Rmu_sc0006594.1_g000002

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006594.1
OG0000110
Physical Location & Seq
Reverse (-)
7065 .. 9812
2748 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006594.1_g000002.1.cds

Sequence Viewer

Length: 2748 bp
atggccttatctgcgacaatcctattgatcggaaaacttggggcaattcttgagaacgaaggaacaaccatagctggtgttcgtgatgaagttgacaagattaagctggagcttctaagcatgaaagctttcctggaggatgcagaggccaacaaagcaaaaactgaaggagagaaattgctggttgcaagcatcagagacttggcctatggtgttgaagatatcattgatgaattcatgtattacatgtatgagaagcaaagtgggagtccactttcaaggggcctacagaaaaccattcgcggtccaagtaatctttggttcaggcataaaattgcaaagaagttgcagaaaattactgaaatgatcaaagccattccagacaggaatcaaagatacggtgttggccttgtaggagaagcaactacatctgaagatattcacaaatgggtgcagaaccaagcagactcttcttttttcattatggaagacgaactggttgggattgaaggccagaagcaaatactaatggggtggctgatggatgaagtgcaacaccaaactgttgtctctgtggttgggatgggaggttctggaaagacaactctggttgccaagaccttcaccaatgaaagggtaaagagacatttcgattgttgtgcgtggattacggtctcccaaacttatgctgtagtagacttgtttcggagcttgatcatggaactctacaaatcaagaaaggaagcttgccctacaaatttgagtgccatgagcagcagagaattgatagagatactgatggactacttagggtctaaaaaataccttgttgttctagatgatgtgtgggagataagagtttggagagaaataaaggtatcacttcaagatagacaacttggaagtcgaatagttctgacaactcgaaatgaagaagtagcatccaactcttttggagttgaatgccatgtgcacaaaattcagcccctgcaaaagaatgaggcttgtgagctcttccgcaagaaagcattctcaactaatcagcaatgtccaactgagctcgagtcattagcttgccaacttgtggaaaagtgtgatggccttcctttagcacttgtggctttaggtggtcttatgttttcgaagaagtccctggatcaatgggagaaagtccgcaaaagcttaaattggcatctacataacaattcaatgctgcaccctgtgaaaaacatcttgttgctgagtttcaatgagttgccatttcaattgaaacattgcttcctctattgttctcttttcccagaagatttttcaattaagagaaaaaggcttattagattatggatagctgaaggatttgttgaaaatgtgaaaggggtcacgcccgaagaagttgcagatggctatttttgggaactctgcttccgtagcatgttacaagttgtagagagaaatggaacaggaaggccgagaatagttaagatgcatgatcttatgcgagagctcgctttgtcgacatccgaaaaagaaaagtttggttatgtatacgacgggagagaagtaatggaagagatctcaacccgtcgcttgtcaattcacagaatggaaggagaaattaaatcatggccgggtatgtcaaagattcgttctcttcttgtctttgcaactgacatgtcctcattgtctttcttaaatgcactggtttctcgattcaaattgttgaggactctagacttggaggatgtccaaattgataaactgccgggtgcagttgtttccatgttcaacttgagatacttaaatttaaaaggcactttaatcgagaaacttccagaatccatagggcgtctccgcaaccttcaatttctgaacattagggatactaagatcgagacacttccacaaggaactgcaaagttgctaaacctgcgccatctaattatgtatcgctatgctagaagcagtctaaatttcaaatatgtgcgtgggacaaaagcgccatcaaatatttgtaagttgcagaaattgcaatgtttaagaattattgaatcagaaggggacactagtagacttatcggcaacatgactcaactcagaagcatcggcatatcgaatgtgaaagaaagagatgagattgacctttgggtctcaattaagaagttgactatgcttcagtctttgtttttaacggcaagtaatgaagaggaaattcttccggtgaaaacacaatgtccacctcttccgcaccttcgaaagctttatttgactggcagactgcaaaacgtaagaccttggttttcttcactgcacagcctcagatcattggttttgcgttggtgtagacttgaagaggatttactacctcaaattgaagcactgcccaatctgacaacgcttcatctttggaatgcatatgttggggaagagttgtgtttccgcagaggctttgtaaagctagagaggttgaatttgttgaattttgcctcggtgaaaaagattactattgaaaagggggtgatgccaaatctccagaacttatggattcagagctgcatggacttgaagacagtgccaccgggccttgaatacctttctaatctacaaactttgggcttgtcaattgttccccttgaagttataaagtccattcggaaaggaggtgcgaatcgctctaaggtacaacacatccctaaaatcatacatgttttcaaacagtcatccaagcgggtcttcgaaaacttggcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

915

Amino Acids

104.85

Weight (kDa)

9.18

Isoelectric Point (pI)

51.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2639
AasI GACNNNNNNGTC 1 cut(s) 2144
Acc36I ACCTGC 1 cut(s) 1935
AccB7I CCANNNNNTGG 1 cut(s) 1084
AccI GTMKAC 5 cut(s) 696, 1514, 1545, 2068, 2341
AccII CGCG 1 cut(s) 303
AciI CCGC 7 cut(s) 303, 1018, 1174, 1852, 2243, 2437, 2725
AclWI GGATC 1 cut(s) 1164
AcoI YGGCCR 1 cut(s) 1625
AcsI RAATTY 8 cut(s) 233, 757, 978, 1801, 1969, 2208, 2467, 2476
AcuI CTGAAG 4 cut(s) 186, 453, 1371, 2156
AcyI GRCGYC 1 cut(s) 1846
AdeI CACNNNGTG 1 cut(s) 1222
AfaI GTAC 1 cut(s) 2679
AfiI CCNNNNNNNGG 2 cut(s) 633, 1084
AflIII ACRYGT 3 cut(s) 246, 1671, 2701
AhlI ACTAGT 1 cut(s) 2063
AjnI CCWGG 2 cut(s) 132, 1152
AjuI GAANNNNNNNTTGG 2 cut(s) 2714, 2746
AloI GAACNNNNNNTCC 4 cut(s) 574, 606, 1407, 1439
Alw21I GWGCWC 4 cut(s) 975, 1014, 1062, 1506
Alw26I GTCTC 7 cut(s) 192, 574, 637, 679, 1853, 1886, 2152
Alw44I GTGCAC 1 cut(s) 971
AlwI GGATC 1 cut(s) 1164
AlwNI CAGNNNCTG 1 cut(s) 988
Ama87I CYCGRG 1 cut(s) 1061
ApaLI GTGCAC 1 cut(s) 971
ApeKI GCWGC 3 cut(s) 774, 1213, 2550
ApoI RAATTY 8 cut(s) 233, 757, 978, 1801, 1969, 2208, 2467, 2476
ArsI GACNNNNNNTTYG 2 cut(s) 253, 285
Asp700I GAANNNNTTC 4 cut(s) 128, 438, 1028, 2211
AspLEI GCGC 2 cut(s) 1932, 1999
AspS9I GGNCC 3 cut(s) 283, 305, 2578
AsuC2I CCSGG 3 cut(s) 1629, 1764, 2577
AsuHPI GGTGA 4 cut(s) 616, 2230, 2500, 2527
AsuII TTCGAA 3 cut(s) 1142, 2251, 2733
AvaI CYCGRG 1 cut(s) 1061
AvaII GGWCC 1 cut(s) 305
BaeGI GKGCMC 1 cut(s) 975
BanII GRGCYC 3 cut(s) 1014, 1062, 1506
BarI GAAGNNNNNNTAC 2 cut(s) 2340, 2372
BbsI GAAGAC 3 cut(s) 495, 2570, 2722
Bbv12I GWGCWC 4 cut(s) 975, 1014, 1062, 1506
BbvI GCAGC 3 cut(s) 786, 1200, 2537
BccI CCATC 7 cut(s) 535, 577, 793, 1091, 1394, 1941, 2008
BceAI ACGGC 1 cut(s) 2205
BcgI CGANNNNNNTGC 6 cut(s) 641, 675, 1376, 1410, 1801, 1835
BciT130I CCWGG 2 cut(s) 134, 1154
BciVI GTATCC 1 cut(s) 1873
BclI TGATCA 2 cut(s) 366, 714
BcnI CCSGG 3 cut(s) 1629, 1764, 2577
BcoDI GTCTC 7 cut(s) 192, 574, 637, 679, 1853, 1886, 2152
BcuI ACTAGT 1 cut(s) 2063
BfaI CTAG 6 cut(s) 836, 1730, 1956, 2064, 2456, 2746
BfmI CTRYAG 2 cut(s) 287, 690
BfoI RGCGCY 1 cut(s) 2000
BfuAI ACCTGC 1 cut(s) 1935
BfuI GTATCC 1 cut(s) 1873
BglII AGATCT 1 cut(s) 1572
BisI GCNGC 3 cut(s) 775, 1214, 2551
BlsI GCNGC 3 cut(s) 776, 1215, 2552
Bme1390I CCNGG 5 cut(s) 134, 1154, 1629, 1764, 2577
Bme18I GGWCC 1 cut(s) 305
BmeT110I CYCGRG 1 cut(s) 1061
BmgT120I GGNCC 3 cut(s) 283, 305, 2578
BmiI GGNNCC 1 cut(s) 284
BmrFI CCNGG 5 cut(s) 134, 1154, 1629, 1764, 2577
BmsI GCATC 7 cut(s) 130, 201, 950, 1201, 1473, 2109, 2508
BpiI GAAGAC 3 cut(s) 495, 2570, 2722
BpmI CTGGAG 3 cut(s) 128, 155, 2513
Bpu14I TTCGAA 3 cut(s) 1142, 2251, 2733
BpuEI CTTGAG 2 cut(s) 71, 1810
BpuMI CCSGG 3 cut(s) 1629, 1764, 2577
BsaHI GRCGYC 1 cut(s) 1846
BsaI GGTCTC 2 cut(s) 679, 2152
BsaJI CCNNGG 3 cut(s) 1152, 2291, 2484
BsaWI WCCGGW 1 cut(s) 2215
Bsc4I CCNNNNNNNGG 2 cut(s) 633, 1084
Bse1I ACTGG 3 cut(s) 501, 1704, 2272
Bse3DI GCAATG 3 cut(s) 1052, 1273, 2036
BseBI CCWGG 2 cut(s) 134, 1154
BseDI CCNNGG 3 cut(s) 1152, 2291, 2484
BseGI GGATG 8 cut(s) 145, 550, 588, 941, 1517, 1747, 2685, 2717
BseLI CCNNNNNNNGG 2 cut(s) 633, 1084
BseMI GCAATG 3 cut(s) 1052, 1273, 2036
BseMII CTCAG 4 cut(s) 1047, 1232, 2107, 2329
BseNI ACTGG 3 cut(s) 501, 1704, 2272
BseSI GKGCMC 1 cut(s) 975
BseXI GCAGC 3 cut(s) 786, 1200, 2537
BsgI GTGCAG 4 cut(s) 473, 1199, 1788, 2291
Bsh1236I CGCG 1 cut(s) 303
BsiHKAI GWGCWC 4 cut(s) 975, 1014, 1062, 1506
BsiHKCI CYCGRG 1 cut(s) 1061
BsiSI CCGG 4 cut(s) 1628, 1763, 2216, 2576
BslFI GGGAC 3 cut(s) 1135, 2002, 2072
BslI CCNNNNNNNGG 2 cut(s) 633, 1084
BsmAI GTCTC 7 cut(s) 192, 574, 637, 679, 1853, 1886, 2152
BsmBI CGTCTC 1 cut(s) 1853
BsmFI GGGAC 3 cut(s) 1135, 2002, 2072
BsmI GAATGC 3 cut(s) 968, 1028, 2413
Bso31I GGTCTC 2 cut(s) 679, 2152
BsoBI CYCGRG 1 cut(s) 1061
Bsp119I TTCGAA 3 cut(s) 1142, 2251, 2733
Bsp1286I GDGCHC 4 cut(s) 975, 1014, 1062, 1506
Bsp143I GATC 8 cut(s) 27, 366, 714, 1156, 1489, 1572, 1887, 2318
BspACI CCGC 7 cut(s) 303, 1018, 1174, 1852, 2243, 2437, 2725
BspCNI CTCAG 4 cut(s) 1048, 1233, 2106, 2328
BspFNI CGCG 1 cut(s) 303
BspLI GGNNCC 1 cut(s) 284
BspMI ACCTGC 1 cut(s) 1935
BspPI GGATC 1 cut(s) 1164
BspQI GCTCTTC 1 cut(s) 1019
BspT104I TTCGAA 3 cut(s) 1142, 2251, 2733
BspTNI GGTCTC 2 cut(s) 679, 2152
BsrDI GCAATG 3 cut(s) 1052, 1273, 2036
BsrI ACTGG 3 cut(s) 501, 1704, 2272
BssECI CCNNGG 3 cut(s) 1152, 2291, 2484
BssMI GATC 8 cut(s) 27, 366, 714, 1156, 1489, 1572, 1887, 2318
BssNAI GTATAC 1 cut(s) 1546
BssNI GRCGYC 1 cut(s) 1846
BssT1I CCWWGG 1 cut(s) 2291
Bst1107I GTATAC 1 cut(s) 1546
Bst2UI CCWGG 2 cut(s) 134, 1154
Bst4CI ACNGT 5 cut(s) 401, 565, 673, 2569, 2715
Bst6I CTCTTC 8 cut(s) 475, 1019, 1563, 1656, 2196, 2244, 2343, 2418
BstACI GRCGYC 1 cut(s) 1846
BstAPI GCANNNNNTGC 1 cut(s) 2026
BstBI TTCGAA 3 cut(s) 1142, 2251, 2733
BstC8I GCNNGC 4 cut(s) 190, 748, 1075, 1506
BstDEI CTNAG 8 cut(s) 116, 808, 1056, 1241, 1884, 2093, 2315, 2673
BstF5I GGATG 8 cut(s) 145, 550, 588, 941, 1517, 1747, 2685, 2717
BstFNI CGCG 1 cut(s) 303
BstH2I RGCGCY 1 cut(s) 2000
BstHHI GCGC 2 cut(s) 1932, 1999
BstKTI GATC 8 cut(s) 30, 369, 717, 1159, 1492, 1575, 1890, 2321
BstMAI GTCTC 7 cut(s) 192, 574, 637, 679, 1853, 1886, 2152
BstMBI GATC 8 cut(s) 27, 366, 714, 1156, 1489, 1572, 1887, 2318
BstMWI GCNNNNNNNGC 6 cut(s) 11, 155, 1118, 1428, 1927, 2026
BstNI CCWGG 2 cut(s) 134, 1154
BstNSI RCATGY 4 cut(s) 250, 1435, 1675, 2705
BstSCI CCNGG 5 cut(s) 132, 1152, 1627, 1762, 2575
BstSFI CTRYAG 2 cut(s) 287, 690
BstSLI GKGCMC 1 cut(s) 975
BstUI CGCG 1 cut(s) 303
BstV1I GCAGC 3 cut(s) 786, 1200, 2537
BstV2I GAAGAC 3 cut(s) 495, 2570, 2722
BstX2I RGATCY 1 cut(s) 1572
BstYI RGATCY 1 cut(s) 1572
BstZ17I GTATAC 1 cut(s) 1546
BsuI GTATCC 1 cut(s) 1873
BtsCI GGATG 8 cut(s) 145, 550, 588, 941, 1517, 1747, 2685, 2717
BtsI GCAGTG 2 cut(s) 2303, 2375
BtsIMutI CAGTG 4 cut(s) 1697, 2303, 2375, 2574
BveI ACCTGC 1 cut(s) 1935
Cac8I GCNNGC 4 cut(s) 190, 748, 1075, 1506
CaiI CAGNNNCTG 1 cut(s) 988
CfoI GCGC 2 cut(s) 1932, 1999
Cfr13I GGNCC 3 cut(s) 283, 305, 2578
CseI GACGC 1 cut(s) 1835
Csp6I GTAC 1 cut(s) 2678
CviQI GTAC 1 cut(s) 2678
DdeI CTNAG 8 cut(s) 116, 808, 1056, 1241, 1884, 2093, 2315, 2673
DpnI GATC 8 cut(s) 29, 368, 716, 1158, 1491, 1574, 1889, 2320
DpnII GATC 8 cut(s) 27, 366, 714, 1156, 1489, 1572, 1887, 2318
DraI TTTAAA 1 cut(s) 1806
DraIII CACNNNGTG 1 cut(s) 1222
DrdI GACNNNNNNGTC 1 cut(s) 2144
DseDI GACNNNNNNGTC 1 cut(s) 2144
EaeI YGGCCR 1 cut(s) 1625
Eam1104I CTCTTC 8 cut(s) 475, 1019, 1563, 1656, 2196, 2244, 2343, 2418
EarI CTCTTC 8 cut(s) 475, 1019, 1563, 1656, 2196, 2244, 2343, 2418
Ecl136II GAGCTC 3 cut(s) 1012, 1060, 1504
Eco130I CCWWGG 1 cut(s) 2291
Eco24I GRGCYC 3 cut(s) 1014, 1062, 1506
Eco31I GGTCTC 2 cut(s) 679, 2152
Eco32I GATATC 1 cut(s) 223
Eco47I GGWCC 1 cut(s) 305
Eco53kI GAGCTC 3 cut(s) 1012, 1060, 1504
Eco57I CTGAAG 4 cut(s) 186, 453, 1371, 2156
Eco88I CYCGRG 1 cut(s) 1061
EcoICRI GAGCTC 3 cut(s) 1012, 1060, 1504
EcoO109I RGGNCCY 1 cut(s) 283
EcoRI GAATTC 1 cut(s) 233
EcoRII CCWGG 2 cut(s) 132, 1152
EcoRV GATATC 1 cut(s) 223
EcoT14I CCWWGG 1 cut(s) 2291
EcoT22I ATGCAT 2 cut(s) 1488, 2413
EcoT38I GRGCYC 3 cut(s) 1014, 1062, 1506
ErhI CCWWGG 1 cut(s) 2291
Esp3I CGTCTC 1 cut(s) 1853
FalI AAGNNNNNCTT 2 cut(s) 2714, 2746
FaqI GGGAC 3 cut(s) 1135, 2002, 2072
FauI CCCGC 1 cut(s) 2718
FauNDI CATATG 1 cut(s) 2413
FbaI TGATCA 2 cut(s) 366, 714
FblI GTMKAC 5 cut(s) 696, 1514, 1545, 2068, 2341
Fnu4HI GCNGC 3 cut(s) 775, 1214, 2551
FokI GGATG 8 cut(s) 152, 557, 595, 928, 1504, 1754, 2672, 2704
FriOI GRGCYC 3 cut(s) 1014, 1062, 1506
Fsp4HI GCNGC 3 cut(s) 775, 1214, 2551
FspBI CTAG 6 cut(s) 836, 1730, 1956, 2064, 2456, 2746
GlaI GCGC 2 cut(s) 1931, 1998
GluI GCNGC 3 cut(s) 775, 1214, 2551
GsuI CTGGAG 3 cut(s) 128, 155, 2513
HaeII RGCGCY 1 cut(s) 2000
HapII CCGG 4 cut(s) 1628, 1763, 2216, 2576
HgaI GACGC 1 cut(s) 1835
HhaI GCGC 2 cut(s) 1932, 1999
Hin1I GRCGYC 1 cut(s) 1846
Hin6I GCGC 2 cut(s) 1930, 1997
HinP1I GCGC 2 cut(s) 1930, 1997
HincII GTYRAC 3 cut(s) 94, 1515, 2163
HindII GTYRAC 3 cut(s) 94, 1515, 2163
HindIII AAGCTT 4 cut(s) 126, 744, 1180, 2255
HpaII CCGG 4 cut(s) 1628, 1763, 2216, 2576
HphI GGTGA 4 cut(s) 616, 2230, 2500, 2527
Hpy99I CGWCG 2 cut(s) 1553, 1587
HpyCH4III ACNGT 5 cut(s) 401, 565, 673, 2569, 2715
HpyCH4IV ACGT 1 cut(s) 2283
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 155, 1118, 1428, 1927, 2026
HpyF3I CTNAG 8 cut(s) 116, 808, 1056, 1241, 1884, 2093, 2315, 2673
HpySE526I ACGT 1 cut(s) 2283
Hsp92I GRCGYC 1 cut(s) 1846
HspAI GCGC 2 cut(s) 1930, 1997
Ksp22I TGATCA 2 cut(s) 366, 714
Kzo9I GATC 8 cut(s) 27, 366, 714, 1156, 1489, 1572, 1887, 2318
LguI GCTCTTC 1 cut(s) 1019
LmnI GCTCC 2 cut(s) 109, 708
Lsp1109I GCAGC 3 cut(s) 786, 1200, 2537
LweI GCATC 7 cut(s) 130, 201, 950, 1201, 1473, 2109, 2508
MaeI CTAG 6 cut(s) 836, 1730, 1956, 2064, 2456, 2746
MaeII ACGT 1 cut(s) 2283
MaeIII GTNAC 2 cut(s) 1378, 1434
MalI GATC 8 cut(s) 29, 368, 716, 1158, 1491, 1574, 1889, 2320
MboI GATC 8 cut(s) 27, 366, 714, 1156, 1489, 1572, 1887, 2318
MfeI CAATTG 2 cut(s) 1265, 2619
MflI RGATCY 1 cut(s) 1572
MhlI GDGCHC 4 cut(s) 975, 1014, 1062, 1506
MlyI GAGTC 5 cut(s) 277, 461, 1073, 1720, 2080
MmeI TCCRAC 2 cut(s) 969, 1076
Mph1103I ATGCAT 2 cut(s) 1488, 2413
MroXI GAANNNNTTC 4 cut(s) 128, 438, 1028, 2211
MspI CCGG 4 cut(s) 1628, 1763, 2216, 2576
MspR9I CCNGG 5 cut(s) 134, 1154, 1629, 1764, 2577
MunI CAATTG 2 cut(s) 1265, 2619
Mva1269I GAATGC 3 cut(s) 968, 1028, 2413
MvaI CCWGG 2 cut(s) 134, 1154
MvnI CGCG 1 cut(s) 303
MwoI GCNNNNNNNGC 6 cut(s) 11, 155, 1118, 1428, 1927, 2026
NciI CCSGG 3 cut(s) 1629, 1764, 2577
NdeI CATATG 1 cut(s) 2413
NdeII GATC 8 cut(s) 27, 366, 714, 1156, 1489, 1572, 1887, 2318
NlaIV GGNNCC 1 cut(s) 284
NmeAIII GCCGAG 1 cut(s) 1494
NmuCI GTSAC 1 cut(s) 1378
NsiI ATGCAT 2 cut(s) 1488, 2413
NspI RCATGY 4 cut(s) 250, 1435, 1675, 2705
NspV TTCGAA 3 cut(s) 1142, 2251, 2733
PaeR7I CTCGAG 1 cut(s) 1061
PciI ACATGT 3 cut(s) 246, 1671, 2701
PciSI GCTCTTC 1 cut(s) 1019
PctI GAATGC 3 cut(s) 968, 1028, 2413
PdmI GAANNNNTTC 4 cut(s) 128, 438, 1028, 2211
PfeI GAWTC 7 cut(s) 388, 1642, 1710, 1835, 2048, 2542, 2665
PflMI CCANNNNNTGG 1 cut(s) 1084
PfoI TCCNGGA 1 cut(s) 132
PkrI GCNGC 3 cut(s) 776, 1215, 2552
PleI GAGTC 5 cut(s) 276, 461, 1072, 1720, 2080
PpsI GAGTC 5 cut(s) 276, 461, 1072, 1720, 2080
PscI ACATGT 3 cut(s) 246, 1671, 2701
PsiI TTATAA 1 cut(s) 2639
Psp124BI GAGCTC 3 cut(s) 1014, 1062, 1506
Psp6I CCWGG 2 cut(s) 132, 1152
PspGI CCWGG 2 cut(s) 132, 1152
PspN4I GGNNCC 1 cut(s) 284
PspPI GGNCC 3 cut(s) 283, 305, 2578
PspXI VCTCGAGB 1 cut(s) 1061
PstNI CAGNNNCTG 1 cut(s) 988
PsuI RGATCY 1 cut(s) 1572
RsaI GTAC 1 cut(s) 2679
RsaNI GTAC 1 cut(s) 2678
SacI GAGCTC 3 cut(s) 1014, 1062, 1506
SalI GTCGAC 1 cut(s) 1513
SapI GCTCTTC 1 cut(s) 1019
SatI GCNGC 3 cut(s) 775, 1214, 2551
Sau3AI GATC 8 cut(s) 27, 366, 714, 1156, 1489, 1572, 1887, 2318
Sau96I GGNCC 3 cut(s) 283, 305, 2578
SchI GAGTC 5 cut(s) 277, 461, 1073, 1720, 2080
ScrFI CCNGG 5 cut(s) 134, 1154, 1629, 1764, 2577
SduI GDGCHC 4 cut(s) 975, 1014, 1062, 1506
SfaNI GCATC 7 cut(s) 130, 201, 950, 1201, 1473, 2109, 2508
SfcI CTRYAG 2 cut(s) 287, 690
Sfr274I CTCGAG 1 cut(s) 1061
SfuI TTCGAA 3 cut(s) 1142, 2251, 2733
SinI GGWCC 1 cut(s) 305
SlaI CTCGAG 1 cut(s) 1061
SmlI CTYRAG 3 cut(s) 50, 1061, 1789
SmoI CTYRAG 3 cut(s) 50, 1061, 1789
SpeI ACTAGT 1 cut(s) 2063
SsiI CCGC 7 cut(s) 303, 1018, 1174, 1852, 2243, 2437, 2725
SspI AATATT 1 cut(s) 2008
SspMI CTAG 6 cut(s) 836, 1730, 1956, 2064, 2456, 2746
SstI GAGCTC 3 cut(s) 1014, 1062, 1506
StyD4I CCNGG 5 cut(s) 132, 1152, 1627, 1762, 2575
StyI CCWWGG 1 cut(s) 2291
TaaI ACNGT 5 cut(s) 401, 565, 673, 2569, 2715
TaiI ACGT 1 cut(s) 2286
TfiI GAWTC 7 cut(s) 388, 1642, 1710, 1835, 2048, 2542, 2665
TscAI CASTG 4 cut(s) 1704, 2310, 2382, 2574
TseFI GTSAC 1 cut(s) 1378
TseI GCWGC 3 cut(s) 774, 1213, 2550
Tsp45I GTSAC 1 cut(s) 1378
TspGWI ACGGA 1 cut(s) 1415
TspRI CASTG 4 cut(s) 1704, 2310, 2382, 2574
Van91I CCANNNNNTGG 1 cut(s) 1084
VneI GTGCAC 1 cut(s) 971
VpaK11BI GGWCC 1 cut(s) 305
XapI RAATTY 8 cut(s) 233, 757, 978, 1801, 1969, 2208, 2467, 2476
XbaI TCTAGA 2 cut(s) 835, 1729
XceI RCATGY 4 cut(s) 250, 1435, 1675, 2705
XcmI CCANNNNNNNNNTGG 1 cut(s) 315
XhoI CTCGAG 1 cut(s) 1061
XmiI GTMKAC 5 cut(s) 696, 1514, 1545, 2068, 2341
XmnI GAANNNNTTC 4 cut(s) 128, 438, 1028, 2211
XspI CTAG 6 cut(s) 836, 1730, 1956, 2064, 2456, 2746
Zsp2I ATGCAT 2 cut(s) 1488, 2413
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.