) 1633
Bsp119I TTCGAA 3 cut(s) 706, 2257, 2715
Bsp1286I GDGCHC 3 cut(s) 1014, 1047, 1820
Bsp143I GATC 8 cut(s) 99, 366, 714, 1204, 1383, 1495, 2404, 2671
BspACI CCGC 7 cut(s) 143, 464, 1432, 1858, 2249, 2289, 2443
BspANI GGCC 7 cut(s) 5, 149, 408, 1107, 1474, 2586, 2750
BspCNI CTCAG 2 cut(s) 1239, 2032
BspDI ATCGAT 1 cut(s) 2045
BspFNI CGCG 2 cut(s) 303, 2251
BspMAI CTGCAG 1 cut(s) 2316
BspMI ACCTGC 2 cut(s) 1941, 2722
BspOI GCTAGC 1 cut(s) 1079
BspPI GGATC 1 cut(s) 1391
BspQI GCTCTTC 2 cut(s) 543, 1019
BspT104I TTCGAA 3 cut(s) 706, 2257, 2715
BspTI CTTAAG 1 cut(s) 2099
BspTNI GGTCTC 1 cut(s) 2158
BsrDI GCAATG 2 cut(s) 1214, 1279
BsrFI RCCGGY 1 cut(s) 74
BsrI ACTGG 3 cut(s) 1710, 1966, 2222
BssAI RCCGGY 1 cut(s) 74
BssECI CCNNGG 5 cut(s) 615, 1633, 2297, 2320, 2490
BssMI GATC 8 cut(s) 99, 366, 714, 1204, 1383, 1495, 2404, 2671
BssNAI GTATAC 1 cut(s) 1552
BssNI GRCGYC 2 cut(s) 1852, 2326
BssT1I CCWWGG 3 cut(s) 615, 2297, 2320
Bst1107I GTATAC 1 cut(s) 1552
Bst2UI CCWGG 1 cut(s) 827
Bst4CI ACNGT 6 cut(s) 401, 565, 629, 673, 1211, 2575
Bst6I CTCTTC 7 cut(s) 543, 635, 1019, 1662, 2202, 2349, 2424
BstACI GRCGYC 2 cut(s) 1852, 2326
BstAFI CTTAAG 1 cut(s) 2099
BstAPI GCANNNNNTGC 1 cut(s) 2032
BstBI TTCGAA 3 cut(s) 706, 2257, 2715
BstC8I GCNNGC 4 cut(s) 1077, 1081, 1472, 1512
BstDEI CTNAG 5 cut(s) 116, 1247, 1890, 2019, 2679
BstF5I GGATG 7 cut(s) 145, 539, 550, 941, 1356, 2001, 2723
BstFNI CGCG 2 cut(s) 303, 2251
BstHHI GCGC 3 cut(s) 305, 1938, 2253
BstKTI GATC 8 cut(s) 102, 369, 717, 1207, 1386, 1498, 2407, 2674
BstMAI GTCTC 5 cut(s) 637, 1716, 1859, 2158, 2622
BstMBI GATC 8 cut(s) 99, 366, 714, 1204, 1383, 1495, 2404, 2671
BstMWI GCNNNNNNNGC 5 cut(s) 155, 1124, 1933, 2032, 2173
BstNI CCWGG 1 cut(s) 827
BstNSI RCATGY 4 cut(s) 250, 1376, 1681, 2711
BstSCI CCNGG 4 cut(s) 825, 1632, 1633, 1768
BstSFI CTRYAG 1 cut(s) 2312
BstSLI GKGCMC 1 cut(s) 1820
BstUI CGCG 2 cut(s) 303, 2251
BstV2I GAAGAC 7 cut(s) 225, 462, 495, 605, 613, 1137, 1581
BstXI CCANNNNNNTGG 1 cut(s) 953
BstZ17I GTATAC 1 cut(s) 1552
Bsu15I ATCGAT 1 cut(s) 2045
BsuI GTATCC 1 cut(s) 1879
BsuRI GGCC 7 cut(s) 5, 149, 408, 1107, 1474, 2586, 2750
BsuTUI ATCGAT 1 cut(s) 2045
BtrI CACGTC 1 cut(s) 844
BtsCI GGATG 7 cut(s) 145, 539, 550, 941, 1356, 2001, 2723
BtsI GCAGTG 2 cut(s) 2309, 2381
BtsIMutI CAGTG 9 cut(s) 406, 634, 1703, 1959, 2229, 2309, 2381, 2580, 2634
BveI ACCTGC 2 cut(s) 1941, 2722
Cac8I GCNNGC 4 cut(s) 1077, 1081, 1472, 1512
CaiI CAGNNNCTG 1 cut(s) 1873
CfoI GCGC 3 cut(s) 305, 1938, 2253
Cfr10I RCCGGY 1 cut(s) 74
Cfr13I GGNCC 2 cut(s) 19, 2584
Cfr9I CCCGGG 1 cut(s) 1633
ClaI ATCGAT 1 cut(s) 2045
CseI GACGC 1 cut(s) 1841
CsiI ACCWGGT 1 cut(s) 825
Csp6I GTAC 1 cut(s) 2539
CviQI GTAC 1 cut(s) 2539
DdeI CTNAG 5 cut(s) 116, 1247, 1890, 2019, 2679
DpnI GATC 8 cut(s) 101, 368, 716, 1206, 1385, 1497, 2406, 2673
DpnII GATC 8 cut(s) 99, 366, 714, 1204, 1383, 1495, 2404, 2671
DraI TTTAAA 1 cut(s) 1806
DrdI GACNNNNNNGTC 2 cut(s) 2150, 2331
DseDI GACNNNNNNGTC 2 cut(s) 2150, 2331
Eam1104I CTCTTC 7 cut(s) 543, 635, 1019, 1662, 2202, 2349, 2424
EarI CTCTTC 7 cut(s) 543, 635, 1019, 1662, 2202, 2349, 2424
Ecl136II GAGCTC 1 cut(s) 1012
Eco130I CCWWGG 3 cut(s) 615, 2297, 2320
Eco147I AGGCCT 1 cut(s) 1107
Eco24I GRGCYC 1 cut(s) 1014
Eco31I GGTCTC 1 cut(s) 2158
Eco47I GGWCC 1 cut(s) 19
Eco53kI GAGCTC 1 cut(s) 1012
Eco57I CTGAAG 2 cut(s) 453, 1850
Eco88I CYCGRG 1 cut(s) 1633
EcoICRI GAGCTC 1 cut(s) 1012
EcoRI GAATTC 3 cut(s) 233, 722, 2413
EcoRII CCWGG 1 cut(s) 825
EcoT14I CCWWGG 3 cut(s) 615, 2297, 2320
EcoT22I ATGCAT 2 cut(s) 664, 1494
EcoT38I GRGCYC 1 cut(s) 1014
ErhI CCWWGG 3 cut(s) 615, 2297, 2320
Esp3I CGTCTC 1 cut(s) 1859
FaqI GGGAC 1 cut(s) 2078
FauNDI CATATG 1 cut(s) 2419
FbaI TGATCA 2 cut(s) 366, 714
FblI GTMKAC 5 cut(s) 271, 696, 1520, 1551, 2736
FokI GGATG 7 cut(s) 152, 546, 557, 928, 1363, 2008, 2710
FriOI GRGCYC 1 cut(s) 1014
GlaI GCGC 3 cut(s) 304, 1937, 2252
GsuI CTGGAG 1 cut(s) 2483
HaeIII GGCC 7 cut(s) 5, 149, 408, 1107, 1474, 2586, 2750
HapII CCGG 4 cut(s) 75, 1634, 1769, 2536
HgaI GACGC 1 cut(s) 1841
HhaI GCGC 3 cut(s) 305, 1938, 2253
Hin1I GRCGYC 2 cut(s) 1852, 2326
Hin6I GCGC 3 cut(s) 303, 1936, 2251
HinP1I GCGC 3 cut(s) 303, 1936, 2251
HincII GTYRAC 2 cut(s) 272, 1521
HindII GTYRAC 2 cut(s) 272, 1521
HindIII AAGCTT 2 cut(s) 126, 709
HpaII CCGG 4 cut(s) 75, 1634, 1769, 2536
HphI GGTGA 5 cut(s) 649, 965, 1784, 2506, 2533
Hpy166II GTNNAC 9 cut(s) 272, 697, 973, 1058, 1521, 1552, 1783, 2240, 2737
Hpy188I TCNGA 8 cut(s) 197, 433, 902, 1248, 1500, 2059, 2394, 2658
Hpy8I GTNNAC 9 cut(s) 272, 697, 973, 1058, 1521, 1552, 1783, 2240, 2737
Hpy99I CGWCG 2 cut(s) 1559, 1593
HpyCH4III ACNGT 6 cut(s) 401, 565, 629, 673, 1211, 2575
HpyCH4IV ACGT 3 cut(s) 683, 843, 2326
HpyF10VI GCNNNNNNNGC 5 cut(s) 155, 1124, 1933, 2032, 2173
HpyF3I CTNAG 5 cut(s) 116, 1247, 1890, 2019, 2679
HpySE526I ACGT 3 cut(s) 683, 843, 2326
Hsp92I GRCGYC 2 cut(s) 1852, 2326
HspAI GCGC 3 cut(s) 303, 1936, 2251
Ksp22I TGATCA 2 cut(s) 366, 714
Kzo9I GATC 8 cut(s) 99, 366, 714, 1204, 1383, 1495, 2404, 2671
LguI GCTCTTC 2 cut(s) 543, 1019
LmnI GCTCC 5 cut(s) 310, 419, 864, 1009, 1171
LweI GCATC 7 cut(s) 130, 950, 1207, 1479, 1491, 2115, 2514
MabI ACCWGGT 1 cut(s) 825
MaeII ACGT 3 cut(s) 683, 843, 2326
MaeIII GTNAC 5 cut(s) 13, 792, 916, 1440, 1869
MalI GATC 8 cut(s) 101, 368, 716, 1206, 1385, 1497, 2406, 2673
MboI GATC 8 cut(s) 99, 366, 714, 1204, 1383, 1495, 2404, 2671
MfeI CAATTG 2 cut(s) 1271, 2157
MhlI GDGCHC 3 cut(s) 1014, 1047, 1820
MlyI GAGTC 6 cut(s) 476, 806, 966, 1726, 1850, 2086
MmeI TCCRAC 2 cut(s) 394, 2451
Mph1103I ATGCAT 2 cut(s) 664, 1494
MroXI GAANNNNTTC 6 cut(s) 128, 438, 1107, 1902, 2217, 2628
MslI CAYNNNNRTG 2 cut(s) 249, 2694
MspCI CTTAAG 1 cut(s) 2099
MspI CCGG 4 cut(s) 75, 1634, 1769, 2536
MspR9I CCNGG 4 cut(s) 827, 1634, 1635, 1770
MunI CAATTG 2 cut(s) 1271, 2157
Mva1269I GAATGC 1 cut(s) 769
MvaI CCWGG 1 cut(s) 827
MvnI CGCG 2 cut(s) 303, 2251
MwoI GCNNNNNNNGC 5 cut(s) 155, 1124, 1933, 2032, 2173
NciI CCSGG 3 cut(s) 1634, 1635, 1770
NdeI CATATG 1 cut(s) 2419
NdeII GATC 8 cut(s) 99, 366, 714, 1204, 1383, 1495, 2404, 2671
NheI GCTAGC 1 cut(s) 1075
NmeAIII GCCGAG 2 cut(s) 1552, 2061
NsiI ATGCAT 2 cut(s) 664, 1494
NspI RCATGY 4 cut(s) 250, 1376, 1681, 2711
NspV TTCGAA 3 cut(s) 706, 2257, 2715
OliI CACNNNNGTG 1 cut(s) 2694
PceI AGGCCT 1 cut(s) 1107
PciI ACATGT 4 cut(s) 246, 1372, 1677, 2707
PciSI GCTCTTC 2 cut(s) 543, 1019
PctI GAATGC 1 cut(s) 769
PdmI GAANNNNTTC 6 cut(s) 128, 438, 1107, 1902, 2217, 2628
PfeI GAWTC 6 cut(s) 192, 388, 909, 1898, 2054, 2170
PflMI CCANNNNNTGG 1 cut(s) 1090
PleI GAGTC 6 cut(s) 475, 806, 965, 1726, 1849, 2086
PpsI GAGTC 6 cut(s) 475, 806, 965, 1726, 1849, 2086
PscI ACATGT 4 cut(s) 246, 1372, 1677, 2707
Psp124BI GAGCTC 1 cut(s) 1014
Psp6I CCWGG 1 cut(s) 825
PspGI CCWGG 1 cut(s) 825
PspPI GGNCC 2 cut(s) 19, 2584
PstI CTGCAG 1 cut(s) 2316
PstNI CAGNNNCTG 1 cut(s) 1873
RsaI GTAC 1 cut(s) 2540
RsaNI GTAC 1 cut(s) 2539
RseI CAYNNNNRTG 2 cut(s) 249, 2694
SacI GAGCTC 1 cut(s) 1014
SalI GTCGAC 2 cut(s) 270, 1519
SapI GCTCTTC 2 cut(s) 543, 1019
Sau3AI GATC 8 cut(s) 99, 366, 714, 1204, 1383, 1495, 2404, 2671
Sau96I GGNCC 2 cut(s) 19, 2584
SchI GAGTC 6 cut(s) 476, 806, 966, 1726, 1850, 2086
ScrFI CCNGG 4 cut(s) 827, 1634, 1635, 1770
SduI GDGCHC 3 cut(s) 1014, 1047, 1820
SexAI ACCWGGT 1 cut(s) 825
SfaNI GCATC 7 cut(s) 130, 950, 1207, 1479, 1491, 2115, 2514
SfcI CTRYAG 1 cut(s) 2312
SfuI TTCGAA 3 cut(s) 706, 2257, 2715
SinI GGWCC 1 cut(s) 19
SmaI CCCGGG 1 cut(s) 1635
SmiI ATTTAAAT 1 cut(s) 1806
SmiMI CAYNNNNRTG 2 cut(s) 249, 2694
SmlI CTYRAG 3 cut(s) 50, 1795, 2099
SmoI CTYRAG 3 cut(s) 50, 1795, 2099
SseBI AGGCCT 1 cut(s) 1107
SsiI CCGC 7 cut(s) 143, 464, 1432, 1858, 2249, 2289, 2443
SspI AATATT 1 cut(s) 2014
SstI GAGCTC 1 cut(s) 1014
StuI AGGCCT 1 cut(s) 1107
StyD4I CCNGG 4 cut(s) 825, 1632, 1633, 1768
StyI CCWWGG 3 cut(s) 615, 2297, 2320
SwaI ATTTAAAT 1 cut(s) 1806
TaaI ACNGT 6 cut(s) 401, 565, 629, 673, 1211, 2575
TaiI ACGT 3 cut(s) 686, 846, 2329
TaqII GACCGA 1 cut(s) 2664
TfiI GAWTC 6 cut(s) 192, 388, 909, 1898, 2054, 2170
TscAI CASTG 9 cut(s) 406, 634, 1710, 1966, 2229, 2316, 2388, 2580, 2641
TspGWI ACGGA 2 cut(s) 32, 1577
TspMI CCCGGG 1 cut(s) 1633
TspRI CASTG 9 cut(s) 406, 634, 1710, 1966, 2229, 2316, 2388, 2580, 2641
Van91I CCANNNNNTGG 1 cut(s) 1090
Vha464I CTTAAG 1 cut(s) 2099
VpaK11BI GGWCC 1 cut(s) 19
XapI RAATTY 7 cut(s) 233, 722, 757, 858, 1807, 2413, 2624
XbaI TCTAGA 4 cut(s) 835, 1201, 1735, 2345
XceI RCATGY 4 cut(s) 250, 1376, 1681, 2711
XcmI CCANNNNNNNNNTGG 3 cut(s) 315, 823, 1156
XmaI CCCGGG 1 cut(s) 1633
XmaJI CCTAGG 1 cut(s) 2320
XmiI GTMKAC 5 cut(s) 271, 696, 1520, 1551, 2736
XmnI GAANNNNTTC 6 cut(s) 128, 438, 1107, 1902, 2217, 2628
ZraI GACGTC 1 cut(s) 2327
Zsp2I ATGCAT 2 cut(s) 664, 1494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.