RchiOBHm_Chr2g0101661

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000110
Physical Location & Seq
Forward (+)
13186978 .. 13190047
3070 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47622

Sequence Viewer

Length: 1410 bp
ATGTTAATGGGATGGTTGATCAATGGAGAGAAAAAACAAACTATTGTCTCTGTGGTCGGCATGGGAGGATCAGGGAAGACAACTCTCGTTGCCAACACCTTCACTCAGGAGACGGAATTCCACCAATCAATCAAACAGGAAGTCCCTGGGAATTTGCATGCAATGAGCTACAGAGAATTGCTGGAGATGTTGACAAACTTTTTGTTGTCCAAAAGATATCTAGTTGTATTGGATGACGTGTGGGATATCACTCTTTGGGAAAATATAAGATTATCATTTCCAGATGAACAGATTGGAAGTCGAATCATTCTTAAAACTCGAAGAGAAGACATAGCATCCTGTTCTTTTGGAGTTGAAAGTCATGTTTACCCTATTCAACTCTTGCAACGCGATGAGGCCATGGAGTTCTTCAGCAAGAAAGCATTCCCAACTTATCTCAATATATGCCCGCCAGAGCTCGAACCATTAGCTTGGGAACTTGTGGAGAAGTGCAACGGCTTACCTCTGGCAATTGTGGCTTTACGTGGCCTCATGTCCTCAAAAAAGTCTTCTGTAGAGTGGAGGGTTACACCAGAAGCAGTTGCAGAACTCTATATTATGGAACTCGTTTCTCGTAGCATGCTACAAGCTGTAAGAAGAAATGAAACCGGAAGGCCAAGGGCATGCAAGATGCATGATCTTATGCGGGAGCTTGCTTTATCAGAATCAGAATCGGAGAACTTTGCCACTGTGTACAATGGCAAAGAAGTAATGAAAGAAATGGGAGCCCGTCGTTTGTCAATTCAAACAACGGATGGGGAAATTAAGCCACTCACAGATATGTCACATCTTCGTTCTTTTCTTGTCTTTGTCACTAATAGAATCTCATCGTCTGTTTCTGAGATATTGCCTTCTGGATTGAAGTTGTTGAGGATTCTAGATTTGGAACGGTCCCGGTTAATTACTAAATTATTGCCTGATGAAGTTGTGTACTTATTCAACTTAAGATATTTAAATTTGAGGAAAACTCCCATTAAAGAGCTTCCCAAATCCATAGGACGGCTCCACAATCTCCAGACCTTGGACATAAGGGATTCCAATATAAAGGCACTTCCAAGGGGAATTACCAAGCTGCTTAACCTACGCCATCTGATTATGTACCGTTACACTGGAGTACATATGGGCTTCAGATATATTGAAGGGACAAAAGGTCCTTCTGGTATTTGTAAGTTGAAGAACTTGCAAGTTTTGGCATGTGTTGAATTAGAAGGAAATGTTATCAGACTTGTCAGGAACATGACCCAACTCACTAAGCTTGGCATCACAAATGTAAAAGAAAGAGACGAGATAGACCTATGTGCTTCATTTCAAAAGATGGAGCTCCTCCAGGACTTGTTTTTAATGGTACCTGATGAAGAGGAATGTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

469

Amino Acids

53.67

Weight (kDa)

8.3

Isoelectric Point (pI)

48.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 37 - 144 8.2e-22 NB-ARC domain
WHD_DRP PF23559 190 - 232 6.4e-10 Disease resistance protein Winged helix domain
LRR_14 PF23598 276 - 461 1.7e-28 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07040
fragaria_vesca FvH4_2g00960 FvH4_2g14930 FvH4_3g11470 FvH4_3g11471 FvH4_3g11481 FvH4_3g11501 FvH4_3g11502 FvH4_3g11503 FvH4_3g11503 FvH4_3g11503 FvH4_3g11504 FvH4_3g11505 FvH4_3g17400 FvH4_3g17401 FvH4_6g29690
malus_domestica MD00G1206000.v1.1 MD00G1207600.v1.1 MD00G1207700.v1.1 MD00G1207800.v1.1 MD05G1008300.v1.1 MD05G1008400.v1.1 MD05G1024900.v1.1 MD05G1025200.v1.1 MD06G1152000.v1.1 MD06G1152400.v1.1 MD06G1152500.v1.1 MD06G1152800.v1.1 MD06G1153100.v1.1 MD06G1153200.v1.1 MD06G1153300.v1.1 MD06G1153700.v1.1 MD06G1154100.v1.1 MD06G1154600.v1.1 MD06G1155300.v1.1 MD06G1155600.v1.1 MD06G1155800.v1.1 MD06G1156200.v1.1 MD06G1156300.v1.1 MD06G1156900.v1.1 MD06G1157000.v1.1 MD10G1003800.v1.1 MD15G1390600.v1.1
prunus_persica Prupe.6G146200_v2.0.a1 Prupe.6G146400_v2.0.a1 Prupe.6G194900_v2.0.a1 Prupe.6G199100_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199400_v2.0.a1 Prupe.6G199500_v2.0.a1 Prupe.6G199700_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G199800_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200200_v2.0.a1 Prupe.6G200400_v2.0.a1 Prupe.6G200600_v2.0.a1 Prupe.6G200900_v2.0.a1 Prupe.6G201100_v2.0.a1 Prupe.8G007600_v2.0.a1 Prupe.8G008500_v2.0.a1 Prupe.8G008600_v2.0.a1 Prupe.8G008700_v2.0.a1 Prupe.8G008900_v2.0.a1 Prupe.8G009000_v2.0.a1 Prupe.8G009300_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009400_v2.0.a1 Prupe.8G009500_v2.0.a1 Prupe.8G009600_v2.0.a1 Prupe.8G009700_v2.0.a1 Prupe.8G010000_v2.0.a1 Prupe.8G010200_v2.0.a1 Prupe.8G010600_v2.0.a1 Prupe.8G010700_v2.0.a1
pyrus_communis pycom05g00420 pycom05g01590 pycom05g01610 pycom05g01640 pycom06g14010 pycom06g14020 pycom06g14050 pycom10g00310 pycom15g34970
rosa_chinensis RchiOBHm_Chr1g0339061 RchiOBHm_Chr1g0348041 RchiOBHm_Chr2g0101551 RchiOBHm_Chr2g0101661 RchiOBHm_Chr2g0135281 RchiOBHm_Chr2g0135361 RchiOBHm_Chr2g0135381 RchiOBHm_Chr4g0410551 RchiOBHm_Chr5g0015461 RchiOBHm_Chr5g0018151 RchiOBHm_Chr5g0018401 RchiOBHm_Chr5g0018431 RchiOBHm_Chr5g0018441 RchiOBHm_Chr5g0018451 RchiOBHm_Chr5g0018461 RchiOBHm_Chr5g0052641 RchiOBHm_Chr5g0052661 RchiOBHm_Chr5g0052681 RchiOBHm_Chr5g0052691 RchiOBHm_Chr5g0052731 RchiOBHm_Chr6g0274421 RchiOBHm_Chr6g0277541 RchiOBHm_Chr6g0278191 RchiOBHm_Chr6g0278241
rosa_laevigata RLG00000013544 RLG00000014183 RLG00000017089 RLG00000019459 RLG00000019460 RLG00000032362 RLG00000032363 RLG00000032367
rosa_multiflora Rmu_co8364011.1_g000001 Rmu_co8390397.1_g000001 Rmu_sc0000694.1_g000010 Rmu_sc0000694.1_g000011 Rmu_sc0000958.1_g000006 Rmu_sc0001289.1_g000014 Rmu_sc0001382.1_g000019 Rmu_sc0002197.1_g000002 Rmu_sc0002197.1_g000036 Rmu_sc0002311.1_g000024 Rmu_sc0003835.1_g000020 Rmu_sc0003910.1_g000007 Rmu_sc0004464.1_g000013 Rmu_sc0006594.1_g000002 Rmu_sc0006594.1_g000011 Rmu_sc0010265.1_g000015 Rmu_sc0010265.1_g000019 Rmu_sc0013020.1_g000002 Rmu_sc0017459.1_g000009 Rmu_sc0034280.1_g000001 Rmu_ssc0000187.1_g000004 Rmu_ssc0000187.1_g000015 Rmu_ssc0000187.1_g000022 Rmu_ssc0000263.1_g000008
rosa_roxburghii Rroxscaffold_1G00028510 Rroxscaffold_1G00059270 Rroxscaffold_1G00059340 Rroxscaffold_1G00061030 Rroxscaffold_2G00109280 Rroxscaffold_2G00109320 Rroxscaffold_2G00141200 Rroxscaffold_4G00307310 Rroxscaffold_7G00191240 Rroxscaffold_7G00194240
rosa_rugosa Rorug01G0190800 Rorug02G0097500 Rorug02G0097600 Rorug02G0324500 Rorug02G0324600 Rorug03G0114500 Rorug05G0042600.1 Rorug05G0043300 Rorug05G0043400 Rorug05G0043600 Rorug05G0043600 Rorug05G0043800 Rorug05G0043900 Rorug05G0044100 Rorug05G0044300 Rorug05G0502000 Rorug05G0502100 Rorug05G0502200 Rorug05G0502300 Rorug05G0502400 Rorug06G0037200 Rorug06G0081600 Rorug06G0115000 Rorug06G0115100
rosa_samantha Rh1AG209400 Rh1BG174400 Rh1CG193800 Rh1DG140600 Rh2BG153300 Rh2BG381100 Rh2BG381200 Rh2BG381400 Rh2BG381500 Rh2BG381700 Rh2CG153800 Rh2CG360300 Rh2DG153600 Rh2DG397500 Rh2DG397800 Rh2DG398000 Rh4AG161500 Rh4BG162800 Rh4CG173900 Rh4CG175800 Rh5AG121200 Rh5AG121300 Rh5AG343200 Rh5AG343500 Rh5BG120100 Rh5BG132000 Rh5BG132100 Rh5BG134200 Rh5BG353100 Rh5BG353200 Rh5BG353400 Rh5BG353600 Rh5BG353700 Rh5BG353900 Rh5CG144300 Rh5CG145900 Rh5CG146200 Rh5CG146300 Rh5CG146400 Rh6AG011300 Rh6AG011400 Rh6AG197600 Rh6AG219900 Rh6BG010200 Rh6BG010300 Rh6BG201400 Rh6BG223800 Rh6DG222800 Rh6DG223000
rosa_wichuraiana Rw1G017450 Rw2G011530 Rw2G030640 Rw2G030650 Rw5G010460 Rw5G011650 Rw5G011860 Rw5G011900 Rw5G011920 Rw5G011970 Rw5G011980 Rw5G012000 Rw5G032280 Rw5G032330 Rw5G032450 Rw6G001330 Rw6G017220 Rw6G019250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1384
AccB1I GGYRCC 1 cut(s) 1384
AccB7I CCANNNNNTGG 1 cut(s) 1060
AccII CGCG 1 cut(s) 390
AciI CCGC 2 cut(s) 449, 685
AclWI GGATC 1 cut(s) 76
AcsI RAATTY 3 cut(s) 116, 151, 994
AcuI CTGAAG 2 cut(s) 394, 1150
AfaI GTAC 5 cut(s) 734, 971, 1139, 1155, 1386
AfiI CCNNNNNNNGG 2 cut(s) 1038, 1060
AflII CTTAAG 1 cut(s) 982
AflIII ACRYGT 1 cut(s) 237
AgsI TTSAA 9 cut(s) 356, 377, 785, 901, 979, 1178, 1213, 1241, 1349
AhdI GACNNNNNGTC 1 cut(s) 1188
AjiI CACGTC 1 cut(s) 238
AjnI CCWGG 2 cut(s) 145, 1365
AluBI AGCT 9 cut(s) 168, 457, 470, 629, 691, 1021, 1111, 1294, 1360
AluI AGCT 9 cut(s) 168, 457, 470, 629, 691, 1021, 1111, 1294, 1360
Alw21I GWGCWC 2 cut(s) 459, 1362
Alw26I GTCTC 3 cut(s) 52, 104, 1314
AlwI GGATC 1 cut(s) 76
AoxI GGCC 3 cut(s) 396, 526, 653
ApeKI GCWGC 1 cut(s) 1111
ApoI RAATTY 3 cut(s) 116, 151, 994
ArsI GACNNNNNNTTYG 4 cut(s) 126, 158, 184, 216
Asp700I GAANNNNTTC 1 cut(s) 422
Asp718I GGTACC 1 cut(s) 1384
AspS9I GGNCC 2 cut(s) 930, 1190
AsuC2I CCSGG 1 cut(s) 934
AvaII GGWCC 2 cut(s) 930, 1190
BanI GGYRCC 1 cut(s) 1384
BanII GRGCYC 3 cut(s) 459, 769, 1362
BbsI GAAGAC 3 cut(s) 83, 333, 540
Bbv12I GWGCWC 2 cut(s) 459, 1362
BbvI GCAGC 1 cut(s) 1098
BccI CCATC 4 cut(s) 6, 788, 1134, 1348
BceAI ACGGC 2 cut(s) 511, 1055
BciT130I CCWGG 2 cut(s) 147, 1367
BclI TGATCA 1 cut(s) 18
BcnI CCSGG 1 cut(s) 934
BcoDI GTCTC 3 cut(s) 52, 104, 1314
BfaI CTAG 2 cut(s) 221, 917
BfmI CTRYAG 2 cut(s) 169, 552
BfrI CTTAAG 1 cut(s) 982
BisI GCNGC 1 cut(s) 1112
BlsI GCNGC 1 cut(s) 1113
Bme1390I CCNGG 3 cut(s) 147, 934, 1367
Bme18I GGWCC 2 cut(s) 930, 1190
BmeRI GACNNNNNGTC 1 cut(s) 1188
BmgBI CACGTC 1 cut(s) 238
BmgT120I GGNCC 2 cut(s) 930, 1190
BmiI GGNNCC 4 cut(s) 766, 932, 1043, 1386
BmrFI CCNGG 3 cut(s) 147, 934, 1367
BmsI GCATC 3 cut(s) 344, 660, 1308
BpiI GAAGAC 3 cut(s) 83, 333, 540
BplI GAGNNNNNCTC 2 cut(s) 991, 1023
BpmI CTGGAG 4 cut(s) 203, 1037, 1170, 1349
BpuMI CCSGG 1 cut(s) 934
BsaAI YACGTR 1 cut(s) 524
BsaJI CCNNGG 6 cut(s) 145, 146, 399, 656, 1059, 1094
BsaWI WCCGGW 1 cut(s) 647
Bsc4I CCNNNNNNNGG 2 cut(s) 1038, 1060
Bse1I ACTGG 1 cut(s) 1153
Bse3DI GCAATG 1 cut(s) 168
BseBI CCWGG 2 cut(s) 147, 1367
BseDI CCNNGG 6 cut(s) 145, 146, 399, 656, 1059, 1094
BseGI GGATG 4 cut(s) 17, 238, 335, 799
BseLI CCNNNNNNNGG 2 cut(s) 1038, 1060
BseMI GCAATG 1 cut(s) 168
BseMII CTCAG 2 cut(s) 119, 870
BseNI ACTGG 1 cut(s) 1153
BseRI GAGGAG 1 cut(s) 1352
BseXI GCAGC 1 cut(s) 1098
Bsh1236I CGCG 1 cut(s) 390
BshFI GGCC 3 cut(s) 398, 528, 655
BshNI GGYRCC 1 cut(s) 1384
BsiHKAI GWGCWC 2 cut(s) 459, 1362
BsiSI CCGG 2 cut(s) 648, 934
BslFI GGGAC 3 cut(s) 128, 916, 1195
BslI CCNNNNNNNGG 2 cut(s) 1038, 1060
BsmAI GTCTC 3 cut(s) 52, 104, 1314
BsmBI CGTCTC 2 cut(s) 104, 1314
BsmFI GGGAC 3 cut(s) 128, 916, 1195
BsmI GAATGC 1 cut(s) 422
BsnI GGCC 3 cut(s) 398, 528, 655
Bsp1286I GDGCHC 3 cut(s) 459, 769, 1362
Bsp1407I TGTACA 1 cut(s) 732
Bsp143I GATC 3 cut(s) 18, 68, 676
Bsp19I CCATGG 1 cut(s) 399
BspACI CCGC 2 cut(s) 449, 685
BspANI GGCC 3 cut(s) 398, 528, 655
BspCNI CTCAG 2 cut(s) 118, 871
BspFNI CGCG 1 cut(s) 390
BspLI GGNNCC 4 cut(s) 766, 932, 1043, 1386
BspPI GGATC 1 cut(s) 76
BspT107I GGYRCC 1 cut(s) 1384
BspTI CTTAAG 1 cut(s) 982
BsrDI GCAATG 1 cut(s) 168
BsrGI TGTACA 1 cut(s) 732
BsrI ACTGG 1 cut(s) 1153
BssECI CCNNGG 6 cut(s) 145, 146, 399, 656, 1059, 1094
BssMI GATC 3 cut(s) 18, 68, 676
BssT1I CCWWGG 4 cut(s) 399, 656, 1059, 1094
Bst2UI CCWGG 2 cut(s) 147, 1367
Bst4CI ACNGT 3 cut(s) 730, 930, 1142
Bst6I CTCTTC 2 cut(s) 316, 1389
BstAFI CTTAAG 1 cut(s) 982
BstAUI TGTACA 1 cut(s) 732
BstBAI YACGTR 1 cut(s) 524
BstC8I GCNNGC 5 cut(s) 159, 449, 620, 664, 693
BstDEI CTNAG 3 cut(s) 105, 879, 1290
BstDSI CCRYGG 1 cut(s) 399
BstF5I GGATG 4 cut(s) 17, 238, 335, 799
BstFNI CGCG 1 cut(s) 390
BstKTI GATC 3 cut(s) 21, 71, 679
BstMAI GTCTC 3 cut(s) 52, 104, 1314
BstMBI GATC 3 cut(s) 18, 68, 676
BstMWI GCNNNNNNNGC 1 cut(s) 515
BstNI CCWGG 2 cut(s) 147, 1367
BstNSI RCATGY 4 cut(s) 161, 622, 666, 1236
BstSCI CCNGG 3 cut(s) 145, 932, 1365
BstSFI CTRYAG 2 cut(s) 169, 552
BstUI CGCG 1 cut(s) 390
BstV1I GCAGC 1 cut(s) 1098
BstV2I GAAGAC 3 cut(s) 83, 333, 540
BstXI CCANNNNNNTGG 1 cut(s) 471
BsuRI GGCC 3 cut(s) 398, 528, 655
BtgI CCRYGG 1 cut(s) 399
BtgZI GCGATG 1 cut(s) 405
BtrI CACGTC 1 cut(s) 238
BtsCI GGATG 4 cut(s) 17, 238, 335, 799
BtsIMutI CAGTG 2 cut(s) 726, 1146
Cac8I GCNNGC 5 cut(s) 159, 449, 620, 664, 693
Cfr13I GGNCC 2 cut(s) 930, 1190
Csp6I GTAC 5 cut(s) 733, 970, 1138, 1154, 1385
CviQI GTAC 5 cut(s) 733, 970, 1138, 1154, 1385
DdeI CTNAG 3 cut(s) 105, 879, 1290
DpnI GATC 3 cut(s) 20, 70, 678
DpnII GATC 3 cut(s) 18, 68, 676
DraI TTTAAA 1 cut(s) 993
DriI GACNNNNNGTC 1 cut(s) 1188
Eam1104I CTCTTC 2 cut(s) 316, 1389
Eam1105I GACNNNNNGTC 1 cut(s) 1188
EarI CTCTTC 2 cut(s) 316, 1389
Ecl136II GAGCTC 2 cut(s) 457, 1360
Eco130I CCWWGG 4 cut(s) 399, 656, 1059, 1094
Eco24I GRGCYC 3 cut(s) 459, 769, 1362
Eco32I GATATC 2 cut(s) 218, 247
Eco47I GGWCC 2 cut(s) 930, 1190
Eco53kI GAGCTC 2 cut(s) 457, 1360
Eco57I CTGAAG 2 cut(s) 394, 1150
EcoICRI GAGCTC 2 cut(s) 457, 1360
EcoO109I RGGNCCY 1 cut(s) 1190
EcoRI GAATTC 1 cut(s) 116
EcoRII CCWGG 2 cut(s) 145, 1365
EcoRV GATATC 2 cut(s) 218, 247
EcoT14I CCWWGG 4 cut(s) 399, 656, 1059, 1094
EcoT22I ATGCAT 1 cut(s) 675
EcoT38I GRGCYC 3 cut(s) 459, 769, 1362
ErhI CCWWGG 4 cut(s) 399, 656, 1059, 1094
Esp3I CGTCTC 2 cut(s) 104, 1314
FaqI GGGAC 3 cut(s) 128, 916, 1195
FauI CCCGC 2 cut(s) 456, 678
FauNDI CATATG 1 cut(s) 1158
FbaI TGATCA 1 cut(s) 18
Fnu4HI GCNGC 1 cut(s) 1112
FokI GGATG 4 cut(s) 24, 245, 322, 806
FriOI GRGCYC 3 cut(s) 459, 769, 1362
Fsp4HI GCNGC 1 cut(s) 1112
FspBI CTAG 2 cut(s) 221, 917
GluI GCNGC 1 cut(s) 1112
GsuI CTGGAG 4 cut(s) 203, 1037, 1170, 1349
HaeIII GGCC 3 cut(s) 398, 528, 655
HapII CCGG 2 cut(s) 648, 934
HincII GTYRAC 1 cut(s) 192
HindII GTYRAC 1 cut(s) 192
HindIII AAGCTT 1 cut(s) 1292
HinfI GANTC 6 cut(s) 303, 704, 710, 861, 913, 1073
HpaII CCGG 2 cut(s) 648, 934
Hpy166II GTNNAC 4 cut(s) 192, 367, 733, 970
Hpy188I TCNGA 7 cut(s) 703, 709, 715, 880, 1131, 1169, 1262
Hpy188III TCNNGA 6 cut(s) 107, 281, 894, 917, 1054, 1270
Hpy8I GTNNAC 4 cut(s) 192, 367, 733, 970
Hpy99I CGWCG 1 cut(s) 774
HpyAV CCTTC 6 cut(s) 109, 645, 900, 1172, 1203, 1241
HpyCH4III ACNGT 3 cut(s) 730, 930, 1142
HpyCH4IV ACGT 2 cut(s) 237, 523
HpyCH4V TGCA 8 cut(s) 157, 161, 385, 492, 584, 666, 673, 1222
HpyF10VI GCNNNNNNNGC 1 cut(s) 515
HpyF3I CTNAG 3 cut(s) 105, 879, 1290
HpySE526I ACGT 2 cut(s) 237, 523
KpnI GGTACC 1 cut(s) 1388
Ksp22I TGATCA 1 cut(s) 18
Kzo9I GATC 3 cut(s) 18, 68, 676
LmnI GCTCC 5 cut(s) 688, 764, 1047, 1357, 1365
Lsp1109I GCAGC 1 cut(s) 1098
LweI GCATC 3 cut(s) 344, 660, 1308
MaeI CTAG 2 cut(s) 221, 917
MaeII ACGT 2 cut(s) 237, 523
MaeIII GTNAC 4 cut(s) 565, 822, 850, 1142
MalI GATC 3 cut(s) 20, 70, 678
MboI GATC 3 cut(s) 18, 68, 676
MboII GAAGA 9 cut(s) 88, 333, 338, 400, 540, 648, 821, 1225, 1406
MfeI CAATTG 1 cut(s) 510
MhlI GDGCHC 3 cut(s) 459, 769, 1362
Mph1103I ATGCAT 1 cut(s) 675
MroXI GAANNNNTTC 1 cut(s) 422
MseI TTAA 9 cut(s) 5, 312, 804, 938, 983, 992, 1014, 1116, 1379
MslI CAYNNNNRTG 1 cut(s) 818
MspCI CTTAAG 1 cut(s) 982
MspI CCGG 2 cut(s) 648, 934
MspR9I CCNGG 3 cut(s) 147, 934, 1367
MunI CAATTG 1 cut(s) 510
Mva1269I GAATGC 1 cut(s) 422
MvaI CCWGG 2 cut(s) 147, 1367
MvnI CGCG 1 cut(s) 390
MwoI GCNNNNNNNGC 1 cut(s) 515
NciI CCSGG 1 cut(s) 934
NcoI CCATGG 1 cut(s) 399
NdeI CATATG 1 cut(s) 1158
NdeII GATC 3 cut(s) 18, 68, 676
NlaIV GGNNCC 4 cut(s) 766, 932, 1043, 1386
NmuCI GTSAC 2 cut(s) 822, 850
NsiI ATGCAT 1 cut(s) 675
NspI RCATGY 4 cut(s) 161, 622, 666, 1236
PaeI GCATGC 3 cut(s) 161, 622, 666
PasI CCCWGGG 1 cut(s) 146
PctI GAATGC 1 cut(s) 422
PdmI GAANNNNTTC 1 cut(s) 422
PfeI GAWTC 6 cut(s) 303, 704, 710, 861, 913, 1073
PflMI CCANNNNNTGG 1 cut(s) 1060
PfoI TCCNGGA 1 cut(s) 1365
PkrI GCNGC 1 cut(s) 1113
Ppu21I YACGTR 1 cut(s) 524
PpuMI RGGWCCY 1 cut(s) 1190
Psp124BI GAGCTC 2 cut(s) 459, 1362
Psp5II RGGWCCY 1 cut(s) 1190
Psp6I CCWGG 2 cut(s) 145, 1365
PspGI CCWGG 2 cut(s) 145, 1365
PspN4I GGNNCC 4 cut(s) 766, 932, 1043, 1386
PspPI GGNCC 2 cut(s) 930, 1190
PspPPI RGGWCCY 1 cut(s) 1190
RsaI GTAC 5 cut(s) 734, 971, 1139, 1155, 1386
RsaNI GTAC 5 cut(s) 733, 970, 1138, 1154, 1385
RseI CAYNNNNRTG 1 cut(s) 818
SacI GAGCTC 2 cut(s) 459, 1362
SaqAI TTAA 9 cut(s) 5, 312, 804, 938, 983, 992, 1014, 1116, 1379
SatI GCNGC 1 cut(s) 1112
Sau3AI GATC 3 cut(s) 18, 68, 676
Sau96I GGNCC 2 cut(s) 930, 1190
ScrFI CCNGG 3 cut(s) 147, 934, 1367
SduI GDGCHC 3 cut(s) 459, 769, 1362
SfaNI GCATC 3 cut(s) 344, 660, 1308
SfcI CTRYAG 2 cut(s) 169, 552
SinI GGWCC 2 cut(s) 930, 1190
SmiI ATTTAAAT 1 cut(s) 993
SmiMI CAYNNNNRTG 1 cut(s) 818
SmlI CTYRAG 1 cut(s) 982
SmoI CTYRAG 1 cut(s) 982
SphI GCATGC 3 cut(s) 161, 622, 666
SsiI CCGC 2 cut(s) 449, 685
SspMI CTAG 2 cut(s) 221, 917
SstI GAGCTC 2 cut(s) 459, 1362
StyD4I CCNGG 3 cut(s) 145, 932, 1365
StyI CCWWGG 4 cut(s) 399, 656, 1059, 1094
SwaI ATTTAAAT 1 cut(s) 993
TaaI ACNGT 3 cut(s) 730, 930, 1142
TaiI ACGT 2 cut(s) 240, 526
TaqI TCGA 3 cut(s) 301, 319, 459
TatI WGTACW 3 cut(s) 732, 969, 1153
TfiI GAWTC 6 cut(s) 303, 704, 710, 861, 913, 1073
Tru1I TTAA 9 cut(s) 5, 312, 804, 938, 983, 992, 1014, 1116, 1379
Tru9I TTAA 9 cut(s) 5, 312, 804, 938, 983, 992, 1014, 1116, 1379
TscAI CASTG 2 cut(s) 733, 1153
TseFI GTSAC 2 cut(s) 822, 850
TseI GCWGC 1 cut(s) 1111
Tsp45I GTSAC 2 cut(s) 822, 850
TspDTI ATGAA 6 cut(s) 300, 657, 767, 975, 1332, 1407
TspGWI ACGGA 2 cut(s) 128, 806
TspRI CASTG 2 cut(s) 733, 1153
Van91I CCANNNNNTGG 1 cut(s) 1060
Vha464I CTTAAG 1 cut(s) 982
VpaK11BI GGWCC 2 cut(s) 930, 1190
XapI RAATTY 3 cut(s) 116, 151, 994
XbaI TCTAGA 1 cut(s) 916
XceI RCATGY 4 cut(s) 161, 622, 666, 1236
XmnI GAANNNNTTC 1 cut(s) 422
XspI CTAG 2 cut(s) 221, 917
Zsp2I ATGCAT 1 cut(s) 675
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.