MD06G1156200.v1.1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0000110
Physical Location & Seq
Forward (+)
29872898 .. 29874583
1686 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1156200.v1.1.491

Sequence Viewer

Length: 1686 bp
ATGGAGTCAGCTGCATCACTATTGATTGGGAAAATTGCGGCCATTCTTGAGAACGAAGCATCTTCCATAGCGGCAGTCCGTGATGAAGTTGATGAGCTTAAGCTGGAGCTCATAAGCATGAAATCTTTCTTAATAGATGCTGAAGGCAAGGAACCACAAACAGAAGGAGAGAGAACGTGGGTTACAAGCGTCAGAGATTTGACCTGCGATGCTGAAAATGTCATTGATGAGTTCCTGTATCACATATATGACAAGCAAAGTGCGACTCCATTTGCAAAATTGCTCCACAGAACCATTTACTTTCCAAAGAATCTTTGGCATCGGCATCGAATAGCCAAAAAATTACAGAAAATCACAAAAAAGATCGAAGCCATTCCAGAGAGGAATGAGAGATATGGTGTCTCTACAATAGAAGGAACAAGTTCGGATAGTGTTCCCAGATGGGTGAAGAACAAAGCCGAGTCTTCTCTTTATATTATGGAAGACGAACTAATCGGGATTGAAGACAAGAAGCAAACGTTAATGGGGTTATTGATGAATGGAAAGGAAAATGAAATGGTTGTGTCTGTGGTCGGGATGGGAGGATCAGGCAAGACAACTCTTGTTGCCAATACCTTCAACAACGAAAATGTAAAGCGACAATTTGACTGTTATGCATGGATCACTGTTTCTCAAACTTATGTGATTGAAGACTTATTCAAACAAATGATCAAGAAGTTCCACGAAGGAAGAAAGGAAGAGGTGCCTGAACATTTGAATTCCATGAGTTATGAAAATTTGTTAGATATGTTGTCGACATACTTGAAGTCTAAAAGGTACCTCGTTGTATTGGATGATGTGTGGGATATTAAACTTTGGCAAGAAATAATCATGCTTACAACACGAAAGAAAGACATAGCATTCTATTCTTTTGAAGTTGAAAGTCGTCCTTTTGAAATTGAACCTTTGGAAAACAATGAAGCTTGGGAGCTCTTTAGCAAGAAAGCATTCTCAAGTTATGATAACAAATCTTGTCCACCAGAGCTTGAATCATTAGCATGGAAACTTGTGGAAAAGTGTGAAGGCCTACCTCTGGCAGTGGTAACTTTAGGTGGTCTAATGTCTTCCAAGAGGTCATCATCGGAATGGAGAAGAGTATACAACAGCTTAAATTGGCACTTGACTAAGCATCCTATGCTAGAATCAATGAGCAGCATCTTGTTGCTTAGTTTCAACAATTTGCCCAACCCGTTGAAGCCATGTTTCCTATATTGTGCCCTTTTCCCAGAAGATTATCTCATCAGAAGAAAAAGGTTGATCAAGTTGTGGATAGCTGAAGGGCTTGTTGAACCAATTGATGGGGTCACACCAGAAGAAGTTGCAGAGGACTATCTTGTGGAACTTACTGGTCGTAGCATGCTACAAGTTGAATTAAGGAATGAAGCTGGAAGACCAAAAGCATGTAAGATGCATGATCTTATGCGTGAGCTTGCTTTGTCCACATCAAAAAATGAAAAGTTTGGTGCAACATATGTTGGCCGAGAAATAGTAGATAAAGCTGAAATCCGTCGATTGTCAATTCAAACAACTGAAGGGGAAATTAATTCTTGCACTGGTATGTCAGAGCTTCGCTCCTTTCTTGTCTTTGGCACGTTAAAGAAATTGCCTTCTGGATTCAAGTTGTTGATAGATTTCCAGATGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

562

Amino Acids

64.42

Weight (kDa)

5.74

Isoelectric Point (pI)

51.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 87 2.4e-20 Rx N-terminal domain
NB-ARC PF00931 168 - 332 2.2e-40 NB-ARC domain
WHD_DRP PF23559 420 - 491 1.2e-22 Disease resistance protein Winged helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 212
Acc65I GGTACC 1 cut(s) 816
AccB1I GGYRCC 2 cut(s) 742, 816
AccB7I CCANNNNNTGG 1 cut(s) 1337
AccI GTMKAC 2 cut(s) 794, 1137
AciI CCGC 2 cut(s) 38, 71
AclI AACGTT 1 cut(s) 518
AclWI GGATC 2 cut(s) 592, 668
AcoI YGGCCR 2 cut(s) 39, 1516
AcsI RAATTY 2 cut(s) 757, 775
AcuI CTGAAG 3 cut(s) 162, 1335, 1590
AfaI GTAC 1 cut(s) 818
AfiI CCNNNNNNNGG 2 cut(s) 1072, 1337
AflII CTTAAG 1 cut(s) 98
Alw21I GWGCWC 2 cut(s) 111, 972
Alw26I GTCTC 1 cut(s) 406
AlwI GGATC 2 cut(s) 592, 668
AoxI GGCC 3 cut(s) 39, 1063, 1516
ApeKI GCWGC 2 cut(s) 11, 1191
ApoI RAATTY 2 cut(s) 757, 775
AseI ATTAAT 1 cut(s) 1581
Asp700I GAANNNNTTC 4 cut(s) 125, 372, 421, 986
Asp718I GGTACC 1 cut(s) 816
AsuHPI GGTGA 1 cut(s) 457
BaeGI GKGCMC 1 cut(s) 1258
BanI GGYRCC 2 cut(s) 742, 816
BanII GRGCYC 2 cut(s) 111, 972
BbsI GAAGAC 6 cut(s) 456, 489, 510, 696, 1095, 1435
Bbv12I GWGCWC 2 cut(s) 111, 972
BbvI GCAGC 1 cut(s) 1203
BccI CCATC 3 cut(s) 435, 571, 1331
BcgI CGANNNNNNTGC 2 cut(s) 308, 342
BclI TGATCA 2 cut(s) 708, 1296
BcoDI GTCTC 1 cut(s) 406
BfaI CTAG 2 cut(s) 1178, 1684
BfrI CTTAAG 1 cut(s) 98
BfuAI ACCTGC 1 cut(s) 212
BisI GCNGC 4 cut(s) 12, 39, 72, 1192
BlsI GCNGC 4 cut(s) 13, 40, 73, 1193
BmiI GGNNCC 3 cut(s) 153, 744, 818
BmsI GCATC 9 cut(s) 23, 68, 127, 199, 328, 334, 1177, 1203, 1437
BpiI GAAGAC 6 cut(s) 456, 489, 510, 696, 1095, 1435
BplI GAGNNNNNCTC 2 cut(s) 1595, 1627
BpmI CTGGAG 1 cut(s) 125
BpuEI CTTGAG 2 cut(s) 68, 976
Bsc4I CCNNNNNNNGG 2 cut(s) 1072, 1337
Bse1I ACTGG 2 cut(s) 1390, 1597
BseGI GGATG 3 cut(s) 582, 838, 1168
BseLI CCNNNNNNNGG 2 cut(s) 1072, 1337
BseNI ACTGG 2 cut(s) 1390, 1597
BseSI GKGCMC 1 cut(s) 1258
BseXI GCAGC 1 cut(s) 1203
BshFI GGCC 3 cut(s) 41, 1065, 1518
BshNI GGYRCC 2 cut(s) 742, 816
BsiHKAI GWGCWC 2 cut(s) 111, 972
BslI CCNNNNNNNGG 2 cut(s) 1072, 1337
BsmAI GTCTC 1 cut(s) 406
BsmI GAATGC 2 cut(s) 899, 986
BsnI GGCC 3 cut(s) 41, 1065, 1518
Bsp1286I GDGCHC 3 cut(s) 111, 972, 1258
Bsp143I GATC 6 cut(s) 363, 584, 660, 708, 1296, 1453
BspACI CCGC 2 cut(s) 38, 71
BspANI GGCC 3 cut(s) 41, 1065, 1518
BspLI GGNNCC 3 cut(s) 153, 744, 818
BspMI ACCTGC 1 cut(s) 212
BspPI GGATC 2 cut(s) 592, 668
BspT107I GGYRCC 2 cut(s) 742, 816
BspTI CTTAAG 1 cut(s) 98
BsrI ACTGG 2 cut(s) 1390, 1597
BssMI GATC 6 cut(s) 363, 584, 660, 708, 1296, 1453
BssNAI GTATAC 1 cut(s) 1138
Bst1107I GTATAC 1 cut(s) 1138
Bst4CI ACNGT 2 cut(s) 650, 667
Bst6I CTCTTC 2 cut(s) 732, 1126
BstAFI CTTAAG 1 cut(s) 98
BstAPI GCANNNNNTGC 1 cut(s) 1174
BstC8I GCNNGC 2 cut(s) 1397, 1470
BstDEI CTNAG 2 cut(s) 1164, 1205
BstF5I GGATG 3 cut(s) 582, 838, 1168
BstKTI GATC 6 cut(s) 366, 587, 663, 711, 1299, 1456
BstMAI GTCTC 1 cut(s) 406
BstMBI GATC 6 cut(s) 363, 584, 660, 708, 1296, 1453
BstMWI GCNNNNNNNGC 1 cut(s) 1174
BstNSI RCATGY 2 cut(s) 1399, 1443
BstSLI GKGCMC 1 cut(s) 1258
BstV1I GCAGC 1 cut(s) 1203
BstV2I GAAGAC 6 cut(s) 456, 489, 510, 696, 1095, 1435
BstZ17I GTATAC 1 cut(s) 1138
BsuRI GGCC 3 cut(s) 41, 1065, 1518
BtgZI GCGATG 1 cut(s) 222
BtsCI GGATG 3 cut(s) 582, 838, 1168
BtsI GCAGTG 1 cut(s) 1083
BtsIMutI CAGTG 3 cut(s) 663, 1083, 1590
BveI ACCTGC 1 cut(s) 212
Cac8I GCNNGC 2 cut(s) 1397, 1470
CseI GACGC 1 cut(s) 178
Csp6I GTAC 1 cut(s) 817
CviAII CATG 9 cut(s) 118, 657, 763, 871, 1038, 1239, 1396, 1440, 1451
CviQI GTAC 1 cut(s) 817
DdeI CTNAG 2 cut(s) 1164, 1205
DpnI GATC 6 cut(s) 365, 586, 662, 710, 1298, 1455
DpnII GATC 6 cut(s) 363, 584, 660, 708, 1296, 1453
EaeI YGGCCR 2 cut(s) 39, 1516
Eam1104I CTCTTC 2 cut(s) 732, 1126
EarI CTCTTC 2 cut(s) 732, 1126
Ecl136II GAGCTC 2 cut(s) 109, 970
Eco147I AGGCCT 1 cut(s) 1065
Eco24I GRGCYC 2 cut(s) 111, 972
Eco53kI GAGCTC 2 cut(s) 109, 970
Eco57I CTGAAG 3 cut(s) 162, 1335, 1590
EcoICRI GAGCTC 2 cut(s) 109, 970
EcoRI GAATTC 1 cut(s) 757
EcoT22I ATGCAT 2 cut(s) 658, 1452
EcoT38I GRGCYC 2 cut(s) 111, 972
FaeI CATG 9 cut(s) 121, 660, 766, 874, 1041, 1242, 1399, 1443, 1454
FalI AAGNNNNNCTT 2 cut(s) 913, 945
FatI CATG 9 cut(s) 117, 656, 762, 870, 1037, 1238, 1395, 1439, 1450
FauNDI CATATG 1 cut(s) 1510
FbaI TGATCA 2 cut(s) 708, 1296
FblI GTMKAC 2 cut(s) 794, 1137
Fnu4HI GCNGC 4 cut(s) 12, 39, 72, 1192
FokI GGATG 3 cut(s) 589, 845, 1155
FriOI GRGCYC 2 cut(s) 111, 972
Fsp4HI GCNGC 4 cut(s) 12, 39, 72, 1192
FspBI CTAG 2 cut(s) 1178, 1684
GluI GCNGC 4 cut(s) 12, 39, 72, 1192
GsuI CTGGAG 1 cut(s) 125
HaeIII GGCC 3 cut(s) 41, 1065, 1518
HgaI GACGC 1 cut(s) 178
Hin1II CATG 9 cut(s) 121, 660, 766, 874, 1041, 1242, 1399, 1443, 1454
HincII GTYRAC 1 cut(s) 795
HindII GTYRAC 1 cut(s) 795
HindIII AAGCTT 1 cut(s) 960
HinfI GANTC 7 cut(s) 5, 265, 310, 461, 1028, 1181, 1653
HphI GGTGA 1 cut(s) 457
Hpy166II GTNNAC 4 cut(s) 795, 1016, 1138, 1479
Hpy188I TCNGA 5 cut(s) 194, 427, 1123, 1283, 1603
Hpy188III TCNNGA 7 cut(s) 47, 377, 496, 574, 712, 1650, 1675
Hpy8I GTNNAC 4 cut(s) 795, 1016, 1138, 1479
Hpy99I CGWCG 1 cut(s) 1551
HpyAV CCTTC 9 cut(s) 137, 158, 407, 625, 719, 1055, 1310, 1565, 1656
HpyCH4III ACNGT 2 cut(s) 650, 667
HpyCH4IV ACGT 3 cut(s) 176, 518, 1631
HpyCH4V TGCA 7 cut(s) 14, 275, 656, 1361, 1450, 1505, 1590
HpyF10VI GCNNNNNNNGC 1 cut(s) 1174
HpyF3I CTNAG 2 cut(s) 1164, 1205
HpySE526I ACGT 3 cut(s) 176, 518, 1631
Hsp92II CATG 9 cut(s) 121, 660, 766, 874, 1041, 1242, 1399, 1443, 1454
KpnI GGTACC 1 cut(s) 820
Ksp22I TGATCA 2 cut(s) 708, 1296
Kzo9I GATC 6 cut(s) 363, 584, 660, 708, 1296, 1453
LmnI GCTCC 4 cut(s) 106, 288, 967, 1616
Lsp1109I GCAGC 1 cut(s) 1203
LweI GCATC 9 cut(s) 23, 68, 127, 199, 328, 334, 1177, 1203, 1437
MaeI CTAG 2 cut(s) 1178, 1684
MaeII ACGT 3 cut(s) 176, 518, 1631
MaeIII GTNAC 3 cut(s) 181, 1081, 1342
MalI GATC 6 cut(s) 365, 586, 662, 710, 1298, 1455
MboI GATC 6 cut(s) 363, 584, 660, 708, 1296, 1453
MfeI CAATTG 1 cut(s) 1332
MhlI GDGCHC 3 cut(s) 111, 972, 1258
MlyI GAGTC 3 cut(s) 14, 259, 470
MnlI CCTC 7 cut(s) 375, 575, 733, 830, 1080, 1104, 1357
Mph1103I ATGCAT 2 cut(s) 658, 1452
MroXI GAANNNNTTC 4 cut(s) 125, 372, 421, 986
MseI TTAA 8 cut(s) 99, 131, 521, 849, 1148, 1412, 1581, 1634
MslI CAYNNNNRTG 5 cut(s) 116, 246, 1036, 1123, 1595
MspA1I CMGCKG 1 cut(s) 11
MspCI CTTAAG 1 cut(s) 98
MunI CAATTG 1 cut(s) 1332
Mva1269I GAATGC 2 cut(s) 899, 986
MwoI GCNNNNNNNGC 1 cut(s) 1174
NdeI CATATG 1 cut(s) 1510
NdeII GATC 6 cut(s) 363, 584, 660, 708, 1296, 1453
NlaIII CATG 9 cut(s) 121, 660, 766, 874, 1041, 1242, 1399, 1443, 1454
NlaIV GGNNCC 3 cut(s) 153, 744, 818
NmeAIII GCCGAG 2 cut(s) 484, 1544
NmuCI GTSAC 1 cut(s) 1342
NsiI ATGCAT 2 cut(s) 658, 1452
NspI RCATGY 2 cut(s) 1399, 1443
PaeI GCATGC 1 cut(s) 1399
PceI AGGCCT 1 cut(s) 1065
PctI GAATGC 2 cut(s) 899, 986
PdmI GAANNNNTTC 4 cut(s) 125, 372, 421, 986
PfeI GAWTC 4 cut(s) 310, 1028, 1181, 1653
PflMI CCANNNNNTGG 1 cut(s) 1337
PkrI GCNGC 4 cut(s) 13, 40, 73, 1193
PleI GAGTC 3 cut(s) 13, 259, 469
PpsI GAGTC 3 cut(s) 13, 259, 469
PshBI ATTAAT 1 cut(s) 1581
Psp124BI GAGCTC 2 cut(s) 111, 972
Psp1406I AACGTT 1 cut(s) 518
PspN4I GGNNCC 3 cut(s) 153, 744, 818
PsrI GAACNNNNNNTAC 2 cut(s) 166, 198
PvuII CAGCTG 1 cut(s) 11
RsaI GTAC 1 cut(s) 818
RsaNI GTAC 1 cut(s) 817
RseI CAYNNNNRTG 5 cut(s) 116, 246, 1036, 1123, 1595
SacI GAGCTC 2 cut(s) 111, 972
SalI GTCGAC 1 cut(s) 793
SaqAI TTAA 8 cut(s) 99, 131, 521, 849, 1148, 1412, 1581, 1634
SatI GCNGC 4 cut(s) 12, 39, 72, 1192
Sau3AI GATC 6 cut(s) 363, 584, 660, 708, 1296, 1453
SchI GAGTC 3 cut(s) 14, 259, 470
SduI GDGCHC 3 cut(s) 111, 972, 1258
SfaNI GCATC 9 cut(s) 23, 68, 127, 199, 328, 334, 1177, 1203, 1437
SmiMI CAYNNNNRTG 5 cut(s) 116, 246, 1036, 1123, 1595
SmlI CTYRAG 3 cut(s) 47, 98, 991
SmoI CTYRAG 3 cut(s) 47, 98, 991
SphI GCATGC 1 cut(s) 1399
SseBI AGGCCT 1 cut(s) 1065
SsiI CCGC 2 cut(s) 38, 71
SspMI CTAG 2 cut(s) 1178, 1684
SstI GAGCTC 2 cut(s) 111, 972
StuI AGGCCT 1 cut(s) 1065
TaaI ACNGT 2 cut(s) 650, 667
TaiI ACGT 3 cut(s) 179, 521, 1634
TaqI TCGA 4 cut(s) 328, 366, 794, 1549
TauI GCSGC 2 cut(s) 41, 74
TfiI GAWTC 4 cut(s) 310, 1028, 1181, 1653
Tru1I TTAA 8 cut(s) 99, 131, 521, 849, 1148, 1412, 1581, 1634
Tru9I TTAA 8 cut(s) 99, 131, 521, 849, 1148, 1412, 1581, 1634
TscAI CASTG 3 cut(s) 670, 1083, 1597
TseFI GTSAC 1 cut(s) 1342
TseI GCWGC 2 cut(s) 11, 1191
Tsp45I GTSAC 1 cut(s) 1342
TspDTI ATGAA 8 cut(s) 99, 134, 551, 567, 786, 972, 1434, 1506
TspGWI ACGGA 2 cut(s) 68, 1535
TspRI CASTG 3 cut(s) 670, 1083, 1597
Van91I CCANNNNNTGG 1 cut(s) 1337
Vha464I CTTAAG 1 cut(s) 98
VspI ATTAAT 1 cut(s) 1581
XapI RAATTY 2 cut(s) 757, 775
XceI RCATGY 2 cut(s) 1399, 1443
XcmI CCANNNNNNNNNTGG 1 cut(s) 312
XmiI GTMKAC 2 cut(s) 794, 1137
XmnI GAANNNNTTC 4 cut(s) 125, 372, 421, 986
XspI CTAG 2 cut(s) 1178, 1684
Zsp2I ATGCAT 2 cut(s) 658, 1452
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.